BLASTX nr result
ID: Ephedra25_contig00007063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00007063
(1029 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX92591.1| Transcription elongation factor (TFIIS) family pr... 65 6e-08
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 64 1e-07
gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus pe... 63 2e-07
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 63 2e-07
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr... 62 3e-07
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 62 5e-07
ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymera... 62 5e-07
gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus... 61 6e-07
ref|XP_004288319.1| PREDICTED: probable mediator of RNA polymera... 61 6e-07
gb|ESW31798.1| hypothetical protein PHAVU_002G268700g [Phaseolus... 60 1e-06
ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymera... 60 1e-06
ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymera... 60 1e-06
ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832... 60 1e-06
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260... 59 2e-06
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260... 59 2e-06
emb|CBI37628.3| unnamed protein product [Vitis vinifera] 59 2e-06
ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymera... 59 3e-06
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr... 58 5e-06
ref|XP_002442867.1| hypothetical protein SORBIDRAFT_08g004100 [S... 58 5e-06
gb|ABA95891.2| transcription elongation factor, putative, expres... 57 9e-06
>gb|EOX92591.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508700696|gb|EOX92592.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
Length = 336
Score = 64.7 bits (156), Expect = 6e-08
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Frame = +2
Query: 41 GSYDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNP-NGLRGANRNG-ELERTDAHLRKQ 214
G +SS+ + + + N +V + S NP NG G+++N E ER + +
Sbjct: 194 GELESSALMADGDSPQRKPPQNGYHQVPDFAYSPNPHNGSSGSDKNNSEPERKPKPIPPR 253
Query: 215 G------------LKRNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQ 358
L+ +Q N +SER+AS+++RL+ENY++ ENAK+QRT+Q+++
Sbjct: 254 NEPPPKPTYSAPVLQNRQREQKESNF-DSERLASARKRLQENYKEAENAKRQRTIQVMDI 312
Query: 359 QECSKPKNTFNYSRGGG--QNRH 421
E KPKN F GG Q RH
Sbjct: 313 HELPKPKNAFFGKNKGGSSQGRH 335
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 63.5 bits (153), Expect = 1e-07
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 17/141 (12%)
Frame = +2
Query: 50 DSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNP-NGLRGANRNG-ELE-RTDAHLRKQ-- 214
D SP + N L++ + N +V + S NP NG G+++N ELE + A R++
Sbjct: 195 DGDSP--QQNHLKSTS--NVHHQVPDFAYSPNPHNGSSGSDKNNVELEPKRKAVPRRETP 250
Query: 215 -----------GLKRNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQ 361
+ N + ++ + E++AS+++RL ENYQ+ +NAKKQRT+Q+++
Sbjct: 251 NKPNQTPPIPTSVALNKQREQKDSLVDEEKLASARRRLHENYQEAQNAKKQRTIQVMDIH 310
Query: 362 ECSKPKNT-FNYSRGGGQNRH 421
+ KPKNT F +RGG Q +H
Sbjct: 311 DIPKPKNTFFAKNRGGVQAKH 331
>gb|EMJ06713.1| hypothetical protein PRUPE_ppa008362mg [Prunus persica]
Length = 335
Score = 62.8 bits (151), Expect = 2e-07
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 18/149 (12%)
Frame = +2
Query: 32 KYRGSYDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNP-NGLRGANRNG-ELERTDAHL 205
K G SSS ++ ++ + N +V + S NP NG G+++N E ER +
Sbjct: 183 KLHGELPSSSAMVDEDSPQQKIPQNGLHQVPDFAYSPNPHNGSSGSDKNNSEPERKPKAV 242
Query: 206 RKQ--------------GLKRNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTV 343
++ +N + + +++R+AS+++RL+ NY++ ENAKKQRT+
Sbjct: 243 PRREAPPKPAQSTPMSASAAQNRQREQKESNFDNDRLASARKRLQANYKEAENAKKQRTI 302
Query: 344 QLLEQQECSKPKNTF--NYSRGGGQNRHR 424
Q+++ + KPKN+F GGG H+
Sbjct: 303 QVMDIHDIPKPKNSFIAKNKGGGGSGSHQ 331
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 62.8 bits (151), Expect = 2e-07
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Frame = +2
Query: 41 GSYDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNP-NGLRGANRNG-ELERTDAHLRKQ 214
G + SS + + R N +V + S NP NG G+++N E ER + ++
Sbjct: 211 GQHASSGLMADGDSPRQKFPQNGHHQVPDFAYSPNPHNGSSGSDKNNSEPERRPKPVPRK 270
Query: 215 GLKRNLADQSMG------------------NMSESERIASSKQRLKENYQQVENAKKQRT 340
A QS+ N +S+R+AS+++RL+ NY++ ENAKKQRT
Sbjct: 271 EAPPRPAQQSVPVSASASHIVQRQREQQRENNFDSDRLASARKRLQANYKEAENAKKQRT 330
Query: 341 VQLLEQQECSKPKNT---FNYSRGGG-QNRH 421
+Q+++ E KPKN F ++GGG Q RH
Sbjct: 331 IQVMDIHELPKPKNKNTFFAKNKGGGSQGRH 361
>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
Length = 337
Score = 62.4 bits (150), Expect = 3e-07
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 ESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF--NYSRGGGQNRH 421
+SER+AS+++RL+ NY++ ENAKKQRT+Q+++ E KPKN F GG Q RH
Sbjct: 281 DSERLASARKRLQANYKEAENAKKQRTIQVMDIHELPKPKNAFFGKNKGGGSQGRH 336
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 61.6 bits (148), Expect = 5e-07
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
Frame = +2
Query: 260 ESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF----NYSRGGGQNRH 421
+S+++AS+++RL+ENY++ ENAK+QRT+Q+++ E KPKN F S GG Q RH
Sbjct: 287 DSQKLASARKRLQENYKEAENAKRQRTIQVMDIHEIPKPKNAFFSKNKGSGGGSQGRH 344
>ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 313
Score = 61.6 bits (148), Expect = 5e-07
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 20/145 (13%)
Frame = +2
Query: 47 YDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNP-NGLRGANRNGELERTDAHLRKQGLK 223
Y ++ + ++ + L N ++ + S NP NG G+++ +E A + + +
Sbjct: 172 YPGTAVMADEDSPQQRILQNGHRQIPDFAYSPNPHNGSSGSSQRNNIE---AERKPKAIP 228
Query: 224 RNLAD-----------------QSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLL 352
R A Q GN + +R AS+++RL+ENY++ NAKKQRT+Q++
Sbjct: 229 RKEAPPKPSPSVTTPASPPQNRQREGNF-DPDRFASARKRLQENYKEAANAKKQRTIQVM 287
Query: 353 EQQECSKPKNTF-NYSRGG-GQNRH 421
+ E KPKN F ++GG GQ RH
Sbjct: 288 DLHELPKPKNAFLGKNKGGTGQGRH 312
>gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus vulgaris]
Length = 353
Score = 61.2 bits (147), Expect = 6e-07
Identities = 30/59 (50%), Positives = 44/59 (74%), Gaps = 5/59 (8%)
Frame = +2
Query: 260 ESERIASSKQRLKENYQQVENAKKQRTVQLLEQQEC--SKPKNTF---NYSRGGGQNRH 421
++ER+AS+++RL+ENY++ ENAK+QRT+Q+++ E SKPKN F N GG Q RH
Sbjct: 294 DAERLASARRRLQENYKEAENAKRQRTIQVMDINELPKSKPKNAFFGKNKGGGGSQGRH 352
>ref|XP_004288319.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Fragaria vesca subsp. vesca]
Length = 344
Score = 61.2 bits (147), Expect = 6e-07
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 17/143 (11%)
Frame = +2
Query: 32 KYRGSYDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNP-NGLRGANRNG-ELERTDAHL 205
K G ++S ++ + + N +V + S NP NG G+++N E ER +
Sbjct: 192 KLHGEEPTNSVMVDGDSPQQKIHQNGHHQVPDFGYSPNPHNGSSGSDKNNSEPERKPKII 251
Query: 206 RKQGL--------------KRNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTV 343
K+ + + +Q N +++AS+++RL+ NY++ ENAK+QRT+
Sbjct: 252 PKREVPPRPTQSVSAAPPAQNRQREQRERNFDADDKLASARKRLQANYKEAENAKRQRTI 311
Query: 344 QLLEQQECSKPKNTF-NYSRGGG 409
Q+++ E KPKN+F +RGGG
Sbjct: 312 QVMDIHEIPKPKNSFIAKNRGGG 334
>gb|ESW31798.1| hypothetical protein PHAVU_002G268700g [Phaseolus vulgaris]
Length = 308
Score = 60.5 bits (145), Expect = 1e-06
Identities = 38/125 (30%), Positives = 62/125 (49%)
Frame = +2
Query: 50 DSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRKQGLKRN 229
DS + NG R N++ S N + R + A RK+ +
Sbjct: 187 DSPQEKILQNGHRQIPDFADSPNALNESFGSEHNNIEPQQR-----KPKAIPRKESPPQP 241
Query: 230 LADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSRGGG 409
A + + E +++AS+++RL ENY++V NAKKQRT+Q+++ E KPKN F GG
Sbjct: 242 SASRQRESNFELDKLASARKRLIENYKEVANAKKQRTIQVMDLHELPKPKNAFFGKNKGG 301
Query: 410 QNRHR 424
++ +
Sbjct: 302 TSQRK 306
>ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum lycopersicum]
Length = 349
Score = 60.5 bits (145), Expect = 1e-06
Identities = 28/53 (52%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = +2
Query: 266 ERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF-NYSRGGGQNRH 421
ER+ S+++RL+ENYQ+ +NAKKQRT+Q+++ E KPKN F ++GG Q+RH
Sbjct: 294 ERLNSARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNGFIAKNKGGFQSRH 346
>ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum tuberosum]
Length = 348
Score = 60.1 bits (144), Expect = 1e-06
Identities = 28/53 (52%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +2
Query: 266 ERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF-NYSRGGGQNRH 421
ER+ S+++RL+ENYQ+ +NAKKQRT+Q+++ E KPKN F ++GG Q RH
Sbjct: 294 ERLNSARRRLQENYQEAQNAKKQRTIQVMDIHEIPKPKNGFIAKNKGGFQGRH 346
>ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
distachyon]
Length = 342
Score = 60.1 bits (144), Expect = 1e-06
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Frame = +2
Query: 5 GISRQNASQKYRGSYDSSSPLLRDNGLRNGALDNSKG-KVTNQNVSSNPNGLRGANRNGE 181
G S QNA + S R NGL + N+ G + T + ++P N+ +
Sbjct: 204 GKSYQNAQVS---DFKYSPSPQRHNGLSSDRSSNNNGFETTMERHRASP--APSYNQTKQ 258
Query: 182 LERTDAHLRKQGLKRNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQ 361
+ R + +Q N+ + E++ S+++RL ENYQ+ +NAKKQRT+Q+L+
Sbjct: 259 NSSNNYSTTSSAPPRTMREQKDNNL-DLEKLDSARKRLHENYQEAQNAKKQRTMQVLDIH 317
Query: 362 ECSKPKNTFNYSRGGG----QNRHR 424
+ KPKN + R GG RHR
Sbjct: 318 DIPKPKNRNTFIRKGGGGGLPGRHR 342
>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 59.3 bits (142), Expect = 2e-06
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 ESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNT-FNYSRGGGQNRHR 424
+ ++ AS+++RL ENYQ+ +NAKKQRT+Q+++ + KPKNT F + G Q RHR
Sbjct: 276 DPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRHR 331
>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 59.3 bits (142), Expect = 2e-06
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 ESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNT-FNYSRGGGQNRHR 424
+ ++ AS+++RL ENYQ+ +NAKKQRT+Q+++ + KPKNT F + G Q RHR
Sbjct: 250 DPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRHR 305
>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 59.3 bits (142), Expect = 2e-06
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 ESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNT-FNYSRGGGQNRHR 424
+ ++ AS+++RL ENYQ+ +NAKKQRT+Q+++ + KPKNT F + G Q RHR
Sbjct: 277 DPDKFASARKRLHENYQEAQNAKKQRTIQVMDIHDIPKPKNTFFAKPKVGSQGRHR 332
>ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 314
Score = 58.9 bits (141), Expect = 3e-06
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Frame = +2
Query: 98 LDNSKGKVTNQNVSSNPN-GLRGANRNG--------ELERTDAHLRKQGLKRNLADQSMG 250
L N ++ + S NP+ G G+ RN + R +A + A +
Sbjct: 191 LQNGHRQIPDFAYSPNPHYGSFGSERNNIEAERKPKAIPRKEAPSKPSPSVTTPAPPTQN 250
Query: 251 NMSES----ERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTF-NYSRGG-GQ 412
ES +R AS+++RL+ENY+ NAKKQRT+Q+++ E KPKN F ++GG GQ
Sbjct: 251 RQRESNFDPDRFASARKRLQENYKDAANAKKQRTIQVMDLHELPKPKNAFLGKNKGGTGQ 310
Query: 413 NRH 421
RH
Sbjct: 311 GRH 313
>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|568820070|ref|XP_006464554.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
hypothetical protein CICLE_v10025964mg [Citrus
clementina]
Length = 353
Score = 58.2 bits (139), Expect = 5e-06
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 25/148 (16%)
Frame = +2
Query: 53 SSSPLLRDNGLRNGALDNSKGKVTNQNVSSNP-NGLRGANRNG-ELERTDAHL---RKQG 217
+SS ++ + + N +V + S NP NG G+++N E ER RK+
Sbjct: 205 ASSAMMDGDSPQQKIPQNGNHQVPDFAYSPNPHNGSSGSDKNNSEPERKSKQAPLPRKEA 264
Query: 218 LK------------------RNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTV 343
L R + R+AS+++RL+ENY++ ENAK+QRT+
Sbjct: 265 LSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENAKRQRTI 324
Query: 344 QLLEQQECSKPKNTFNYSRGGG--QNRH 421
Q+++ E KPKN F GG Q RH
Sbjct: 325 QVMDIHEIPKPKNAFFGKNKGGSSQGRH 352
>ref|XP_002442867.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
gi|241943560|gb|EES16705.1| hypothetical protein
SORBIDRAFT_08g004100 [Sorghum bicolor]
Length = 348
Score = 58.2 bits (139), Expect = 5e-06
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +2
Query: 32 KYRGSYDSSSPLLRDNGLRNGALDNSKGKVTNQNVSSNPNGLRGANRNGELERTDAHLRK 211
KY S S + L + + ++++ K + N + + N + A R
Sbjct: 221 KYSSSPQSHNVLSSERSSNHNLVESAVEKRRTSPAPAYHNTKQNNSNNYPAVSSSAPARA 280
Query: 212 QGLKRNLADQSMGNMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPK--NT 385
++N + +SE++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPK NT
Sbjct: 281 MREQKN-------TLLDSEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNT 333
Query: 386 FNYSRGGG 409
F GGG
Sbjct: 334 FIRKSGGG 341
>gb|ABA95891.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 229
Score = 57.4 bits (137), Expect = 9e-06
Identities = 24/53 (45%), Positives = 40/53 (75%)
Frame = +2
Query: 251 NMSESERIASSKQRLKENYQQVENAKKQRTVQLLEQQECSKPKNTFNYSRGGG 409
N+ + E++ S+++RL+ENYQ+ +NAKKQRT+Q+++ + KPKN + R GG
Sbjct: 169 NLMDLEKLDSARKRLQENYQEAQNAKKQRTIQVMDIHDIPKPKNRNAFIRKGG 221