BLASTX nr result

ID: Ephedra25_contig00007042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00007042
         (592 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY07522.1| Ubiquitin ligase E3 alpha, putative isoform 1 [Th...    59   7e-07

>gb|EOY07522.1| Ubiquitin ligase E3 alpha, putative isoform 1 [Theobroma cacao]
            gi|508715626|gb|EOY07523.1| Ubiquitin ligase E3 alpha,
            putative isoform 1 [Theobroma cacao]
          Length = 2054

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 31/102 (30%), Positives = 53/102 (51%)
 Frame = +2

Query: 71   TTTAAEKALEKSKVPMSVEAEESPEGMISTVCSLCHELESNSSIAYLSFVQRSRILSISE 250
            T+TA +    +S++  S +AE   EG +   CSLCH+  S + +++L  +Q+SR+LS  +
Sbjct: 1177 TSTADDDPKSESEMSNS-DAEHETEGAVQESCSLCHDPTSKNPVSFLILLQKSRLLSFVD 1235

Query: 251  SGTPSWDTSNDRDSRNGYYERKGLKNINLSEPNEMLREKEAE 376
             G PSWD  +D++       R      N S  +  L  +  +
Sbjct: 1236 RGPPSWDRWSDKEQGYSLTNRSDQPRSNASSSSSGLASQSVQ 1277


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