BLASTX nr result
ID: Ephedra25_contig00007009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00007009
(1837 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006828470.1| hypothetical protein AMTR_s00060p00141700 [A... 486 e-134
gb|EOY01103.1| Cleavage and polyadenylation specificity factor 7... 485 e-134
ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Popu... 478 e-132
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul... 478 e-132
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 474 e-131
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 470 e-129
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 469 e-129
ref|XP_001769615.1| predicted protein [Physcomitrella patens] gi... 468 e-129
ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 463 e-127
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec... 463 e-127
ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 459 e-126
gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus pe... 456 e-125
ref|XP_004956755.1| PREDICTED: cleavage and polyadenylation spec... 455 e-125
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 452 e-124
gb|ESW25230.1| hypothetical protein PHAVU_003G018200g [Phaseolus... 451 e-124
ref|XP_006574816.1| PREDICTED: cleavage and polyadenylation spec... 449 e-123
ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group] g... 448 e-123
gb|AAS80153.1| ACT11D09.9 [Cucumis melo] 448 e-123
ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation spec... 447 e-123
ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec... 446 e-122
>ref|XP_006828470.1| hypothetical protein AMTR_s00060p00141700 [Amborella trichopoda]
gi|548833218|gb|ERM95886.1| hypothetical protein
AMTR_s00060p00141700 [Amborella trichopoda]
Length = 716
Score = 486 bits (1250), Expect = e-134
Identities = 267/558 (47%), Positives = 369/558 (66%), Gaps = 14/558 (2%)
Frame = +1
Query: 4 SVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVAA 183
+VVYTGDYNMTPDRHLG+AQIDRL+ DLLITESTYA ++R+SK ARER+FL AVH CVA
Sbjct: 171 TVVYTGDYNMTPDRHLGAAQIDRLYVDLLITESTYANSVRESKLARERDFLTAVHKCVAG 230
Query: 184 GGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNVK 363
GGKVLIP+FALGRAQELC+LLDD+WERM++K+PIYFSAGLTIQ+N+YY++LI WT+Q VK
Sbjct: 231 GGKVLIPIFALGRAQELCMLLDDFWERMNLKIPIYFSAGLTIQANMYYKILIGWTSQKVK 290
Query: 364 DTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVALP 543
D Y +RN FDFK+V +FDRS + A GPCVLFATPGM+SGG SL+VFK+WAPSE NL+ LP
Sbjct: 291 DAYVTRNAFDFKNVCDFDRSQMTAPGPCVLFATPGMLSGGFSLEVFKQWAPSEMNLICLP 350
Query: 544 GYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKHT 723
GYCV GTVG+KLMS K K+I LD +T IDVRCQIH L+F+AHTD+KGIMDL+K VSP+
Sbjct: 351 GYCVYGTVGNKLMS-KPKQIILDDKTHIDVRCQIHQLAFTAHTDSKGIMDLIKHVSPRQV 409
Query: 724 VLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVELVEQ 903
VLVHGE+P M +L+ RI +EL I + PAN+ET+ VPS +KV++TK F+K N ++
Sbjct: 410 VLVHGERPNMEILRERIKSELTIECHIPANHETVSVPSTQIVKVDMTKAFIKHNTSMM-- 467
Query: 904 CNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIKI-HFSDSSENVNASPND 1080
+ VL ++ L L + EG ++E G++ KI H + +N ++
Sbjct: 468 -RRRVLDDIIEGNKTLTGLPSKV------AEGIIVMEKGKRAKIVHQEELLPFLNTKEHE 520
Query: 1081 IQYVCCYPIY--MKSGR---NRKSVCNSEDRQETISGPD------STNKRIRTAMGQGDE 1227
+ C+P+Y ++SG +KS S +R S S + ++ M + D
Sbjct: 521 VHCSYCFPVYVGIQSGEVSMAKKSEGLSIERDSKGSSMQKDLDALSAERNLKAFMVEKDS 580
Query: 1228 IN-IEKDVVETSTEKSLMTTVMKDASSPDVCMLTDFSHDSNYATSRHTMHNNSPLSKSDI 1404
+ +E+D+ E++L ASS + + S + + + L + +
Sbjct: 581 RSLLERDLEALPAERNL-------ASSSGTEVAIEIDQMSEKSEALFAERCLASLDRHPL 633
Query: 1405 DFLHMIYIKLVQHLGAL-NFEEHQGCIKGMSVCIRICPEENCFYRSVDFPDRCKLAYILH 1581
LH++++KL + +G + N +E GCI+ S+CI +C E+C YR+ + + A
Sbjct: 634 --LHLLFLKLKEWIGEVENIQELYGCIQLNSMCIHVCGNEDCPYRTEPAKEYDR-ALFFC 690
Query: 1582 CSWSRKDYSFAEKIISVL 1635
CSWS D A +++S +
Sbjct: 691 CSWSWVDEKLARRVVSFM 708
>gb|EOY01103.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 485 bits (1248), Expect = e-134
Identities = 241/387 (62%), Positives = 302/387 (78%), Gaps = 2/387 (0%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDS+Y REREFLKAVH CVA
Sbjct: 169 AAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSRYGREREFLKAVHNCVA 228
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
AGGKVLIP FALGRAQELCILL+DYWERM++KVPIYFS+GLTIQ+N+YY++LI+WT+Q +
Sbjct: 229 AGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSSGLTIQANMYYKMLINWTSQKI 288
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TYA+ N FDFK+V NFDRSLI A GPCVLFATPGMISGG SL+VF +WAPSE NL+ L
Sbjct: 289 KETYATHNAFDFKNVQNFDRSLINAPGPCVLFATPGMISGGFSLEVFMQWAPSEINLITL 348
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMSGK KI LDK T++DVRCQIH LSFS HTDAKGIMDLVK +SPKH
Sbjct: 349 PGYCVAGTIGHKLMSGKPTKIDLDKDTQVDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKH 408
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVELVE 900
+LVHGEKPKM LK RI +ELGI Y PANN+T+ +P+ H +K + + F+K +
Sbjct: 409 AILVHGEKPKMATLKERIQSELGIQCYCPANNDTVTIPTTHYVKADASDAFIKSCLNPNF 468
Query: 901 QCNQNVLSNLDYN-IHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSENVNASP 1074
+ +++ + Y+ +D +++ + V D EG +VE G+K K IH + + +
Sbjct: 469 KFSKSSSVDKSYSGSNDSKAIPGLQVSDERVAEGILVVEKGKKAKVIHQDELLHMLGENK 528
Query: 1075 NDIQYVCCYPIYMKSGRNRKSVCNSED 1155
+++Q+ C+P M++ R K+ SED
Sbjct: 529 HEVQFAYCFP--MRTERLEKT--RSED 551
>ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329587|gb|ERP56231.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 464
Score = 478 bits (1230), Expect = e-132
Identities = 243/394 (61%), Positives = 291/394 (73%), Gaps = 8/394 (2%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
S++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDSKYAREREFLKAVH CVA
Sbjct: 9 SAMVYTGDYNMTPDRHLGAAQIDRLELDLLITESTYATTIRDSKYAREREFLKAVHECVA 68
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLDDYWERM++KVPIYFSAGLTIQ+N+YY++LISWT+Q V
Sbjct: 69 GGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQKV 128
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TYA+RN FDFKHV NFDRSLI A GPCVLFATPGMISGG SL+VFK+WAP E NL+ L
Sbjct: 129 KETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITL 188
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGTVGHKLMSGK KI LDK T+IDVRCQIH LSFS HTD+KGIMDL K +SP++
Sbjct: 189 PGYCVAGTVGHKLMSGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRN 248
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKR----NV 888
+LVHGEKPKM LK RI TEL IP Y PAN + + +PS +K + + F++ N
Sbjct: 249 VILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNF 308
Query: 889 ELVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSENVN 1065
+++ ++ N D + + + V D EG I+E G+K + +H D +
Sbjct: 309 RFLKRSKED---NSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLR 365
Query: 1066 ASPNDIQYVCCYPIY---MKSGRNRKSVCNSEDR 1158
+D+Q+ C ++ RNR D+
Sbjct: 366 QKKHDVQFAYCCAAQLDNLEETRNRDDALGLSDK 399
>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
gi|550329586|gb|EEF00952.2| metallo-beta-lactamase family
protein [Populus trichocarpa]
Length = 625
Score = 478 bits (1230), Expect = e-132
Identities = 243/394 (61%), Positives = 291/394 (73%), Gaps = 8/394 (2%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
S++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDSKYAREREFLKAVH CVA
Sbjct: 170 SAMVYTGDYNMTPDRHLGAAQIDRLELDLLITESTYATTIRDSKYAREREFLKAVHECVA 229
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLDDYWERM++KVPIYFSAGLTIQ+N+YY++LISWT+Q V
Sbjct: 230 GGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANLYYKILISWTSQKV 289
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TYA+RN FDFKHV NFDRSLI A GPCVLFATPGMISGG SL+VFK+WAP E NL+ L
Sbjct: 290 KETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLEVFKQWAPCEMNLITL 349
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGTVGHKLMSGK KI LDK T+IDVRCQIH LSFS HTD+KGIMDL K +SP++
Sbjct: 350 PGYCVAGTVGHKLMSGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSKGIMDLTKFLSPRN 409
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKR----NV 888
+LVHGEKPKM LK RI TEL IP Y PAN + + +PS +K + + F++ N
Sbjct: 410 VILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHASNTFIRSCLNPNF 469
Query: 889 ELVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSENVN 1065
+++ ++ N D + + + V D EG I+E G+K + +H D +
Sbjct: 470 RFLKRSKED---NSDQVLRNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLR 526
Query: 1066 ASPNDIQYVCCYPIY---MKSGRNRKSVCNSEDR 1158
+D+Q+ C ++ RNR D+
Sbjct: 527 QKKHDVQFAYCCAAQLDNLEETRNRDDALGLSDK 560
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 474 bits (1219), Expect = e-131
Identities = 238/393 (60%), Positives = 292/393 (74%), Gaps = 3/393 (0%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
S++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDSKYAREREFLK VH CVA
Sbjct: 170 SAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSKYAREREFLKVVHKCVA 229
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELC+LLDDYWERM++KVPIYFSAGLTIQ+N+YY++LI WT+Q +
Sbjct: 230 GGGKVLIPTFALGRAQELCLLLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKI 289
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TY SRN FDFK+V FDRSL+ A GPCVLFATPGMISGG SL+VFK WAP E NLV L
Sbjct: 290 KETYTSRNAFDFKNVYTFDRSLLDAPGPCVLFATPGMISGGFSLEVFKRWAPCEMNLVTL 349
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMSGK KI LDK T+IDVRCQIH LSFS HTDAKGIMDLVK +SPKH
Sbjct: 350 PGYCVAGTIGHKLMSGKPSKINLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKH 409
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVE-LV 897
+LVHGEKPKM LK RI +EL I Y PAN ET+ +PS +K + ++ F++ +
Sbjct: 410 VILVHGEKPKMASLKERIQSELEIQCYVPANCETLCIPSTLFVKADASEAFIRSCLSPNF 469
Query: 898 EQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSENVNASP 1074
N+++ D +H + + V D EG +VE +K + +H + + A
Sbjct: 470 RFLNKSLKDTSDLVLHSTNATSRLEVSDERVAEGILVVEKNKKARVVHQDELLLMLGAKQ 529
Query: 1075 NDIQYVCCYPIYMKS-GRNRKSVCNSEDRQETI 1170
+++Q+ C P+ + + + R+ ++ D T+
Sbjct: 530 HEVQFAYCCPVQVDNMDQTRRDPSSTHDELLTL 562
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 470 bits (1209), Expect = e-129
Identities = 236/377 (62%), Positives = 288/377 (76%), Gaps = 8/377 (2%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA T+RDSKYAREREFLKAVH CVA
Sbjct: 1419 AAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTVRDSKYAREREFLKAVHKCVA 1478
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLD+YWERM++KVPIYFSAGLTIQ+N+YY++LISWTNQ V
Sbjct: 1479 DGGKVLIPTFALGRAQELCILLDNYWERMNLKVPIYFSAGLTIQANMYYKMLISWTNQRV 1538
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TYA+ N FDFK+V +FDRSLI A GPCVLFATPGMISGG SL+VFK WAPSE NLV L
Sbjct: 1539 KETYATHNAFDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTL 1598
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYC+AGT+GHKL +GK KI LDK +I VRCQIH LSFS HTDAKGIMDLVK +SPKH
Sbjct: 1599 PGYCLAGTIGHKLTTGKPTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKH 1658
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRN----- 885
+LVHGEKPKM LK +I ++LGI Y PANN+T+ +PS +K + +K F++ +
Sbjct: 1659 VILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNF 1718
Query: 886 --VELVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSE 1056
V+ + + N++S + E+ + V D EG IVE +K K +H ++
Sbjct: 1719 KFVKTISEDKSNLVSK------ETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLL 1772
Query: 1057 NVNASPNDIQYVCCYPI 1107
+ +D+Q+ C P+
Sbjct: 1773 MIGKDKHDVQFAYCCPV 1789
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 469 bits (1206), Expect = e-129
Identities = 236/376 (62%), Positives = 287/376 (76%), Gaps = 8/376 (2%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA T+RDSKYAREREFLKAVH CVA
Sbjct: 225 AAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTVRDSKYAREREFLKAVHKCVA 284
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLD+YWERM++KVPIYFSAGLTIQ+N+YY++LISWTNQ V
Sbjct: 285 DGGKVLIPTFALGRAQELCILLDNYWERMNLKVPIYFSAGLTIQANMYYKMLISWTNQRV 344
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TYA+ N FDFK+V +FDRSLI A GPCVLFATPGMISGG SL+VFK WAPSE NLV L
Sbjct: 345 KETYATHNAFDFKNVRSFDRSLINAPGPCVLFATPGMISGGFSLEVFKLWAPSEMNLVTL 404
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYC+AGT+GHKL +GK KI LDK +I VRCQIH LSFS HTDAKGIMDLVK +SPKH
Sbjct: 405 PGYCLAGTIGHKLTTGKPTKIDLDKDIQISVRCQIHQLSFSPHTDAKGIMDLVKFLSPKH 464
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRN----- 885
+LVHGEKPKM LK +I ++LGI Y PANN+T+ +PS +K + +K F++ +
Sbjct: 465 VILVHGEKPKMASLKGKIESDLGIQCYYPANNDTVCIPSTCWLKADTSKTFIRSSLNPNF 524
Query: 886 --VELVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSE 1056
V+ + + N++S + E+ + V D EG IVE +K K +H ++
Sbjct: 525 KFVKTISEDKSNLVSK------ETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLL 578
Query: 1057 NVNASPNDIQYVCCYP 1104
+ +D+Q+ C P
Sbjct: 579 MIGKDKHDVQFAYCCP 594
>ref|XP_001769615.1| predicted protein [Physcomitrella patens] gi|162679157|gb|EDQ65608.1|
predicted protein [Physcomitrella patens]
Length = 563
Score = 468 bits (1203), Expect = e-129
Identities = 247/408 (60%), Positives = 298/408 (73%), Gaps = 12/408 (2%)
Frame = +1
Query: 4 SVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVAA 183
+VVYTGDYNMTPDRHLG+AQIDRL PDLLITESTYA T+RDSK AREREFLKAVH CVAA
Sbjct: 165 TVVYTGDYNMTPDRHLGAAQIDRLEPDLLITESTYATTVRDSKRAREREFLKAVHKCVAA 224
Query: 184 GGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNVK 363
GGKVLIPVFALGRAQELCILLD+YWER ++ +PIY SAGLT+Q+NVYY+LLISWTNQ VK
Sbjct: 225 GGKVLIPVFALGRAQELCILLDEYWERTNLDMPIYISAGLTMQANVYYKLLISWTNQKVK 284
Query: 364 DTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVALP 543
DTY +RN FDFKHV+ F+RS I A GPCVLFATPGM+SGGLSL+VFK WAPSE N++ LP
Sbjct: 285 DTYVTRNTFDFKHVIPFERSKIDAPGPCVLFATPGMLSGGLSLEVFKHWAPSESNMIILP 344
Query: 544 GYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKHT 723
G+CVAGTVG KLM GK KI LDKRT +DVRCQI LSFSAHTDAKGI+DLV+ V+P++
Sbjct: 345 GFCVAGTVGSKLMPGKPAKIDLDKRTTLDVRCQIQHLSFSAHTDAKGILDLVRHVAPRNV 404
Query: 724 VLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVELVEQ 903
VLVHGEKPKM +LK +I ++L IP Y PAN ET+E+ IKV V+K+FL+ N++ ++
Sbjct: 405 VLVHGEKPKMAILKKKISSDLCIPCYDPANLETVEITPRCPIKVGVSKQFLESNLKKKDR 464
Query: 904 CNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSENVNASPND 1080
Q ++ I V G I+E +IK IH ++S + + +
Sbjct: 465 -----------------QFQLPRAREDILVNGFVIMEDSLRIKVIHPDEASSVLGLTRHH 507
Query: 1081 IQYVCCYPIY--MKSGRNRKSV-CNS--------EDRQETISGPDSTN 1191
+ + C PIY G+N V C S + RQET+ G TN
Sbjct: 508 MSFSCLCPIYPAHNDGKNDLPVRCPSPVDLNAAEDGRQETLVGIKVTN 555
>ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like, partial [Cucumis
sativus]
Length = 472
Score = 463 bits (1192), Expect = e-127
Identities = 232/374 (62%), Positives = 287/374 (76%), Gaps = 1/374 (0%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDR+ DLLITESTYA TIRDSKYAREREFLKAVH C+A
Sbjct: 14 AAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLA 73
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
+GGKVLIP FALGRAQELC+LLDDYWERM++K PIY SAGLT+Q+N+YY++LISWT+Q V
Sbjct: 74 SGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKV 133
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TY +RN FDFK+V FDRS+I A GPCVLFATPGMIS G SL+VFK WAPS+ NL+ L
Sbjct: 134 KETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITL 193
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGTVGHKLMSGK KI LDK T+IDV+CQ+H L+FS HTD+KGIMDLVK +SPKH
Sbjct: 194 PGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKH 253
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVELVE 900
+LVHGEKPKM VLK RI++ELGIP + PANNET+ + S +K + F ++
Sbjct: 254 VILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMF-------IQ 306
Query: 901 QCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSENVNASPN 1077
C S ++N+ +LQ V D EG ++E+G+K K +H + + +
Sbjct: 307 SC-----STPNFNLSCGPALQ---VSDDRVNEGILVMENGKKXKALHQDELLLLLGQQEH 358
Query: 1078 DIQYVCCYPIYMKS 1119
++++ C PIY S
Sbjct: 359 EVRFAHCRPIYFGS 372
>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Cucumis sativus]
Length = 649
Score = 463 bits (1192), Expect = e-127
Identities = 236/386 (61%), Positives = 291/386 (75%), Gaps = 13/386 (3%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDR+ DLLITESTYA TIRDSKYAREREFLKAVH C+A
Sbjct: 170 AAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLA 229
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
+GGKVLIP FALGRAQELC+LLDDYWERM++K PIY SAGLT+Q+N+YY++LISWT+Q V
Sbjct: 230 SGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKV 289
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TY +RN FDFK+V FDRS+I A GPCVLFATPGMIS G SL+VFK WAPS+ NL+ L
Sbjct: 290 KETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITL 349
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGTVGHKLMSGK KI LDK T+IDV+CQ+H L+FS HTD+KGIMDLVK +SPKH
Sbjct: 350 PGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKH 409
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTK----------- 867
+LVHGEKPKM VLK RI++ELGIP + PANNET+ + S +K +
Sbjct: 410 VILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNF 469
Query: 868 EFLKRNVELVEQCNQNVLSNLDYNIHDLES-LQEVMVQDRIPVEGNAIVESGQKIK-IHF 1041
+FLKRN L++ L +L Y + L + V D EG ++E+G+K K +H
Sbjct: 470 KFLKRN--LIDP----DLKDLSYKAERTSNMLIPLQVSDDRVNEGILVMENGKKTKALHQ 523
Query: 1042 SDSSENVNASPNDIQYVCCYPIYMKS 1119
+ + +++++ C PIY S
Sbjct: 524 DELLLLLGQQEHEVRFAHCRPIYFGS 549
>ref|XP_004498247.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Cicer arietinum]
Length = 532
Score = 459 bits (1181), Expect = e-126
Identities = 227/348 (65%), Positives = 271/348 (77%), Gaps = 3/348 (0%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+ +VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDSKYAREREFLKAVH CV+
Sbjct: 170 AEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVS 229
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLDDYWERM++KVPIYFSAGLTIQ+N+YY++LI WT+Q +
Sbjct: 230 GGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKI 289
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
KDTY++ N FDFK+V F+RS+I A+GPCVLFATPGMISGG SL+VFK WAPSE NLV L
Sbjct: 290 KDTYSTHNAFDFKNVHKFERSMIDATGPCVLFATPGMISGGFSLEVFKHWAPSENNLVTL 349
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGTVGHKL SGK KI D T+IDVRCQIH L+FS HTD+KGIMDLVK +SPKH
Sbjct: 350 PGYCVAGTVGHKLTSGKPTKINTDPDTQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKH 409
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVE--- 891
+LVHGEKPKM LK RI++ELGI Y PANNET+ +PS + + F++ +
Sbjct: 410 VILVHGEKPKMASLKERIHSELGIQCYNPANNETVCIPSTQYVNAEASGTFIRNCLNPNF 469
Query: 892 LVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIKI 1035
++C+ SN + D ++ V+D +G ++E +K KI
Sbjct: 470 QFQKCSSEDTSN--STMIDKNLTPKLQVEDERVADGVLVMEKSKKAKI 515
>gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 456 bits (1174), Expect = e-125
Identities = 232/396 (58%), Positives = 287/396 (72%), Gaps = 12/396 (3%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQI+RL DLLI+ESTY TIRDSKYAREREFL+AVH CVA
Sbjct: 173 AAMVYTGDYNMTPDRHLGAAQIERLNLDLLISESTYGTTIRDSKYAREREFLRAVHKCVA 232
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILL+DYWERM++KVPIYFSAGLT+Q+N+YY++LISWT+Q V
Sbjct: 233 GGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTLQANMYYKMLISWTSQKV 292
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+TY++RN FDFK+ FDRS+I A GPCVLFATPGMISGG SL+VFK WAPSE NLV L
Sbjct: 293 KETYSTRNAFDFKNAHKFDRSMINAPGPCVLFATPGMISGGFSLEVFKHWAPSEMNLVTL 352
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMSGK KI LDK T+IDVRCQIH LSFS HTDAKGIMDL+K +SPK+
Sbjct: 353 PGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVRCQIHHLSFSPHTDAKGIMDLIKFLSPKN 412
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKR----NV 888
+LVHGEKPKM LK +I +ELGI + PANNET+ + S H +K + F++ N
Sbjct: 413 VILVHGEKPKMATLKGKIQSELGIQCHDPANNETVSISSTHYVKALASDAFIRSCSNPNF 472
Query: 889 ELVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSENVN 1065
+ + ++ + N + + V D EG ++E +K K +H + +
Sbjct: 473 KFSKSSQEDEHGS---NSRNNNFTPRLRVSDERVAEGVLVMERNKKAKVVHQDELLLMLG 529
Query: 1066 ASPNDIQYVCCYPIYM-------KSGRNRKSVCNSE 1152
+ +Q+ C P + S N +C SE
Sbjct: 530 EKKHQVQFAYCCPADIGHLGETKSSTTNDGQLCKSE 565
>ref|XP_004956755.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Setaria italica]
Length = 561
Score = 455 bits (1170), Expect = e-125
Identities = 224/349 (64%), Positives = 271/349 (77%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDSK+AREREFLKAVH CV+
Sbjct: 173 AAMVYTGDYNMTPDRHLGAAQIDRLKLDLLITESTYAKTIRDSKHAREREFLKAVHKCVS 232
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELC+LLDDYWERM++K+PIYFSAGLTIQ+N+YY++LI WT+Q +
Sbjct: 233 GGGKVLIPTFALGRAQELCMLLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKI 292
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
KD++A N FDFKHV +F+RS I GPCVLFATPGMISGG SL+ FK+WAPSEKNL+ L
Sbjct: 293 KDSHAVHNSFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEAFKKWAPSEKNLITL 352
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGTVGHKLMSGK KI LDK T IDVRCQIH L+FS HTD+KGIMDL + +SPKH
Sbjct: 353 PGYCVAGTVGHKLMSGKTTKIVLDKDTHIDVRCQIHQLAFSPHTDSKGIMDLTEFLSPKH 412
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVELVE 900
+LVHGEKP+M LK RI +ELG+P + PANNE++ +P+ H +K++ T+ F+ E
Sbjct: 413 VILVHGEKPQMAFLKERIESELGMPCFYPANNESVSIPTTHTLKMSTTERFITSCA--AE 470
Query: 901 QCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIKIHFSD 1047
Q Q++ N+ EV D EG ++E + KI D
Sbjct: 471 QGKQSLRKR---NLIHGTGASEVNGSDEAAAEGVLVMEKHKAPKILCED 516
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 452 bits (1164), Expect = e-124
Identities = 230/387 (59%), Positives = 282/387 (72%), Gaps = 7/387 (1%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDRL DL+ITESTYA TIRDSKY REREFLKAVHTCVA
Sbjct: 165 AAMVYTGDYNMTPDRHLGAAQIDRLSLDLVITESTYATTIRDSKYPREREFLKAVHTCVA 224
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILL+DYWERM++KVPIYFS LT Q+N+YY +LISWT+Q +
Sbjct: 225 GGGKVLIPSFALGRAQELCILLEDYWERMNLKVPIYFSTALTRQANMYYMMLISWTSQKI 284
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K+T+++ N FDFK+V F+RS+I A GPCVLFA PGMISGG SL+VFK WAPSEKNLV +
Sbjct: 285 KETHSTHNAFDFKNVHKFERSMIDAPGPCVLFAGPGMISGGFSLEVFKHWAPSEKNLVIM 344
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMSGK KI LDK T IDVRCQIH L+FS HTDAKGIMDLVK +SPKH
Sbjct: 345 PGYCVAGTIGHKLMSGKPTKIDLDKDTRIDVRCQIHQLAFSPHTDAKGIMDLVKFLSPKH 404
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVELVE 900
+LVHGEKPKM LK RI TELGI Y PA NET+ +PS H + F V+
Sbjct: 405 VILVHGEKPKMATLKGRIETELGIQCYYPAINETVSIPSTHYATAVTSDAF-------VQ 457
Query: 901 QCNQ-NVLSNLDYNIH-----DLESLQEVMVQDRIPVEGNAIVESGQKIK-IHFSDSSEN 1059
C+ N + + H + +S+ + V D EG ++E +K K +H +
Sbjct: 458 SCSSPNFKFSTSSSEHSQGSSNSKSIPRLRVSDDRVAEGILVMEKNKKAKVVHQDELPLM 517
Query: 1060 VNASPNDIQYVCCYPIYMKSGRNRKSV 1140
+ + +++ C P ++ + + S+
Sbjct: 518 LGEKKHQVKFAYCCPAHIGNSQENTSL 544
>gb|ESW25230.1| hypothetical protein PHAVU_003G018200g [Phaseolus vulgaris]
Length = 537
Score = 451 bits (1159), Expect = e-124
Identities = 223/352 (63%), Positives = 267/352 (75%), Gaps = 3/352 (0%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+ +VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDS+YAREREFLKAVH CV+
Sbjct: 170 AEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKCVS 229
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILL+DYWERM++KVPIYFSAGLTIQ+N YY++LISWT+Q +
Sbjct: 230 CGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLISWTSQKI 289
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
KDTY+ N FDFK+V F++S+I A GPCVLFATPGMISGG SL+VFK WA SE NLV L
Sbjct: 290 KDTYSKHNAFDFKNVQKFEKSMIDAPGPCVLFATPGMISGGFSLEVFKHWAVSENNLVTL 349
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMS K K+ LD T IDVRCQ+H L+FS HTD+KGIMDLV ++PKH
Sbjct: 350 PGYCVAGTIGHKLMSDKRGKVDLDANTRIDVRCQVHQLAFSPHTDSKGIMDLVNFLAPKH 409
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVE--- 891
+LVHGEK KM LK +I++E GI Y PANNETI +PS H + + F++ +
Sbjct: 410 VILVHGEKHKMASLKEKIHSEFGIQCYDPANNETICIPSTHYVNAEASDTFIRSCLSPNF 469
Query: 892 LVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIKIHFSD 1047
++CN + N D + + V+D EG +VE G+K KI D
Sbjct: 470 TFQKCNSADIYN--STTPDKNLMPMLQVEDERVSEGVLVVEKGKKAKIVHQD 519
>ref|XP_006574816.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like isoform X1 [Glycine max]
Length = 532
Score = 449 bits (1154), Expect = e-123
Identities = 221/358 (61%), Positives = 267/358 (74%), Gaps = 9/358 (2%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+ +VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA TIRDS+YAREREFLKAVH CV+
Sbjct: 170 AEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKCVS 229
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILL+DYWERM++KVPIYFSAGLTIQ+N YY++LI WT Q +
Sbjct: 230 CGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLIRWTRQKI 289
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
KDTY+ N FDFK+V F+RS+I A GPCVLFATPGM+SGG S++VFK WA SE NLV+L
Sbjct: 290 KDTYSKHNAFDFKNVQKFERSMIDAPGPCVLFATPGMLSGGFSVEVFKHWAVSENNLVSL 349
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCV GT+GHKLMS K K+ LD T+IDVRCQIH L+FS HTD+KGIMDLV +SPKH
Sbjct: 350 PGYCVPGTIGHKLMSDKHDKVDLDPNTKIDVRCQIHQLAFSPHTDSKGIMDLVNFLSPKH 409
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLK------- 879
+LVHGEK KM LK +I++ELGI Y PANNET+ +PS + + + F++
Sbjct: 410 VILVHGEKHKMASLKEKIHSELGIQCYDPANNETVTIPSANYVYAETSDTFIRSCLSPNF 469
Query: 880 --RNVELVEQCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIKIHFSD 1047
+ V+ CN + D + E+ V+D EG ++E G+K KI D
Sbjct: 470 TFQKCSSVDLCNSTTV--------DRNLMPELQVEDERVAEGVLVLEKGKKAKIVHQD 519
>ref|NP_001063107.1| Os09g0397900 [Oryza sativa Japonica Group]
gi|50252615|dbj|BAD28786.1| putative FEG protein [Oryza
sativa Japonica Group] gi|113631340|dbj|BAF25021.1|
Os09g0397900 [Oryza sativa Japonica Group]
gi|218202115|gb|EEC84542.1| hypothetical protein
OsI_31281 [Oryza sativa Indica Group]
gi|222641522|gb|EEE69654.1| hypothetical protein
OsJ_29268 [Oryza sativa Japonica Group]
Length = 559
Score = 448 bits (1153), Expect = e-123
Identities = 209/292 (71%), Positives = 249/292 (85%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDRL DLLITESTYA T+RDSK+AREREFLKAVH CV+
Sbjct: 173 AAIVYTGDYNMTPDRHLGAAQIDRLKLDLLITESTYAKTVRDSKHAREREFLKAVHKCVS 232
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLDDYWERM++K+PIYFSAGLTIQ+N+YY++LI WT+Q +
Sbjct: 233 GGGKVLIPAFALGRAQELCILLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKI 292
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K++Y N FDFKHV +F+RS I GPCVLFATPGMISGG SL+VFK+WAPSEKNLV L
Sbjct: 293 KNSYTVHNPFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEVFKKWAPSEKNLVTL 352
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMSGK +I +DK T IDVRCQIH LSFS HTD+KGIMDL + +SP H
Sbjct: 353 PGYCVAGTIGHKLMSGKPTRIDIDKDTHIDVRCQIHQLSFSPHTDSKGIMDLTEFLSPSH 412
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFL 876
+LVHGEKP+M LK RI +ELG+ PANNET+ +P+ +K+N T++F+
Sbjct: 413 VILVHGEKPQMAFLKERIESELGMQCCYPANNETVSIPTSQNLKINATEKFI 464
>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
Length = 708
Score = 448 bits (1152), Expect = e-123
Identities = 236/411 (57%), Positives = 291/411 (70%), Gaps = 38/411 (9%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQIDR+ DLLITESTYA TIRDSKYAREREFLKAVH C+A
Sbjct: 202 AAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLA 261
Query: 181 AGGKVLIPVFALGRAQ-ELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQN 357
+GGKVLIP FALGRAQ ELC+LLDDYWERM++K PIY SAGLT+Q+N+YY++LISWT+Q
Sbjct: 262 SGGKVLIPTFALGRAQQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQK 321
Query: 358 VKDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVA 537
VK+TY +RN FDFK+V FDRS+I A GPCVLFATPGMIS G SL+VFK WAPS+ NL+
Sbjct: 322 VKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLIT 381
Query: 538 LPGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPK 717
LPGYCVAGTVGHKLMSGK KI LDK T+IDV H L+FS HTD+KGIMDLVK +SPK
Sbjct: 382 LPGYCVAGTVGHKLMSGKPTKIDLDKDTQIDV----HQLAFSPHTDSKGIMDLVKFLSPK 437
Query: 718 HTVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTK---------- 867
H +LVHGEKPKM VLK RI++ELGIP + PANNET+ + S IK +
Sbjct: 438 HVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSIKAEASSMFIQSCSTPN 497
Query: 868 -EFLKRNV--------------------ELVEQCNQNVLSNLDYNI-----HDLESLQEV 969
+FLKRN+ L+ +C+ +L+ N+ L E+
Sbjct: 498 FKFLKRNLIDKIDPDLKDLSYKAVRTSNMLIRECSNPHFKHLNRNLDAKFDSSLSGGPEL 557
Query: 970 MVQDRIPVEGNAIVESGQKIK-IHFSDSSENVNASPNDIQYVCCYPIYMKS 1119
V D EG ++E+G+K K +H + + +++++ C PIY S
Sbjct: 558 QVSDDRVNEGILVMENGKKTKALHQDELLLLLGEQEHEVRFAHCRPIYFGS 608
>ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Oryza brachyantha]
Length = 545
Score = 447 bits (1151), Expect = e-123
Identities = 209/292 (71%), Positives = 249/292 (85%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
++VVYTGDYNMTPDRHLG+AQIDRL DLLITESTYA T+RDSK+AREREFLKAVH CV+
Sbjct: 172 AAVVYTGDYNMTPDRHLGAAQIDRLKLDLLITESTYAKTVRDSKHAREREFLKAVHKCVS 231
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLDDYWERM++K+PIYFSAGLT+Q+N+YY++LI WT+Q +
Sbjct: 232 GGGKVLIPAFALGRAQELCILLDDYWERMNLKIPIYFSAGLTVQANMYYKMLIGWTSQKI 291
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
K++Y N FDFKHV +F+RS I GPCVLFATPGMISGG SL+VFK+WAPSEKNLV L
Sbjct: 292 KNSYTVHNPFDFKHVCHFERSFINNPGPCVLFATPGMISGGFSLEVFKKWAPSEKNLVTL 351
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMSGK K+ +DK T IDVRCQIH LSFS HTD+KGIMDL + +SP H
Sbjct: 352 PGYCVAGTIGHKLMSGKPTKVDIDKDTHIDVRCQIHQLSFSPHTDSKGIMDLTEFLSPNH 411
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFL 876
+LVHGEKP+M LK RI +ELGI PANNE++ +P+ +K+N T++F+
Sbjct: 412 VILVHGEKPQMAFLKERIESELGIQCCYPANNESVTIPTTQNLKINATEKFI 463
>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Brachypodium distachyon]
Length = 553
Score = 446 bits (1146), Expect = e-122
Identities = 221/349 (63%), Positives = 273/349 (78%)
Frame = +1
Query: 1 SSVVYTGDYNMTPDRHLGSAQIDRLFPDLLITESTYAITIRDSKYAREREFLKAVHTCVA 180
+++VYTGDYNMTPDRHLG+AQI+RL DLLITESTYA TIRDSK+AREREFLKAVH CV+
Sbjct: 174 AAMVYTGDYNMTPDRHLGAAQIERLKLDLLITESTYAKTIRDSKHAREREFLKAVHKCVS 233
Query: 181 AGGKVLIPVFALGRAQELCILLDDYWERMSIKVPIYFSAGLTIQSNVYYQLLISWTNQNV 360
GGKVLIP FALGRAQELCILLDDYWERM++K+PIYFSAGLTIQ+N+YY++LI WT+Q +
Sbjct: 234 EGGKVLIPTFALGRAQELCILLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKI 293
Query: 361 KDTYASRNKFDFKHVVNFDRSLIKASGPCVLFATPGMISGGLSLDVFKEWAPSEKNLVAL 540
KD+Y +N FDFKHV +F+RS I GPCVLFATPGMISGG SL+VFK WA S+KNLV L
Sbjct: 294 KDSYTVQNPFDFKHVCHFERSFINDPGPCVLFATPGMISGGFSLEVFKRWATSDKNLVTL 353
Query: 541 PGYCVAGTVGHKLMSGKAKKIKLDKRTEIDVRCQIHVLSFSAHTDAKGIMDLVKQVSPKH 720
PGYCVAGT+GHKLMSGK +I +DK T +DVRCQIH LSFS HTD+KGIMDL + +SP H
Sbjct: 354 PGYCVAGTIGHKLMSGKPTRIDIDKDTHVDVRCQIHQLSFSPHTDSKGIMDLTEFLSPNH 413
Query: 721 TVLVHGEKPKMTVLKARIYTELGIPSYAPANNETIEVPSGHQIKVNVTKEFLKRNVELVE 900
+LVHGEKP+M LK RI +ELG+ Y PANNET+ +P+ +K++ T++F+ N ++
Sbjct: 414 VILVHGEKPQMAFLKDRIESELGMSCYYPANNETVSIPTTQNMKISATEKFI-TNCAALQ 472
Query: 901 QCNQNVLSNLDYNIHDLESLQEVMVQDRIPVEGNAIVESGQKIKIHFSD 1047
+ S+L +IH L V +R+ EG ++E + KI D
Sbjct: 473 ARDSLQKSDLISSIH----LSGVNEDERL-AEGILLMEKSKAPKILCED 516