BLASTX nr result
ID: Ephedra25_contig00006995
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00006995 (514 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACN40327.1| unknown [Picea sitchensis] 126 3e-27 ref|XP_006878648.1| hypothetical protein AMTR_s00011p00264930 [A... 62 6e-08 ref|XP_002319234.2| hypothetical protein POPTR_0013s07280g [Popu... 56 6e-06 >gb|ACN40327.1| unknown [Picea sitchensis] Length = 1070 Score = 126 bits (316), Expect = 3e-27 Identities = 71/152 (46%), Positives = 98/152 (64%), Gaps = 1/152 (0%) Frame = +3 Query: 3 LLQEDGSEIISPKYASNTSSRNMQGSTSCSAQPAGLSRSGRNHSVTQATSSTNLNTHGGR 182 L QEDGS+IISPK S+ R+ QGS+S S+ AG+ RSGR++ QA+SS+N N R Sbjct: 819 LFQEDGSDIISPKSGSSGVVRSGQGSSSSSSSGAGIGRSGRSYPQCQASSSSNPNVQ--R 876 Query: 183 SNGIQQGYGSYDGSPP-VHAIQPGYGRAMPKPLHHGLYSVQQSSPSRLGQQGSHFFPQNY 359 NG Q GY + +GSPP H +QPGY R+M KPLHHG YS Q+ SRLGQQ S F Q++ Sbjct: 877 LNGCQ-GYVNLEGSPPSAHGMQPGYIRSMSKPLHHGSYSTPQNPLSRLGQQSSQIFQQHF 935 Query: 360 PNHNLPHSMMNANHRMQPDTVGFYPQHKNASM 455 P SM+N + ++ + G H+++++ Sbjct: 936 QYQYHPQSMLNPDQQLVSNAFGQLHIHQSSNV 967 >ref|XP_006878648.1| hypothetical protein AMTR_s00011p00264930 [Amborella trichopoda] gi|548831991|gb|ERM94793.1| hypothetical protein AMTR_s00011p00264930 [Amborella trichopoda] Length = 963 Score = 62.4 bits (150), Expect = 6e-08 Identities = 44/116 (37%), Positives = 55/116 (47%), Gaps = 1/116 (0%) Frame = +3 Query: 3 LLQEDGSEIISPKYASNTSSRNMQGSTSCSAQPAGLSRSGRNHSVTQATSSTNLNTHGGR 182 LLQE+GS+ S A R +S A NH T +SS R Sbjct: 786 LLQEEGSDSSSLSSAPVLGGRPSHPPSSTFLTGAIRPHRSGNHPPTSTSSSFP----DQR 841 Query: 183 SNGIQQGYGSYDGSPPV-HAIQPGYGRAMPKPLHHGLYSVQQSSPSRLGQQGSHFF 347 +NG Q YG +G PP+ + +Q GYG KPLHH +SPSRLGQQ SH + Sbjct: 842 ANGPFQAYGYAEGFPPLPYNMQAGYGHLNSKPLHHMPLLAPHNSPSRLGQQTSHHY 897 >ref|XP_002319234.2| hypothetical protein POPTR_0013s07280g [Populus trichocarpa] gi|550325183|gb|EEE95157.2| hypothetical protein POPTR_0013s07280g [Populus trichocarpa] Length = 966 Score = 55.8 bits (133), Expect = 6e-06 Identities = 56/181 (30%), Positives = 79/181 (43%), Gaps = 15/181 (8%) Frame = +3 Query: 3 LLQEDGSEIISPKYASNTSSRNMQGSTSCSAQPAGLSRSGRNHSVTQATSSTNLNTHGGR 182 LLQEDGS++ S + S G G+ RS R + SS++LN + Sbjct: 798 LLQEDGSDVSSISTEFSNSVHLGSG-----VPVVGVGRSNRASNA----SSSSLN----Q 844 Query: 183 SNGIQQGYGSYD-GSPP-VHAIQPGYGRAMPKPLHHGLYSVQQSSPSRLGQQGSHFFPQN 356 NG + D GSPP H + GYGR+M KP + + + Q+SPSRLGQQ F Sbjct: 845 RNGPFHAFSHVDAGSPPSAHDLHAGYGRSMSKPSYFTPH-ISQNSPSRLGQQPPQRFSHG 903 Query: 357 YP-------NH---NLPHSMMNANHRMQPDTVGF---YPQHKNASMSILPPATGEGAQAE 497 P NH P S N+ + P + P + A+ + +PP + E Sbjct: 904 RPTVRGSEWNHIKVQPPSSSFNSGGQRSPGSSSLNNSMPWGRRANFNSIPPPSRGRKDFE 963 Query: 498 R 500 R Sbjct: 964 R 964