BLASTX nr result

ID: Ephedra25_contig00006995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006995
         (514 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40327.1| unknown [Picea sitchensis]                             126   3e-27
ref|XP_006878648.1| hypothetical protein AMTR_s00011p00264930 [A...    62   6e-08
ref|XP_002319234.2| hypothetical protein POPTR_0013s07280g [Popu...    56   6e-06

>gb|ACN40327.1| unknown [Picea sitchensis]
          Length = 1070

 Score =  126 bits (316), Expect = 3e-27
 Identities = 71/152 (46%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
 Frame = +3

Query: 3    LLQEDGSEIISPKYASNTSSRNMQGSTSCSAQPAGLSRSGRNHSVTQATSSTNLNTHGGR 182
            L QEDGS+IISPK  S+   R+ QGS+S S+  AG+ RSGR++   QA+SS+N N    R
Sbjct: 819  LFQEDGSDIISPKSGSSGVVRSGQGSSSSSSSGAGIGRSGRSYPQCQASSSSNPNVQ--R 876

Query: 183  SNGIQQGYGSYDGSPP-VHAIQPGYGRAMPKPLHHGLYSVQQSSPSRLGQQGSHFFPQNY 359
             NG Q GY + +GSPP  H +QPGY R+M KPLHHG YS  Q+  SRLGQQ S  F Q++
Sbjct: 877  LNGCQ-GYVNLEGSPPSAHGMQPGYIRSMSKPLHHGSYSTPQNPLSRLGQQSSQIFQQHF 935

Query: 360  PNHNLPHSMMNANHRMQPDTVGFYPQHKNASM 455
                 P SM+N + ++  +  G    H+++++
Sbjct: 936  QYQYHPQSMLNPDQQLVSNAFGQLHIHQSSNV 967


>ref|XP_006878648.1| hypothetical protein AMTR_s00011p00264930 [Amborella trichopoda]
            gi|548831991|gb|ERM94793.1| hypothetical protein
            AMTR_s00011p00264930 [Amborella trichopoda]
          Length = 963

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 44/116 (37%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3    LLQEDGSEIISPKYASNTSSRNMQGSTSCSAQPAGLSRSGRNHSVTQATSSTNLNTHGGR 182
            LLQE+GS+  S   A     R     +S     A       NH  T  +SS        R
Sbjct: 786  LLQEEGSDSSSLSSAPVLGGRPSHPPSSTFLTGAIRPHRSGNHPPTSTSSSFP----DQR 841

Query: 183  SNGIQQGYGSYDGSPPV-HAIQPGYGRAMPKPLHHGLYSVQQSSPSRLGQQGSHFF 347
            +NG  Q YG  +G PP+ + +Q GYG    KPLHH       +SPSRLGQQ SH +
Sbjct: 842  ANGPFQAYGYAEGFPPLPYNMQAGYGHLNSKPLHHMPLLAPHNSPSRLGQQTSHHY 897


>ref|XP_002319234.2| hypothetical protein POPTR_0013s07280g [Populus trichocarpa]
            gi|550325183|gb|EEE95157.2| hypothetical protein
            POPTR_0013s07280g [Populus trichocarpa]
          Length = 966

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 56/181 (30%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
 Frame = +3

Query: 3    LLQEDGSEIISPKYASNTSSRNMQGSTSCSAQPAGLSRSGRNHSVTQATSSTNLNTHGGR 182
            LLQEDGS++ S     + S     G         G+ RS R  +     SS++LN    +
Sbjct: 798  LLQEDGSDVSSISTEFSNSVHLGSG-----VPVVGVGRSNRASNA----SSSSLN----Q 844

Query: 183  SNGIQQGYGSYD-GSPP-VHAIQPGYGRAMPKPLHHGLYSVQQSSPSRLGQQGSHFFPQN 356
             NG    +   D GSPP  H +  GYGR+M KP +   + + Q+SPSRLGQQ    F   
Sbjct: 845  RNGPFHAFSHVDAGSPPSAHDLHAGYGRSMSKPSYFTPH-ISQNSPSRLGQQPPQRFSHG 903

Query: 357  YP-------NH---NLPHSMMNANHRMQPDTVGF---YPQHKNASMSILPPATGEGAQAE 497
             P       NH     P S  N+  +  P +       P  + A+ + +PP +      E
Sbjct: 904  RPTVRGSEWNHIKVQPPSSSFNSGGQRSPGSSSLNNSMPWGRRANFNSIPPPSRGRKDFE 963

Query: 498  R 500
            R
Sbjct: 964  R 964


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