BLASTX nr result
ID: Ephedra25_contig00006907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00006907
(882 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003521427.1| PREDICTED: polyadenylate-binding protein 7-l... 65 3e-08
ref|XP_003625734.1| Polyadenylate binding protein [Medicago trun... 65 4e-08
ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trich... 60 8e-07
ref|XP_006374904.1| hypothetical protein POPTR_0014s02550g [Popu... 59 2e-06
ref|XP_002327166.1| predicted protein [Populus trichocarpa] 59 2e-06
gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella... 59 3e-06
ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Bran... 58 4e-06
ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-l... 57 7e-06
ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [... 57 9e-06
ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 i... 57 9e-06
gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes] 57 9e-06
>ref|XP_003521427.1| PREDICTED: polyadenylate-binding protein 7-like [Glycine max]
Length = 632
Score = 65.1 bits (157), Expect = 3e-08
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 11/224 (4%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYY--APNHFLHI 184
KPLYV +AQRKE R+A LQ QYA + +S P+ + ++PG Y YY A H+
Sbjct: 362 KPLYVALAQRKEDRKAQLQLQYAQQVAGLSGPSTA-----IIPGGYPPYYYAATGVISHV 416
Query: 185 -------HRTRECCKAMETNTFHDTFNKASHSAY-AYGNG*PRIRTPRSRMT-SPAAPQQ 337
++ N F S A N + R R R+ +P A
Sbjct: 417 PPRAGLMYQHLPMRPGWGANGFALPARSFQQSPVPAVSNNTRQHRQNRGRLNGNPIAQGN 476
Query: 338 GQLMTVLPTPVSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEAN 517
+T LP Q+S + Q+ KY+P+GR R+ K + + ++
Sbjct: 477 THSVTYLPQ-AQQISQPVISSSTQQRTGQAKYLPSGRQRDMEKGSGS----------SSS 525
Query: 518 GVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLK 649
G + +G E L + LA A P +K++LGE LY V LK
Sbjct: 526 GSNSGRGSQGS--EMLHSMLAGAAPEQQKEILGEHLYMLVHKLK 567
>ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
gi|355500749|gb|AES81952.1| Polyadenylate binding
protein [Medicago truncatula]
Length = 613
Score = 64.7 bits (156), Expect = 4e-08
Identities = 69/224 (30%), Positives = 99/224 (44%), Gaps = 11/224 (4%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYT----VYYAPNHFL 178
KPLYV++AQRKE R+A LQ QYA + ++ P+ + G P YT V +AP
Sbjct: 360 KPLYVSLAQRKEDRQAQLQLQYAQQIAGLAGPSTAIVPGGYPPFYYTATGVVSHAPPRAG 419
Query: 179 HIHRTRECCKAMETNTFHDTFN--KASHSAYAYGNG*PRIRTPRSRMTSPAAPQQGQLMT 352
+++ N + S + N + R R RM A QG +
Sbjct: 420 LVYQPMALRPGWRANGSAPPARSFQQSPTPVVSNNNTRQHRQNRGRMNGHAV-SQGNTHS 478
Query: 353 VLPTPVSQLSYKDA-----APHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEAN 517
P +Q + + A + QQR Q+ KYVP+GR RE K + L ++
Sbjct: 479 GTYMPQAQQASQSAISSRESSTQQRTGQA-KYVPSGRHREMEKGSG----------LSSS 527
Query: 518 GVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLK 649
G S E L + LA A P +K++LGE LY VQ +K
Sbjct: 528 GGS-------LGPEVLHSMLANATPEQQKEILGEHLYMLVQKIK 564
>ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein
TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 60.5 bits (145), Expect = 8e-07
Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 8/220 (3%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPA--------ISTNGGSVLPGAYTVYYAP 166
KPLYV +AQRKE R+A L QY M + P + GG +PG +
Sbjct: 371 KPLYVALAQRKEDRKAQLAAQYVQRMSTLRIPQPGQPGVNQMFQQGGYYMPGMHQGQQQQ 430
Query: 167 NHFLHIHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIRTPRSRMTSPAAPQQGQL 346
F + T++ N S+Y G ++ R + QGQ
Sbjct: 431 QRF---YATQQMPARPRWQNQQMMRNSGGGSSYGGIGGGSQMGRGRGMRFAGVPRSQGQ- 486
Query: 347 MTVLPTPVSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVS 526
++ P Q+ + V N P K +N Q +
Sbjct: 487 -------------QNVNPSQRSAAANAALVSNQPRHPPYKHSNV---RNIPPQAPSQANH 530
Query: 527 HTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGL 646
T ++ ++L+T+L++ D P +KQ+LGE LYPRV+ +
Sbjct: 531 QTRAQPAQDADNLTTHLSQVDEPQQKQILGEKLYPRVEAI 570
>ref|XP_006374904.1| hypothetical protein POPTR_0014s02550g [Populus trichocarpa]
gi|550323213|gb|ERP52701.1| hypothetical protein
POPTR_0014s02550g [Populus trichocarpa]
Length = 651
Score = 58.9 bits (141), Expect = 2e-06
Identities = 61/243 (25%), Positives = 90/243 (37%), Gaps = 24/243 (9%)
Frame = +2
Query: 2 LKEKPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYYAPNHFLH 181
L KPLYV +AQRKE RRA LQ Q++ + P AP++++ PGA
Sbjct: 378 LISKPLYVALAQRKEERRARLQAQFSQMRPVTMAPSVASRMPMYPPGA------------ 425
Query: 182 IHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIRTPRS-----RMTSPAAPQQGQL 346
+ YG G P + P++ + P G
Sbjct: 426 ---------------------PGMGQQFLYGQGPPAMMPPQAGFGYQQQLVPGMRPGGAP 464
Query: 347 MTVLPTPVSQLSYKDAAPHQQR------------PWQSGKYVPNGRV-REPVKTTNAVVP 487
M P+ Q + P +R P + +P GRV R P VP
Sbjct: 465 MPNFFVPLVQQGQQGQRPGGRRGGGPVQQTQQPVPLMQQQMLPRGRVYRYPPGRNMPDVP 524
Query: 488 ------GKYHQQLEANGVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLK 649
G + G+ + + +L+T LA A P ++ MLGE LYP V L+
Sbjct: 525 MPGVAGGMLSVPYDMGGMPIRDAAQPMPITALATALANATPEQQRTMLGESLYPIVDQLE 584
Query: 650 EEN 658
++
Sbjct: 585 HDS 587
>ref|XP_002327166.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 58.9 bits (141), Expect = 2e-06
Identities = 61/243 (25%), Positives = 90/243 (37%), Gaps = 24/243 (9%)
Frame = +2
Query: 2 LKEKPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAISTNGGSVLPGAYTVYYAPNHFLH 181
L KPLYV +AQRKE RRA LQ Q++ + P AP++++ PGA
Sbjct: 359 LISKPLYVALAQRKEERRARLQAQFSQMRPVTMAPSVASRMPMYPPGA------------ 406
Query: 182 IHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIRTPRS-----RMTSPAAPQQGQL 346
+ YG G P + P++ + P G
Sbjct: 407 ---------------------PGMGQQFLYGQGPPAMMPPQAGFGYQQQLVPGMRPGGAP 445
Query: 347 MTVLPTPVSQLSYKDAAPHQQR------------PWQSGKYVPNGRV-REPVKTTNAVVP 487
M P+ Q + P +R P + +P GRV R P VP
Sbjct: 446 MPNFFVPLVQQGQQGQRPGGRRGGGPVQQTQQPVPLMQQQMLPRGRVYRYPPGRNMPDVP 505
Query: 488 ------GKYHQQLEANGVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGLK 649
G + G+ + + +L+T LA A P ++ MLGE LYP V L+
Sbjct: 506 MPGVAGGMLSVPYDMGGMPIRDAAQPMPITALATALANATPEQQRTMLGESLYPIVDQLE 565
Query: 650 EEN 658
++
Sbjct: 566 HDS 568
>gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 58.5 bits (140), Expect = 3e-06
Identities = 68/226 (30%), Positives = 93/226 (41%), Gaps = 14/226 (6%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAISTNGGSVL--PGAYTVYYAPNHFLHI 184
KPLYV +AQRKE R+AHL QY M I+ + G + + PG T Y+ P
Sbjct: 362 KPLYVALAQRKEDRKAHLAAQY---MQRIAGMRMQGQGVNQIFGPGG-TGYFVPT-MAQT 416
Query: 185 HR------TRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIRTPRSRMTSPAAPQQGQL 346
R T+ + T + +A + YA G +R PR A +
Sbjct: 417 QRGGFYAPTQIAPQVRSTPRWQAPNPRAQTAGYAQLPGSGPMRNPRPNTQQVRAGANSRP 476
Query: 347 MTVLPTPVSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAV------VPGKYHQQL 508
+T ++ RP Q G G+ R P K T AV VPG Q
Sbjct: 477 ITG--------EFRMPGAQVNRPAQPGAMQAGGQQRAPFKYTQAVRNATGQVPGGAAQPQ 528
Query: 509 EANGVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGL 646
V V +G+ + S LA A P +KQMLGE L+P +Q +
Sbjct: 529 AQTAV----VIQGQEPLTASM-LAAAAPQEQKQMLGERLFPLIQSM 569
>ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
gi|229287666|gb|EEN58369.1| hypothetical protein
BRAFLDRAFT_234358 [Branchiostoma floridae]
Length = 620
Score = 58.2 bits (139), Expect = 4e-06
Identities = 57/214 (26%), Positives = 81/214 (37%), Gaps = 4/214 (1%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAISTN----GGSVLPGAYTVYYAPNHFL 178
KPLYV +AQRKE R+A L +QY M + PA N G S + Y P+
Sbjct: 364 KPLYVALAQRKEDRKAQLASQYMQRMAGMRMPAPQPNQMFQGSSYFMPSMQPRYFPSQMA 423
Query: 179 HIHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIRTPRSRMTSPAAPQQGQLMTVL 358
+ + +A A + A G+ P PR+ + +
Sbjct: 424 QVRASPRWQQAAPMRPGGQA--TAFQAMPAAGSRFPAATAPRAAAAAVRQVAPQAMARTT 481
Query: 359 PTPVSQLSYKDAAPHQQRPWQSGKYVPNGRVREPVKTTNAVVPGKYHQQLEANGVSHTMV 538
P +++ + AA Q+P KY R A+ P H Q +
Sbjct: 482 QPPAQRMAGRVAAMANQQPRPGYKYTATMRNPPSGGQPQAMNPSAVHVQGQE-------- 533
Query: 539 PEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQ 640
ST LA A P +KQMLGE L+P +Q
Sbjct: 534 ------PLTSTMLAAAPPQEQKQMLGERLFPLIQ 561
>ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 57.4 bits (137), Expect = 7e-06
Identities = 65/233 (27%), Positives = 89/233 (38%), Gaps = 23/233 (9%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAIST--NGGSVLPGAYTV---------- 154
KPLYV +AQRKE R+AHL QY + + A +T N PG Y +
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGYFMPAVPQAQNRP 420
Query: 155 -YYAPNHFLHIHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIR--TPRSRMTS-- 319
YYAPN + + F N S P +R TP S +
Sbjct: 421 PYYAPNQIAQMRPNPRWQQGGRPQGFQGVPNTIRQSGPC-----PALRHLTPASNTQASR 475
Query: 320 --PAAPQQGQLMTVLPTPVSQLSYKDAAPHQQRPWQSGKYVPNGR----VREPVKTTNAV 481
P PQ+ + T + + S AP P+ KY N R +P++T
Sbjct: 476 GLPTTPQRVGVPTAVQNLSPRPSVATPAPRAVPPY---KYAANVRSPHPAIQPLQTPQPA 532
Query: 482 VPGKYHQQLEANGVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQ 640
V + + L A + LA A P +KQMLGE L+P +Q
Sbjct: 533 VHVQGQEPLTA------------------SMLAAAPPQEQKQMLGERLFPLIQ 567
>ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 57.0 bits (136), Expect = 9e-06
Identities = 65/233 (27%), Positives = 89/233 (38%), Gaps = 23/233 (9%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAIST--NGGSVLPGAYTV---------- 154
KPLYV +AQRKE R+AHL QY + + A +T N PG Y +
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGYFMPAVPQAQNRP 420
Query: 155 -YYAPNHFLHIHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIR--TPRSRMTS-- 319
YYAPN + + F N S P +R TP S +
Sbjct: 421 PYYAPNQIAQMRPNPRWQQGGRPQGFQGVPNAIRQSGPR-----PTLRHLTPASNTQASR 475
Query: 320 --PAAPQQGQLMTVLPTPVSQLSYKDAAPHQQRPWQSGKYVPNGR----VREPVKTTNAV 481
P PQ+ + T + + S AP P+ KY N R +P++T
Sbjct: 476 GLPTTPQRVGVPTAVQNLSPRPSVATPAPRAVPPY---KYAANVRSPHPAIQPLQTPQPA 532
Query: 482 VPGKYHQQLEANGVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQ 640
V + + L A + LA A P +KQMLGE L+P +Q
Sbjct: 533 VHVQGQEPLTA------------------SMLAAAPPQEQKQMLGERLFPLIQ 567
>ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 57.0 bits (136), Expect = 9e-06
Identities = 65/233 (27%), Positives = 89/233 (38%), Gaps = 23/233 (9%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAIST--NGGSVLPGAYTV---------- 154
KPLYV +AQRKE R+AHL QY + + A +T N PG Y +
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPTPGGYFMPAVPQAQNRP 420
Query: 155 -YYAPNHFLHIHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIR--TPRSRMTS-- 319
YYAPN + + F N S P +R TP S +
Sbjct: 421 PYYAPNQIAQMRPNPRWQQGGRPQGFQGVPNTIRQSGPR-----PALRHLTPASNTQASR 475
Query: 320 --PAAPQQGQLMTVLPTPVSQLSYKDAAPHQQRPWQSGKYVPNGR----VREPVKTTNAV 481
P PQ+ + T + + S AP P+ KY N R +P++T
Sbjct: 476 GLPTTPQRVGVPTAVQNLSPRPSVATPAPRAVPPY---KYAANVRSPHPAIQPLQTPQPA 532
Query: 482 VPGKYHQQLEANGVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQ 640
V + + L A + LA A P +KQMLGE L+P +Q
Sbjct: 533 VHVQGQEPLTA------------------SMLAAAPPQEQKQMLGERLFPLIQ 567
>gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 57.0 bits (136), Expect = 9e-06
Identities = 61/226 (26%), Positives = 84/226 (37%), Gaps = 14/226 (6%)
Frame = +2
Query: 11 KPLYVNIAQRKEVRRAHLQTQYAHVMPAISAPAIST-------NGGSVLPGA-----YTV 154
KPLYV +AQRKE R+AHL QY + + A +T G +P T
Sbjct: 361 KPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANTIINQFQPTSGYFMPAVPQAQNRTT 420
Query: 155 YYAPNHFLHIHRTRECCKAMETNTFHDTFNKASHSAYAYGNG*PRIRTPRSRMTSPAAPQ 334
YYAPN + + F N G R TP S P
Sbjct: 421 YYAPNQLAQMRPNPRWQQQGGRGGFQGMPNTLRQPG---PRGNMRQMTPNSSSQGP---- 473
Query: 335 QGQLMTVLPTPVSQLSYKDAAPHQQRPWQ--SGKYVPNGRVREPVKTTNAVVPGKYHQQL 508
+G T+ P P S P P++ +G PN +V +P+ V + + L
Sbjct: 474 RGSAQTMAPRP----SMGVPGPRNVTPYKYATGVRNPNPQVVQPIALQQPAVHVQGQEPL 529
Query: 509 EANGVSHTMVPEGKNLESLSTNLAKADPPSRKQMLGEFLYPRVQGL 646
+ LA A P +KQMLGE L+P +Q +
Sbjct: 530 ------------------TPSMLAAAPPQEQKQMLGERLFPLIQAM 557