BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006857
         (1641 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily p...   201   1e-48
gb|ABR18022.1| unknown [Picea sitchensis]                             198   5e-48
ref|XP_004229380.1| PREDICTED: pentatricopeptide repeat-containi...   195   5e-47
ref|XP_002889397.1| pentatricopeptide repeat-containing protein ...   193   2e-46
ref|XP_002301516.2| pentatricopeptide repeat-containing family p...   192   5e-46
ref|XP_004956425.1| PREDICTED: pentatricopeptide repeat-containi...   192   5e-46
ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containi...   191   8e-46
ref|XP_006418350.1| hypothetical protein EUTSA_v10007036mg [Eutr...   189   4e-45
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   189   4e-45
dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgar...   188   5e-45
ref|XP_006483923.1| PREDICTED: pentatricopeptide repeat-containi...   187   1e-44
ref|XP_006438303.1| hypothetical protein CICLE_v10031342mg [Citr...   187   1e-44
dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]    187   1e-44
ref|XP_004509657.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-44
ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-44
ref|XP_004296672.1| PREDICTED: pentatricopeptide repeat-containi...   186   3e-44
ref|NP_001168310.1| hypothetical protein [Zea mays] gi|223947377...   185   4e-44
ref|XP_004508130.1| PREDICTED: pentatricopeptide repeat-containi...   185   6e-44
ref|XP_004290659.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-43
ref|NP_171739.1| pentatricopeptide repeat-containing protein [Ar...   184   1e-43

>gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 501

 Score =  201 bits (510), Expect = 1e-48
 Identities = 126/402 (31%), Positives = 201/402 (50%), Gaps = 4/402 (0%)
 Frame = -1

Query: 1218 IEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAE 1039
            ++ LR   RY+ +L + +WM+ R                  D AI LDLIAK +GI+AAE
Sbjct: 78   VKELRKYRRYQHALDIMDWMERRNL-----------HLSHVDHAIRLDLIAKTKGIDAAE 126

Query: 1038 DFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYL 859
            ++   LP   +N +TY ALL+CYC             K+ + L F  N LP+ N+M LY+
Sbjct: 127  NYLSALPPSAKNQLTYGALLNCYCNNLMKDKASSLFQKMDE-LRFTNNTLPFNNLMCLYM 185

Query: 858  SLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHW 679
             L +PEKV  LVD +K+  +      Y +WM + A ++D + ++ ++E   +    K  W
Sbjct: 186  RLGQPEKVPELVDELKLRNIPRCRFTYVVWMQSYANLNDIEGVERVLEELAQDSEDKCTW 245

Query: 678  TTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQS 499
            TTY+NL  IY+K G  EKA +  + LE D+    REAY+ LI  Y   ++   + RVW++
Sbjct: 246  TTYNNLAAIYVKAGLFEKAEACLKKLEKDMMPRQREAYHFLISLYAGTSNLAEVHRVWEA 305

Query: 498  LKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXXX 319
            LK     +  ++Y  M +AL  LKD++G +  F EW S+  A D  L+ S ++ Y+    
Sbjct: 306  LKRAFSTVTNTSYLVMVQALAKLKDLEGLKKCFAEWESSCSAYDIRLATSTIRGYLSGDL 365

Query: 318  XXXXXXXXAKFTDCEMDSRKWEVVAEIFLRY---NC-IDKALEMITHGFAELKWVYASPW 151
                          +     +  V E+F+ Y    C  D AL+ +    +E+       W
Sbjct: 366  LEEAELVLG--NAMKRSKGPFHKVRELFMVYFLEKCQFDLALQHVEAVVSEM-----GDW 418

Query: 150  APKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYH 25
             P  + + +  +Y+ ++ DVDAAE+  ++L        +AYH
Sbjct: 419  RPAPETITAFFDYFMKERDVDAAEEFCRILKSKNGLDSNAYH 460


>gb|ABR18022.1| unknown [Picea sitchensis]
          Length = 561

 Score =  198 bits (504), Expect = 5e-48
 Identities = 123/408 (30%), Positives = 210/408 (51%), Gaps = 6/408 (1%)
 Frame = -1

Query: 1230 MRAIIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGI 1051
            +R I+  LR   R++ +L+V EWM ++   +             GD A+ L LIAKV GI
Sbjct: 129  LREIVRELRKYYRHKHALEVFEWMSKKFPCSV------------GDRAMHLGLIAKVHGI 176

Query: 1050 EAAEDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMM 871
             +AE ++ +L   ++N +TY ALL+CY              ++ K LGF K   PY  MM
Sbjct: 177  ASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSEAIMEEL-KDLGFIKTAFPYTEMM 235

Query: 870  SLYLSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNG 691
            +LY++  + EKV  ++  MK  G+ ++   YN+WM + AA+SD D + E+     +  N 
Sbjct: 236  TLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSYAALSDMDQVAEVFNEIERDDNI 295

Query: 690  KLHWTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPRE----AYNRLIKYYGLLNDEK 523
               W+ YS L NIY+     +KA S  + +EN + +   +    AYN LI  +G L ++ 
Sbjct: 296  NTDWSIYSTLANIYINAKVLDKAGSALKEMENKMKEIETKKDQLAYNHLISLHGRLGNKD 355

Query: 522  SLFRVWQSLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFL 343
             ++R+WQS +     +   +Y  +  +L+ + DI+GA+    +W S +   D  +  + L
Sbjct: 356  EVYRIWQSFELAFPKMTNRSYVCLLSSLVGMGDIEGAEVFIKKWESMKTFDDSRIYYALL 415

Query: 342  KSYIXXXXXXXXXXXXAKFTD--CEMDSRKWEVVAEIFLRYNCIDKALEMITHGFAELKW 169
             +YI             +  D   + +++ WE +AE +++   I KA+E +      L  
Sbjct: 416  NAYIEKGWLQKAELLLERVVDKGGKPNAKTWETLAEGYIQNEQIHKAMEAMKR---SLSI 472

Query: 168  VYASPWAPKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYH 25
               SPW PK+ NVL++L +++++ DV +AE+  K+L   K  S + Y+
Sbjct: 473  EGNSPWQPKSVNVLALLKHFEKQGDVKSAEEFFKILRGVKFVSTEIYN 520


>ref|XP_004229380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Solanum lycopersicum]
          Length = 495

 Score =  195 bits (495), Expect = 5e-47
 Identities = 134/453 (29%), Positives = 223/453 (49%), Gaps = 6/453 (1%)
 Frame = -1

Query: 1365 AERSPRDAHLARQRKKFVSNAISAENTLDFLKKAEDNMMYLHPGDMRAIIEGLRGMSRYE 1186
            AE+S RD+ L R+     +   S   T++   + E  ++  +  ++   I+ LR   RY+
Sbjct: 25   AEQSGRDSRLYRRLSALGATKGSVTETINAYTR-EGRVVKKY--ELEKCIKELRKYKRYQ 81

Query: 1185 KSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAEDFFEELPSEKR 1006
             +L++ EWM++R   N  +          GD  + LDLIAKV+GI AAE +F  L    +
Sbjct: 82   HALEIMEWMEKR-GINFSY----------GDYGVRLDLIAKVQGITAAEKYFGSLSPSMQ 130

Query: 1005 NFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYLSLNKPEKVLSL 826
            N  TY ALL+CYC             ++ + L F    L + N+MSLY+ L +PEKV  L
Sbjct: 131  NQSTYGALLNCYCVEKMTDKALTFFERMDQ-LKFTNRSLAFNNLMSLYMRLGQPEKVAPL 189

Query: 825  VDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHWTTYSNLINIYL 646
            V  MK   V +   +YN+WM++ + + D + ++ + E   ++   +  WTTYSNL   Y+
Sbjct: 190  VQEMKSRKVPLCTFSYNVWMNSYSCLDDIEGVERVFEELKQENAKECDWTTYSNLAVAYV 249

Query: 645  KGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQSLKEKCYHLNYS 466
            K G  EKA    + LE ++    R+AY+ LI  +  +++   ++R+W SLK     L  S
Sbjct: 250  KAGHNEKAELALKKLEEEMGPRNRQAYHYLISLHARISNLGEVYRIWGSLKSS-LDLTNS 308

Query: 465  NYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXXXXXXXXXXXAKF 286
            +Y  M ++L    D+ G +  ++EW S+    D  L+ + + +Y+             K 
Sbjct: 309  SYLVMLQSLSKHNDMDGLKKYYEEWESSCSTYDMRLANNVIGAYL----RHDMLNNAEKV 364

Query: 285  TDCEMDSRK------WEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWAPKADNVLS 124
              C +   +      WE+    +LR   I+ A + +    + +K    + W PK + + +
Sbjct: 365  FHCALKRSQGPFFLAWEMFMLFYLRKRQINFAQQCMEAIASRIK---ENKWRPKYETISN 421

Query: 123  ILNYYKEKADVDAAEKVLKLLSDHKCASIDAYH 25
             L Y+ E+ DVD AE+  K L    C S D Y+
Sbjct: 422  FLEYFVEEKDVDGAEEFYKFLKKVNCLSSDVYN 454


>ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297335239|gb|EFH65656.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 524

 Score =  193 bits (490), Expect = 2e-46
 Identities = 147/470 (31%), Positives = 229/470 (48%), Gaps = 13/470 (2%)
 Frame = -1

Query: 1419 GVVQARSRWSEALAPKVPAERSPRDAHLARQR---KKFVSNAISAENTLDFLKKAEDNMM 1249
            GVV+A S  S A A  V A   P     +RQR   KK    +++     + L +     +
Sbjct: 29   GVVEA-SVSSPAAANGVEAS-VPAPTAASRQRELYKKLSKLSVAGGTVAETLNQFIMEGI 86

Query: 1248 YLHPGDMRAIIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLI 1069
             +   D+    + LR   R++ +L++ +WM++R  T               D AI LDLI
Sbjct: 87   TVRKVDLFRCAKDLRKFRRHQHALEIFDWMEKRKMT-----------FSVSDHAIRLDLI 135

Query: 1068 AKVRGIEAAEDFFEEL-PSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNR 892
            AK +G+EAAE++F  L PS K +  TY AL++CYC             K+ + L F  N 
Sbjct: 136  AKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAKAHFEKMDE-LNFVNNS 194

Query: 891  LPYVNMMSLYLSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVET 712
            LP+ NMMS+Y+ L++PEKV  LVD MK  G+    + Y++WM +C +++D D +++I++ 
Sbjct: 195  LPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDE 254

Query: 711  ATKKYNGKLHWTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLN 532
              K    K  W T+SNL  I+ K G  EKA S  + +E  ++   R++++ LI  Y  ++
Sbjct: 255  MGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNPNNRDSHHFLISLYAGIS 314

Query: 531  DEKSLFRVWQSLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSC 352
                ++RVW+SLK+    +N  +Y  M +A+  L DI G + IF EW S   A D  L+ 
Sbjct: 315  KGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIFTEWESKCWAYDMRLAN 374

Query: 351  SFLKSYIXXXXXXXXXXXXAKFTDCEMDSRKWEV-VAEIFLRYNCID--------KALEM 199
              + +Y+             K  D  M+  K     A   L  + ++        K LE 
Sbjct: 375  IAINTYL----KGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLENGKADLAMKHLET 430

Query: 198  ITHGFAELKWVYASPWAPKADNVLSILNYYKEKADVDAAEKVLKLLSDHK 49
                 AE K      W+  ++ V     ++K   DVD AE   K+LS+ K
Sbjct: 431  AVSDPAENK----DEWSWSSELVSLFFLHFKRAKDVDGAEDFCKILSNWK 476


>ref|XP_002301516.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550345391|gb|EEE80789.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 511

 Score =  192 bits (487), Expect = 5e-46
 Identities = 126/417 (30%), Positives = 203/417 (48%), Gaps = 15/417 (3%)
 Frame = -1

Query: 1233 DMRAIIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRG 1054
            ++   I+ LR   R++ +++V EWMQ+R        + +F+     D A+ LDL AK +G
Sbjct: 68   NLTTCIKKLRKYGRFDHAIEVMEWMQKR--------KMNFSHV---DHAVYLDLTAKTKG 116

Query: 1053 IEAAEDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNM 874
            I AAE++F+ LP   +N +TYS LL+CYC             K+ K +      +P+ N+
Sbjct: 117  IAAAENYFDNLPPSVQNHVTYSTLLNCYCKERMSEKALTLFEKMDK-MKLLSTSMPFSNL 175

Query: 873  MSLYLSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYN 694
            M+L++ L +PEKVL +V  MK  GV      YN+WM +   ++DF+ +  +++       
Sbjct: 176  MTLHMRLGQPEKVLDIVQEMKQRGVSPGTFTYNIWMQSYGCLNDFEGVQRVLDEMKTDGK 235

Query: 693  GKLHWTTYSNLINIYLKGGFPEKAYSYAEGLENDIS-------------DAPREAYNRLI 553
                WTTYSNL  IY+K G  +KA S    LE  I              DA REAY+ LI
Sbjct: 236  ENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGRDCDFQKKRRHDADREAYHFLI 295

Query: 552  KYYGLLNDEKSLFRVWQSLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMA 373
              Y   ++   + RVW SLK         +Y ++ +AL  LKD++G    F EW S+  +
Sbjct: 296  SLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVEGLLKCFKEWESSCHS 355

Query: 372  KDYELSCSFLKSYIXXXXXXXXXXXXAKFTDCE--MDSRKWEVVAEIFLRYNCIDKALEM 199
             D  L+   +++ +             +       +  +  E+    FL+ +  D AL+ 
Sbjct: 356  YDMRLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLKNHQPDLALKH 415

Query: 198  ITHGFAELKWVYASPWAPKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAY 28
            +   F+E K +    W P    V + LNY+++  DVD AE++ K+       + +AY
Sbjct: 416  MKAAFSEAKEI---EWQPDQKTVSAFLNYFEDGKDVDGAERLCKIWKQINRLNSNAY 469


>ref|XP_004956425.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150-like
            [Setaria italica]
          Length = 513

 Score =  192 bits (487), Expect = 5e-46
 Identities = 120/409 (29%), Positives = 203/409 (49%), Gaps = 2/409 (0%)
 Frame = -1

Query: 1221 IIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAA 1042
            I + LR   R+  +L+V +WM ER         RD       D AI LDLIAKVRG+  A
Sbjct: 115  IAKELRKFRRFNLALQVYDWMTER---------RDRFPLSSSDMAIQLDLIAKVRGVSHA 165

Query: 1041 EDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLY 862
            E +FEELP   ++  TY +LL+ Y              K+ KK GF  + LP   +M+ Y
Sbjct: 166  EKYFEELPDPLKDKRTYGSLLNVYAQAMMKDKTEDTFEKMRKK-GFASDTLPCNVLMNFY 224

Query: 861  LSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLH 682
            + + +P++V +++D MK   V  +   YN+W+ +CAA  D D ++ +        +   +
Sbjct: 225  VDVGEPDEVSAIIDEMKERNVSFDVCTYNIWIKSCAAKQDADEMERVFSQMIADESVIAN 284

Query: 681  WTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQ 502
            WTTY+ L ++Y+K G  EKA    +G E   +   ++ ++ LI  Y  L  ++ ++R+W 
Sbjct: 285  WTTYTTLASMYIKLGNSEKAEECLKGAEKRTTGRDKKCFHYLITLYSHLGKKEEVYRIWN 344

Query: 501  SLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXX 322
              K     ++   Y+ +  AL+ + DI+GA+ +++EW S   + D +     L  Y    
Sbjct: 345  WYKATFPTIHNLGYQEVLSALVRIGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREG 404

Query: 321  XXXXXXXXXAKFTDCEMDSR--KWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWA 148
                      +F +   + +   WE++A  +L+ N I +AL  +    A      AS W 
Sbjct: 405  LITKAEQIVNQFVEKGGNPKPNTWEILATAYLKDNKISEALSCMEKATAVKS---ASKWK 461

Query: 147  PKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYHKCASIDAY 1
            P+  NV S+L  +KEK D + A++++ +L+   CA  + Y    +  A+
Sbjct: 462  PRPTNVESLLASFKEKNDTEGADRLVSVLTSRGCAEDEEYKSLINTYAF 510


>ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Solanum tuberosum]
          Length = 495

 Score =  191 bits (485), Expect = 8e-46
 Identities = 133/448 (29%), Positives = 217/448 (48%), Gaps = 2/448 (0%)
 Frame = -1

Query: 1365 AERSPRDAHLARQRKKFVSNAISAENTLDFLKKAEDNMMYLHPGDMRAIIEGLRGMSRYE 1186
            AE+S RD+ L R+     +   S   T++   + E  ++  +  ++   I+ LR   RY+
Sbjct: 25   AEQSGRDSRLYRRLSALGATKGSVTETINAYTR-EGRVVKKY--ELEKCIKELRKYKRYQ 81

Query: 1185 KSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAEDFFEELPSEKR 1006
             +L++ EWM++R   N  +          GD  + LDLIAKV+GI AAE +F  L    +
Sbjct: 82   HALEIMEWMEKR-GINFSY----------GDYGVRLDLIAKVQGITAAEKYFGGLSPSMQ 130

Query: 1005 NFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYLSLNKPEKVLSL 826
            N  TY ALL+CYC             K+ + L F    L + N+MSLY+ L +PEKV  L
Sbjct: 131  NQSTYGALLNCYCVEKMADKALSFFEKMDQ-LKFTNKSLAFNNLMSLYMRLGQPEKVAPL 189

Query: 825  VDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHWTTYSNLINIYL 646
            V  MK   V +   +YN+WM++ + + D + ++ + E   ++   +  WTTYSNL   Y+
Sbjct: 190  VQEMKSRKVPLCTFSYNIWMNSYSCLDDIEGVERVFEELKQENAKECDWTTYSNLAVAYV 249

Query: 645  KGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQSLKEKCYHLNYS 466
            K G  EKA    + LE ++    R+AY+ LI  +  +++   ++R+W SLK     L  S
Sbjct: 250  KAGHNEKAELALKKLEEEMGPRNRQAYHYLISLHARISNLGEVYRIWGSLKSS-LDLTNS 308

Query: 465  NYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXXXXXXXXXXXAKF 286
            +Y  M ++L    D+ G +  ++EW S+    D  L+ + + +Y+               
Sbjct: 309  SYLVMLQSLSKHNDMDGLKKYYEEWESSCSTYDMRLANNVIGAYLRHDMLNNAEKVFHSA 368

Query: 285  TDCEMDS--RKWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWAPKADNVLSILNY 112
                       WE+    +LR   I+ A + +    + +K    + W PK + + + L Y
Sbjct: 369  LKRSQGPFFLAWEMFMLFYLRKRQINFAQQCMEAIASRIK---ENKWRPKYETISNFLEY 425

Query: 111  YKEKADVDAAEKVLKLLSDHKCASIDAY 28
            + E+ DVD AE   K L    C S D Y
Sbjct: 426  FVEEKDVDGAEDFYKFLKKVNCLSSDVY 453


>ref|XP_006418350.1| hypothetical protein EUTSA_v10007036mg [Eutrema salsugineum]
            gi|557096121|gb|ESQ36703.1| hypothetical protein
            EUTSA_v10007036mg [Eutrema salsugineum]
          Length = 645

 Score =  189 bits (479), Expect = 4e-45
 Identities = 131/393 (33%), Positives = 200/393 (50%), Gaps = 9/393 (2%)
 Frame = -1

Query: 1209 LRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAEDFF 1030
            LR   RY+ +L++ EWM+ R                  D AI LDLIAK RG+EAAE++F
Sbjct: 85   LRKFRRYQHALEIFEWMEMRKMA-----------VSASDHAIRLDLIAKTRGLEAAENYF 133

Query: 1029 EEL-PSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYLSL 853
             +L P  K +  TY AL++CYC             K+ + L F  N LP+ NMMS+Y+ +
Sbjct: 134  NKLEPCAKNHQSTYGALMNCYCVQLQEEKAKAHFEKMDE-LKFVNNSLPFSNMMSMYMRM 192

Query: 852  NKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHWTT 673
            ++PEKV  +VD MK  G+    + Y++WM +CA+ +DFD +++I+    K    K  W T
Sbjct: 193  SQPEKVPVVVDAMKQRGISPCRVTYSIWMQSCASSNDFDGLEKIIAEMGKDSEAKTTWNT 252

Query: 672  YSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQSLK 493
            +SNL  IY K G  E+A S  + +E  ++   R+A++ LI  Y  ++    + RVW+SLK
Sbjct: 253  FSNLAAIYTKAGLFEEAESALKSMEEKMNPNNRDAHHFLISLYAGISKASEVNRVWESLK 312

Query: 492  EKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYI-XXXXX 316
            +    +N  +Y  M +AL  L D+ G + IF EW S     D  L+   + +Y+      
Sbjct: 313  KAHPEINNMSYLVMLQALSSLGDVDGIKRIFTEWESKCQVYDMRLANIAINTYLKGNLYQ 372

Query: 315  XXXXXXXAKFTDCEMDSRKWEVVAEIFLRYN-CIDKA---LEMITHGFAELK--WVYASP 154
                        C+    K   +  I L  N  +D A   LE      A+++  W ++S 
Sbjct: 373  EAETILDGAMKKCKGPFSKARQLLMIHLLENGKVDSAMKHLEAAVSDSADIRDHWGWSS- 431

Query: 153  WAPKADNVLSILNYYKEKA-DVDAAEKVLKLLS 58
                   +LS+   + EKA DVD AEK+ ++LS
Sbjct: 432  ------ELLSLFFLHFEKAKDVDGAEKLCRILS 458



 Score = 68.9 bits (167), Expect = 6e-09
 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
 Frame = -1

Query: 1191 YEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAEDFFEEL-PS 1015
            Y   ++VSE +Q+ +    D  ++        D A+ L LIAK +G+EAAE +F  L PS
Sbjct: 491  YRNEMEVSEDIQDLLEKVFDSKEKRKVPFSVSDHAVRLHLIAKTKGLEAAESYFNNLDPS 550

Query: 1014 EKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYLSLNKPEKV 835
             K + + Y  L+HCYC             K+  +L F  N LP+  MMS+YL L +PE +
Sbjct: 551  AKNHELIYGTLMHCYCVELQEEKAKAHFEKM-DELNFVNNSLPFNYMMSMYLRLGQPEML 609

Query: 834  LSLVD 820
              L++
Sbjct: 610  DVLME 614


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
            gi|449518825|ref|XP_004166436.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  189 bits (479), Expect = 4e-45
 Identities = 125/409 (30%), Positives = 192/409 (46%), Gaps = 6/409 (1%)
 Frame = -1

Query: 1233 DMRAIIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRG 1054
            ++   I+ LR   RY   L++ EWM+ R       I   F      D A+ LDLI+KV G
Sbjct: 43   ELEKCIKELRKYRRYHHCLQIMEWMETRK------INYSFT-----DYALRLDLISKVNG 91

Query: 1053 IEAAEDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRK--NRLPYV 880
            + AAE +F +LP   +N  TY ALL+CYC              + KK+   K    L + 
Sbjct: 92   VTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALT----LFKKMDELKISTSLSFN 147

Query: 879  NMMSLYLSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKK 700
            N+M++Y+ ++ PEKV  L+  MK  G  +    YN+WM++CA+++D   ++EI+E    +
Sbjct: 148  NLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLNDIGKVEEILEEMKME 207

Query: 699  YNGKLHWTTYSNLINIYLKGGFPEKAYSYAEGLENDISD--APREAYNRLIKYYGLLNDE 526
               K  WTTYSNL + Y+K G  EKA    + LE ++      R  Y+ LI  Y   ++ 
Sbjct: 208  DRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKNDRLVYHCLISLYASTSNL 267

Query: 525  KSLFRVWQSLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSF 346
              + R+W +LK     +   +Y  M +AL  LKDI+G +  + EW S     D  +    
Sbjct: 268  SEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEWESNCRNFDLRIVNDI 327

Query: 345  LKSYIXXXXXXXXXXXXAKFTDCEMD--SRKWEVVAEIFLRYNCIDKALEMITHGFAELK 172
            + +Y+               T       SR  E+    FL+   +D A   +    +E K
Sbjct: 328  IGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKLKQVDSAFSHLESALSESK 387

Query: 171  WVYASPWAPKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYH 25
                  W P      + LNY++E+ DV+ AE   ++L   KC     YH
Sbjct: 388  ---EKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLDASGYH 433


>dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 505

 Score =  188 bits (478), Expect = 5e-45
 Identities = 117/409 (28%), Positives = 205/409 (50%), Gaps = 2/409 (0%)
 Frame = -1

Query: 1221 IIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAA 1042
            I   LR   R+  +L+V +WM +R         RD       D AI LDLIAKVRG+  A
Sbjct: 105  IARELRKFRRFNLALEVYDWMTDR---------RDRFSLSSSDMAIQLDLIAKVRGVPDA 155

Query: 1041 EDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLY 862
            E++FE+LP   ++  TY +LL+ Y              ++ KK GF  + LP+  +M+ Y
Sbjct: 156  EEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKK-GFATDTLPFNVLMNFY 214

Query: 861  LSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLH 682
            + + +PEKV ++ D MK   +  +   YN+W+  CAA+ D D+++ ++   T   +   +
Sbjct: 215  VDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVAN 274

Query: 681  WTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQ 502
            WTTY+ L ++++K    EKA    +  E   +   ++ ++ LI  Y  L  ++ ++R+W 
Sbjct: 275  WTTYTTLASMHIKLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWN 334

Query: 501  SLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXX 322
              K     ++   Y+ +  AL+ L DI+GA+ +++EW S   + D +     L  Y    
Sbjct: 335  WYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREG 394

Query: 321  XXXXXXXXXAKFTDCEMDSR--KWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWA 148
                      +F +   + +   WE++A  +L+ N + +AL  +    A      AS W 
Sbjct: 395  FVVKAQQTLNRFVEKGGNPKPNTWEILATAYLKDNQLSEALSCLEKATAVKS---ASKWR 451

Query: 147  PKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYHKCASIDAY 1
            P+  NV ++L Y+KEK D ++ ++++ +L    CA  + Y   + ID Y
Sbjct: 452  PRPTNVETLLAYFKEKNDTESVDRLMSVLRSRGCAENEEYK--SLIDTY 498


>ref|XP_006483923.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Citrus sinensis]
          Length = 490

 Score =  187 bits (475), Expect = 1e-44
 Identities = 126/455 (27%), Positives = 221/455 (48%), Gaps = 21/455 (4%)
 Frame = -1

Query: 1362 ERSPRDAHLARQRKKFVSNA------------ISAENTLDFLKKAEDNMMYLHPGDMRAI 1219
            +R  R  ++A++ KK +  A            +S    L+   K++  +     GD    
Sbjct: 5    QRFGRTKNIAKRSKKHLEEALYDRLFKKGSSDVSVRQQLNQFLKSKKRVFKWEVGDT--- 61

Query: 1218 IEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAE 1039
            ++ LR    Y  +LK+SE M++R            NKT   D AI LDL+AKV+GI+AAE
Sbjct: 62   LKKLRDRKLYYPALKLSENMEKR----------GMNKTVS-DQAIHLDLVAKVQGIDAAE 110

Query: 1038 DFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYL 859
            ++F +LP   +N +TY +LL+CYC             K+ K+L    + +P+ ++M+LY 
Sbjct: 111  NYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKM-KELNLGFSSMPFNSLMTLYA 169

Query: 858  SLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHW 679
                PEK+ +++  MK   +  +   YN+WM A AAV+D    + ++E   +       W
Sbjct: 170  KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229

Query: 678  TTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQS 499
            TT+SNL +IY++ G  EKA    + LEN  +     AY  LI  YG   +   ++R+W+S
Sbjct: 230  TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289

Query: 498  LKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXXX 319
            L+         +Y +M + L+ LKD+ GA+  F EW S     D  ++   + +Y     
Sbjct: 290  LRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKESR 349

Query: 318  XXXXXXXXAKF--TDCEMDSRKWEVVAEIFLR-------YNCIDKALEMITHGFAELKWV 166
                     +        +++ WE+ ++ +LR        +C++KA++    G  +    
Sbjct: 350  LENAEELKERARRRGANPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT---GRGD---- 402

Query: 165  YASPWAPKADNVLSILNYYKEKADVDAAEKVLKLL 61
                W P ++ + + + +++++ DVD AE  L++L
Sbjct: 403  -GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436


>ref|XP_006438303.1| hypothetical protein CICLE_v10031342mg [Citrus clementina]
            gi|557540499|gb|ESR51543.1| hypothetical protein
            CICLE_v10031342mg [Citrus clementina]
          Length = 490

 Score =  187 bits (475), Expect = 1e-44
 Identities = 126/455 (27%), Positives = 221/455 (48%), Gaps = 21/455 (4%)
 Frame = -1

Query: 1362 ERSPRDAHLARQRKKFVSNA------------ISAENTLDFLKKAEDNMMYLHPGDMRAI 1219
            +R  R  ++A++ KK +  A            +S    L+   K++  +     GD    
Sbjct: 5    QRFGRTKNIAKRSKKHLEEALYDRLFKKGGSDVSVRQQLNQFLKSKKRVFKWEVGDT--- 61

Query: 1218 IEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAE 1039
            ++ LR    Y  +LK+SE M++R            NKT   D AI LDL+AKV+GI+AAE
Sbjct: 62   LKKLRDRKLYYPALKLSENMEKR----------GMNKTVS-DQAIHLDLVAKVQGIDAAE 110

Query: 1038 DFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYL 859
            ++F +LP   +N +TY +LL+CYC             K+ K+L    + +P+ ++M+LY 
Sbjct: 111  NYFVDLPETSKNHLTYGSLLNCYCKELMTEKAEALLEKM-KELNLGFSSMPFNSLMTLYA 169

Query: 858  SLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHW 679
                PEK+ +++  MK   +  +   YN+WM A AAV+D    + ++E   +       W
Sbjct: 170  KTGHPEKIPAIIQEMKASSIMPDSYTYNVWMRALAAVNDISGAERVIEEMKRDGRVAADW 229

Query: 678  TTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQS 499
            TT+SNL +IY++ G  EKA    + LEN  +     AY  LI  YG   +   ++R+W+S
Sbjct: 230  TTFSNLASIYVEAGLFEKAERALKELENRNAHRDLSAYQFLITLYGQTGNLSEVYRIWRS 289

Query: 498  LKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXXX 319
            L+         +Y +M + L+ LKD+ GA+  F EW S     D  ++   + +Y     
Sbjct: 290  LRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFKEWESGCATYDIRVTNVMIGAYAKESR 349

Query: 318  XXXXXXXXAKF--TDCEMDSRKWEVVAEIFLR-------YNCIDKALEMITHGFAELKWV 166
                     +        +++ WE+ ++ +LR        +C++KA++    G  +    
Sbjct: 350  LENAEELKERARRRGANPNAKTWEIFSDYYLRNGDMKLAVDCLEKAIDT---GRGD---- 402

Query: 165  YASPWAPKADNVLSILNYYKEKADVDAAEKVLKLL 61
                W P ++ + + + +++++ DVD AE  L++L
Sbjct: 403  -GGKWVPSSETIRTFMRHFEQEKDVDGAEGFLEIL 436


>dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 505

 Score =  187 bits (474), Expect = 1e-44
 Identities = 116/409 (28%), Positives = 204/409 (49%), Gaps = 2/409 (0%)
 Frame = -1

Query: 1221 IIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAA 1042
            I   LR   R+  +L+V +WM +R         RD       D AI LDLIAKVRG+   
Sbjct: 105  IARELRKFRRFNLALEVYDWMTDR---------RDRFSLSSSDMAIQLDLIAKVRGVPDT 155

Query: 1041 EDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLY 862
            E++FE+LP   ++  TY +LL+ Y              ++ KK GF  + LP+  +M+ Y
Sbjct: 156  EEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKK-GFATDTLPFNVLMNFY 214

Query: 861  LSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLH 682
            + + +PEKV ++ D MK   +  +   YN+W+  CAA+ D D+++ ++   T   +   +
Sbjct: 215  VDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVLNQMTADESVVAN 274

Query: 681  WTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQ 502
            WTTY+ L ++++K    EKA    +  E   +   ++ ++ LI  Y  L  ++ ++R+W 
Sbjct: 275  WTTYTTLASMHIKLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSHLQKKEEVYRIWN 334

Query: 501  SLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXX 322
              K     ++   Y+ +  AL+ L DI+GA+ +++EW S   + D +     L  Y    
Sbjct: 335  WYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREG 394

Query: 321  XXXXXXXXXAKFTDCEMDSR--KWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWA 148
                      +F +   + +   WE++A  +L+ N + +AL  +    A      AS W 
Sbjct: 395  FVVKAQQTLNRFVEKGGNPKPNTWEILATAYLKDNQLSEALSCLEKATAVKS---ASKWR 451

Query: 147  PKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYHKCASIDAY 1
            P+  NV ++L Y+KEK D ++ ++++ +L    CA  + Y   + ID Y
Sbjct: 452  PRPTNVETLLAYFKEKNDTESVDRLMSVLRSRGCAENEEYK--SLIDTY 498


>ref|XP_004509657.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            isoform X1 [Cicer arietinum]
          Length = 490

 Score =  186 bits (473), Expect = 2e-44
 Identities = 116/388 (29%), Positives = 200/388 (51%), Gaps = 2/388 (0%)
 Frame = -1

Query: 1218 IEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAE 1039
            ++ LR    Y+ +LK+SE M +R          +  KT   D AI +DLIAK +GI AAE
Sbjct: 62   LKKLRQRKLYQPALKLSETMAKR----------NMIKTVS-DQAIHIDLIAKAKGIVAAE 110

Query: 1038 DFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYL 859
            ++F  LP   +N + Y ALL+CYC             K+ K LG   + +PY ++M+LY 
Sbjct: 111  NYFVNLPESAKNHLCYGALLNCYCKELMTDKAEGVVEKM-KDLGLPLSSMPYNSLMTLYT 169

Query: 858  SLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHW 679
             + +PEK+ S++  MK   + ++   YN+WM A AAV+D   ++ +++   +       W
Sbjct: 170  KVGQPEKIPSMIQEMKASNIMLDSYTYNVWMRALAAVNDISGVERVIDEMKRDGRVIGDW 229

Query: 678  TTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQS 499
            TTYSNL +IY+  G  EKA    + LE   +     AY  +I  YG +N    ++RVW+S
Sbjct: 230  TTYSNLASIYVDAGLFEKAEGALKELEKRNAYKNLSAYQFVITLYGRINKIYEVYRVWRS 289

Query: 498  LKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSY--IXX 325
            L+         +Y +M + L+ LKD+ GA+  F EW ST    D  ++ + +++Y  +  
Sbjct: 290  LRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREWESTCNTYDIRVANALIEAYAKLDM 349

Query: 324  XXXXXXXXXXAKFTDCEMDSRKWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWAP 145
                      A+    + +++ WE+  +  LR      A++ +T   + +       W P
Sbjct: 350  LEKAEELKERARRRGAKPNAKTWEIFLDCHLRKGDFKLAVDCLTEAIS-IGRGNGEKWVP 408

Query: 144  KADNVLSILNYYKEKADVDAAEKVLKLL 61
             ++ +  ++ +Y+++ DVD AE+ +++L
Sbjct: 409  SSETIGIMMRHYEQEKDVDGAEEFIEIL 436


>ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150-like
            [Brachypodium distachyon]
          Length = 513

 Score =  186 bits (473), Expect = 2e-44
 Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 2/396 (0%)
 Frame = -1

Query: 1209 LRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAEDFF 1030
            LR   R+  +L+V +WM ER         RD       D AI LDL+AKVRG+  AE++F
Sbjct: 119  LRKFRRFNLALQVYDWMTER---------RDRFSLSSSDMAIQLDLVAKVRGVPHAEEYF 169

Query: 1029 EELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYLSLN 850
            E LP   ++  TY +LL+ Y              ++ KK G+  + LP+  +M+ Y+ + 
Sbjct: 170  ESLPDPLKDKRTYGSLLNVYAQARMKEKTEDTFEQMRKK-GYASDTLPFNVLMNFYVDVE 228

Query: 849  KPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHWTTY 670
            +P+KV ++ D MK   V  +   YN+W+ + AA+ D D +D +        +   +WTTY
Sbjct: 229  EPQKVSAVTDEMKERNVSFDVCTYNIWIKSFAAMKDADGMDRVFNQMIADESVVANWTTY 288

Query: 669  SNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQSLKE 490
            + L ++++K G  EKA    +  E   +   ++ ++ LI  Y  L  ++ ++R+W   K 
Sbjct: 289  TTLASMHIKLGNFEKAEVCLKEAEKRTTGRDKKCFHFLITLYSYLQKKEEVYRIWNWYKA 348

Query: 489  KCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXXXXXX 310
                ++   Y+ +  AL+ L DI+GA+ +++EW S   + D +     L  Y        
Sbjct: 349  TFSTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYSREGFVVK 408

Query: 309  XXXXXAKFTDCEMDSR--KWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWAPKAD 136
                  +F +   + +   WE++A  +L+ N + +AL  +    A      AS W P+  
Sbjct: 409  AEQTLNRFVEKGGNPKPNTWEILASAYLKDNQLSEALSCMEKAAAVKS---ASRWRPRPS 465

Query: 135  NVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAY 28
            NV S+L Y+KE  D D+A++++ +L+   CA  + Y
Sbjct: 466  NVESLLAYFKENNDTDSADRLMGVLTSRGCAENEEY 501


>ref|XP_004296672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Fragaria vesca subsp. vesca]
          Length = 490

 Score =  186 bits (472), Expect = 3e-44
 Identities = 122/416 (29%), Positives = 202/416 (48%), Gaps = 2/416 (0%)
 Frame = -1

Query: 1302 ISAENTLDFLKKAEDNMMYLHPGDMRAIIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQ 1123
            +S    L+   K+   +     GD    ++ LR    Y  +LK+SE M +R         
Sbjct: 37   VSVRQKLNEFIKSRKRVFKWEVGDT---LKKLRQRKLYYPALKLSETMAKR--------- 84

Query: 1122 RDFNKTKGGDSAILLDLIAKVRGIEAAEDFFEELPSEKRNFMTYSALLHCYCXXXXXXXX 943
               NKT   D AI LDL+AK RGI AAED+F+ LP   +N ++Y ALL+CYC        
Sbjct: 85   -GMNKTVS-DQAIHLDLVAKARGIPAAEDYFKNLPESSKNHLSYGALLNCYCKELMTEEA 142

Query: 942  XXXXXKIHKKLGFRKNRLPYVNMMSLYLSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMS 763
                 K+ K+L      +PY ++M+LY    KPEK+ +++  MK   V ++  +YN+WM 
Sbjct: 143  EALLEKM-KELNLPLTSMPYNSLMTLYSKTGKPEKIPAIIQEMKGCNVMLDSYSYNVWMR 201

Query: 762  ACAAVSDFDSIDEIVETATKKYNGKLHWTTYSNLINIYLKGGFPEKAYSYAEGLENDISD 583
            A AAV D   ++ +++   +       WTTYSNL +IY+  G PEKA +    LE   + 
Sbjct: 202  ALAAVDDVSGVERVIDEMKRDGRVASDWTTYSNLASIYVDAGMPEKAENALRELEKKNTH 261

Query: 582  APREAYNRLIKYYGLLNDEKSLFRVWQSLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNI 403
                A+  LI  YG   +   + RVW+SL+         +Y +M + L+ L+D+ GA+  
Sbjct: 262  RDLSAFQFLITLYGRTGNLLEVHRVWRSLRLAFPKTANISYLNMIQVLVNLRDLPGAEKC 321

Query: 402  FDEWMSTEMAKDYELSCSFLKSYI--XXXXXXXXXXXXAKFTDCEMDSRKWEVVAEIFLR 229
            F EW S     D  ++   + +Y               A+    +  ++ WE+  + +L+
Sbjct: 322  FREWESRCSTYDIRVANVLIGAYAKEGMLEKAKVLKEQARRRGAKPSAKTWEIFVDCYLK 381

Query: 228  YNCIDKALEMITHGFAELKWVYASPWAPKADNVLSILNYYKEKADVDAAEKVLKLL 61
                D A+E + +  +  K      W P  + + +++ ++++  DV+ AE  L++L
Sbjct: 382  NAEYDLAVESVANAISIGKG-DGGKWVPSHETIKTLMEHFEQTKDVEGAEGFLEIL 436


>ref|NP_001168310.1| hypothetical protein [Zea mays] gi|223947377|gb|ACN27772.1| unknown
            [Zea mays] gi|414586053|tpg|DAA36624.1| TPA: hypothetical
            protein ZEAMMB73_688721 [Zea mays]
          Length = 513

 Score =  185 bits (470), Expect = 4e-44
 Identities = 116/409 (28%), Positives = 203/409 (49%), Gaps = 2/409 (0%)
 Frame = -1

Query: 1221 IIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAA 1042
            I + LR   R+  +L+V +WM ER         RD       D AI LDLIAKVRG+  A
Sbjct: 115  IAKELRKFRRFNLALQVYDWMTER---------RDRFPLSSSDMAIQLDLIAKVRGVPHA 165

Query: 1041 EDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLY 862
            E +F+ELP   ++  TY +LL+ Y              ++ KK GF  + LP   +M+ Y
Sbjct: 166  EKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEETFEQMRKK-GFASDTLPCNVLMNFY 224

Query: 861  LSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLH 682
            +   +P++VL+++D MK   V  +   YN+W+ +CAA  D + ++++        +   +
Sbjct: 225  VDSGEPDEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMEQVFSQMIADESVVAN 284

Query: 681  WTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQ 502
            WTTY+ L ++YLK G  EKA    +  E   +   ++ ++ L+  Y  L  ++ ++R+W 
Sbjct: 285  WTTYTTLASMYLKLGNSEKAEECLKDAEKRTTGREKKCFHYLMTLYSHLGKKEEVYRIWN 344

Query: 501  SLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSYIXXX 322
              K     ++   Y+ +  AL+ + DI+GA+ +++EW S   + D +     L  Y    
Sbjct: 345  WYKATFPMIHNLGYQELLSALIRIGDIEGAELLYEEWASKSYSFDPKTMNILLAWYAKEG 404

Query: 321  XXXXXXXXXAKFTDCEMDSR--KWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWA 148
                      +F +   + +   WE++A  ++  + I +AL  +    A      AS W 
Sbjct: 405  LITKAEQTVNRFVEKGGNPKPNTWEILATAYMNDDKISEALSCMEKATAVKS---ASKWK 461

Query: 147  PKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYHKCASIDAY 1
            P+  NV ++L  +KEK D + A++++ +L+   CA  + Y   + ID Y
Sbjct: 462  PRPTNVETLLASFKEKNDAEGADRLVSVLTSRGCAEDEEYK--SLIDTY 508


>ref|XP_004508130.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like
            [Cicer arietinum]
          Length = 490

 Score =  185 bits (469), Expect = 6e-44
 Identities = 115/388 (29%), Positives = 198/388 (51%), Gaps = 2/388 (0%)
 Frame = -1

Query: 1218 IEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRGIEAAE 1039
            ++ LR    Y+ +LK+SE M +R          +  KT   D AI +DLIAK +GI AAE
Sbjct: 62   LKKLRQRKLYQPALKLSETMAKR----------NMIKTVS-DQAIHIDLIAKAKGIVAAE 110

Query: 1038 DFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNMMSLYL 859
            ++F  LP   +N ++Y ALL+CYC             K+ K LG     +PY ++M+LY 
Sbjct: 111  NYFVNLPDSAKNHLSYGALLNCYCKELMTDKAEGVVEKM-KDLGLPLTSMPYNSLMTLYT 169

Query: 858  SLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKYNGKLHW 679
             + +PEK+ S++  MK   +  +   YN+WM A AAV+D   ++ +++   +       W
Sbjct: 170  KVGQPEKIPSMIQEMKASNIMPDSYTYNVWMRALAAVNDISGVERVIDEMKRDGRVTGDW 229

Query: 678  TTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSLFRVWQS 499
            TTYSNL +IY+  G  EKA    + LE   +     AY  +I  YG +     ++RVW+S
Sbjct: 230  TTYSNLASIYVDAGLFEKAEGALKELEKRNAYKNLSAYQFIITLYGRIGKTYEVYRVWRS 289

Query: 498  LKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKSY--IXX 325
            L+         +Y +M + L+ LKD+ GA+  F EW ST    D  ++ + + +Y  +  
Sbjct: 290  LRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREWESTCTTYDIRVANALIGAYTKLDM 349

Query: 324  XXXXXXXXXXAKFTDCEMDSRKWEVVAEIFLRYNCIDKALEMITHGFAELKWVYASPWAP 145
                      A+    + +++ WE+  +  LR   +  A++ +T   + +       W P
Sbjct: 350  LEKAEELKERARRRGAKPNAKTWEIFLDCHLRKGDLKLAVDCLTEAIS-IGRGNGEKWVP 408

Query: 144  KADNVLSILNYYKEKADVDAAEKVLKLL 61
             ++ +  ++ +Y+++ DVD AE+ +++L
Sbjct: 409  SSETIGIMMRHYEQEKDVDGAEEFIEIL 436


>ref|XP_004290659.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 520

 Score =  184 bits (467), Expect = 1e-43
 Identities = 128/409 (31%), Positives = 204/409 (49%), Gaps = 6/409 (1%)
 Frame = -1

Query: 1233 DMRAIIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRG 1054
            ++  I+  LR + RY+ +L++ EWM          +Q+D  K   GD A+ LDLIAKVRG
Sbjct: 73   ELNRIVRELRKLRRYKHALEICEWMT---------LQKDI-KLLAGDYAVELDLIAKVRG 122

Query: 1053 IEAAEDFFEELPSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVNM 874
            + +AE FFE+LP + R+ +T SALLH Y              K+ K+ G+ KN LPY +M
Sbjct: 123  MNSAEKFFEDLPEQMRDGITCSALLHTYVQNKESAKAEALFEKM-KECGYVKNPLPYNHM 181

Query: 873  MSLYLSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEI-VETATKKY 697
            +SLY+S  K +KV  ++  MKV     + + YNLW++ CA+ +D +S + + +E   +K 
Sbjct: 182  LSLYVSDGKFDKVRDVIGEMKVHS-QPDVVTYNLWLTVCASQNDVESAERVFLELKKRKV 240

Query: 696  NGKLHWTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSL 517
            N    W T+S L N+Y+K    EKA +  + +E   S   R AY+ LI  +  + D+  +
Sbjct: 241  NPD--WVTFSTLTNLYIKSSQIEKAAATLKEMEKMASQKNRIAYSSLISLHANIGDKAGV 298

Query: 516  FRVWQSLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKS 337
             RVW+ LK     +N + Y  M  +L+ LK I+ A+ ++ EW S     D  +S   L +
Sbjct: 299  QRVWKKLKSYFPKMNDAEYTCMIASLVKLKQIEEAEKLYTEWESVSGTHDPRVSNIILAA 358

Query: 336  YIXXXXXXXXXXXXAKF-----TDCEMDSRKWEVVAEIFLRYNCIDKALEMITHGFAELK 172
            YI            ++      T C      WE++   FL+     KALE        +K
Sbjct: 359  YINRDQMDVAETFCSRMVQNGVTPC---YSTWELLTWGFLKQEHTKKALEYFKKAVGSVK 415

Query: 171  WVYASPWAPKADNVLSILNYYKEKADVDAAEKVLKLLSDHKCASIDAYH 25
                  W P    +  +     E+ +V+ AE+++  L +    S + Y+
Sbjct: 416  -----KWDPHQRLIAEVFGRLNEEGNVEEAEELVVFLRNAGHVSAETYN 459


>ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g02370, mitochondrial; Flags: Precursor
            gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein
            [Arabidopsis thaliana] gi|332189300|gb|AEE27421.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 537

 Score =  184 bits (466), Expect = 1e-43
 Identities = 126/405 (31%), Positives = 198/405 (48%), Gaps = 10/405 (2%)
 Frame = -1

Query: 1233 DMRAIIEGLRGMSRYEKSLKVSEWMQERIATNPDWIQRDFNKTKGGDSAILLDLIAKVRG 1054
            D+    + LR   R + + ++ +WM++R  T               D AI LDLI K +G
Sbjct: 105  DLFRCAKTLRKFRRPQHAFEIFDWMEKRKMT-----------FSVSDHAICLDLIGKTKG 153

Query: 1053 IEAAEDFFEEL-PSEKRNFMTYSALLHCYCXXXXXXXXXXXXXKIHKKLGFRKNRLPYVN 877
            +EAAE++F  L PS K +  TY AL++CYC              I  +L F  N LP+ N
Sbjct: 154  LEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFE-IMDELNFVNNSLPFNN 212

Query: 876  MMSLYLSLNKPEKVLSLVDVMKVVGVDMNPIAYNLWMSACAAVSDFDSIDEIVETATKKY 697
            MMS+Y+ L++PEKV  LVD MK  G+    + Y++WM +C +++D D +++I++   K  
Sbjct: 213  MMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDS 272

Query: 696  NGKLHWTTYSNLINIYLKGGFPEKAYSYAEGLENDISDAPREAYNRLIKYYGLLNDEKSL 517
              K  W T+SNL  IY K G  EKA S  + +E  ++   R++++ L+  Y  ++    +
Sbjct: 273  EAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEV 332

Query: 516  FRVWQSLKEKCYHLNYSNYKSMHRALLVLKDIKGAQNIFDEWMSTEMAKDYELSCSFLKS 337
            +RVW+SLK+    +N  +Y  M +A+  L D+ G + IF EW S   A D  L+   + +
Sbjct: 333  YRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINT 392

Query: 336  YIXXXXXXXXXXXXAKFTDCEMDSRKWEV-VAEIFLRYNCID--------KALEMITHGF 184
            Y+             K  D  M   K     A   L  + ++        K LE      
Sbjct: 393  YL----KGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDS 448

Query: 183  AELKWVYASPWAPKADNVLSILNYYKEKADVDAAEKVLKLLSDHK 49
            AE K      W   ++ V     ++++  DVD AE   K+LS+ K
Sbjct: 449  AENK----DEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWK 489