BLASTX nr result

ID: Ephedra25_contig00006820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006820
         (810 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850422.1| hypothetical protein AMTR_s00165p00040130 [A...    58   3e-06
ref|XP_002535202.1| conserved hypothetical protein [Ricinus comm...    57   8e-06

>ref|XP_006850422.1| hypothetical protein AMTR_s00165p00040130 [Amborella trichopoda]
           gi|548854067|gb|ERN12003.1| hypothetical protein
           AMTR_s00165p00040130 [Amborella trichopoda]
          Length = 419

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
 Frame = +2

Query: 491 LHQNAQQHPPQSPSSYIPPGWQAAVNPTQE-----RSVSNYDDKNYPPLIAAQGAGMGTQ 655
           L Q  QQH  +  S +     QA    TQ+     RS S        PL  +  A +  Q
Sbjct: 240 LQQLKQQHAMKQQSDFTVWARQAKAQQTQQLQGRVRSCSFGARSGGKPLGFSSPAWIPPQ 299

Query: 656 KNVSEANV---------SGRECGGTGFFLPRRSAKGNDSRRRKTKPACSTVFLPYRVIQA 808
           + ++ + +         S RE GGTG FLPRR+   N+ R+   KPACSTV LP RV+QA
Sbjct: 300 QQIAGSGMRAVFLNGTGSRRESGGTGVFLPRRAGSPNEMRK---KPACSTVLLPARVVQA 356


>ref|XP_002535202.1| conserved hypothetical protein [Ricinus communis]
           gi|223523749|gb|EEF27181.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 49/153 (32%), Positives = 59/153 (38%), Gaps = 13/153 (8%)
 Frame = +2

Query: 389 KLKASEINWKHQNNKTQNSFTNSWEPWSAPGFWNLHQNAQQHPPQ----------SPSSY 538
           KL+AS+     Q    +    N W   + P    L+Q  QQ  P            P   
Sbjct: 127 KLQASQFQQLRQQQMMKQQRNNVWA--AGPQTKGLYQQQQQKQPVVHDSRGRNHGKPLGL 184

Query: 539 IPPGWQAAVNPTQERSVSNYDDKNYPPLIAAQGAGMGT--QKNVSEANVSG-RECGGTGF 709
            P  W                    PPL  AQ    G    + V   N    REC GTG 
Sbjct: 185 CPSAW--------------------PPLQQAQQQDQGNFGMRAVFLGNTGAKRECAGTGV 224

Query: 710 FLPRRSAKGNDSRRRKTKPACSTVFLPYRVIQA 808
           FLPRR     ++R+   KPACSTV LP RV+QA
Sbjct: 225 FLPRRVGAPTETRK---KPACSTVLLPARVVQA 254