BLASTX nr result
ID: Ephedra25_contig00006759
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00006759
(1723 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_001702067.1| putative uncharacterized protein [Escherichi... 217 1e-53
gb|AAX64155.1| hypothetical protein SCH_0249 [Salmonella enteric... 215 4e-53
ref|WP_002430992.1| hypothetical protein [Escherichia sp. 3_2_53... 212 5e-52
ref|WP_002464241.1| hypothetical protein [Shimwellia blattae] gi... 207 1e-50
gb|AAX66567.1| hypothetical protein SCH_2661 [Salmonella enteric... 206 2e-50
ref|WP_006686104.1| hypothetical protein [Citrobacter youngae] g... 124 4e-49
ref|WP_008808021.1| hypothetical protein [Klebsiella sp. 1_1_55]... 194 8e-47
ref|YP_008937858.1| protein of unknown function [Magnetospirillu... 172 4e-40
ref|WP_002001366.1| hypothetical protein [Vibrio cholerae] gi|39... 111 7e-33
ref|WP_001947521.1| hypothetical protein [Vibrio cholerae] gi|35... 111 7e-33
ref|WP_002001399.1| hypothetical protein [Vibrio cholerae] gi|39... 111 7e-33
ref|YP_001949470.1| hypothetical protein BMULJ_05092 [Burkholder... 86 7e-33
ref|WP_004976427.1| hypothetical protein, partial [Acinetobacter... 120 6e-31
ref|WP_002430991.1| conserved hypothetical protein [Escherichia ... 141 8e-31
ref|WP_021723518.1| Putative Uncharacterized protein [Avibacteri... 106 6e-30
ref|WP_021723633.1| Putative Uncharacterized protein [Avibacteri... 106 6e-30
ref|WP_001486394.1| dehydration responsive domain protein, parti... 137 1e-29
ref|WP_001403991.1| IS1 transposase InsAB, partial [Escherichia ... 137 1e-29
gb|ADI17229.1| hypothetical protein [uncultured alpha proteobact... 89 9e-29
dbj|BAN86004.1| 23S ribosomal RNA [Acinetobacter baumannii NCGM ... 127 2e-26
>ref|WP_001702067.1| putative uncharacterized protein [Escherichia coli]
gi|412971812|emb|CCJ46478.1| putative uncharacterized
protein [Escherichia coli]
Length = 101
Score = 217 bits (552), Expect = 1e-53
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 60
Query: 1563 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 1679
IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN
Sbjct: 61 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 99
>gb|AAX64155.1| hypothetical protein SCH_0249 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
Length = 133
Score = 215 bits (548), Expect = 4e-53
Identities = 98/102 (96%), Positives = 98/102 (96%)
Frame = +3
Query: 1374 SHCLYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH 1553
SHCLYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH
Sbjct: 30 SHCLYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH 89
Query: 1554 SMCIFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 1679
S C FVYGAVTLYRAPFQTLPLTH LIQALG SPFARRYWGN
Sbjct: 90 STCAFVYGAVTLYRAPFQTLPLTHMLIQALGSSPFARRYWGN 131
>ref|WP_002430992.1| hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|91070847|gb|ABE05728.1| hypothetical protein
UTI89_C0222 [Escherichia coli UTI89]
gi|91073497|gb|ABE08378.1| hypothetical protein
UTI89_C2920 [Escherichia coli UTI89]
gi|91074278|gb|ABE09159.1| hypothetical protein
UTI89_C3719 [Escherichia coli UTI89]
gi|91074359|gb|ABE09240.1| hypothetical protein
UTI89_C3809 [Escherichia coli UTI89]
gi|91074858|gb|ABE09739.1| hypothetical protein
UTI89_C4315 [Escherichia coli UTI89]
gi|91074973|gb|ABE09854.1| hypothetical protein
UTI89_C4441 [Escherichia coli UTI89]
gi|91075095|gb|ABE09976.1| hypothetical protein
UTI89_C4567 [Escherichia coli UTI89]
gi|226903375|gb|EEH89634.1| hypothetical protein
ESAG_07159 [Escherichia sp. 3_2_53FAA]
Length = 101
Score = 212 bits (539), Expect = 5e-52
Identities = 96/99 (96%), Positives = 98/99 (98%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAH+MC
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHNMC 60
Query: 1563 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 1679
IFVYGAVTLYRAPFQTLPLTHTLIQALG SPFARRYWGN
Sbjct: 61 IFVYGAVTLYRAPFQTLPLTHTLIQALGSSPFARRYWGN 99
>ref|WP_002464241.1| hypothetical protein [Shimwellia blattae]
gi|403193083|dbj|GAB83214.1| hypothetical protein
EB105725_51_00005 [Shimwellia blattae DSM 4481 = NBRC
105725]
Length = 101
Score = 207 bits (526), Expect = 1e-50
Identities = 92/99 (92%), Positives = 95/99 (95%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPH+QTGYHVSRPTHR H+MC
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHLQTGYHVSRPTHRVHNMC 60
Query: 1563 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 1679
IFVYGA TLYRA FQTLPLTHTLIQ LGCSPFARRYWGN
Sbjct: 61 IFVYGAFTLYRATFQTLPLTHTLIQTLGCSPFARRYWGN 99
>gb|AAX66567.1| hypothetical protein SCH_2661 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62129535|gb|AAX67238.1| hypothetical protein SCH_3332
[Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67] gi|62130006|gb|AAX67709.1| hypothetical
protein SCH_3803 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130088|gb|AAX67791.1| hypothetical protein SCH_3885
[Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67] gi|62130226|gb|AAX67929.1| hypothetical
protein SCH_4023 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130261|gb|AAX67964.1| hypothetical protein SCH_4058
[Salmonella enterica subsp. enterica serovar Choleraesuis
str. SC-B67]
Length = 101
Score = 206 bits (525), Expect = 2e-50
Identities = 94/99 (94%), Positives = 95/99 (95%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHS C
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSTC 60
Query: 1563 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 1679
FVYGAVTLYRAPFQTLPLTH LIQALG SPFARRYWGN
Sbjct: 61 AFVYGAVTLYRAPFQTLPLTHMLIQALGSSPFARRYWGN 99
>ref|WP_006686104.1| hypothetical protein [Citrobacter youngae]
gi|291069666|gb|EFE07775.1| hypothetical protein
CIT292_08808 [Citrobacter youngae ATCC 29220]
Length = 109
Score = 124 bits (311), Expect(2) = 4e-49
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHS 1556
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPT RAH+
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTLRAHN 58
Score = 99.8 bits (247), Expect(2) = 4e-49
Identities = 47/58 (81%), Positives = 48/58 (82%)
Frame = +2
Query: 1535 PYSSSSQHVHFCVRGCHPVSRAFPDASTNTHTDSGSGLLPVRSPLLGESRLISFPRGT 1708
P + HVHFCVRG HPV AFPD STNTH DSGSGLLPVRSPLLGESRLISFPRGT
Sbjct: 52 PTLRAHNHVHFCVRGYHPVPSAFPDRSTNTHADSGSGLLPVRSPLLGESRLISFPRGT 109
>ref|WP_008808021.1| hypothetical protein [Klebsiella sp. 1_1_55]
gi|289774285|gb|EFD82300.1| hypothetical protein
HMPREF0485_05014 [Klebsiella sp. 1_1_55]
gi|499527998|emb|CCI74357.1| unnamed protein product
[Klebsiella pneumoniae]
Length = 101
Score = 194 bits (494), Expect = 8e-47
Identities = 86/99 (86%), Positives = 91/99 (91%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+YVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPT R H++C
Sbjct: 1 MYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTLRVHNLC 60
Query: 1563 IFVYGAVTLYRAPFQTLPLTHTLIQALGCSPFARRYWGN 1679
I VYG +TLYR FQT+PLTH LIQ LGCSPFARRYWGN
Sbjct: 61 ILVYGTITLYRRTFQTVPLTHKLIQTLGCSPFARRYWGN 99
>ref|YP_008937858.1| protein of unknown function [Magnetospirillum gryphiswaldense MSR-1
v2] gi|568205844|ref|WP_024080208.1| hypothetical protein
[Magnetospirillum gryphiswaldense]
gi|78033430|emb|CAJ30045.1| conserved hypothetical
protein [Magnetospirillum gryphiswaldense MSR-1]
gi|566555979|emb|CDK99198.1| protein of unknown function
[Magnetospirillum gryphiswaldense MSR-1 v2]
Length = 259
Score = 172 bits (436), Expect = 4e-40
Identities = 101/200 (50%), Positives = 114/200 (57%)
Frame = +1
Query: 1123 LAFHPQPQVIR*FFNISRFGPPVSVTQPSTCPWLDHRVSGLYPAT*RPVKTRFPFGSPIR 1302
+AFHP PQ+I FFN FGPPV VT PSTCPW+DH VSGL AT RP++TRF R
Sbjct: 1 MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSGLMHATRRPIQTRFRCAYTYR 60
Query: 1303 LTLLQNISR*PIIQKVRSHTPKRAPTACTYTVXXXXXXXXXXXXXXXXXXXXXLSVSQEY 1482
L L + K KRAPTAC ++V LSV++EY
Sbjct: 61 LKLAAYTNSLTHYTKGTPSPFKRAPTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEY 120
Query: 1483 LALEDGPPIFRQDTTCPALLIELTACAFLCTGLSPCIARLSXXXXXXXXXXXLWAAPRSL 1662
L LEDGPP+FRQD TCPALL T F TGLSP +ARLS W PRSL
Sbjct: 121 LGLEDGPPMFRQDFTCPALLKADT--RFTPTGLSPAMARLSRRFRLCKYQH--WPGPRSL 176
Query: 1663 AATGGISVDFFSSGYLDVSV 1722
A T G+SVD SSGYLDVSV
Sbjct: 177 ATTNGVSVDVLSSGYLDVSV 196
>ref|WP_002001366.1| hypothetical protein [Vibrio cholerae] gi|395938267|gb|EJH48961.1|
hypothetical protein VCCP104821_0001 [Vibrio cholerae
CP1048(21)]
Length = 182
Score = 111 bits (277), Expect(2) = 7e-33
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 1535
+YVHGFRF+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR
Sbjct: 1 MYVHGFRFYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 51
Score = 58.5 bits (140), Expect(2) = 7e-33
Identities = 36/61 (59%), Positives = 39/61 (63%)
Frame = +1
Query: 1540 LIELTACAFLCTGLSPCIARLSXXXXXXXXXXXLWAAPRSLAATGGISVDFFSSGYLDVS 1719
L++ T TGLSPCIA+LS L A P SLAAT GISVDFFSSGYLDVS
Sbjct: 52 LLDFTLDEASVTGLSPCIAKLSSLFTYFTEC--LRANPGSLAATTGISVDFFSSGYLDVS 109
Query: 1720 V 1722
V
Sbjct: 110 V 110
>ref|WP_001947521.1| hypothetical protein [Vibrio cholerae] gi|356451365|gb|EHI04052.1|
hypothetical protein VCHC61A1_3636 [Vibrio cholerae
HC-61A1]
Length = 169
Score = 111 bits (277), Expect(2) = 7e-33
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 1535
+YVHGFRF+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR
Sbjct: 1 MYVHGFRFYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 51
Score = 58.5 bits (140), Expect(2) = 7e-33
Identities = 36/61 (59%), Positives = 39/61 (63%)
Frame = +1
Query: 1540 LIELTACAFLCTGLSPCIARLSXXXXXXXXXXXLWAAPRSLAATGGISVDFFSSGYLDVS 1719
L++ T TGLSPCIA+LS L A P SLAAT GISVDFFSSGYLDVS
Sbjct: 52 LLDFTLDEASVTGLSPCIAKLSSLFTYFTEC--LRANPGSLAATTGISVDFFSSGYLDVS 109
Query: 1720 V 1722
V
Sbjct: 110 V 110
>ref|WP_002001399.1| hypothetical protein [Vibrio cholerae] gi|395938197|gb|EJH48895.1|
hypothetical protein VCCP104821_0250 [Vibrio cholerae
CP1048(21)]
Length = 168
Score = 111 bits (277), Expect(2) = 7e-33
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 1535
+YVHGFRF+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR
Sbjct: 1 MYVHGFRFYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSR 51
Score = 58.5 bits (140), Expect(2) = 7e-33
Identities = 36/61 (59%), Positives = 39/61 (63%)
Frame = +1
Query: 1540 LIELTACAFLCTGLSPCIARLSXXXXXXXXXXXLWAAPRSLAATGGISVDFFSSGYLDVS 1719
L++ T TGLSPCIA+LS L A P SLAAT GISVDFFSSGYLDVS
Sbjct: 52 LLDFTLDEASVTGLSPCIAKLSSLFTYFTEC--LRANPGSLAATTGISVDFFSSGYLDVS 109
Query: 1720 V 1722
V
Sbjct: 110 V 110
>ref|YP_001949470.1| hypothetical protein BMULJ_05092 [Burkholderia multivorans ATCC
17616] gi|501444602|ref|WP_012468051.1| hypothetical
protein [Burkholderia multivorans]
gi|189337865|dbj|BAG46934.1| hypothetical protein
BMULJ_05092 [Burkholderia multivorans ATCC 17616]
Length = 123
Score = 85.5 bits (210), Expect(2) = 7e-33
Identities = 45/69 (65%), Positives = 48/69 (69%)
Frame = +3
Query: 519 LTCFPSTTPFGLALGVDSPCPD*RWTGTLGLPASGLFTRFIVTYVSIRTSDTSSMPHSTP 698
+TCFPS T F LALG DSP D R G LGL A G FT FI T+VSIRTSDTSS + P
Sbjct: 1 MTCFPSATHFCLALGADSPYADERCVGNLGLTARGPFTPFIATHVSIRTSDTSSTLYKAP 60
Query: 699 SQAYRTLPY 725
SQAY TL Y
Sbjct: 61 SQAYGTLSY 69
Score = 84.3 bits (207), Expect(2) = 7e-33
Identities = 40/49 (81%), Positives = 42/49 (85%)
Frame = +1
Query: 745 AAAASVHGLAPLHLPRRPTRPVSYYAFFK*WLLLSQHPGCLGLPTSFPT 891
A+AASV+GLAPLHLPRR TR VSYYAFFK WLLLSQ P C LPTSFPT
Sbjct: 75 ASAASVYGLAPLHLPRRTTRSVSYYAFFKGWLLLSQPPDCFSLPTSFPT 123
>ref|WP_004976427.1| hypothetical protein, partial [Acinetobacter towneri]
gi|480030975|gb|ENV71128.1| hypothetical protein
F947_00014, partial [Acinetobacter towneri DSM 14962 =
CIP 107472]
Length = 164
Score = 120 bits (300), Expect(2) = 6e-31
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = +3
Query: 1407 FFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMCIFVYGAVT 1586
+FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQT +HV RPT R H +C FVYG +T
Sbjct: 1 YFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTRFHVPRPT-RHHCVCPFVYGNIT 59
Query: 1587 LYRAPFQTLPLTHTLIQAL 1643
LY Q++PL HT + L
Sbjct: 60 LYVRTSQSVPLEHTQLNGL 78
Score = 43.1 bits (100), Expect(2) = 6e-31
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 1640 SGLLPVRSPLLGESRLISFPRGT*MFQF 1723
+GL P RSPLL ES+LISFP+GT MF F
Sbjct: 76 NGLFPFRSPLLRESQLISFPKGTEMFHF 103
>ref|WP_002430991.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|226903374|gb|EEH89633.1| hypothetical protein
ESAG_07158 [Escherichia sp. 3_2_53FAA]
Length = 66
Score = 141 bits (356), Expect = 8e-31
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +2
Query: 1025 MTPLPKQCSTPGDEFTRRYLNSFRGEPAISRFDWPFTPSHKSSANFSTLVGSVLQLVLPN 1204
MTPLPKQCSTPGDEFTRRYLNSFRGEPAISRFDWPFTPSHKSSANFSTLVGSVLQLVLPN
Sbjct: 1 MTPLPKQCSTPGDEFTRRYLNSFRGEPAISRFDWPFTPSHKSSANFSTLVGSVLQLVLPN 60
Query: 1205 LQPAHG 1222
LQPAHG
Sbjct: 61 LQPAHG 66
>ref|WP_021723518.1| Putative Uncharacterized protein [Avibacterium paragallinarum]
gi|523674915|emb|CDF98165.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
gi|523674965|emb|CDF98117.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
gi|523675456|emb|CDF97691.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
Length = 200
Score = 106 bits (265), Expect(2) = 6e-30
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+YV GFRF+FTPL GVLFAFPS+YWFTIGQSGVFSLGGWSPH+QTG+ VSRPT R S
Sbjct: 1 MYVQGFRFYFTPLTGVLFAFPSQYWFTIGQSGVFSLGGWSPHLQTGFLVSRPTSRKLSTT 60
Query: 1563 IFV 1571
++
Sbjct: 61 AWI 63
Score = 53.1 bits (126), Expect(2) = 6e-30
Identities = 33/57 (57%), Positives = 34/57 (59%)
Frame = +1
Query: 1552 TACAFLCTGLSPCIARLSXXXXXXXXXXXLWAAPRSLAATGGISVDFFSSGYLDVSV 1722
T L TGLSPC+A L L A P SLAAT ISVDFFSSGYLDVSV
Sbjct: 59 TTAWILSTGLSPCVACLPRQFLYLCCYYLL-APPLSLAATHRISVDFFSSGYLDVSV 114
>ref|WP_021723633.1| Putative Uncharacterized protein [Avibacterium paragallinarum]
gi|523674243|emb|CDF98816.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
gi|523675038|emb|CDF97944.1| Putative Uncharacterized
protein [Avibacterium paragallinarum JF4211]
Length = 200
Score = 106 bits (265), Expect(2) = 6e-30
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+YV GFRF+FTPL GVLFAFPS+YWFTIGQSGVFSLGGWSPH+QTG+ VSRPT R S
Sbjct: 1 MYVQGFRFYFTPLTGVLFAFPSQYWFTIGQSGVFSLGGWSPHLQTGFLVSRPTSRKLSTT 60
Query: 1563 IFV 1571
++
Sbjct: 61 AWI 63
Score = 53.1 bits (126), Expect(2) = 6e-30
Identities = 33/57 (57%), Positives = 34/57 (59%)
Frame = +1
Query: 1552 TACAFLCTGLSPCIARLSXXXXXXXXXXXLWAAPRSLAATGGISVDFFSSGYLDVSV 1722
T L TGLSPC+A L L A P SLAAT ISVDFFSSGYLDVSV
Sbjct: 59 TTAWILSTGLSPCVACLPRQFLYLCCYYLL-APPLSLAATHRISVDFFSSGYLDVSV 114
>ref|WP_001486394.1| dehydration responsive domain protein, partial [Escherichia coli]
gi|408199720|gb|EKI24911.1| dehydration responsive
domain protein, partial [Escherichia coli TW15901]
Length = 67
Score = 137 bits (346), Expect = 1e-29
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +3
Query: 621 GLFTRFIVTYVSIRTSDTSSMPHSTPSQAYRTLPYPTTHKRRCRSFGAWFSPVTSSAQAD 800
GLFTRFIVTYVSIRTSDTSSMPHSTPSQAYRTLPYPTTH+RRCRSFGAWFSPVTSSAQAD
Sbjct: 1 GLFTRFIVTYVSIRTSDTSSMPHSTPSQAYRTLPYPTTHQRRCRSFGAWFSPVTSSAQAD 60
Query: 801 STSELLR 821
STSELLR
Sbjct: 61 STSELLR 67
>ref|WP_001403991.1| IS1 transposase InsAB, partial [Escherichia coli]
gi|472408368|gb|EMR91350.1| IS1 transposase InsAB,
partial [Escherichia coli ONT:H33 str. C48/93]
Length = 80
Score = 137 bits (346), Expect = 1e-29
Identities = 65/80 (81%), Positives = 65/80 (81%)
Frame = +2
Query: 86 HRIRPLSCLHSAVFLINSCXXXXXXXXXXXXXXXLHLHISVPSPEVTAPFCLVPSPEFSQ 265
HRIRPLSCLHSAVFLINSC LHLHISVPSPEVTAPFCLVPSPEFSQ
Sbjct: 1 HRIRPLSCLHSAVFLINSCSQLVSSTDFSSTSKSLHLHISVPSPEVTAPFCLVPSPEFSQ 60
Query: 266 APWYSLPDHLCRFGVRFDVT 325
APWYSLPDHLCRFGVRFDVT
Sbjct: 61 APWYSLPDHLCRFGVRFDVT 80
>gb|ADI17229.1| hypothetical protein [uncultured alpha proteobacterium
HF0070_14E07]
Length = 139
Score = 88.6 bits (218), Expect(2) = 9e-29
Identities = 42/77 (54%), Positives = 46/77 (59%)
Frame = +2
Query: 497 SNTKYRNINLFPIDYAFXXXXXXXXXXXXXXXDRNPWSSGERAFHPLYRYLCQHSHF*YL 676
+ T+ RNINL PIDY F RNPW+ GE H L RY CQHSHF YL
Sbjct: 8 TTTRLRNINLIPIDYGFRPRLRGRLTLGGLTLPRNPWAYGESVSHTLCRYSCQHSHFRYL 67
Query: 677 QHASQHTFAGLQNAPLP 727
QH SQ TF GL+NAPLP
Sbjct: 68 QHPSQDTFTGLRNAPLP 84
Score = 67.4 bits (163), Expect(2) = 9e-29
Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = +1
Query: 748 AAASVHGLAPLHLPRRP--TRPVSYYAFFK*WLLLSQHPGCLGLPTSFPT 891
++ASV+GL+P + +RPVSYYAFFK WLLLSQ PGCLGLPTSFPT
Sbjct: 90 SSASVYGLSPDTSSAQAGLSRPVSYYAFFKGWLLLSQPPGCLGLPTSFPT 139
>dbj|BAN86004.1| 23S ribosomal RNA [Acinetobacter baumannii NCGM 237]
gi|546201171|dbj|BAN86414.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546201203|dbj|BAN86446.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546203524|dbj|BAN88767.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546203935|dbj|BAN89178.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
gi|546204084|dbj|BAN89327.1| 23S ribosomal RNA
[Acinetobacter baumannii NCGM 237]
Length = 81
Score = 127 bits (318), Expect = 2e-26
Identities = 59/82 (71%), Positives = 66/82 (80%)
Frame = +3
Query: 1383 LYVHGFRFFFTPLAGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTGYHVSRPTHRAHSMC 1562
+Y GFR +FTPL GVLFAFPSRYWFTIGQSGVFSLGGWSPHIQT +HV RPT R H +C
Sbjct: 1 MYACGFRIYFTPLTGVLFAFPSRYWFTIGQSGVFSLGGWSPHIQTRFHVPRPT-RHHYVC 59
Query: 1563 IFVYGAVTLYRAPFQTLPLTHT 1628
FVYG +TLY Q++PL HT
Sbjct: 60 PFVYGNITLYVRTSQSVPLKHT 81