BLASTX nr result

ID: Ephedra25_contig00006682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006682
         (816 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829914.1| hypothetical protein AMTR_s00073p00116690 [A...    66   1e-08
ref|XP_006433950.1| hypothetical protein CICLE_v10001853mg [Citr...    64   5e-08
ref|XP_006433948.1| hypothetical protein CICLE_v10001853mg [Citr...    64   5e-08
gb|EOX92056.1| F-box with wd-40 2 isoform 1 [Theobroma cacao] gi...    64   5e-08
ref|XP_002301066.1| N7 family protein [Populus trichocarpa] gi|2...    64   6e-08
ref|XP_006433949.1| hypothetical protein CICLE_v10001853mg [Citr...    63   1e-07
ref|XP_006472577.1| PREDICTED: F-box protein FBW2-like isoform X...    62   2e-07
ref|XP_006286533.1| hypothetical protein CARUB_v10001489mg [Caps...    61   5e-07
gb|AGG68577.1| F-box protein [Cucumis sativus]                         60   7e-07
ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis ...    60   7e-07
ref|NP_567343.1| F-box with WD-40 2 [Arabidopsis thaliana] gi|30...    59   2e-06
ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vit...    59   2e-06
ref|XP_003581288.1| PREDICTED: F-box protein FBW2-like [Brachypo...    59   2e-06
ref|XP_002874499.1| F-box family protein [Arabidopsis lyrata sub...    59   3e-06
gb|EPS73446.1| hypothetical protein M569_01310, partial [Genlise...    58   4e-06
ref|XP_006397241.1| hypothetical protein EUTSA_v10028810mg [Eutr...    58   5e-06
gb|EOY15962.1| F-box with wd-40 2 isoform 3 [Theobroma cacao]          58   5e-06
gb|EOY15960.1| F-box with wd-40 2 isoform 1 [Theobroma cacao] gi...    58   5e-06
ref|XP_006366228.1| PREDICTED: F-box protein FBW2-like [Solanum ...    57   6e-06
gb|EMJ23836.1| hypothetical protein PRUPE_ppa008530mg [Prunus pe...    57   6e-06

>ref|XP_006829914.1| hypothetical protein AMTR_s00073p00116690 [Amborella trichopoda]
           gi|548835526|gb|ERM97330.1| hypothetical protein
           AMTR_s00073p00116690 [Amborella trichopoda]
          Length = 317

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 34/76 (44%), Positives = 51/76 (67%)
 Frame = -2

Query: 236 SVLSFTLMCSGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGK 57
           ++ +F +   G +L+ L++P+S+V+DA+  ++ASKL  LT LDI          LEAIG+
Sbjct: 99  AIFAFIVQHGGGSLRTLKLPVSEVSDAVVEEMASKLSSLTTLDISYCSKMGCKALEAIGR 158

Query: 56  HCKSLTHLSRNMHPQG 9
           +CKSL  LSRNM+P G
Sbjct: 159 NCKSLVGLSRNMNPIG 174


>ref|XP_006433950.1| hypothetical protein CICLE_v10001853mg [Citrus clementina]
           gi|567882791|ref|XP_006433954.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536072|gb|ESR47190.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536076|gb|ESR47194.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
          Length = 252

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = -2

Query: 239 HSVLSFTLMCSGQ-NLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAI 63
           H+ + F+L+     +LQ LR+P S+++D+I  Q+A +L  +T LD+          LEAI
Sbjct: 22  HNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAI 81

Query: 62  GKHCKSLTHLSRNMHPQGT 6
           GKHCK L  L RNMHP  T
Sbjct: 82  GKHCKLLVVLCRNMHPLDT 100


>ref|XP_006433948.1| hypothetical protein CICLE_v10001853mg [Citrus clementina]
           gi|567882785|ref|XP_006433951.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536070|gb|ESR47188.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536073|gb|ESR47191.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
          Length = 322

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = -2

Query: 239 HSVLSFTLMCSGQ-NLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAI 63
           H+ + F+L+     +LQ LR+P S+++D+I  Q+A +L  +T LD+          LEAI
Sbjct: 92  HNDMMFSLIAENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAI 151

Query: 62  GKHCKSLTHLSRNMHPQGT 6
           GKHCK L  L RNMHP  T
Sbjct: 152 GKHCKLLVVLCRNMHPLDT 170


>gb|EOX92056.1| F-box with wd-40 2 isoform 1 [Theobroma cacao]
           gi|508700161|gb|EOX92057.1| F-box with wd-40 2 isoform 1
           [Theobroma cacao] gi|508700162|gb|EOX92058.1| F-box with
           wd-40 2 isoform 1 [Theobroma cacao]
          Length = 319

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = -2

Query: 209 SGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLS 30
           + ++LQ LR+P S+++DA+  QVA KL  +T LD+          LEAIGKHCKSL  L 
Sbjct: 103 NAKSLQTLRLPRSEISDAVVEQVAGKLSSVTFLDVSYCRNIGAPALEAIGKHCKSLMGLR 162

Query: 29  RNMHP 15
           R MHP
Sbjct: 163 RTMHP 167


>ref|XP_002301066.1| N7 family protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
           N7 family protein [Populus trichocarpa]
          Length = 321

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
 Frame = -2

Query: 239 HSVLSFTLMCS-GQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAI 63
           H+  +F+ +     +LQ LRIP SD+ D+I  Q+A +L  +T LD+          LEAI
Sbjct: 92  HNDTNFSFLADHAGSLQTLRIPRSDIGDSIVEQIAGRLSTVTFLDVSYCNKISGRALEAI 151

Query: 62  GKHCKSLTHLSRNMHPQGT 6
           GKHCK L  L RNMHP  T
Sbjct: 152 GKHCKLLVGLCRNMHPLDT 170


>ref|XP_006433949.1| hypothetical protein CICLE_v10001853mg [Citrus clementina]
           gi|567882789|ref|XP_006433953.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536071|gb|ESR47189.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
           gi|557536075|gb|ESR47193.1| hypothetical protein
           CICLE_v10001853mg [Citrus clementina]
          Length = 240

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 42/68 (61%)
 Frame = -2

Query: 209 SGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLS 30
           S  +LQ LR+P S+++D+I  Q+A +L  +T LD+          LEAIGKHCK L  L 
Sbjct: 21  SAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC 80

Query: 29  RNMHPQGT 6
           RNMHP  T
Sbjct: 81  RNMHPLDT 88


>ref|XP_006472577.1| PREDICTED: F-box protein FBW2-like isoform X1 [Citrus sinensis]
           gi|568837120|ref|XP_006472578.1| PREDICTED: F-box
           protein FBW2-like isoform X2 [Citrus sinensis]
          Length = 322

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = -2

Query: 239 HSVLSFTLMCSGQ-NLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAI 63
           H+ + F+L+     +LQ LR+P S+++D+I  Q+A +L  +T LD+          LEAI
Sbjct: 92  HNDMMFSLIAENAGSLQTLRLPRSEMSDSIVDQIAGRLSAVTILDLSYCSKIGAPALEAI 151

Query: 62  GKHCKSLTHLSRNMHPQGT 6
           GKHCK L  L RNMHP  T
Sbjct: 152 GKHCKLLVVLCRNMHPLDT 170


>ref|XP_006286533.1| hypothetical protein CARUB_v10001489mg [Capsella rubella]
           gi|565453452|ref|XP_006286534.1| hypothetical protein
           CARUB_v10001489mg [Capsella rubella]
           gi|482555239|gb|EOA19431.1| hypothetical protein
           CARUB_v10001489mg [Capsella rubella]
           gi|482555240|gb|EOA19432.1| hypothetical protein
           CARUB_v10001489mg [Capsella rubella]
          Length = 317

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 32/74 (43%), Positives = 45/74 (60%)
 Frame = -2

Query: 236 SVLSFTLMCSGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGK 57
           S+ SF    +G +L+ L++P S +T++  V VA KL  LT+LD+          ++AIGK
Sbjct: 96  SIFSFIAQHAG-SLKTLKVPRSSLTNSGVVNVAEKLSSLTYLDLSYCCKVGAEAIQAIGK 154

Query: 56  HCKSLTHLSRNMHP 15
           HCKSL    RNMHP
Sbjct: 155 HCKSLREFCRNMHP 168


>gb|AGG68577.1| F-box protein [Cucumis sativus]
          Length = 318

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 30/78 (38%), Positives = 49/78 (62%)
 Frame = -2

Query: 239 HSVLSFTLMCSGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIG 60
           +S + F++     +LQ LR+P S+++DA+A Q+A +L  +T LD+          LE+IG
Sbjct: 93  NSSIFFSIADHAGSLQTLRLPRSNISDAVAEQIAGRLCAVTFLDLSYCDKISACGLESIG 152

Query: 59  KHCKSLTHLSRNMHPQGT 6
           K+CK+L  + RN+HP  T
Sbjct: 153 KNCKALVGMCRNLHPLHT 170


>ref|XP_004136279.1| PREDICTED: F-box protein FBW2-like [Cucumis sativus]
           gi|449524052|ref|XP_004169037.1| PREDICTED: F-box
           protein FBW2-like isoform 1 [Cucumis sativus]
           gi|449524054|ref|XP_004169038.1| PREDICTED: F-box
           protein FBW2-like isoform 2 [Cucumis sativus]
           gi|449524056|ref|XP_004169039.1| PREDICTED: F-box
           protein FBW2-like isoform 3 [Cucumis sativus]
          Length = 318

 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 30/78 (38%), Positives = 49/78 (62%)
 Frame = -2

Query: 239 HSVLSFTLMCSGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIG 60
           +S + F++     +LQ LR+P S+++DA+A Q+A +L  +T LD+          LE+IG
Sbjct: 93  NSSIFFSIADHAGSLQTLRLPRSNISDAVAEQIAGRLCAVTFLDLSYCDKISACGLESIG 152

Query: 59  KHCKSLTHLSRNMHPQGT 6
           K+CK+L  + RN+HP  T
Sbjct: 153 KNCKALVGMCRNLHPLHT 170


>ref|NP_567343.1| F-box with WD-40 2 [Arabidopsis thaliana]
           gi|30680931|ref|NP_849346.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|42572853|ref|NP_974523.1|
           F-box with WD-40 2 [Arabidopsis thaliana]
           gi|145332987|ref|NP_001078359.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|238480265|ref|NP_001154215.1|
           F-box with WD-40 2 [Arabidopsis thaliana]
           gi|75267749|sp|Q9ZPE4.1|FBW2_ARATH RecName: Full=F-box
           protein FBW2; AltName: Full=SKP1-interacting partner 18
           gi|4325371|gb|AAD17367.1| contains similarity to
           Medicago truncatula N7 protein (GB:Y17613) [Arabidopsis
           thaliana] gi|7267540|emb|CAB78022.1| putative protein
           [Arabidopsis thaliana] gi|21536818|gb|AAM61150.1| F-box
           protein family, AtFBW2 [Arabidopsis thaliana]
           gi|27311651|gb|AAO00791.1| F-box protein family, AtFBW2
           [Arabidopsis thaliana] gi|30984530|gb|AAP42728.1|
           At4g08980 [Arabidopsis thaliana]
           gi|222423880|dbj|BAH19904.1| AT4G08980 [Arabidopsis
           thaliana] gi|332657303|gb|AEE82703.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|332657304|gb|AEE82704.1| F-box
           with WD-40 2 [Arabidopsis thaliana]
           gi|332657305|gb|AEE82705.1| F-box with WD-40 2
           [Arabidopsis thaliana] gi|332657306|gb|AEE82706.1| F-box
           with WD-40 2 [Arabidopsis thaliana]
           gi|332657307|gb|AEE82707.1| F-box with WD-40 2
           [Arabidopsis thaliana]
          Length = 317

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 32/74 (43%), Positives = 44/74 (59%)
 Frame = -2

Query: 236 SVLSFTLMCSGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGK 57
           S+ SF    +G +L+ L++P S +T++  V VA KL  LT LD+          ++AIGK
Sbjct: 96  SIFSFIAQHAG-SLKTLKVPRSGLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGK 154

Query: 56  HCKSLTHLSRNMHP 15
           HCKSL    RNMHP
Sbjct: 155 HCKSLREFCRNMHP 168


>ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vitis vinifera]
           gi|359496684|ref|XP_003635300.1| PREDICTED: F-box
           protein FBW2 isoform 2 [Vitis vinifera]
           gi|296085646|emb|CBI29445.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = -2

Query: 203 QNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLSRN 24
           ++LQ LR+P S+++D I  +VA KL  +T LD+          LEAIGKHCK LT L R 
Sbjct: 105 KSLQTLRLPRSEISDPIVEEVAWKLSTITFLDVSYCRKMGAPALEAIGKHCKFLTGLRRI 164

Query: 23  MHP 15
           MHP
Sbjct: 165 MHP 167


>ref|XP_003581288.1| PREDICTED: F-box protein FBW2-like [Brachypodium distachyon]
          Length = 268

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/67 (43%), Positives = 41/67 (61%)
 Frame = -2

Query: 209 SGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLS 30
           SG+ L +L++PMS+++D    + A  LP L  LDI          +EA+G++CKSL  L 
Sbjct: 101 SGKLLNVLQVPMSEISDQAVEKYAECLPALRGLDISNCLKITSKGMEALGRNCKSLVQLK 160

Query: 29  RNMHPQG 9
           RNM PQG
Sbjct: 161 RNMPPQG 167


>ref|XP_002874499.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320336|gb|EFH50758.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = -2

Query: 236 SVLSFTLMCSGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGK 57
           S+ SF    +G +L+ L++P S +T++  V VA KL  LT LD+          ++A+GK
Sbjct: 96  SIFSFIAQHAG-SLKTLKVPRSGLTNSGVVNVAEKLSSLTFLDLSYCCKVGPEAIQALGK 154

Query: 56  HCKSLTHLSRNMHP 15
           HCKSL    RNMHP
Sbjct: 155 HCKSLREFCRNMHP 168


>gb|EPS73446.1| hypothetical protein M569_01310, partial [Genlisea aurea]
          Length = 286

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 29/65 (44%), Positives = 42/65 (64%)
 Frame = -2

Query: 197 LQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLSRNMH 18
           L+ LR+P SD++D++  QVA++LP +T+LD+          LE +GK C+SLT L R MH
Sbjct: 106 LKTLRLPRSDISDSMMEQVAARLPHITNLDLSYCINIGARGLEVVGKSCRSLTTLRRVMH 165

Query: 17  PQGTI 3
           P   I
Sbjct: 166 PLDVI 170


>ref|XP_006397241.1| hypothetical protein EUTSA_v10028810mg [Eutrema salsugineum]
           gi|557098258|gb|ESQ38694.1| hypothetical protein
           EUTSA_v10028810mg [Eutrema salsugineum]
          Length = 317

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = -2

Query: 236 SVLSFTLMCSGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGK 57
           S+ SF    +G +L+ L++P S ++++  V VA KL  LT LD+          ++AIGK
Sbjct: 96  SIFSFIAQHAG-SLKTLKVPRSGLSNSGVVNVAEKLSSLTFLDLSYCCKVGPEAIQAIGK 154

Query: 56  HCKSLTHLSRNMHP 15
           HCKSL    RNMHP
Sbjct: 155 HCKSLIEFCRNMHP 168


>gb|EOY15962.1| F-box with wd-40 2 isoform 3 [Theobroma cacao]
          Length = 345

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 29/68 (42%), Positives = 40/68 (58%)
 Frame = -2

Query: 209 SGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLS 30
           +  +L+ LR+P  +++D+I  Q A +L  +T LD+          LEAIGKHCK L  L 
Sbjct: 127 NASSLRALRLPRGEMSDSIVEQTAGRLSTITFLDLSYCGKIGARALEAIGKHCKLLVSLC 186

Query: 29  RNMHPQGT 6
           RNMHP  T
Sbjct: 187 RNMHPIDT 194


>gb|EOY15960.1| F-box with wd-40 2 isoform 1 [Theobroma cacao]
           gi|508724064|gb|EOY15961.1| F-box with wd-40 2 isoform 1
           [Theobroma cacao]
          Length = 321

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 29/68 (42%), Positives = 40/68 (58%)
 Frame = -2

Query: 209 SGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLS 30
           +  +L+ LR+P  +++D+I  Q A +L  +T LD+          LEAIGKHCK L  L 
Sbjct: 103 NASSLRALRLPRGEMSDSIVEQTAGRLSTITFLDLSYCGKIGARALEAIGKHCKLLVSLC 162

Query: 29  RNMHPQGT 6
           RNMHP  T
Sbjct: 163 RNMHPIDT 170


>ref|XP_006366228.1| PREDICTED: F-box protein FBW2-like [Solanum tuberosum]
          Length = 320

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 28/65 (43%), Positives = 39/65 (60%)
 Frame = -2

Query: 209 SGQNLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLS 30
           + ++LQ+LR+P S++ D++  QV      +T LD+          LEAIGKHCK LT L 
Sbjct: 103 NAKSLQMLRLPKSEIGDSVVEQVVGMFTNITFLDVSYCLKIGARALEAIGKHCKCLTGLR 162

Query: 29  RNMHP 15
           R MHP
Sbjct: 163 RTMHP 167


>gb|EMJ23836.1| hypothetical protein PRUPE_ppa008530mg [Prunus persica]
           gi|462419574|gb|EMJ23837.1| hypothetical protein
           PRUPE_ppa008530mg [Prunus persica]
          Length = 328

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 30/65 (46%), Positives = 39/65 (60%)
 Frame = -2

Query: 200 NLQILRIPMSDVTDAIAVQVASKLPCLTHLDIXXXXXXXXXXLEAIGKHCKSLTHLSRNM 21
           +LQ LR+P S++ D+I  Q A +L  +T LD+          LEAIGK+CK L  L RNM
Sbjct: 106 SLQTLRLPRSEIGDSIVEQTAGRLSTITFLDLSYCGKIGSRALEAIGKNCKLLVGLCRNM 165

Query: 20  HPQGT 6
           HP  T
Sbjct: 166 HPLDT 170


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