BLASTX nr result

ID: Ephedra25_contig00006668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006668
         (596 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17468.1| unknown [Picea sitchensis]                              94   4e-17
ref|NP_180813.1| cellulose synthase-like protein B4 [Arabidopsis...    59   8e-07
gb|AAL85026.1| putative cellulose synthase [Arabidopsis thaliana...    57   5e-06
ref|NP_850190.1| cellulose synthase-like protein B3 [Arabidopsis...    57   5e-06
ref|XP_004287961.1| PREDICTED: cellulose synthase-like protein H...    56   8e-06

>gb|ABR17468.1| unknown [Picea sitchensis]
          Length = 785

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 48/110 (43%), Positives = 66/110 (60%)
 Frame = +3

Query: 267 NIKERKEMDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGV 446
           N+  R E    + +  PL+E  VE P + R YA +H  L + FL  RL   P+  E Y +
Sbjct: 7   NLTLRMEKQMIAINSPPLYEKIVEKPKLYRAYAFLHFVLTLSFLGYRLL-NPL-DESYRI 64

Query: 447 WIIALCCEAYFAFTWLLEHNLRWHKLTYKTHLQRFDQRYGGSNACKLPKV 596
           WI+A  CE +FAF W+LE N+RW  + YKT+ +RF QRY G ++ KLP V
Sbjct: 65  WILAFACEIWFAFQWILEWNMRWLFVDYKTYPERFAQRYSGESSSKLPPV 114


>ref|NP_180813.1| cellulose synthase-like protein B4 [Arabidopsis thaliana]
           gi|75099970|sp|O80891.1|CSLB4_ARATH RecName:
           Full=Cellulose synthase-like protein B4; Short=AtCslB4
           gi|3298542|gb|AAC25936.1| putative cellulose synthase
           [Arabidopsis thaliana] gi|330253604|gb|AEC08698.1|
           cellulose synthase-like protein B4 [Arabidopsis
           thaliana]
          Length = 755

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 33/91 (36%), Positives = 43/91 (47%)
 Frame = +3

Query: 288 MDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGVWIIALCC 467
           M   S    PL E      Y  R   L  LGL +  L+ R+ +   K     VWI+A  C
Sbjct: 1   MAESSSPLPPLCERISHKSYFLRAVDLTILGLLLSLLLYRILHVNQKDT---VWIVAFLC 57

Query: 468 EAYFAFTWLLEHNLRWHKLTYKTHLQRFDQR 560
           E  F F WLL  N++W    YKT+ +R D+R
Sbjct: 58  ETCFTFVWLLITNIKWSPADYKTYPERLDER 88


>gb|AAL85026.1| putative cellulose synthase [Arabidopsis thaliana]
           gi|25054943|gb|AAN71948.1| putative cellulose synthase
           [Arabidopsis thaliana]
          Length = 463

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 29/91 (31%), Positives = 46/91 (50%)
 Frame = +3

Query: 288 MDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGVWIIALCC 467
           M   S    PL E      Y  RV  L  LG     L+ R+    +  +   VW++A  C
Sbjct: 1   MADSSSSLPPLCEKISYKNYFLRVVDLTILGFLFSLLLYRIL---LMNQNNSVWVVAFLC 57

Query: 468 EAYFAFTWLLEHNLRWHKLTYKTHLQRFDQR 560
           E++F+F WLL  +++W   +YK++ +R D+R
Sbjct: 58  ESFFSFIWLLITSIKWSPASYKSYPERLDER 88


>ref|NP_850190.1| cellulose synthase-like protein B3 [Arabidopsis thaliana]
           gi|75158819|sp|Q8RX83.1|CSLB3_ARATH RecName:
           Full=Cellulose synthase-like protein B3; Short=AtCslB3
           gi|19699079|gb|AAL90907.1| At2g32530/T26B15.9
           [Arabidopsis thaliana] gi|25090435|gb|AAN72301.1|
           At2g32530/T26B15.9 [Arabidopsis thaliana]
           gi|330253603|gb|AEC08697.1| cellulose synthase-like
           protein B3 [Arabidopsis thaliana]
          Length = 755

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 29/91 (31%), Positives = 46/91 (50%)
 Frame = +3

Query: 288 MDAQSEDKSPLFETTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGVWIIALCC 467
           M   S    PL E      Y  RV  L  LG     L+ R+    +  +   VW++A  C
Sbjct: 1   MADSSSSLPPLCEKISYKNYFLRVVDLTILGFLFSLLLYRIL---LMNQNNSVWVVAFLC 57

Query: 468 EAYFAFTWLLEHNLRWHKLTYKTHLQRFDQR 560
           E++F+F WLL  +++W   +YK++ +R D+R
Sbjct: 58  ESFFSFIWLLITSIKWSPASYKSYPERLDER 88


>ref|XP_004287961.1| PREDICTED: cellulose synthase-like protein H1-like [Fragaria vesca
           subsp. vesca]
          Length = 758

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
 Frame = +3

Query: 315 PLFE-TTVETPYMNRVYALVHLGLFVCFLVLRLFYGPIKQECYGV-WIIALCCEAYFAFT 488
           PL E T+V+ P + R   +V L LF C L  RLF        +G+ W++A  CE++FAF 
Sbjct: 8   PLCEKTSVKVPTLQRALEIVILFLFTCLLAYRLF----SLTDHGIPWLLAFLCESWFAFN 63

Query: 489 WLLEHNLRWHKLTYKTH 539
           W+L    +W  + YKT+
Sbjct: 64  WVLNFITQWTPMDYKTY 80


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