BLASTX nr result

ID: Ephedra25_contig00006544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006544
         (1994 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39861.1| unknown [Picea sitchensis]                             115   2e-27

>gb|ACN39861.1| unknown [Picea sitchensis]
          Length = 1011

 Score =  115 bits (288), Expect(2) = 2e-27
 Identities = 85/281 (30%), Positives = 140/281 (49%), Gaps = 8/281 (2%)
 Frame = -1

Query: 1658 FFNAKTEKEELEKLRHALDNKRSKLMDQISISYSTFAPHPRPH-NFTFPPEADG*VDEVR 1482
            FF+    KEEL ++   LD K   +  Q+ I         + + +  +P  A G  +  R
Sbjct: 248  FFSTSVNKEELGEVAQQLDVKYKHIYIQMGIEIYDVGQCKKANLSRRYPEHAVGLEESSR 307

Query: 1481 TTIDQMKWEDDEKALAVVLHGHRGSGKTTLGDAVCSDIYVNKPPGFSSDGRCAAVTLSRG 1302
              ID ++W   + A+AV+LHG  G GKTTL DAV S + +        + + + V L   
Sbjct: 308  EVIDLLEWGSQQNAVAVILHGFGGMGKTTLADAVFSMVDIK-------ECQYSTVQLFEN 360

Query: 1301 MNP-REIMEAQSSLINELENSNFEP--KSTNEGRNKIGKIIRNIPAFIYIDNVEGAEELK 1131
            ++   +I+E Q  ++ +L  S   P  +   +G+ ++ +++ ++ AFIYIDN  G  EL 
Sbjct: 361  IDSFPKIIELQKLILRDLTRSENIPQIRKHEDGQRELSRVLEDVSAFIYIDNALGERELG 420

Query: 1130 EVLPCDLNEAKKLRLLLTCRDYNHCMTLKLSRPPVFHSIKPLSEEAATKFIYKYLGNQAW 951
            ++LP DL++AKK+RLL+T RD N   +  L   P  + +K +S   AT  +   +     
Sbjct: 421  QLLPEDLSKAKKVRLLITARDLNVRKSCPLKTAPKEYRMKAISSMEATNLLKMEMFGH-- 478

Query: 950  FNTII----SKEIADMCRGIPQLLDDIVSYLLNTGEDGLEI 840
              TI+       I   C GIP +L  +V+  L   +D  E+
Sbjct: 479  METILYSYQVNHIIKKCGGIPLML-KLVARALRFAKDKEEV 518



 Score = 35.8 bits (81), Expect(2) = 2e-27
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
 Frame = -3

Query: 1989 KEFTRGTLAILGGAHFIXXXXXXXXXXLERWETISKNKEECLGLLEKMTELVSYLYQI-- 1816
            K   RG L  +G AH            LER+E +S N++EC  +L++M  L   + QI  
Sbjct: 151  KTIVRGLLQGMGTAHLATTGLLVVANILERFEDVSDNQDECFHVLKEMIFLAKVVKQIKE 210

Query: 1815 -----STLSTEISQVGDCHLQGIITECME 1744
                   +  E+    +  ++G I  C +
Sbjct: 211  RPQLQQRMHDEVKDATELIVEGSIKCCSQ 239


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