BLASTX nr result
ID: Ephedra25_contig00006345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00006345
(471 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK22541.1| unknown [Picea sitchensis] 160 1e-37
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g... 157 1e-36
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g... 157 1e-36
gb|AFK45150.1| unknown [Lotus japonicus] 157 1e-36
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 157 1e-36
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo... 157 1e-36
gb|ACU13643.1| unknown [Glycine max] 157 1e-36
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo... 157 2e-36
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo... 157 2e-36
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 156 2e-36
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo... 156 3e-36
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo... 155 5e-36
ref|XP_005646946.1| small nuclear ribo protein F [Coccomyxa sube... 155 5e-36
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]... 155 5e-36
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays] 155 7e-36
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ... 154 9e-36
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A... 154 1e-35
gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus pe... 154 1e-35
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr... 154 1e-35
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi... 154 1e-35
>gb|ABK22541.1| unknown [Picea sitchensis]
Length = 84
Score = 160 bits (406), Expect = 1e-37
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GEVLIRCNNVLYLRGVP
Sbjct: 61 GEVLIRCNNVLYLRGVP 77
>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
gi|77552372|gb|ABA95169.1| small nuclear
ribonucleoprotein F, putative, expressed [Oryza sativa
Japonica Group] gi|113645618|dbj|BAF28759.1|
Os11g0657300 [Oryza sativa Japonica Group]
gi|215693012|dbj|BAG88432.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186140|gb|EEC68567.1| hypothetical protein
OsI_36896 [Oryza sativa Indica Group]
gi|222616369|gb|EEE52501.1| hypothetical protein
OsJ_34703 [Oryza sativa Japonica Group]
Length = 86
Score = 157 bits (398), Expect = 1e-36
Identities = 74/77 (96%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
gi|573918646|ref|XP_006646960.1| PREDICTED: probable
small nuclear ribonucleoprotein F-like [Oryza
brachyantha] gi|50252055|dbj|BAD27986.1| putative small
nuclear ribonucleoprotein polypeptide F [Oryza sativa
Japonica Group] gi|113535599|dbj|BAF07982.1|
Os02g0177500 [Oryza sativa Japonica Group]
Length = 86
Score = 157 bits (398), Expect = 1e-36
Identities = 74/77 (96%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>gb|AFK45150.1| unknown [Lotus japonicus]
Length = 88
Score = 157 bits (397), Expect = 1e-36
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|561028116|gb|ESW26756.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
Length = 88
Score = 157 bits (397), Expect = 1e-36
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|255628071|gb|ACU14380.1| unknown [Glycine max]
Length = 88
Score = 157 bits (397), Expect = 1e-36
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>gb|ACU13643.1| unknown [Glycine max]
Length = 88
Score = 157 bits (397), Expect = 1e-36
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+GQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
probable small nuclear ribonucleoprotein F-like [Setaria
italica]
Length = 86
Score = 157 bits (396), Expect = 2e-36
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77
>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 157 bits (396), Expect = 2e-36
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
product [Vitis vinifera]
Length = 88
Score = 156 bits (395), Expect = 2e-36
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVP+NPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA++EEYIDGQFTGNL
Sbjct: 1 MATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 156 bits (394), Expect = 3e-36
Identities = 72/77 (93%), Positives = 77/77 (100%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNV+Y+RGVP
Sbjct: 61 GEILIRCNNVMYMRGVP 77
>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
arietinum]
Length = 88
Score = 155 bits (392), Expect = 5e-36
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+G FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>ref|XP_005646946.1| small nuclear ribo protein F [Coccomyxa subellipsoidea C-169]
gi|384248919|gb|EIE22402.1| small nuclear ribo protein F
[Coccomyxa subellipsoidea C-169]
Length = 85
Score = 155 bits (392), Expect = 5e-36
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 45 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLG 224
ATVPVNPKPFLN LTGKPVI+KLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLG
Sbjct: 3 ATVPVNPKPFLNGLTGKPVIIKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLG 62
Query: 225 EVLIRCNNVLYLRGVP 272
EVLIRCNNVLY+RGVP
Sbjct: 63 EVLIRCNNVLYMRGVP 78
>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
gi|194696080|gb|ACF82124.1| unknown [Zea mays]
gi|195609436|gb|ACG26548.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195622854|gb|ACG33257.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195639814|gb|ACG39375.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413926377|gb|AFW66309.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935832|gb|AFW70383.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935833|gb|AFW70384.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 86
Score = 155 bits (392), Expect = 5e-36
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYL SVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77
>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
Length = 86
Score = 155 bits (391), Expect = 7e-36
Identities = 71/77 (92%), Positives = 76/77 (98%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKP+IVKLKWGMEYKGYL SVDSYMNLQLA+TEEYIDGQF+GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNV+YLRGVP
Sbjct: 61 GEILIRCNNVMYLRGVP 77
>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear
ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago
truncatula]
Length = 88
Score = 154 bits (390), Expect = 9e-36
Identities = 71/77 (92%), Positives = 76/77 (98%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYI+G FTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLY+RGVP
Sbjct: 61 GEILIRCNNVLYMRGVP 77
>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
gi|548851446|gb|ERN09722.1| hypothetical protein
AMTR_s00029p00226370 [Amborella trichopoda]
Length = 86
Score = 154 bits (389), Expect = 1e-35
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MATVPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQ +GNL
Sbjct: 1 MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>gb|EMJ25019.1| hypothetical protein PRUPE_ppa014017mg [Prunus persica]
Length = 91
Score = 154 bits (389), Expect = 1e-35
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = +3
Query: 42 MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNL 221
MAT+PVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA+TEEYIDGQFTGNL
Sbjct: 1 MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNL 60
Query: 222 GEVLIRCNNVLYLRGVP 272
GE+LIRCNNVLYLRGVP
Sbjct: 61 GEILIRCNNVLYLRGVP 77
>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
sativa Japonica Group]
Length = 85
Score = 154 bits (389), Expect = 1e-35
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +3
Query: 48 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 227
TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 2 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 61
Query: 228 VLIRCNNVLYLRGVP 272
+LIRCNNVLYLRGVP
Sbjct: 62 ILIRCNNVLYLRGVP 76
>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
gi|222622299|gb|EEE56431.1| hypothetical protein
OsJ_05599 [Oryza sativa Japonica Group]
Length = 146
Score = 154 bits (389), Expect = 1e-35
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +3
Query: 48 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 227
TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQF+GNLGE
Sbjct: 63 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 122
Query: 228 VLIRCNNVLYLRGVP 272
+LIRCNNVLYLRGVP
Sbjct: 123 ILIRCNNVLYLRGVP 137