BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006290
         (1149 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22888.1| unknown [Picea sitchensis]                             150   1e-33
gb|ESW05947.1| hypothetical protein PHAVU_010G006200g [Phaseolus...   111   5e-22
ref|XP_002884721.1| PTAC13 [Arabidopsis lyrata subsp. lyrata] gi...   109   2e-21
gb|EXB89978.1| hypothetical protein L484_023631 [Morus notabilis]     108   3e-21
gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]       108   5e-21
ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsi...   108   5e-21
ref|XP_004162753.1| PREDICTED: transcription antitermination pro...   106   2e-20
ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264...   106   2e-20
ref|XP_006299690.1| hypothetical protein CARUB_v10015881mg [Caps...   106   2e-20
ref|XP_004147896.1| PREDICTED: transcription antitermination pro...   106   2e-20
ref|XP_003516923.1| PREDICTED: uncharacterized protein LOC100815...   105   3e-20
ref|XP_006429259.1| hypothetical protein CICLE_v10012141mg [Citr...   105   4e-20
ref|XP_004302675.1| PREDICTED: transcription antitermination pro...   105   4e-20
gb|AAM65289.1| unknown [Arabidopsis thaliana]                         104   6e-20
ref|XP_006480934.1| PREDICTED: uncharacterized protein LOC102628...   104   8e-20
ref|XP_006407704.1| hypothetical protein EUTSA_v10021091mg [Eutr...   102   2e-19
ref|XP_006848041.1| hypothetical protein AMTR_s00029p00189100 [A...   100   8e-19
gb|EOY07327.1| Plastid transcriptionally active isoform 1 [Theob...   100   8e-19
ref|XP_004246364.1| PREDICTED: uncharacterized protein LOC101260...    97   9e-18
gb|EOY07328.1| Plastid transcriptionally active isoform 2 [Theob...    97   1e-17

>gb|ABK22888.1| unknown [Picea sitchensis]
          Length = 379

 Score =  150 bits (378), Expect = 1e-33
 Identities = 79/191 (41%), Positives = 121/191 (63%), Gaps = 6/191 (3%)
 Frame = -1

Query: 1041 ALKSKPSPKEILEKKIAEKSEFSKLGVWE----RIEAKGTQWWTLNVVGNRVKSVSDSLS 874
            A  SKPS +E +E+K++++ +  K  + E     +  +G QWW L V  N  + V++ LS
Sbjct: 40   AKSSKPSWREEVEQKLSQRKKKPKSWMEEMNLDNLAVQGVQWWMLLVPRNSERLVAEDLS 99

Query: 873  KQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFE 694
            K FP  FPD+ FQ ++PEIP+RR+ K+GS+S++KK++FP  +F+RC LN+EI DFI+N  
Sbjct: 100  KAFPSEFPDIEFQAYLPEIPSRRKLKNGSYSESKKRMFPGYLFIRCPLNKEIHDFIRNTP 159

Query: 693  NVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEE--VAE 520
             VRGF+GR  G     +I+P PV   +++   +K +E +EA+  EI E + L EE    +
Sbjct: 160  RVRGFVGRKVGSMIRQMIKPKPVPIAEMEETFRKVKEEQEAYDIEIQE-ELLKEEGNKTD 218

Query: 519  FDSFENDNIED 487
             DS   D +ED
Sbjct: 219  DDSIGQDLLED 229


>gb|ESW05947.1| hypothetical protein PHAVU_010G006200g [Phaseolus vulgaris]
          Length = 333

 Score =  111 bits (278), Expect = 5e-22
 Identities = 56/185 (30%), Positives = 102/185 (55%), Gaps = 6/185 (3%)
 Frame = -1

Query: 1035 KSKPSPKEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLS 874
            KS  + KE +E K+ EK +  K G W      + +   G QWW + V   +   ++  L+
Sbjct: 54   KSGANWKEEVEMKLIEKPK--KKGSWMDELNLDNLAKLGLQWWVIRVSRIKGHDIAQLLA 111

Query: 873  KQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFE 694
            +   + +PD+ F++++P +  +R  K+GSFS   ++LFP  +F+RC +N+E+ DFI+ ++
Sbjct: 112  RSLAIHYPDIQFKIYVPSVNEKRRLKNGSFSVKPRQLFPGCVFLRCVMNKELHDFIREYD 171

Query: 693  NVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFD 514
             V GFIG   G     I  P P+SS  +DA+ ++ +E +E   +   E ++    +A   
Sbjct: 172  GVGGFIGSQVGNTKRMINRPKPLSSEDVDAIFRQAKEEQEKTDQAFEEEEKKAALIAGIR 231

Query: 513  SFEND 499
            + E++
Sbjct: 232  NTESE 236


>ref|XP_002884721.1| PTAC13 [Arabidopsis lyrata subsp. lyrata] gi|297330561|gb|EFH60980.1|
            PTAC13 [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score =  109 bits (273), Expect = 2e-21
 Identities = 72/231 (31%), Positives = 116/231 (50%), Gaps = 6/231 (2%)
 Frame = -1

Query: 1035 KSKPSPKEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLS 874
            KS  S +E +E+K+ +K +  +   W      + +   G QWW + V   R    +  L+
Sbjct: 58   KSGYSWREEVEEKLIKKPK-KRYATWTEELNLDTLAESGPQWWVVRVSRLRGHETAQILA 116

Query: 873  KQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFE 694
            +    +FP++ F V+ P +  +R+ K+GS S   K +FP  IF+RC LN+EI D I+  +
Sbjct: 117  RALARQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIREVD 176

Query: 693  NVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFD 514
             V GFIG   G     I +P PV    ++A+ K+ +EA+E    E  E Q   EE A   
Sbjct: 177  GVGGFIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEAQSAEEEEA--- 233

Query: 513  SFENDNIEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKK 361
                 ++  S+QLL +   N+  I  V+  + K    K T+ ++ K S+ K
Sbjct: 234  -----SLLASQQLLAS--SNSEVIEAVAESKPKRAPRKATLATETKDSKAK 277


>gb|EXB89978.1| hypothetical protein L484_023631 [Morus notabilis]
          Length = 329

 Score =  108 bits (271), Expect = 3e-21
 Identities = 69/248 (27%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
 Frame = -1

Query: 1017 KEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLR 856
            +E +E+++ +K +  +   W      +++   GTQWW + V   R +  ++ +++     
Sbjct: 75   REKVEERLLKKPK-KRYASWTEELNLDKLANLGTQWWVVRVSRVRQQESAELIARLLARN 133

Query: 855  FPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFI 676
            FP VPF+V++P +  +R  K+GS S   K LFP ++F+ C +N+EI DFI+  + V GF+
Sbjct: 134  FPLVPFKVYVPAVQVKRRLKNGSISVKPKYLFPGSVFLNCVMNKEIHDFIRECDGVGGFV 193

Query: 675  GRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQ---------RLNEEVA 523
            G   G     I +P PV  + ++A+ K+ +E ++  ++E  E Q         + N E A
Sbjct: 194  GSKVGNTKRQINKPRPVDEIDMEAIFKQAKEEQKKHEKEFEEEQKQEGTLVSGKSNVEEA 253

Query: 522  EFDSFENDNIEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKVGP*QI 343
            + DS    N     +       N   +   ST+R  S  + +   S +KV+R K+G  ++
Sbjct: 254  QLDSNGAANSSMDSKPKRRSIKNGPKLAPGSTVRVVSGTFSEFEGSLKKVNR-KLG--KV 310

Query: 342  GDVIYQMQ 319
             D + Q++
Sbjct: 311  SDAVLQVK 318


>gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]
          Length = 332

 Score =  108 bits (269), Expect = 5e-21
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 6/226 (2%)
 Frame = -1

Query: 1017 KEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLR 856
            +E +E+K+ +K +  +   W      + +   G QWW + V   R    +  L++    +
Sbjct: 63   REEVEEKLIKKPK-KRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALARQ 121

Query: 855  FPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFI 676
            FP++ F V+ P +  +R+ K+GS S   K +FP  IF+RC LN+EI D I++ + V GFI
Sbjct: 122  FPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGGFI 181

Query: 675  GRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFDSFENDN 496
            G   G     I +P PV    ++A+ K+ +EA+E    E  E  R  EE          +
Sbjct: 182  GSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEA---------S 232

Query: 495  IEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKV 358
            I  S++LL     N+  I  V+  + K    K T+ ++ K  +KK+
Sbjct: 233  ILASQELLAL--SNSDVIETVAESKPKRAPRKATLATETKAKKKKL 276


>ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsis thaliana]
            gi|15146210|gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis
            thaliana] gi|22136582|gb|AAM91077.1| AT3g09210/F3L24_8
            [Arabidopsis thaliana] gi|332641217|gb|AEE74738.1|
            plastid transcriptionally active 13 [Arabidopsis
            thaliana]
          Length = 333

 Score =  108 bits (269), Expect = 5e-21
 Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 6/226 (2%)
 Frame = -1

Query: 1017 KEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLR 856
            +E +E+K+ +K +  +   W      + +   G QWW + V   R    +  L++    +
Sbjct: 64   REEVEEKLIKKPK-KRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALARQ 122

Query: 855  FPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFI 676
            FP++ F V+ P +  +R+ K+GS S   K +FP  IF+RC LN+EI D I++ + V GFI
Sbjct: 123  FPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGGFI 182

Query: 675  GRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFDSFENDN 496
            G   G     I +P PV    ++A+ K+ +EA+E    E  E  R  EE          +
Sbjct: 183  GSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEA---------S 233

Query: 495  IEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKV 358
            I  S++LL     N+  I  V+  + K    K T+ ++ K  +KK+
Sbjct: 234  ILASQELLAL--SNSDVIETVAESKPKRAPRKATLATETKAKKKKL 277


>ref|XP_004162753.1| PREDICTED: transcription antitermination protein NusG-like [Cucumis
            sativus]
          Length = 326

 Score =  106 bits (265), Expect = 2e-20
 Identities = 66/257 (25%), Positives = 134/257 (52%), Gaps = 9/257 (3%)
 Frame = -1

Query: 1038 LKSKPSPKEILEKKIAEK--SEFS----KLGVWERIEAKGTQWWTLNVVGNRVKSVSDSL 877
            +K+  + +E +E+++  K   EF+    KL + + +   G QWW + V   R + + + L
Sbjct: 67   IKTTTNWREEVEERLCRKPKKEFANWTEKLNL-DYLAKLGPQWWVMRVARVRSQEIVERL 125

Query: 876  SKQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNF 697
            ++     +PD+ F+++ P +  +R+ K+G+++   K +FP ++F+RC +N+EI DFI+  
Sbjct: 126  ARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIREC 185

Query: 696  ENVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEF 517
            + V GF+G   G     I +P PVS   ++A+ K+ ++ +E   +  LE ++  EE    
Sbjct: 186  DGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQ--EEAPNT 243

Query: 516  DSFEND---NIEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKVGP*Q 346
             + + D   N   + +    P+     ++  ST+R  S  + +   S +K++RK  G   
Sbjct: 244  SALKTDLDTNGSTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKS-GKVT 302

Query: 345  IGDVIYQMQED*HVDFG 295
            +G  ++  +    +D G
Sbjct: 303  VGFTLFGKETLVDLDIG 319


>ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264906 [Vitis vinifera]
            gi|297740266|emb|CBI30448.3| unnamed protein product
            [Vitis vinifera]
          Length = 339

 Score =  106 bits (265), Expect = 2e-20
 Identities = 57/205 (27%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
 Frame = -1

Query: 1035 KSKPSPKEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLS 874
            K+  + +E +E+++ +K +  +   W      + +   G QWW + V     +  ++ L+
Sbjct: 61   KATTNWREEVEERLLKKPK-KRYASWTEELNLDNLALLGPQWWVVRVSRVSGQESAERLA 119

Query: 873  KQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFE 694
            +     FPD+ F+V++P +  +R+ K+GS S   K LFP  +F+RC LN+E  DFI+  +
Sbjct: 120  RSLARNFPDIDFKVYVPSVQVKRKLKNGSISVKPKPLFPGCVFLRCVLNKETHDFIRECD 179

Query: 693  NVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFD 514
             + GF+G   G     I +P PVS   I+A+ K+++E +E   +   E Q+  E +    
Sbjct: 180  GIGGFVGSKVGNTKRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQKEETI---- 235

Query: 513  SFENDNIEDSKQLLIAPRMNARDIT 439
                    + ++L+I P ++++D+T
Sbjct: 236  --------NPEKLIIYPHLDSKDVT 252


>ref|XP_006299690.1| hypothetical protein CARUB_v10015881mg [Capsella rubella]
            gi|482568399|gb|EOA32588.1| hypothetical protein
            CARUB_v10015881mg [Capsella rubella]
          Length = 329

 Score =  106 bits (264), Expect = 2e-20
 Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
 Frame = -1

Query: 1035 KSKPSPKEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLS 874
            KS  S +E +E+K+ +K +  +   W      + +   G QWW + V   R    +  L+
Sbjct: 58   KSGYSWREEVEEKLIKKPK-KRYATWTEELNLDTLAESGPQWWVVRVSRLRGHETAQILA 116

Query: 873  KQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFE 694
            +    +FP++ F V+ P +  +R+ K+GS S   K +FP  IF+RC LN+EI D I+  +
Sbjct: 117  RALARQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIREVD 176

Query: 693  NVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFD 514
             V GFIG   G     I +P PV    ++A+ K+ +E +E    E  E +R  +E     
Sbjct: 177  GVGGFIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEEQEKADSEFEEAERAEQEAT--- 233

Query: 513  SFENDNIEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKV 358
                        LL +   N+  I  V+  + K    K T+ ++ K  +KK+
Sbjct: 234  ------------LLASQNSNSDVIEAVAESKPKRAPRKATLATETKGKKKKL 273


>ref|XP_004147896.1| PREDICTED: transcription antitermination protein NusG-like [Cucumis
            sativus]
          Length = 326

 Score =  106 bits (264), Expect = 2e-20
 Identities = 66/257 (25%), Positives = 134/257 (52%), Gaps = 9/257 (3%)
 Frame = -1

Query: 1038 LKSKPSPKEILEKKIAEK--SEFS----KLGVWERIEAKGTQWWTLNVVGNRVKSVSDSL 877
            +K+  + +E +E+++  K   EF+    KL + + +   G QWW + V   R + + + L
Sbjct: 67   IKTTTNWREEVEERLCRKPKKEFANWTEKLNL-DYLAKLGPQWWVMRVARVRSQEIVERL 125

Query: 876  SKQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNF 697
            ++     +PD+ F+++ P +  +R+ K+G+++   K +FP ++F+RC +N+EI DFI+  
Sbjct: 126  ARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIREC 185

Query: 696  ENVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEF 517
            + V GF+G   G     I +P PVS   ++A+ K+ ++ +E   +  LE ++  EE    
Sbjct: 186  DGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQ--EEAPNT 243

Query: 516  DSFEND---NIEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKVGP*Q 346
             + + D   N   + +    P+     ++  ST+R  S  + +   S +K++RK  G   
Sbjct: 244  SALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKS-GKVT 302

Query: 345  IGDVIYQMQED*HVDFG 295
            +G  ++  +    +D G
Sbjct: 303  VGFTLFGKETLVDLDIG 319


>ref|XP_003516923.1| PREDICTED: uncharacterized protein LOC100815839 isoform X1 [Glycine
            max] gi|571434913|ref|XP_006573328.1| PREDICTED:
            uncharacterized protein LOC100815839 isoform X2 [Glycine
            max]
          Length = 344

 Score =  105 bits (262), Expect = 3e-20
 Identities = 65/232 (28%), Positives = 118/232 (50%), Gaps = 10/232 (4%)
 Frame = -1

Query: 1017 KEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLR 856
            +E++E+++ EK +  K G W      + +   G QWW + V   +   ++  L++     
Sbjct: 73   REVVEERLMEKPKKQK-GSWMDELNLDNLAKLGPQWWVIRVSRVKGNDIAQLLARSLAKN 131

Query: 855  FPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFI 676
            +PD+ F+++ P +  +R  K+GS+S   K+LFP  +F+RC +N+E+ DFI+ ++ V GF+
Sbjct: 132  YPDMEFKIYAPSVNVKRRLKNGSYSVKPKQLFPGCVFLRCVMNKELHDFIREYDGVGGFL 191

Query: 675  GRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEE----AFQREILEMQRLNEEVAEFDSF 508
            G   G     I  P PVS+  ++A+ ++ +E +E    AF++E        E+ A  DS 
Sbjct: 192  GSKVGNTKRQINRPKPVSAEDMEAIFRQAKEEQEKTDQAFEQE--------EKKASLDSG 243

Query: 507  ENDNIEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKVGP 352
              +   +   +L A      D       RK S+  K T  S  +++ K + P
Sbjct: 244  IRNTELEPDDILNA----IVDYKSKRGSRKASNQVKATDASSTRINYKLLVP 291


>ref|XP_006429259.1| hypothetical protein CICLE_v10012141mg [Citrus clementina]
            gi|557531316|gb|ESR42499.1| hypothetical protein
            CICLE_v10012141mg [Citrus clementina]
          Length = 338

 Score =  105 bits (261), Expect = 4e-20
 Identities = 64/226 (28%), Positives = 119/226 (52%), Gaps = 12/226 (5%)
 Frame = -1

Query: 1005 EKKIAEKSEFSKLGVWERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLRFPDVPFQVFI 826
            +K+   K+E   L   + +   G +WW + V   R +  ++ L++     FPD+ F+++ 
Sbjct: 87   KKRYTSKTEEMNL---DTLADLGPRWWIVRVTRIRYEETAERLARSLARNFPDIDFKMYA 143

Query: 825  PEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFIGRDTGLQSMS 646
            P +  +++ K+GS+S   K +FP  +F+RC LN+E  DFI+  + V GF+G   G +   
Sbjct: 144  PSVQVKKKLKNGSYSDKPKPIFPGCVFLRCVLNKERHDFIRECDGVGGFVGSKVGNRIKQ 203

Query: 645  IIEPTPVSSLQIDALMKKTREAEE----AFQRE-----ILEMQRLNEEVAEFDSFENDNI 493
            I +P PVS   ++A+ K+ +EA+E    AF+ E      ++ + LN E     +   ++ 
Sbjct: 204  INKPRPVSVDDMEAIFKEAKEAQEQADQAFEEEQQREGTIKSENLNVESNTVTTVVTESF 263

Query: 492  EDSKQLLIAPRMNARD---ITQVSTLRKKSDIWKKTMPSQQKVSRK 364
             DSK    + + +A+        ST+R  S  + + + + +KV+RK
Sbjct: 264  RDSKPKSQSGKASAKGNKLPAPGSTVRVVSGTFAEFLGTLKKVNRK 309


>ref|XP_004302675.1| PREDICTED: transcription antitermination protein NusG-like [Fragaria
            vesca subsp. vesca]
          Length = 330

 Score =  105 bits (261), Expect = 4e-20
 Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 6/181 (3%)
 Frame = -1

Query: 1035 KSKPSPKEILEKKIAEKSEFSKLGVWER------IEAKGTQWWTLNVVGNRVKSVSDSLS 874
            K+  S KE +E+K+ EK    K   W+       +  +G QWW + V   + +  +  ++
Sbjct: 64   KAGTSWKEKVEEKLLEKPT-QKFAHWKEELNINNLAREGPQWWIVRVSRIKGQETAQLIA 122

Query: 873  KQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFE 694
            +     +P + F+V+ P IP RR+ K+G++S   K LFP  +F+RC L++EI DF+   +
Sbjct: 123  RLLARNYPHMDFKVYAPSIPERRKLKNGTYSVKAKPLFPGCVFLRCVLDKEIHDFVTELD 182

Query: 693  NVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFD 514
             V GFIG   G     I  P PVS   ++A+  K +E +E       + Q+L+ E+   D
Sbjct: 183  GVGGFIGAKVGNTKRQINRPRPVSEFDMEAIFAKAKEEQEKSDLAFQQEQQLSSELKSSD 242

Query: 513  S 511
            +
Sbjct: 243  A 243


>gb|AAM65289.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score =  104 bits (260), Expect = 6e-20
 Identities = 67/226 (29%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
 Frame = -1

Query: 1017 KEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLR 856
            +E +E+K+ +K +  +   W      + +   G QWW + V   R    +  L++    +
Sbjct: 64   REEVEEKLIKKPK-KRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALARQ 122

Query: 855  FPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFI 676
            FP++ F V+ P +  +R+ K+GS S   K +FP  IF+RC LN+EI D I++ + V GFI
Sbjct: 123  FPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGGFI 182

Query: 675  GRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFDSFENDN 496
                G     I +P PV    ++A+ K+ +EA+E    E  E  R  EE          +
Sbjct: 183  VSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEA---------S 233

Query: 495  IEDSKQLLIAPRMNARDITQVSTLRKKSDIWKKTMPSQQKVSRKKV 358
            I  S++LL     N+  I  V+  + K    K T+ ++ K  +KK+
Sbjct: 234  ILASQELLAL--SNSDVIETVAESKPKRAPRKATLATETKAKKKKL 277


>ref|XP_006480934.1| PREDICTED: uncharacterized protein LOC102628920 [Citrus sinensis]
          Length = 338

 Score =  104 bits (259), Expect = 8e-20
 Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 12/226 (5%)
 Frame = -1

Query: 1005 EKKIAEKSEFSKLGVWERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLRFPDVPFQVFI 826
            +K+   K+E   L   + +   G +WW + V   R +  ++ L++     FPD+ F+++ 
Sbjct: 87   KKRYTSKTEEMNL---DTLADLGPRWWIVRVTRIRYEETAERLARSLARNFPDIDFKMYA 143

Query: 825  PEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFIGRDTGLQSMS 646
            P +  +++ K+GS+S   K +FP  +F+RC LN+E  DFI+  + V GF+G   G +   
Sbjct: 144  PSVQVKKKLKNGSYSDKPKPIFPGCVFLRCVLNKERHDFIRECDGVGGFVGSKVGNRIKQ 203

Query: 645  IIEPTPVSSLQIDALMKKTREAEEAFQREILEMQR---------LNEEVAEFDSFENDNI 493
            I +P PVS   ++A+ K+ +EA+E   +  +E Q+         LN E     +   ++ 
Sbjct: 204  INKPRPVSVDDMEAIFKEAKEAQEQADQAFVEEQQREGTIKSENLNVESNTVTTVVTESF 263

Query: 492  EDSKQLLIAPRMNARD---ITQVSTLRKKSDIWKKTMPSQQKVSRK 364
             DSK    + + +A+        ST+R  S  + + + + +KV+RK
Sbjct: 264  RDSKPKSQSGKASAKGNKLPAPGSTVRVVSGTFAEFLGTLKKVNRK 309


>ref|XP_006407704.1| hypothetical protein EUTSA_v10021091mg [Eutrema salsugineum]
            gi|557108850|gb|ESQ49157.1| hypothetical protein
            EUTSA_v10021091mg [Eutrema salsugineum]
          Length = 337

 Score =  102 bits (255), Expect = 2e-19
 Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
 Frame = -1

Query: 1035 KSKPSPKEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLS 874
            KS  S +E +E+++ +K +  +   W      + +   G QWW + V   R +  +  L+
Sbjct: 58   KSGYSWREEVEERLIKKPK-KRYASWTEELNLDTLAESGPQWWVVRVSRLRGQETAQVLA 116

Query: 873  KQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFE 694
            +    +FP++ F+V+ P +  +R+ K+G+ S   K +FP  IF+RC LN+EI D I+  +
Sbjct: 117  RALARQFPEMEFKVYAPAVQVKRKLKNGTLSVKPKPVFPGCIFIRCILNKEIHDSIRECD 176

Query: 693  NVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVA 523
             V GFIG   G     I +P PV    ++A+ K+ +E +E    E  E QR  EE +
Sbjct: 177  GVGGFIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEEQEKADSEFEEAQRAEEEAS 233


>ref|XP_006848041.1| hypothetical protein AMTR_s00029p00189100 [Amborella trichopoda]
            gi|548851346|gb|ERN09622.1| hypothetical protein
            AMTR_s00029p00189100 [Amborella trichopoda]
          Length = 338

 Score =  100 bits (250), Expect = 8e-19
 Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 6/178 (3%)
 Frame = -1

Query: 1017 KEILEKKIAEKSEFSKLGVW------ERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLR 856
            +E +E+ +++K++  K   W      + +   G QWW + +        ++ L++     
Sbjct: 73   REEIEEALSKKTKKKKKPSWTEELNLDNLSLLGPQWWMVRIARVSDVDAAEPLARSLVRN 132

Query: 855  FPDVPFQVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFI 676
            FP++ FQV+ P +  +++ K+G++S+    LFP  IF+RC LN++I DFI+ +  VRGFI
Sbjct: 133  FPNLEFQVYAPAVHVKKKLKNGTYSEKANPLFPGCIFLRCVLNKQIHDFIREYTGVRGFI 192

Query: 675  GRDTGLQSMSIIEPTPVSSLQIDALMKKTREAEEAFQREILEMQRLNEEVAEFDSFEN 502
            G   G     I +P PV + +++A+ ++ +  +E   R   + Q+    V E +  EN
Sbjct: 193  GSKVGNTIRQINKPKPVPANEMEAIFRRAKVEQEEADRVFKDEQQRERLVNETNGEEN 250


>gb|EOY07327.1| Plastid transcriptionally active isoform 1 [Theobroma cacao]
          Length = 343

 Score =  100 bits (250), Expect = 8e-19
 Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 17/209 (8%)
 Frame = -1

Query: 939 GTQWWTLNVVGNRVKSVSDSLSKQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLF 760
           G QWW + V   R    ++ +++     FPD+ F+++ P +  ++  K+GS S   K LF
Sbjct: 106 GPQWWVVRVARIRGLETAEVVARSLARNFPDIEFKMYTPAVQEKKRLKNGSISIKPKPLF 165

Query: 759 PCTIFVRCSLNREIVDFIKNFENVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTRE- 583
           P  +F++C LN+EI DFI+  + V GF+G   G     I +P PVS   ++A+ K+ +E 
Sbjct: 166 PGCVFLKCVLNKEIHDFIRECDGVGGFVGSKVGNTKRQINKPRPVSDDDMEAIFKQAKEE 225

Query: 582 ---AEEAFQRE-----ILEMQRLNEEVAEFDSFENDNIEDSKQL--------LIAPRMNA 451
              A++AFQ E      L   +LN E     +    +I DSK           +A R  +
Sbjct: 226 QEKADQAFQEEQEGEKTLTADKLNVEYNLDSNGVTTSILDSKPKRQSRKRYDTVANRAKS 285

Query: 450 RDITQVSTLRKKSDIWKKTMPSQQKVSRK 364
             +   S +R  S  + + + S +K++RK
Sbjct: 286 SKLVPGSMVRVVSGTFAEFLGSLEKLNRK 314


>ref|XP_004246364.1| PREDICTED: uncharacterized protein LOC101260563 [Solanum
            lycopersicum]
          Length = 337

 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 4/157 (2%)
 Frame = -1

Query: 1017 KEILEKKIAEKSEFSKLGVWERIEAKGTQWWTLNVVGNRVKSVSDSLSKQFPLRFPDVPF 838
            K I + K   KS   +L + + +   G QWW + V        ++ +++     FPD+ F
Sbjct: 74   KLIKKPKKQYKSWTEELNL-DNLAKLGPQWWVVRVSRVNGHETAERMARALARNFPDIDF 132

Query: 837  QVFIPEIPARRERKDGSFSKAKKKLFPCTIFVRCSLNREIVDFIKNFENVRGFIGRDTGL 658
            QV+IP +  +R+ K+G+ S   K LFP  +F+RC LN+EI DFI+    + GF+G   G 
Sbjct: 133  QVYIPSVQVKRKLKNGTLSIKPKPLFPGCVFLRCVLNKEIHDFIRECTGIGGFVGSKVGN 192

Query: 657  QSMSIIEPTPVSSLQIDALMKKTRE----AEEAFQRE 559
                I +P PV    ++A+ K+ +E    A++AF+ E
Sbjct: 193  TKRQINKPRPVDEDDLEAIFKQAKEEQEKADQAFEEE 229


>gb|EOY07328.1| Plastid transcriptionally active isoform 2 [Theobroma cacao]
          Length = 337

 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 9/162 (5%)
 Frame = -1

Query: 939 GTQWWTLNVVGNRVKSVSDSLSKQFPLRFPDVPFQVFIPEIPARRERKDGSFSKAKKKLF 760
           G QWW + V   R    ++ +++     FPD+ F+++ P +  ++  K+GS S   K LF
Sbjct: 106 GPQWWVVRVARIRGLETAEVVARSLARNFPDIEFKMYTPAVQEKKRLKNGSISIKPKPLF 165

Query: 759 PCTIFVRCSLNREIVDFIKNFENVRGFIGRDTGLQSMSIIEPTPVSSLQIDALMKKTRE- 583
           P  +F++C LN+EI DFI+  + V GF+G   G     I +P PVS   ++A+ K+ +E 
Sbjct: 166 PGCVFLKCVLNKEIHDFIRECDGVGGFVGSKVGNTKRQINKPRPVSDDDMEAIFKQAKEE 225

Query: 582 ---AEEAFQRE-----ILEMQRLNEEVAEFDSFENDNIEDSK 481
              A++AFQ E      L   +LN E     +    +I DSK
Sbjct: 226 QEKADQAFQEEQEGEKTLTADKLNVEYNLDSNGVTTSILDSK 267