BLASTX nr result
ID: Ephedra25_contig00006277
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00006277
(2158 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ... 221 1e-54
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 219 4e-54
gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus... 216 4e-53
ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutr... 215 5e-53
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera] 214 9e-53
ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 212 5e-52
gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea] 212 6e-52
ref|XP_002306437.1| pentatricopeptide repeat-containing family p... 211 1e-51
ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containi... 209 3e-51
ref|XP_003595941.1| Pentatricopeptide repeat-containing protein ... 207 1e-50
ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containi... 207 2e-50
ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [A... 205 7e-50
gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis] 204 1e-49
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ... 204 1e-49
ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containi... 204 2e-49
gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus pe... 204 2e-49
ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containi... 202 4e-49
ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containi... 202 5e-49
gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily p... 202 6e-49
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar... 201 8e-49
>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 501
Score = 221 bits (563), Expect = 1e-54
Identities = 128/450 (28%), Positives = 236/450 (52%), Gaps = 8/450 (1%)
Frame = -2
Query: 1875 KSDQNLQNPQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIF 1696
+S + + K + RK QK ++ + Q+P+P+ + +P + E K+IF
Sbjct: 20 RSSSLIPSSPKPHHFPNKTRKPHQKQQQSQSQSQSPKPVS------VFKSPNLQEAKSIF 73
Query: 1695 QNLIDSGKPPSLNSYH-AVLSSLTKSGRFEETLTIMREFEGL--GFKPTTDTYNILMQY- 1528
+ ++S P + +H ++L S +++ +R F P TY+IL+ +
Sbjct: 74 NSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHC 133
Query: 1527 ----GSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATEN 1360
S + L + + L+ M +G +P+ +V+L VR+ CTA D A E+ ++++++
Sbjct: 134 CKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKH 193
Query: 1359 AWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHT 1180
++ ++ L+K LC+ + DEM + VKP++ +YT L++ +CN + +
Sbjct: 194 CSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREA 253
Query: 1179 SKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTL 1000
++ +D+ E + G PD ++Y T+M G+ L+ EA+EVY M E G +PDL+T NTL
Sbjct: 254 TRLVDILE---EEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTL 310
Query: 999 IMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGI 820
I ++G+ +A + ++ M EKG PD TYTSLMNG+CR+G A+ L+EM+ G
Sbjct: 311 IFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGC 370
Query: 819 RPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASK 640
PN TYNTLL GL +S +A++ + M + ++++ Y + +A +
Sbjct: 371 SPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYE 430
Query: 639 LYLHVIQGEADVDHDLAERVLQLSTEEWEK 550
++ + ++ ++ D+A ST +W K
Sbjct: 431 VFDYAVESKS--LSDVAAYSTLESTLKWFK 458
>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 458
Score = 219 bits (558), Expect = 4e-54
Identities = 130/415 (31%), Positives = 225/415 (54%), Gaps = 5/415 (1%)
Frame = -2
Query: 1779 QQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPP-SLNSYHAVLSSLTKSGRFEET 1603
Q+ P PI QK L +P + E K IF +LI + + P L +H+ L S + +++
Sbjct: 43 QKIPTPIQ---QKRLFKSPELNEAKEIFNSLISTTRVPLDLRFHHSFLQSYSSISTIDDS 99
Query: 1602 LTIMREFEGL--GFKPTTDTYNILMQYGSDHGD--LEKVEKILDTMTQNGCNPNPASVEL 1435
++++R F PT TY+IL+ D L V +IL+ M NG P +V++
Sbjct: 100 ISLLRHMIKTLPSFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDI 159
Query: 1434 IVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRG 1255
VRA C+A +ED A ++ +++ +++ + + L+K LC+ + DEM
Sbjct: 160 AVRALCSAGKEDDAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSF 219
Query: 1254 HVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLS 1075
++P++ +YT L++ +CN+ K+ +AM L +R+ G PD +VY T+M G+ L+
Sbjct: 220 DLEPNLVTYTILIDNVCNS---KNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKG 276
Query: 1074 DEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSL 895
+A++V+K M E+G +PDL+T NTLI + G+ +A +K M+E G PD TYTSL
Sbjct: 277 SDAIQVFKKMKEEGIEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSL 336
Query: 894 MNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDI 715
MNGLCR+G A+ L++M+ G PN TYNTLL GL + + + ++ + + E +
Sbjct: 337 MNGLCRKGDALGALALLEDMEMKGCSPNSCTYNTLLYGLCKERLLEKGIELYNVIKEGGM 396
Query: 714 RINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEADVDHDLAERVLQLSTEEWEK 550
++ Y + EA +++ + ++ ++ + + A L+ ST +W K
Sbjct: 397 LLDTASYATFVRALCREGKVAEAYEVFDYAVESKS-LTNAAAYTTLE-STLKWLK 449
>gb|ESW06544.1| hypothetical protein PHAVU_010G056500g [Phaseolus vulgaris]
Length = 462
Score = 216 bits (549), Expect = 4e-53
Identities = 134/426 (31%), Positives = 227/426 (53%), Gaps = 15/426 (3%)
Frame = -2
Query: 1782 KQQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPPS-----LNSYHAVLSSLTKSG 1618
K+Q+P+PI P+ + + P + + K IF ++ +S K P L+SY + +S T S
Sbjct: 39 KKQSPKPI-PKPNPIFKS-PNLEDAKKIFDSIANSSKDPRFPNSLLHSYAKIAASTTDSV 96
Query: 1617 RFEETLTIMREFEGLGFKPTTDTYNILMQYG----------SDHGDLEKVEKILDTMTQN 1468
+F +T F P T++IL+ + S + + + + L++M
Sbjct: 97 KFLHHITKTLP----SFSPDRSTFHILLSHSCANPNSNSNSSSNSAISAIHQTLNSMHAA 152
Query: 1467 GCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKA 1288
G P+ A+ ++ +RA C+A D A E+ + A+++ + F L+K LC+ +
Sbjct: 153 GVTPDAATADVAIRALCSAGHLDHAIELVNEFASKHCLPDTYTFNFLVKHLCKARALSSV 212
Query: 1287 CQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYAT 1108
DEM ++ VKPD+ +YT L++ +CN K+ +AM L + + G PD +VY T
Sbjct: 213 YDFIDEMREKFGVKPDLVTYTILIDNVCNG---KNLREAMRLVSVLHEEGFKPDCFVYNT 269
Query: 1107 LMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKG 928
+M G+ L+ EA+EVY M E+G +PDLVT NTLI ++G+ +A + ++ M EKG
Sbjct: 270 IMKGYCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLIFGLSKSGRVVEAKKLLRVMAEKG 329
Query: 927 PKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAV 748
PD TYT+LMNG+CR+G V A+ L EM+ G PNE TYNTLL GL ++ + +A+
Sbjct: 330 YFPDEVTYTTLMNGMCRKGEVLAALALLGEMEGKGCSPNECTYNTLLHGLCKARLLEKAI 389
Query: 747 DFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEADVDHDLAERVLQLS 568
+F+ + E ++ + Y + EA +++ + ++ ++ D+A S
Sbjct: 390 EFYGVIKEGGLKFDTASYGTFVRALCRDGRVAEAYEVFDYAVESKSLT--DVAAYSTLES 447
Query: 567 TEEWEK 550
T +W K
Sbjct: 448 TLKWLK 453
>ref|XP_006409268.1| hypothetical protein EUTSA_v10022683mg [Eutrema salsugineum]
gi|557110430|gb|ESQ50721.1| hypothetical protein
EUTSA_v10022683mg [Eutrema salsugineum]
Length = 462
Score = 215 bits (548), Expect = 5e-53
Identities = 124/431 (28%), Positives = 225/431 (52%), Gaps = 5/431 (1%)
Frame = -2
Query: 1878 PKSDQNLQNPQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTI 1699
P+ +N +++ + + ++ ++PLRN K P +++ K++
Sbjct: 28 PRDPRNRIARRESVKISHHTDQVSREPLRNPFK-----------------TPDLSDAKSL 70
Query: 1698 FQNLIDSGKPP-SLNSYHAVLSSLTKSGRFEETLTIMREF--EGLGFKPTTDTYNILMQY 1528
F ++ + + P L +++VL S ++T+ + GF P T++IL+ +
Sbjct: 71 FNSIAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFLHILKSQPGFSPEHSTFHILLSH 130
Query: 1527 GSDHGD--LEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAW 1354
D L V +L+ M NG PN + ++ VR+ C + +A ++ +++ ++
Sbjct: 131 ACRAPDSSLSNVHLVLNLMVNNGVAPNQVTTDIAVRSLCESGRISEAMDLIKELSKNHSP 190
Query: 1353 HNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSK 1174
+ + LLK LC+ G +D + DEM + VKPD+ SYT L++ +CN+ K+ +
Sbjct: 191 PDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDLVSYTILIDNVCNS---KNLRE 247
Query: 1173 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 994
AM L + DAG PD ++Y T+M GF L+ EA+ VYK M E+G +PD +T NTLI
Sbjct: 248 AMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEEGVEPDRITYNTLIF 307
Query: 993 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRP 814
++G+ ++A + ++ M+E G +PD TYTSLMNG+CR+G A+ L+EM+ G P
Sbjct: 308 GLSKSGRVEEARKYLQTMVEAGYEPDAVTYTSLMNGMCRKGASLGALSLLEEMEARGCAP 367
Query: 813 NEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLY 634
N TYNTLL GL ++ + + ++ + M N +++ Y + EA +++
Sbjct: 368 NACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKLESSAYATLVRGLVRSGKVAEAYEVF 427
Query: 633 LHVIQGEADVD 601
+ + ++ D
Sbjct: 428 DYAVDSKSLTD 438
Score = 107 bits (267), Expect = 2e-20
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Frame = -2
Query: 1719 ITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLTIMREF-EGLGFKPTTDTYN 1543
I+E + + L + PP +Y+ +L L K G + + E E KP +Y
Sbjct: 174 ISEAMDLIKELSKNHSPPDTYTYNFLLKHLCKCGSLDVVYEFIDEMKETFEVKPDLVSYT 233
Query: 1542 ILMQYGSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATE 1363
IL+ + +L + +++ + G P+ I++ FCT + +A ++ M E
Sbjct: 234 ILIDNVCNSKNLREAMRLVSALGDAGFKPDCFLYNTIMKGFCTLSKGSEAIIVYKKMKEE 293
Query: 1362 NAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKH 1183
+ + L+ L + G++++A + M++ G+ +PD +YT+LM G+C +
Sbjct: 294 GVEPDRITYNTLIFGLSKSGRVEEARKYLQTMVEAGY-EPDAVTYTSLMNGMCRKGASLG 352
Query: 1182 TSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 1003
A+ L E M G +P+ Y TL+ G K L D+ +E+Y +M +G K + T
Sbjct: 353 ---ALSLLEEMEARGCAPNACTYNTLLYGLCKARLMDKGIELYGLMKSNGVKLESSAYAT 409
Query: 1002 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSL 895
L+ R+G+ +A E ++ DV YT+L
Sbjct: 410 LVRGLVRSGKVAEAYEVFDYAVDSKSLTDVSAYTTL 445
>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
Length = 472
Score = 214 bits (546), Expect = 9e-53
Identities = 125/428 (29%), Positives = 222/428 (51%), Gaps = 5/428 (1%)
Frame = -2
Query: 1878 PKSDQNLQNPQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTI 1699
PK L+ PQK + + ++P + K ++ PI+ ++ +P + + K +
Sbjct: 27 PKQSTVLETPQKPHHFPK------KRPQPSGKTKKTRTPIEDPKSPVIFNSPNLLDAKKL 80
Query: 1698 FQNLIDSGKPP-SLNSYHAVLSSLTKSGRFEETLTIMREF--EGLGFKPTTDTYNILMQY 1528
F ++ + P L ++A+L S + ++++ +R F P TY+IL+
Sbjct: 81 FASITTTSTTPLDLRFHNALLQSYSSISTVNDSISFLRHMIKSQPSFSPERSTYHILLSQ 140
Query: 1527 G--SDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAW 1354
S + DL V + L+ M +G P+ + ++ VR+ C+A E+ A E+ +++ +++
Sbjct: 141 SCKSPNSDLSAVHQTLNLMVTHGFPPDRVTTDIAVRSLCSAGREEHAIELVKELSLKHSP 200
Query: 1353 HNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSK 1174
+ + +++ LC+ + DE+ +KPD+ +YT L++ +CN K+ +
Sbjct: 201 PDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDLVTYTILIDNVCNG---KNLRE 257
Query: 1173 AMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIM 994
A L E + +AG PD YVY T+M G+ L+ EA+ VYK M E+G +PDLVT NTLI
Sbjct: 258 ATRLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVEPDLVTYNTLIF 317
Query: 993 IHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRP 814
++G+ +A + + M E G PD TYTSLMNGLCREG A+ L+EM+ G P
Sbjct: 318 GLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNALGALALLEEMEAKGCSP 377
Query: 813 NEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLY 634
N TYNTLL GL + + R ++ + M +++ + Y + EA + +
Sbjct: 378 NSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCKEGRVAEAYEAF 437
Query: 633 LHVIQGEA 610
+V++ ++
Sbjct: 438 DYVVESKS 445
Score = 111 bits (278), Expect = 1e-21
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 1/264 (0%)
Frame = -2
Query: 1671 PPSLNSYHAVLSSLTKSGRFEETLTIMREFEG-LGFKPTTDTYNILMQYGSDHGDLEKVE 1495
PP +Y+ ++ L K+ + E + KP TY IL+ + +L +
Sbjct: 200 PPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDLVTYTILIDNVCNGKNLREAT 259
Query: 1494 KILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKML 1315
++L+ + + G P+ I++ +C + +A ++ M E +L + L+ L
Sbjct: 260 RLLEVLGEAGFKPDCYVYNTIMKGYCILDKGSEAIGVYKKMKEEGVEPDLVTYNTLIFGL 319
Query: 1314 CRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGL 1135
+ G++ +A + D M + GH PD +YT+LM GLC A A+ L E M G
Sbjct: 320 SKSGRVKEARKFLDIMAEMGHF-PDAVTYTSLMNGLCREGNALG---ALALLEEMEAKGC 375
Query: 1134 SPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALE 955
SP+ Y TL++G KL + + +E+Y +M G K + + T + C+ G+ +A E
Sbjct: 376 SPNSCTYNTLLHGLCKLRMLERGIELYGVMKSGGMKLEKASYATFVRALCKEGRVAEAYE 435
Query: 954 QVKNMLEKGPKPDVFTYTSLMNGL 883
++E DV Y++L N L
Sbjct: 436 AFDYVVESKSFDDVTAYSTLENSL 459
>ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
isoform X1 [Cicer arietinum]
gi|502155526|ref|XP_004510106.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Cicer arietinum]
Length = 468
Score = 212 bits (540), Expect = 5e-52
Identities = 133/451 (29%), Positives = 232/451 (51%), Gaps = 10/451 (2%)
Frame = -2
Query: 1872 SDQNLQNPQKNEEYHQNQRKIDQK-----PLRNVKKQQNPEPIDPEIQKLLSTAPTITEI 1708
S+ NL N + R +K P ++ K QQ +P P L +P + E
Sbjct: 13 SNPNLINSSSSLPSSSKPRYFPKKIPSNFPGKSRKLQQESQPPKPVS---LFKSPCLQEA 69
Query: 1707 KTIFQNLIDSGKPPSLNSYH-AVLSSLTKSGRFEETLTIMREFEGL--GFKPTTDTYNIL 1537
K+IF +++ S P+ +H ++L S +++ +R F P TY+IL
Sbjct: 70 KSIFNSIVKSSNVPNDFRFHNSLLQSYASVSTINDSIAFLRHMTKTHPSFTPDKSTYHIL 129
Query: 1536 MQYGSDHGD--LEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATE 1363
+ D L ++ + L+ M +G +P+ +V+L VR+ C+A D+A E+ +++++
Sbjct: 130 LTQSCKSTDTTLSQIHQTLNLMVSDGVSPDKVTVDLAVRSLCSAGRMDEAVELIKELSSK 189
Query: 1362 NAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKH 1183
+ ++ F L+K LC+ + EM + VKPD+ ++T L++ +CNA+ +
Sbjct: 190 HCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGVKPDLVTFTILIDNVCNAKNLRE 249
Query: 1182 TSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNT 1003
T + L + + G D Y Y T+M G+ K+ +EA+EVY M E G +PDL+T NT
Sbjct: 250 T---LSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAGVEPDLITYNT 306
Query: 1002 LIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVG 823
LI ++G+ +A + ++ M EKG PD TYTSLMNGLCR+G + A+ L+EM+ +G
Sbjct: 307 LIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSAIALLEEMEAIG 366
Query: 822 IRPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEAS 643
PN TYNTLL GL +S +A++ + +M +++ Y + +A
Sbjct: 367 CSPNSCTYNTLLHGLCKSRLFDKAMELYGEMKSGCLKLEMASYATFVRALCRAGRIADAY 426
Query: 642 KLYLHVIQGEADVDHDLAERVLQLSTEEWEK 550
+++ + ++ ++ D+A ST +W K
Sbjct: 427 EVFDYAVESKSLT--DVAAYSTLESTLKWFK 455
>gb|EPS73675.1| hypothetical protein M569_01080 [Genlisea aurea]
Length = 469
Score = 212 bits (539), Expect = 6e-52
Identities = 123/382 (32%), Positives = 206/382 (53%), Gaps = 7/382 (1%)
Frame = -2
Query: 1818 RKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGK--PPSLNSYHA 1645
+K+D K +R +K+ + P ++ + + + + K++F +L+ G P N ++
Sbjct: 37 QKVDSKRVRRPQKKSDSTP-KIDVSSIAFESSNLADAKSLFNSLVSGGAGIPRDPNFCNS 95
Query: 1644 VLSSLTKSGRFEETLTIMREF--EGLGFKPTTDTYNILMQYG---SDHGDLEKVEKILDT 1480
+L S + ++++ + + F P TYNIL++ +D + V IL+
Sbjct: 96 ILQSFSSVATPQDSIMFLNHMLKKHPSFSPNRLTYNILLKQSCSSADEQSVSGVHGILNL 155
Query: 1479 MTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGK 1300
M +G PN +S + VRA C + E+ A E+ +++T+N + + L+K L +
Sbjct: 156 MKDSGFPPNQSSASIAVRALCESGREEHAVELVKELSTKNLPPDEHTYNTLVKHLVKNRS 215
Query: 1299 IDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRY 1120
+ +M + G VKP + +YT +++ +CN+ K+ +AM L + + G PDRY
Sbjct: 216 LSSVNCFVKDMREFG-VKPTLITYTIMIDNVCNS---KNLREAMRLLSVLSEEGYKPDRY 271
Query: 1119 VYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNM 940
VY T+M G+ LN E L VYK M ++ +PD VT NTLI C++G+ A + + M
Sbjct: 272 VYNTIMKGYCTLNQGGEVLGVYKKMQDERIEPDNVTYNTLIFGLCKSGRWSYAKKFLGVM 331
Query: 939 LEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGLARSDNI 760
EKG PDVFTYTSLMNG+CR G + +A+ L+EM+ +PN TYNTLL GL ++ +
Sbjct: 332 NEKGLSPDVFTYTSLMNGMCRGGNISEAMALLEEMESRECKPNSHTYNTLLQGLCKAGML 391
Query: 759 SRAVDFFEDMAENDIRINRDGY 694
+AV+ F+ M I + Y
Sbjct: 392 DKAVEVFQVMKNGSIELGTGSY 413
Score = 109 bits (273), Expect = 4e-21
Identities = 65/273 (23%), Positives = 127/273 (46%)
Frame = -2
Query: 1701 IFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLTIMREFEGLGFKPTTDTYNILMQYGS 1522
+ + L PP ++Y+ ++ L K+ +++ G KPT TY I++
Sbjct: 187 LVKELSTKNLPPDEHTYNTLVKHLVKNRSLSSVNCFVKDMREFGVKPTLITYTIMIDNVC 246
Query: 1521 DHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLC 1342
+ +L + ++L +++ G P+ I++ +CT + + ++ M E +
Sbjct: 247 NSKNLREAMRLLSVLSEEGYKPDRYVYNTIMKGYCTLNQGGEVLGVYKKMQDERIEPDNV 306
Query: 1341 AFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDL 1162
+ L+ LC+ G+ A + M ++G + PDV +YT+LM G+C + S+AM L
Sbjct: 307 TYNTLIFGLCKSGRWSYAKKFLGVMNEKG-LSPDVFTYTSLMNGMCRGG---NISEAMAL 362
Query: 1161 FETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCR 982
E M P+ + Y TL+ G K + D+A+EV+++M + + + + CR
Sbjct: 363 LEEMESRECKPNSHTYNTLLQGLCKAGMLDKAVEVFQVMKNGSIELGTGSYGSFLRALCR 422
Query: 981 NGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 883
G+ A E ++ P V Y++L + L
Sbjct: 423 KGKVAVAYEVFDYAVDSKSFPTVSAYSTLESTL 455
>ref|XP_002306437.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222855886|gb|EEE93433.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 462
Score = 211 bits (536), Expect = 1e-51
Identities = 126/440 (28%), Positives = 226/440 (51%), Gaps = 7/440 (1%)
Frame = -2
Query: 1848 QKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKP 1669
Q+ ++ H +K+ +K + + P P K L ++ E K++F + I + K
Sbjct: 24 QQQQQPHYFPKKLTKKNSPKPHETETPPP-----HKSLFKTSSLNEAKSLFNSFISTTKA 78
Query: 1668 PSLNS---YHAVLSSLTKSGRFEETLTIMREFEGL--GFKPTTDTYNILMQYGSDHGD-- 1510
P L++ +++ L S T +++++++ P TY++L+ D
Sbjct: 79 PLLDNLRLHNSFLQSYTSISTLDDSISLLDHMVKTLPSLSPDRSTYHVLLSQSCREPDSS 138
Query: 1509 LEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKN 1330
L +K+L+ M G PN +V++ +R+ C+A D A + + +++++ + +
Sbjct: 139 LSSAQKVLNLMINKGFKPNQFTVDVAIRSLCSAGRVDDAILLVKEFSSKHSKPDTFTYNF 198
Query: 1329 LLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETM 1150
L+K LC+ + DEM +KPD+ +YT L++ +CNA K+ +A L +
Sbjct: 199 LVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLVTYTILIDNVCNA---KNIREADRLVAVL 255
Query: 1149 RDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQT 970
++ GL PD ++Y T+M G+ LN EA+ +YK M E+G +PDLVT NTLI + G+
Sbjct: 256 KECGLKPDAFLYNTIMKGYCLLNKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRV 315
Query: 969 DQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTL 790
+A + +K M+E G PD TYTSLMNG+CREG V A L+EM+ G PN TYNTL
Sbjct: 316 SEAKKLLKIMVESGHFPDAVTYTSLMNGMCREGDVLGAAALLEEMELKGCSPNSCTYNTL 375
Query: 789 LVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEA 610
L G + +++ V+ + + + +++ Y + EA +++ + ++ ++
Sbjct: 376 LHGFCKGRRLNKGVELYGVIKKGGMKLETASYATFVRALCREGRVAEAYEVFDYAVESKS 435
Query: 609 DVDHDLAERVLQLSTEEWEK 550
D+A ST +W K
Sbjct: 436 LT--DVAAYTTLESTLKWLK 453
>ref|XP_004232547.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Solanum lycopersicum]
Length = 469
Score = 209 bits (533), Expect = 3e-51
Identities = 128/440 (29%), Positives = 229/440 (52%), Gaps = 6/440 (1%)
Frame = -2
Query: 1851 PQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGK 1672
P Y+ + + +K ++ + Q P I L + ++++ KT+F +LI S +
Sbjct: 32 PTSKPHYYPKKSQSPKKKPTSITEPQLPSSI------LAFDSTSLSDAKTLFNSLISSTR 85
Query: 1671 PPSLNS--YHAVLSSLTKSGRFEETLTIMREFEGLG--FKPTTDTYNILMQYGSDHGDLE 1504
PS ++ Y+AVL S + + ++++ + + F P TY++L+ DL
Sbjct: 86 NPSTDNKFYNAVLQSFSSNSTLQDSIFFLNHMIKVHPPFSPDRFTYHVLLVQSCKSVDLS 145
Query: 1503 --KVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKN 1330
V ++L+ MT NG PN S ++ VR C++ E++A E+ +++++++ + +
Sbjct: 146 LSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYNF 205
Query: 1329 LLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETM 1150
+++ LC+ + EM + +KPD+ +YT +++ +CN+ K+ +A L +
Sbjct: 206 IIRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDNVCNS---KNLREATRLLGVL 262
Query: 1149 RDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQT 970
+ G PD YVY T+M G+ L+ E L VYK M E+G KPDLVT NTLI ++G+
Sbjct: 263 SEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVKPDLVTYNTLIYGLSKSGRV 322
Query: 969 DQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTL 790
A + + M+E+G PD TYTSLMNG+CRE AV L++M+ G PN TYNTL
Sbjct: 323 KDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVALLEKMEARGCAPNSCTYNTL 382
Query: 789 LVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEA 610
L GL + + + + ++ M +N ++ Y + +A +++ + I+ ++
Sbjct: 383 LHGLCKGRLLDKGMKLYDVMKQNGTKLETGSYGTFLRALCRNGRVADAYEVFDYAIESKS 442
Query: 609 DVDHDLAERVLQLSTEEWEK 550
D+A ST +W K
Sbjct: 443 LT--DVAAYTTLESTLKWLK 460
>ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 472
Score = 207 bits (528), Expect = 1e-50
Identities = 124/454 (27%), Positives = 234/454 (51%), Gaps = 11/454 (2%)
Frame = -2
Query: 1875 KSDQNLQNPQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIF 1696
+S + + K + RK QK ++ + Q+P+P+ + +P + E K+IF
Sbjct: 36 RSSSLIPSSPKPHHFPNKTRKPHQKQQQSQSQSQSPKPVS------VFKSPNLQEAKSIF 89
Query: 1695 QNLIDSGKPPSLNSYH-AVLSSLTKSGRFEETLTIMREFEGL--GFKPTTDTYNILMQY- 1528
+ ++S P + +H ++L S +++ +R F P TY+IL+ +
Sbjct: 90 NSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHC 149
Query: 1527 ----GSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATEN 1360
S + L + + L+ M +G +P+ +V+L VR+ CTA D A E+ ++++++
Sbjct: 150 CKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKH 209
Query: 1359 AWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHT 1180
++ ++ L+K LC+ + V P++ +YT L++ +CN + +
Sbjct: 210 CSPDIYSYNFLVKNLCKSRTLSL-------------VYPNLVTYTILIDNVCNTKNLREA 256
Query: 1179 SKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTL 1000
++ +D+ E + G PD ++Y T+M G+ L+ EA+EVY M E G +PDL+T NTL
Sbjct: 257 TRLVDILE---EEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTL 313
Query: 999 IMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGI 820
I ++G+ +A + ++ M EKG PD TYTSLMNG+CR+G A+ L+EM+ G
Sbjct: 314 IFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGC 373
Query: 819 RPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASK 640
PN TYNTLL GL +S +A++ + M + ++++ Y + +A +
Sbjct: 374 SPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYE 433
Query: 639 LYLHVIQGEADVD---HDLAERVLQLSTEEWEKA 547
++ + ++ ++ D + E L+ S ++ +KA
Sbjct: 434 VFDYAVESKSLSDVAAYSTLESTLKWSRKQKKKA 467
>ref|XP_006340813.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Solanum tuberosum]
Length = 467
Score = 207 bits (526), Expect = 2e-50
Identities = 127/440 (28%), Positives = 228/440 (51%), Gaps = 6/440 (1%)
Frame = -2
Query: 1851 PQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGK 1672
P Y+ + + +K L + + Q P I + + ++++ KT+F +LI + +
Sbjct: 30 PTSKPHYYPKKSQTPKKKLTSNTEPQLPSSI------VAFDSTSLSDAKTLFNSLISNSR 83
Query: 1671 PPSLNS--YHAVLSSLTKSGRFEETLTIMREFEGLG--FKPTTDTYNILMQYGSDHGDLE 1504
P+ ++ Y+AVL S + + ++++ + + F P TY++L+ DL
Sbjct: 84 NPTSDNKFYNAVLQSFSSNSTLQDSIFFLNHVIKVHPPFSPDRFTYHVLLIQSCKSVDLS 143
Query: 1503 --KVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKN 1330
V ++L+ MT NG PN S ++ VR C++ E++A E+ +++++++ + +
Sbjct: 144 LSPVHQVLNLMTTNGFPPNKVSTDIAVRTLCSSGHEEQAIELVKELSSKDSPPDTYTYNF 203
Query: 1329 LLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETM 1150
+++ LC+ + EM + +KPD+ +YT +++ +CN+ K+ +A L +
Sbjct: 204 IVRHLCKNRPLSTMNNFIKEMREGFDIKPDLVTYTIMIDNVCNS---KNLREATRLLGVL 260
Query: 1149 RDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQT 970
+ G PD YVY T+M G+ L+ E L VYK M E+G KPDLVT NTLI ++G+
Sbjct: 261 SEEGYKPDCYVYNTIMKGYCMLSQGGEVLGVYKKMQEEGVKPDLVTYNTLIYGLSKSGRV 320
Query: 969 DQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTL 790
A + + M+E+G PD TYTSLMNG+CRE AV L++M+ G PN TYNTL
Sbjct: 321 KDAKKFLNVMMEEGHVPDAVTYTSLMNGMCREADPLGAVALLEKMEARGCAPNSCTYNTL 380
Query: 789 LVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEA 610
L GL + + + + ++ M +N ++ Y + EA ++ + I+ ++
Sbjct: 381 LHGLCKGRLLDKGMKLYDVMKQNSTKLETGSYGTFLRALCRNGRVAEAYDVFDYAIESKS 440
Query: 609 DVDHDLAERVLQLSTEEWEK 550
D+A ST +W K
Sbjct: 441 LT--DVAAYTTLESTLKWLK 458
>ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda]
gi|548861268|gb|ERN18652.1| hypothetical protein
AMTR_s00065p00182300 [Amborella trichopoda]
Length = 470
Score = 205 bits (521), Expect = 7e-50
Identities = 130/395 (32%), Positives = 213/395 (53%), Gaps = 9/395 (2%)
Frame = -2
Query: 1851 PQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDS-G 1675
P KN + QN +K K + K + + + P++ L P+I+E K + + + G
Sbjct: 35 PFKNTK--QNHKK---KQSSSSTKGEQQQQLAPKLPLNLFKTPSISEAKATYDAALAARG 89
Query: 1674 KPPSLNSYHAVLSSLTK-SGRFEETLTIMREF-EGLGFKPTTDTYNILMQYGSDHGDLEK 1501
S ++A+L +L+++ E GF P T+NI++ + D+
Sbjct: 90 HTRSTPFHNALLKDFCLLRPNLPNSLSLVHHMKEKSGFAPDHATFNIILGLCCSNADMAA 149
Query: 1500 VEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWH------NLCA 1339
V + L MT +G P+ S +LIVRA C++ ED+ACE+F D+A+ N ++
Sbjct: 150 VHQTLALMTASGFPPDNVSCDLIVRALCSSALEDEACELFKDIASSNLKSRSSSPPDMFT 209
Query: 1338 FKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLF 1159
F L++ LC+ + Q DE G ++PD+ +YT L++ +C + K+ +A L
Sbjct: 210 FNFLVRHLCKTRAMSAVYQFIDEARALG-LEPDLVTYTILIDAVCRS---KNLREATRLL 265
Query: 1158 ETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRN 979
+ +AG PD ++Y T+M G+ L+ EA+ VYK M E+GC+PDLVT NTLI
Sbjct: 266 GVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEGCEPDLVTYNTLIYGLSNA 325
Query: 978 GQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTY 799
G+ D A++ ++ M+E+G PD TYTSLMNG+CR+G A+ L EM+ G PN TY
Sbjct: 326 GKEDIAMKYLRVMVEEGHLPDTVTYTSLMNGMCRKGNATGALELLKEMEDRGCEPNSCTY 385
Query: 798 NTLLVGLARSDNISRAVDFFEDMAENDIRINRDGY 694
+TLL GL ++ N+ + ++ + M E +++ Y
Sbjct: 386 STLLQGLFKAGNLDKGLEVYGVMKEGSMKMEAACY 420
Score = 106 bits (265), Expect = 4e-20
Identities = 69/266 (25%), Positives = 119/266 (44%)
Frame = -2
Query: 1680 SGKPPSLNSYHAVLSSLTKSGRFEETLTIMREFEGLGFKPTTDTYNILMQYGSDHGDLEK 1501
S PP + +++ ++ L K+ + E LG +P TY IL+ +L +
Sbjct: 201 SSSPPDMFTFNFLVRHLCKTRAMSAVYQFIDEARALGLEPDLVTYTILIDAVCRSKNLRE 260
Query: 1500 VEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLK 1321
++L + + G P+ I++ +C +A ++ M E +L + L+
Sbjct: 261 ATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEGCEPDLVTYNTLIY 320
Query: 1320 MLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDA 1141
L GK D A + M++ GH+ PD +YT+LM G+C A + A++L + M D
Sbjct: 321 GLSNAGKEDIAMKYLRVMVEEGHL-PDTVTYTSLMNGMCRKGNA---TGALELLKEMEDR 376
Query: 1140 GLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQA 961
G P+ Y+TL+ G K D+ LEVY +M E K + ++ CR + A
Sbjct: 377 GCEPNSCTYSTLLQGLFKAGNLDKGLEVYGVMKEGSMKMEAACYAVILRALCRGERVADA 436
Query: 960 LEQVKNMLEKGPKPDVFTYTSLMNGL 883
E + DV Y++L + L
Sbjct: 437 YEVFDYAVASKSLTDVAAYSALESSL 462
Score = 66.2 bits (160), Expect = 5e-08
Identities = 41/169 (24%), Positives = 78/169 (46%)
Frame = -2
Query: 1713 EIKTIFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLTIMREFEGLGFKPTTDTYNILM 1534
E T+++ + + G P L +Y+ ++ L+ +G+ + + +R G P T TY LM
Sbjct: 295 EAITVYKKMREEGCEPDLVTYNTLIYGLSNAGKEDIAMKYLRVMVEEGHLPDTVTYTSLM 354
Query: 1533 QYGSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAW 1354
G+ ++L M GC PN + +++ A DK E++ M +
Sbjct: 355 NGMCRKGNATGALELLKEMEDRGCEPNSCTYSTLLQGLFKAGNLDKGLEVYGVMKEGSMK 414
Query: 1353 HNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGL 1207
+ +L+ LCRG ++ A ++FD + + DV++Y+ L L
Sbjct: 415 MEAACYAVILRALCRGERVADAYEVFDYAVASKSL-TDVAAYSALESSL 462
>gb|EXC35267.1| hypothetical protein L484_026589 [Morus notabilis]
Length = 444
Score = 204 bits (520), Expect = 1e-49
Identities = 122/398 (30%), Positives = 212/398 (53%), Gaps = 4/398 (1%)
Frame = -2
Query: 1728 APTITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLTIMREFEGL--GFKPTT 1555
+P ++ K++F N I S P LN ++ L S +++++++R F P
Sbjct: 45 SPDLSAAKSLF-NSISSTVNPDLNHTNSFLKSYASISTVDDSISLLRHMIKTHPAFSPDR 103
Query: 1554 DTYNILMQYGSDHGD--LEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIF 1381
TY+IL+ + D L V +L+ M+ G +P+ + ++ VRA C A + D A ++F
Sbjct: 104 STYHILLTHSCAAPDPSLSPVHGVLNLMSSAGFSPDKVTADIAVRALCYAGKIDHAVQLF 163
Query: 1380 LDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCN 1201
+M+ ++ + + L+K LC+ + + D+ +KPD+ +YT +++ +CN
Sbjct: 164 DEMSLRHSVPDSYTYNFLVKCLCKCRPLSTIYEFIDKTRSSFGLKPDLVTYTIIIDNVCN 223
Query: 1200 ARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPD 1021
++ + ++ L + + G PD ++Y T+M G+ L+ EA+EVY M E+G +PD
Sbjct: 224 SKNLREITR---LVAVLGEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNKMKENGVEPD 280
Query: 1020 LVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALD 841
VT NTLI ++G+ +A + +K M EKG PDV TYTSLMNGLCRE V A L+
Sbjct: 281 TVTYNTLIFGLAKSGRAKEARKYLKIMAEKGHSPDVVTYTSLMNGLCRERDVLGAYALLE 340
Query: 840 EMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXX 661
EMK G PNE TYNTLL G ++ + R V+ + M E + ++ Y
Sbjct: 341 EMKERGCEPNECTYNTLLHGFCKAKMVERGVELYRVMKERGMELDTAAYATLVRVFCRRG 400
Query: 660 XLEEASKLYLHVIQGEADVDHDLAERVLQLSTEEWEKA 547
+ EA +++ + ++ ++ + + A L+ + +E KA
Sbjct: 401 EVAEAYEVFDYAVESKS-LTNVAAYSTLESALKEVNKA 437
Score = 97.4 bits (241), Expect = 2e-17
Identities = 69/289 (23%), Positives = 118/289 (40%)
Frame = -2
Query: 1749 IQKLLSTAPTITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLTIMREFEGLG 1570
++ L P T + I + G P L +Y ++ ++ S E ++ G
Sbjct: 182 VKCLCKCRPLSTIYEFIDKTRSSFGLKPDLVTYTIIIDNVCNSKNLREITRLVAVLGEEG 241
Query: 1569 FKPTTDTYNILMQYGSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKAC 1390
FKP YN +M + +C +A
Sbjct: 242 FKPDCFLYNTIM-----------------------------------KGYCMLSRGSEAI 266
Query: 1389 EIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEG 1210
E++ M + + L+ L + G+ +A + M ++GH PDV +YT+LM G
Sbjct: 267 EVYNKMKENGVEPDTVTYNTLIFGLAKSGRAKEARKYLKIMAEKGH-SPDVVTYTSLMNG 325
Query: 1209 LCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGC 1030
LC R A L E M++ G P+ Y TL++GF K + + +E+Y++M E G
Sbjct: 326 LCRER---DVLGAYALLEEMKERGCEPNECTYNTLLHGFCKAKMVERGVELYRVMKERGM 382
Query: 1029 KPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 883
+ D TL+ + CR G+ +A E +E +V Y++L + L
Sbjct: 383 ELDTAAYATLVRVFCRRGEVAEAYEVFDYAVESKSLTNVAAYSTLESAL 431
>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329915|gb|EFH60334.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 462
Score = 204 bits (519), Expect = 1e-49
Identities = 114/393 (29%), Positives = 214/393 (54%), Gaps = 5/393 (1%)
Frame = -2
Query: 1764 PIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPP-SLNSYHAVLSSLTKSGRFEETLTIMR 1588
P +P ++ + P +++ K++F ++ + + P L +++VL S ++T+ + +
Sbjct: 50 PREPSLRNPFKS-PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAAVDDTVKLFQ 108
Query: 1587 EF--EGLGFKPTTDTYNILMQYGSDHGD--LEKVEKILDTMTQNGCNPNPASVELIVRAF 1420
F+P T+ IL+ + D + V ++L+ M NG P+ + ++ VR+
Sbjct: 109 HILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSL 168
Query: 1419 CTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPD 1240
C D+A ++ ++ +++ + + LLK LC+ + + DEM VKPD
Sbjct: 169 CETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPD 228
Query: 1239 VSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALE 1060
+ S+T L++ +CN+ K+ +AM L + +AG PD ++Y T+M GF L+ EA+
Sbjct: 229 LVSFTILIDNVCNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIG 285
Query: 1059 VYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLC 880
VYK M E+G +PD +T NTLI ++G+ ++A +K M++ G +PD TYTSLMNG+C
Sbjct: 286 VYKKMKEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 345
Query: 879 REGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRD 700
R+G A+ L+EM+ G PN+ TYNTLL GL ++ + + ++ +E M + +++ +
Sbjct: 346 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKSSGVKLETN 405
Query: 699 GYIXXXXXXXXXXXLEEASKLYLHVIQGEADVD 601
GY + EA +++ + + ++ D
Sbjct: 406 GYATLVRSLVKSGKVAEAYEVFDYAVDSKSLTD 438
Score = 101 bits (252), Expect = 1e-18
Identities = 80/339 (23%), Positives = 144/339 (42%), Gaps = 41/339 (12%)
Frame = -2
Query: 1788 VKKQQNPEPIDPEIQKLLSTA-----PTITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTK 1624
+K Q N P LLS A +I+ + + ++++G P + + SL +
Sbjct: 111 LKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE 170
Query: 1623 SGRFEETLTIMREFEGLGFKPTTDTYNILMQYGSDHGDLEKVEKILDTMTQ--------- 1471
+GR +E +M+E P T TYN L+++ DL V + +D M
Sbjct: 171 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 230
Query: 1470 -------NGCN--------------------PNPASVELIVRAFCTAREEDKACEIFLDM 1372
N CN P+ I++ FCT + +A ++ M
Sbjct: 231 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAIGVYKKM 290
Query: 1371 ATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARL 1192
E + + L+ L + G++++A M+ G+ +PD ++YT+LM G+C
Sbjct: 291 KEEGVEPDQITYNTLIYGLSKSGRVEEARMYLKTMVDAGY-EPDTATYTSLMNGMCRKG- 348
Query: 1191 AKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVT 1012
+ A+ L E M G +P+ Y TL++G K L D+ +E+Y++M G K +
Sbjct: 349 --ESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYELMKSSGVKLETNG 406
Query: 1011 CNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSL 895
TL+ ++G+ +A E ++ D Y++L
Sbjct: 407 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLTDASAYSTL 445
>ref|XP_006467049.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
isoform X1 [Citrus sinensis]
gi|568825365|ref|XP_006467050.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X2 [Citrus sinensis]
gi|568825367|ref|XP_006467051.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g17670-like isoform X3 [Citrus sinensis]
Length = 465
Score = 204 bits (518), Expect = 2e-49
Identities = 128/457 (28%), Positives = 225/457 (49%), Gaps = 6/457 (1%)
Frame = -2
Query: 1902 SQKNEKDQPKSDQNLQNPQKNEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAP 1723
S N P Q L++P ++ ++N+ + N +++ P P ++ +P
Sbjct: 13 SSNNLLKTPAPTQALKSP--HQFLYKNENPSKKSAAANKSEKKTPAPA------VIFKSP 64
Query: 1722 TITEIKTIFQNLIDSGK--PPSLNSYHAVLSSLTKSGRFEETLTIMREF--EGLGFKPTT 1555
++E IF +L+ + P ++++L S +++++++ F P
Sbjct: 65 ELSEAIKIFNSLVTATMQTPRDRTFHNSLLQSYASISTVDDSISLLNHMIKANPSFNPDR 124
Query: 1554 DTYNILMQYGSDHGD--LEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIF 1381
TY+IL+ D + K L MT NG PN + ++ VR+ C+ D A E+
Sbjct: 125 STYHILLAQSCQAPDNSFSSIRKTLSLMTTNGYPPNQGTTDIAVRSLCSVNRLDDAIELV 184
Query: 1380 LDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCN 1201
++ + ++ + L+K LC+ + D+M +KP++ +YT L++ +CN
Sbjct: 185 KGLSLNSFPPDIFTYNFLVKCLCKCRSLTTVYNFVDQMRASLGIKPNLVTYTILIDNVCN 244
Query: 1200 ARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPD 1021
K+ +AM L + D+G PD +VY T+M G+ L+ E + VY M E+G +PD
Sbjct: 245 T---KNLREAMRLVSALSDSGFKPDCFVYNTIMKGYCNLSRGGEVIGVYNKMKEEGVEPD 301
Query: 1020 LVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALD 841
LVT NTLI + G+ +A + +K M+E G PD TYTSLMNG+CREG A+ L+
Sbjct: 302 LVTYNTLIFGLSKCGRVGEAKKFLKIMVEAGFLPDAVTYTSLMNGMCREGDALGALALLE 361
Query: 840 EMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXX 661
EM+ G PN TYNTLL GL +S + + ++ + M E +++ Y
Sbjct: 362 EMEGKGCSPNSCTYNTLLYGLCKSRLMEKGIELYRAMKEGGVKLETAAYATLVRALCRHG 421
Query: 660 XLEEASKLYLHVIQGEADVDHDLAERVLQLSTEEWEK 550
+ EA +++ + ++ ++ D+A ST +W K
Sbjct: 422 KVAEAYEVFDYAVESKSLT--DVAAYTTLESTLKWLK 456
>gb|EMJ05384.1| hypothetical protein PRUPE_ppa015299mg [Prunus persica]
Length = 464
Score = 204 bits (518), Expect = 2e-49
Identities = 120/419 (28%), Positives = 217/419 (51%), Gaps = 5/419 (1%)
Frame = -2
Query: 1842 NEEYHQNQRKIDQKPLRNVKKQQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPP- 1666
NE +K + + Q + + +P + ++A +++ K +F +++ + K P
Sbjct: 26 NESPSHRPHHFPKKTTKKIPPQLSEKTREPTFRNPFTSA-NLSDAKKVFNSIVTTTKVPL 84
Query: 1665 SLNSYHAVLSSLTKSGRFEETLTIMREFEGLG--FKPTTDTYNILMQYGSDHGD--LEKV 1498
L ++A+L S +++++ F P TY++L+ D L+ V
Sbjct: 85 DLRVHNALLQSYASISTLNDSISLFNHMIKTHPTFSPDRSTYHVLLSQSCKAPDQTLKPV 144
Query: 1497 EKILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKM 1318
++L+ M NG +PN + ++ VR+ C++ A E+ +M+ +NA + + L+K
Sbjct: 145 HQVLNFMLTNGFSPNKVTTDIAVRSLCSSNNVGLAVELIKEMSLKNAAPDSYTYNFLVKC 204
Query: 1317 LCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAG 1138
LC+ + +E +KPD+ +YT L++ + N + ++ +D+ + G
Sbjct: 205 LCKSSAVSTVYDFIEEFKTSFGLKPDIITYTILIDNVTNRENLREATRLVDV---LAKEG 261
Query: 1137 LSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQAL 958
+ PD Y+Y T+M G LNL +EALEV K M E+G +PDLVT NTLI + G+ +A
Sbjct: 262 IRPDCYIYNTIMKGCCTLNLGNEALEVLKKMKENGVEPDLVTYNTLIFGLSKCGRVVEAK 321
Query: 957 EQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGL 778
+ + M+E G PD TYTSLMNGLCR+G V A+G L+EM+ G PN TYNTLL GL
Sbjct: 322 KYLGVMVEMGHFPDAVTYTSLMNGLCRKGDVLGALGLLEEMQEKGCEPNVCTYNTLLHGL 381
Query: 777 ARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEADVD 601
++ + + +D + M E ++++ Y + +A +++ + ++ ++ D
Sbjct: 382 CKAKLLEKGLDLYGVMKECGMKLDTASYATLVRALCREGRVADAYEVFDYAVESKSVTD 440
Score = 116 bits (290), Expect = 5e-23
Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 1/294 (0%)
Frame = -2
Query: 1773 NPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLTI 1594
N D ++ L S+ ++ I + + + P S +Y+ ++ L KS
Sbjct: 159 NKVTTDIAVRSLCSSNNVGLAVELIKEMSLKNAAPDSY-TYNFLVKCLCKSSAVSTVYDF 217
Query: 1593 MREFE-GLGFKPTTDTYNILMQYGSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAFC 1417
+ EF+ G KP TY IL+ ++ +L + +++D + + G P+ I++ C
Sbjct: 218 IEEFKTSFGLKPDIITYTILIDNVTNRENLREATRLVDVLAKEGIRPDCYIYNTIMKGCC 277
Query: 1416 TAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDV 1237
T ++A E+ M +L + L+ L + G++ +A + M++ GH PD
Sbjct: 278 TLNLGNEALEVLKKMKENGVEPDLVTYNTLIFGLSKCGRVVEAKKYLGVMVEMGHF-PDA 336
Query: 1236 SSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEV 1057
+YT+LM GLC A+ L E M++ G P+ Y TL++G K L ++ L++
Sbjct: 337 VTYTSLMNGLCRKG---DVLGALGLLEEMQEKGCEPNVCTYNTLLHGLCKAKLLEKGLDL 393
Query: 1056 YKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSL 895
Y +M E G K D + TL+ CR G+ A E +E DV YT+L
Sbjct: 394 YGVMKECGMKLDTASYATLVRALCREGRVADAYEVFDYAVESKSVTDVAAYTTL 447
>ref|XP_004135005.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Cucumis sativus]
Length = 464
Score = 202 bits (515), Expect = 4e-49
Identities = 120/414 (28%), Positives = 214/414 (51%), Gaps = 6/414 (1%)
Frame = -2
Query: 1824 NQRKIDQKPLRNVKK-QQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPP-SLNSY 1651
+ +K KP R Q + P P++ + +A ++ + K ++ + + + K P +L +
Sbjct: 31 SSKKATPKPSRKTPSGQSSGHPEKPKLPTVFKSA-SLADAKKLYSSFVSATKAPFNLRVH 89
Query: 1650 HAVLSSLTKSGRFEETLTIMREFEGL--GFKPTTDTYNILMQYGSDHGD--LEKVEKILD 1483
+++L S ++++ +R + F P T++IL+ + D L V++IL+
Sbjct: 90 NSLLQSYASIATLNDSISFLRHMSKVQPSFSPDQSTFHILLSTSGNRPDSTLASVQQILN 149
Query: 1482 TMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGG 1303
M NG NP+ + +L VR+ C+ D+A E+ +++ ++ ++ + +L+K LC+
Sbjct: 150 FMVTNGFNPDKVTADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSR 209
Query: 1302 KIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDR 1123
+ EM KPD+ +YT L++ +CN+ + +AM L + G PD
Sbjct: 210 ALSTVYNFIVEMRSSCGAKPDLVTYTILIDNVCNSN---NLREAMRLVSLLYKEGFKPDC 266
Query: 1122 YVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKN 943
+VY T+M G+ + EA+ VYK M E G +PD+VT NTLI ++G+ +A +
Sbjct: 267 FVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDI 326
Query: 942 MLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGLARSDN 763
M E G PD TYTSLMNG+CREG A+ L EM+ G PN TYNTLL GL++S
Sbjct: 327 MAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRL 386
Query: 762 ISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEADVD 601
+ R ++ + M D+++ Y + EA +++ + ++ ++ D
Sbjct: 387 LDRGIELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEVFDYAVESKSLTD 440
Score = 108 bits (269), Expect = 1e-20
Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 2/299 (0%)
Frame = -2
Query: 1773 NPEPIDPEIQ-KLLSTAPTITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLT 1597
NP+ + ++ + L + + E + + L PP + +Y+ ++ L KS
Sbjct: 157 NPDKVTADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYN 216
Query: 1596 IMREFEG-LGFKPTTDTYNILMQYGSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAF 1420
+ E G KP TY IL+ + +L + +++ + + G P+ I++ +
Sbjct: 217 FIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGY 276
Query: 1419 CTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPD 1240
C +A ++ M ++ F L+ L + G++ +A D M + GH PD
Sbjct: 277 CMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHF-PD 335
Query: 1239 VSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALE 1060
+YT+LM G+C A A+ L + M G +P+ Y TL++G +K L D +E
Sbjct: 336 AVTYTSLMNGMCREGNALG---ALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIE 392
Query: 1059 VYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 883
+Y +M K + + +T + CR+G+ +A E +E DV Y SL + L
Sbjct: 393 LYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEVFDYAVESKSLTDVSAYLSLESTL 451
>ref|XP_004163411.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like
[Cucumis sativus]
Length = 464
Score = 202 bits (514), Expect = 5e-49
Identities = 121/414 (29%), Positives = 213/414 (51%), Gaps = 6/414 (1%)
Frame = -2
Query: 1824 NQRKIDQKPLRNVKK-QQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPP-SLNSY 1651
+ +K KP R Q + P P++ + +A ++ + K ++ + I + K P +L +
Sbjct: 31 SSKKATPKPSRKTPSGQSSGHPEKPKLPTVFKSA-SLADAKKLYSSFISATKAPFNLRVH 89
Query: 1650 HAVLSSLTKSGRFEETLTIMREFEGL--GFKPTTDTYNILMQYGSDHGD--LEKVEKILD 1483
+++L S ++++ +R + F P T++IL+ + D L V++IL+
Sbjct: 90 NSLLQSYASIATLNDSISFLRHMSKVQPSFSPDQSTFHILLSTSGNRPDSTLASVQQILN 149
Query: 1482 TMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGG 1303
M NG NP+ + +L VR+ C+ D+A E+ +++ ++ ++ + +L+K LC+
Sbjct: 150 FMVTNGFNPDKVTADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSR 209
Query: 1302 KIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDR 1123
+ EM KPD+ +YT L++ +CN+ + +AM L + G PD
Sbjct: 210 ALSTVYNFIVEMRSSCGAKPDLVTYTILIDNVCNSN---NLREAMRLVSLLYKEGFKPDC 266
Query: 1122 YVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKN 943
+VY T+M G+ + EA+ VYK M E G +PD+VT NTLI ++G+ +A +
Sbjct: 267 FVYNTIMKGYCMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDI 326
Query: 942 MLEKGPKPDVFTYTSLMNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGLARSDN 763
M E G PD TYTSLMNG+CREG A+ L EM+ G PN TYNTLL GL++S
Sbjct: 327 MAEMGHFPDAVTYTSLMNGMCREGNALGALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRL 386
Query: 762 ISRAVDFFEDMAENDIRINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEADVD 601
+ R ++ + M D+++ Y + EA + + + ++ ++ D
Sbjct: 387 LDRGIELYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEAFDYAVESKSLTD 440
Score = 108 bits (270), Expect = 9e-21
Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 2/299 (0%)
Frame = -2
Query: 1773 NPEPIDPEIQ-KLLSTAPTITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTKSGRFEETLT 1597
NP+ + ++ + L + + E + + L PP + +Y+ ++ L KS
Sbjct: 157 NPDKVTADLAVRSLCSVGLVDEAVELVKELSQKHTPPDIYTYNHLVKQLCKSRALSTVYN 216
Query: 1596 IMREFEG-LGFKPTTDTYNILMQYGSDHGDLEKVEKILDTMTQNGCNPNPASVELIVRAF 1420
+ E G KP TY IL+ + +L + +++ + + G P+ I++ +
Sbjct: 217 FIVEMRSSCGAKPDLVTYTILIDNVCNSNNLREAMRLVSLLYKEGFKPDCFVYNTIMKGY 276
Query: 1419 CTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPD 1240
C +A ++ M ++ F L+ L + G++ +A D M + GH PD
Sbjct: 277 CMVGRGAEAIGVYKKMKEVGLEPDVVTFNTLIFGLSKSGRVKEARNFLDIMAEMGHF-PD 335
Query: 1239 VSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALE 1060
+YT+LM G+C A A+ L + M G +P+ Y TL++G +K L D +E
Sbjct: 336 AVTYTSLMNGMCREGNALG---ALSLLKEMEAKGCNPNSCTYNTLLHGLSKSRLLDRGIE 392
Query: 1059 VYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGL 883
+Y +M K + + +T + CR+G+ +A E +E DV Y SL + L
Sbjct: 393 LYGLMKSCDMKLETASYSTFVRALCRSGRIAEAYEAFDYAVESKSLTDVSAYLSLESTL 451
>gb|EOX90708.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 464
Score = 202 bits (513), Expect = 6e-49
Identities = 116/384 (30%), Positives = 200/384 (52%), Gaps = 5/384 (1%)
Frame = -2
Query: 1737 LSTAPTITEIKTIFQNLIDSGKPP-SLNSYHAVLSSLTKSGRFEETLTIMREFEGL--GF 1567
L +P ++ K +F +++ + K P L ++ +L S ++++ + F
Sbjct: 60 LFKSPDLSSAKKVFNSIVVTTKAPIDLRFHNTLLQSYASVSTVNDSISFLHHMVKAHPSF 119
Query: 1566 KPTTDTYNILMQYGSDHGD--LEKVEKILDTMTQNGCNPNPASVELIVRAFCTAREEDKA 1393
P TY+IL+ D L V + L+ M NG PN + ++ +R+ C A D A
Sbjct: 120 SPDRSTYHILLSQSCKAPDSSLSPVRQTLNLMVTNGLKPNQVTTDVAIRSLCEAGRIDHA 179
Query: 1392 CEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLME 1213
E+ +++ +++ + F L+K LC+ + D+M +KPD+ +YT L++
Sbjct: 180 VELVKELSLKHSPPDNFTFNFLVKNLCKCRTLSTVYGFIDDMKSSFGIKPDLVTYTILID 239
Query: 1212 GLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDG 1033
+CN+ K+ +AM L + ++G PD +VY T+M G+ L+ E +EVYK M E+G
Sbjct: 240 NVCNS---KNLREAMRLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKEEG 296
Query: 1032 CKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSLMNGLCREGRVDDAV 853
+PDLVT NTLI ++G+ +A + + M+E G PD TYTSLMNG+CREG AV
Sbjct: 297 VEPDLVTYNTLIFGLSKSGRVKEARKYLDIMVESGHFPDAVTYTSLMNGMCREGNALGAV 356
Query: 852 GALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDIRINRDGYIXXXXXX 673
L+EM+R G PN TYNTLL GL + + + ++ + M + + + Y
Sbjct: 357 LLLEEMERKGCSPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMMLEKASYATLVRAL 416
Query: 672 XXXXXLEEASKLYLHVIQGEADVD 601
+ EA +++ + ++ ++ D
Sbjct: 417 CREGRVAEAYEVFDYAVESKSLTD 440
Score = 104 bits (259), Expect = 2e-19
Identities = 66/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Frame = -2
Query: 1671 PPSLNSYHAVLSSLTKSGRFEETLTIMREFEG-LGFKPTTDTYNILMQYGSDHGDLEKVE 1495
PP +++ ++ +L K + + + G KP TY IL+ + +L +
Sbjct: 192 PPDNFTFNFLVKNLCKCRTLSTVYGFIDDMKSSFGIKPDLVTYTILIDNVCNSKNLREAM 251
Query: 1494 KILDTMTQNGCNPNPASVELIVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKML 1315
+++ + ++G P+ I++ +C + + E++ M E +L + L+ L
Sbjct: 252 RLVGVLNESGFKPDCFVYNTIMKGYCMLSKGSEIIEVYKKMKEEGVEPDLVTYNTLIFGL 311
Query: 1314 CRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGL 1135
+ G++ +A + D M++ GH PD +YT+LM G+C A A+ L E M G
Sbjct: 312 SKSGRVKEARKYLDIMVESGHF-PDAVTYTSLMNGMCREGNALG---AVLLLEEMERKGC 367
Query: 1134 SPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALE 955
SP+ Y TL++G K L ++ +E+Y+ M G + + TL+ CR G+ +A E
Sbjct: 368 SPNSCTYNTLLHGLCKGRLMEKGMELYRAMKSAGMMLEKASYATLVRALCREGRVAEAYE 427
Query: 954 QVKNMLEKGPKPDVFTYTSL 895
+E DV Y++L
Sbjct: 428 VFDYAVESKSLTDVAAYSTL 447
>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
[Arabidopsis thaliana] gi|28973597|gb|AAO64123.1| unknown
protein [Arabidopsis thaliana]
gi|330251570|gb|AEC06664.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 463
Score = 201 bits (512), Expect = 8e-49
Identities = 114/395 (28%), Positives = 212/395 (53%), Gaps = 5/395 (1%)
Frame = -2
Query: 1779 QQNPEPIDPEIQKLLSTAPTITEIKTIFQNLIDSGKPP-SLNSYHAVLSSLTKSGRFEET 1603
Q P +P ++ + P +++ K++F ++ + + P L +++VL S +T
Sbjct: 46 QNTQAPREPSLRNPFKS-PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDT 104
Query: 1602 LTIMREF--EGLGFKPTTDTYNILMQYGSDHGD--LEKVEKILDTMTQNGCNPNPASVEL 1435
+ + + F+P T+ IL+ + D + V ++L+ M NG P+ + ++
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDI 164
Query: 1434 IVRAFCTAREEDKACEIFLDMATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRG 1255
VR+ C D+A ++ ++ +++ + + LLK LC+ + + DEM
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 1254 HVKPDVSSYTTLMEGLCNARLAKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLS 1075
VKPD+ S+T L++ +CN+ K+ +AM L + +AG PD ++Y T+M GF L+
Sbjct: 225 DVKPDLVSFTILIDNVCNS---KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 1074 DEALEVYKMMSEDGCKPDLVTCNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSL 895
EA+ VYK M E+G +PD +T NTLI + G+ ++A +K M++ G +PD TYTSL
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 894 MNGLCREGRVDDAVGALDEMKRVGIRPNEKTYNTLLVGLARSDNISRAVDFFEDMAENDI 715
MNG+CR+G A+ L+EM+ G PN+ TYNTLL GL ++ + + ++ +E M + +
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 714 RINRDGYIXXXXXXXXXXXLEEASKLYLHVIQGEA 610
++ +GY + EA +++ + + ++
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKS 436
Score = 102 bits (253), Expect = 9e-19
Identities = 81/339 (23%), Positives = 144/339 (42%), Gaps = 41/339 (12%)
Frame = -2
Query: 1788 VKKQQNPEPIDPEIQKLLSTA-----PTITEIKTIFQNLIDSGKPPSLNSYHAVLSSLTK 1624
+K Q N P LLS A +I+ + + ++++G P + + SL +
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCE 171
Query: 1623 SGRFEETLTIMREFEGLGFKPTTDTYNILMQYGSDHGDLEKVEKILDTMTQ--------- 1471
+GR +E +M+E P T TYN L+++ DL V + +D M
Sbjct: 172 TGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLV 231
Query: 1470 -------NGCN--------------------PNPASVELIVRAFCTAREEDKACEIFLDM 1372
N CN P+ I++ FCT + +A ++ M
Sbjct: 232 SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM 291
Query: 1371 ATENAWHNLCAFKNLLKMLCRGGKIDKACQLFDEMLQRGHVKPDVSSYTTLMEGLCNARL 1192
E + + L+ L + G++++A M+ G+ +PD ++YT+LM G+C
Sbjct: 292 KEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY-EPDTATYTSLMNGMCRKG- 349
Query: 1191 AKHTSKAMDLFETMRDAGLSPDRYVYATLMNGFAKLNLSDEALEVYKMMSEDGCKPDLVT 1012
+ A+ L E M G +P+ Y TL++G K L D+ +E+Y+MM G K +
Sbjct: 350 --ESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 1011 CNTLIMIHCRNGQTDQALEQVKNMLEKGPKPDVFTYTSL 895
TL+ ++G+ +A E ++ D Y++L
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446