BLASTX nr result

ID: Ephedra25_contig00006068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00006068
         (537 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004956137.1| PREDICTED: ultraviolet-B receptor UVR8-like ...   213   2e-53
ref|NP_001168691.1| putative regulator of chromosome condensatio...   212   5e-53
ref|XP_006658533.1| PREDICTED: ultraviolet-B receptor UVR8-like ...   211   6e-53
ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   210   1e-52
tpg|DAA39684.1| TPA: putative regulator of chromosome condensati...   210   2e-52
ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group] g...   208   7e-52
gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japo...   208   7e-52
gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indi...   208   7e-52
ref|XP_002316910.2| regulator of chromosome condensation family ...   204   1e-50
ref|XP_002329104.1| predicted protein [Populus trichocarpa] gi|5...   203   2e-50
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig...   199   4e-49
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]   199   4e-49
gb|EMJ13050.1| hypothetical protein PRUPE_ppa004744mg [Prunus pe...   196   3e-48
gb|EXB76306.1| hypothetical protein L484_025664 [Morus notabilis]     194   8e-48
gb|EOY12878.1| Regulator of chromosome condensation (RCC1) famil...   194   8e-48
gb|EOY12877.1| Regulator of chromosome condensation (RCC1) famil...   194   8e-48
ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu...   194   8e-48
ref|XP_006348235.1| PREDICTED: probable E3 ubiquitin-protein lig...   193   2e-47
ref|XP_006827796.1| hypothetical protein AMTR_s00009p00266800 [A...   192   3e-47
ref|XP_004244214.1| PREDICTED: probable E3 ubiquitin-protein lig...   192   3e-47

>ref|XP_004956137.1| PREDICTED: ultraviolet-B receptor UVR8-like [Setaria italica]
          Length = 483

 Score =  213 bits (542), Expect = 2e-53
 Identities = 97/144 (67%), Positives = 119/144 (82%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +RV  P    V  +S SHN
Sbjct: 105 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHN 164

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA +T+SGEVFT GDNSS CCGHGEVGR IF+PT+VEALKG+ CKQVATGLSFTVILTR
Sbjct: 165 HAAFLTESGEVFTCGDNSSLCCGHGEVGRTIFRPTQVEALKGVSCKQVATGLSFTVILTR 224

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
           +GQ++TC SN HG LG GDT++++
Sbjct: 225 DGQVYTCGSNTHGQLGHGDTVDRA 248



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTG-KYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV TG  +  ++  DG +YTCGS   G LGHG    + T            V Q++   +
Sbjct: 211 QVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTVDRATPKIIELFEGPTQVVQIAAGAS 270

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK--GIFCKQVATGLSFTVIL 80
           +   VT+ G V ++G  +++C GHG+    + +P  +++ K   I   +V+ G    V L
Sbjct: 271 YTFAVTEDGTVHSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 329

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
              G ++T      G LG GD  +K+
Sbjct: 330 DALGHVYTWGRGYCGALGHGDENDKT 355



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSH 257
           V+V+ G  H + ++  G +YT G   CG LGHG E  + TS   +    N +  QV    
Sbjct: 317 VRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDK-TSPELISSLKNQVAVQVCARK 375

Query: 256 NHAALVTQSGEVFTWGDNSSYCCGHGEVGRV--IFKPTRVEALKGIFCKQVATGLSFTVI 83
               ++T  G V+ +G       G  + G    + KP  +E+L+  +  Q++TGL  TV 
Sbjct: 376 RKTFVLTDEGSVYAFGWMGFGSLGFPDRGSSDKVMKPRVLESLRDHYVSQISTGLYHTVA 435

Query: 82  LTRNGQIFTCRSN*HG*LG 26
           +T  G +F    N    LG
Sbjct: 436 VTNKGIVFGFGDNERAQLG 454



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
 Frame = -3

Query: 433 VQVTTGKYHTLMV-EDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPL-NVLVTQVSGS 260
           VQ+  G  +T  V EDG++++ GSC    LGHG +  +            N+ V +VS  
Sbjct: 263 VQIAAGASYTFAVTEDGTVHSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAG 322

Query: 259 HNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVIL 80
             HA  +   G V+TWG       GHG+       P  + +LK     QV      T +L
Sbjct: 323 DEHAVALDALGHVYTWGRGYCGALGHGDENDKT-SPELISSLKNQVAVQVCARKRKTFVL 381

Query: 79  TRNGQIF 59
           T  G ++
Sbjct: 382 TDEGSVY 388


>ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays] gi|223950263|gb|ACN29215.1| unknown [Zea
           mays] gi|414884497|tpg|DAA60511.1| TPA: putative
           regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  212 bits (539), Expect = 5e-53
 Identities = 98/144 (68%), Positives = 118/144 (81%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +RV  P    V  +S SHN
Sbjct: 105 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHN 164

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA VT+SGEVFT GDNSS CCGHGEVGR IF+P +VEALKGI CKQVATGLSFTVILTR
Sbjct: 165 HAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTR 224

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
           +GQ++TC SN HG LG GDT++++
Sbjct: 225 DGQVYTCGSNTHGQLGHGDTIDRA 248



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
 Frame = -3

Query: 478 SSLCWGRN-------RNMLMEKV------QVTTG-KYHTLMVEDGSLYTCGSCICGVLGH 341
           SSLC G         R M +E +      QV TG  +  ++  DG +YTCGS   G LGH
Sbjct: 182 SSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGH 241

Query: 340 GAETTQCTSLTRVQLPLNVLVTQVSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVI 161
           G    + T            V Q++   ++   VT  G V ++G  +++C GHG+    +
Sbjct: 242 GDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDEL 301

Query: 160 FKPTRVEALK--GIFCKQVATGLSFTVILTRNGQIFTCRSN*HG*LGPGDTLEKS 2
             P  +++ K   I   +V+ G    V L   G ++T      G LG GD  +K+
Sbjct: 302 L-PRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKT 355



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
 Frame = -3

Query: 433 VQVTTGKYHTLMV-EDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPL-NVLVTQVSGS 260
           VQ+  G  +T  V +DG++++ GSC    LGHG +  +            N+ V +VS  
Sbjct: 263 VQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAG 322

Query: 259 HNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVIL 80
             HA  +   G V+TWG       GHG+       P  + +LKG    QV      T +L
Sbjct: 323 DEHAVALDALGHVYTWGRGYCGALGHGDENDKT-SPELIGSLKGQVAVQVCARKRKTFVL 381

Query: 79  TRNGQI 62
           T  G +
Sbjct: 382 TDEGSV 387


>ref|XP_006658533.1| PREDICTED: ultraviolet-B receptor UVR8-like [Oryza brachyantha]
          Length = 435

 Score =  211 bits (538), Expect = 6e-53
 Identities = 95/144 (65%), Positives = 117/144 (81%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +R+  P    V  +S SHN
Sbjct: 56  MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCPAFSRIPFPSLSRVVNISASHN 115

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V  SGEVFT GDNSS+CCGHGEVGR +F+PT++ ALKGIFCKQVATGLSFTVILT 
Sbjct: 116 HAAFVMDSGEVFTCGDNSSFCCGHGEVGRTVFRPTQINALKGIFCKQVATGLSFTVILTA 175

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
           +GQ++TC SN HG LG GDTL+++
Sbjct: 176 DGQVYTCGSNTHGQLGHGDTLDRA 199



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
 Frame = -3

Query: 430 QVTTG-KYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVL--VTQVSGS 260
           QV TG  +  ++  DG +YTCGS   G LGHG +T    +   + L   VL  V QV+  
Sbjct: 162 QVATGLSFTVILTADGQVYTCGSNTHGQLGHG-DTLDRATPKFIDLFDEVLAPVEQVAAG 220

Query: 259 HNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK--GIFCKQVATGLSFTV 86
            ++   VT  G V+++G  +++C GHG+    + +P  +E+ K   I   +V+ G    V
Sbjct: 221 VSYTFAVTADGTVYSFGSCTNFCLGHGDQHDEL-RPRAIESFKRRNIHVVRVSAGDEHAV 279

Query: 85  ILTRNGQIFTCRSN*HG*LGPGDTLEKS 2
            L   G ++T      G LG GD  +K+
Sbjct: 280 ALDALGHVYTWGRGYCGALGHGDENDKT 307



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSH 257
           V+V+ G  H + ++  G +YT G   CG LGHG E  + TS   +    + +  QV    
Sbjct: 269 VRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDK-TSPELISSLKSQVAVQVCARK 327

Query: 256 NHAALVTQSGEVFTWGDNSSYCCGHGEVGRV--IFKPTRVEALKGIFCKQVATGLSFTVI 83
               ++T  G VF +G       G  + G    + KP  +++L+  +  Q++TGL  TV 
Sbjct: 328 RKTFVITDEGSVFAFGWMGFGSLGFPDRGSSDKVMKPRVLDSLRDHYVSQISTGLYHTVA 387

Query: 82  LTRNGQIFTCRSN*HG*LG 26
           +T  G +F    N    LG
Sbjct: 388 VTNRGIVFGFGDNERAQLG 406


>ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  210 bits (535), Expect = 1e-52
 Identities = 94/144 (65%), Positives = 117/144 (81%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +RV  P    V  +S  HN
Sbjct: 105 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHN 164

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA VT++G+VFT GDNSS CCGHG+VGR IF+PT++EALKG FCKQVATGLSFTVILTR
Sbjct: 165 HAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTR 224

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
            GQ++TC SN HG LG GDT++++
Sbjct: 225 EGQVYTCGSNTHGQLGHGDTIDRA 248



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTG-KYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV TG  +  ++  +G +YTCGS   G LGHG    +           +  V QV+   +
Sbjct: 211 QVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGAS 270

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK--GIFCKQVATGLSFTVIL 80
           +   VT  G V ++G  +++C GHG+    +  P  +++ K   I   +V+ G    V L
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHNELL-PRAIQSFKRRNIHVVRVSAGDEHAVAL 329

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
              G ++T      G LG GD  +K+
Sbjct: 330 DALGYVYTWGRGYCGALGHGDENDKT 355



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSH 257
           V+V+ G  H + ++  G +YT G   CG LGHG E  + TS   +      +  QV    
Sbjct: 317 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDK-TSPELIGSLKGQVAVQVCARK 375

Query: 256 NHAALVTQSGEV--FTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVI 83
               ++T  G V  F W    S      E    + KP  +++L+G +  Q++TGL  TV 
Sbjct: 376 RKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVA 435

Query: 82  LTRNGQIFTCRSN*HG*LG 26
           +T  G +F    N    LG
Sbjct: 436 VTNKGIVFGFGDNERAQLG 454



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
 Frame = -3

Query: 433 VQVTTGKYHTLMV-EDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPL-NVLVTQVSGS 260
           VQV  G  +T  V +DG++++ GSC    LGHG +  +            N+ V +VS  
Sbjct: 263 VQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAG 322

Query: 259 HNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVIL 80
             HA  +   G V+TWG       GHG+       P  + +LKG    QV      T +L
Sbjct: 323 DEHAVALDALGYVYTWGRGYCGALGHGDENDKT-SPELIGSLKGQVAVQVCARKRKTFVL 381

Query: 79  TRNGQI 62
           T  G +
Sbjct: 382 TDEGSV 387


>tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 371

 Score =  210 bits (534), Expect = 2e-52
 Identities = 97/144 (67%), Positives = 117/144 (81%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +RV  P    V  +S SHN
Sbjct: 105 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHN 164

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V +SGEVFT GDNSS CCGHGEVGR IF+P +VEALKGI CKQVATGLSFTVILTR
Sbjct: 165 HAAFVLESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTR 224

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
           +GQ++TC SN HG LG GDT++++
Sbjct: 225 DGQVYTCGSNTHGQLGHGDTIDRA 248



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
 Frame = -3

Query: 478 SSLCWGRN-------RNMLMEKV------QVTTG-KYHTLMVEDGSLYTCGSCICGVLGH 341
           SSLC G         R M +E +      QV TG  +  ++  DG +YTCGS   G LGH
Sbjct: 182 SSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGH 241

Query: 340 GAETTQCTSLTRVQLPLNVLVTQVSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVI 161
           G    + T         +  V Q++   ++   VT  G V ++G  +++C GHG+    +
Sbjct: 242 GDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDEL 301

Query: 160 FKPTRVEALK--GIFCKQVATGLSFTVILTRNGQIF 59
             P  +++ K   I   +V+ G    V L   G ++
Sbjct: 302 L-PRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVW 336


>ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
           gi|28564665|dbj|BAC57847.1| putative UVB-resistance
           protein UVR8 [Oryza sativa Japonica Group]
           gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa
           Japonica Group] gi|215678781|dbj|BAG95218.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  208 bits (529), Expect = 7e-52
 Identities = 95/144 (65%), Positives = 116/144 (80%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +RV  P    V  +S SHN
Sbjct: 106 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA VT+ GEVFT GDNSS CCGHGEVGR IF+PT ++ALKGI CKQVATGLSFTVILT 
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTT 225

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
           +GQ++TC SN HG LG GDT++++
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRA 249



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTG-KYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV TG  +  ++  DG +YTCGS   G LGHG    + T            V QV+   +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK--GIFCKQVATGLSFTVIL 80
           +   VT  G V+++G  +++C GHG+    + +P  +++ K   I   +V+ G    V L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
              G ++T      G LG GD  +K+
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKT 356


>gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  208 bits (529), Expect = 7e-52
 Identities = 95/144 (65%), Positives = 116/144 (80%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +RV  P    V  +S SHN
Sbjct: 106 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA VT+ GEVFT GDNSS CCGHGEVGR IF+PT ++ALKGI CKQVATGLSFTVILT 
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTT 225

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
           +GQ++TC SN HG LG GDT++++
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRA 249



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTG-KYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV TG  +  ++  DG +YTCGS   G LGHG    + T            V QV+   +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK--GIFCKQVATGLSFTVIL 80
           +   VT  G V+++G  +++C GHG+    + +P  +++ K   I   +V+ G    V L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
              G ++T      G LG GD  +K+
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKT 356


>gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  208 bits (529), Expect = 7e-52
 Identities = 95/144 (65%), Positives = 116/144 (80%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+V D S+Y+CGS +CGVLGHG +TTQC + +RV  P    V  +S SHN
Sbjct: 106 MQVATGRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHN 165

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA VT+ GEVFT GDNSS CCGHGEVGR IF+PT ++ALKGI CKQVATGLSFTVILT 
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTT 225

Query: 73  NGQIFTCRSN*HG*LGPGDTLEKS 2
           +GQ++TC SN HG LG GDT++++
Sbjct: 226 DGQVYTCGSNTHGQLGHGDTIDRA 249



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTG-KYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV TG  +  ++  DG +YTCGS   G LGHG    + T            V QV+   +
Sbjct: 212 QVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGAS 271

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK--GIFCKQVATGLSFTVIL 80
           +   VT  G V+++G  +++C GHG+    + +P  +++ K   I   +V+ G    V L
Sbjct: 272 YTFAVTDDGTVYSFGSCTNFCLGHGDQHDEL-RPRAIQSFKRRNIHVVRVSAGDEHAVAL 330

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
              G ++T      G LG GD  +K+
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKT 356


>ref|XP_002316910.2| regulator of chromosome condensation family protein [Populus
           trichocarpa] gi|550328218|gb|EEE97522.2| regulator of
           chromosome condensation family protein [Populus
           trichocarpa]
          Length = 492

 Score =  204 bits (518), Expect = 1e-50
 Identities = 93/143 (65%), Positives = 113/143 (79%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QVTTG+YHTL++ D S+Y+CGS +CGVLGHGAETTQC + TR++ P    V QVS SHN
Sbjct: 114 MQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHN 173

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V QSGEVFT GDNSS+CCGH +  R IF+P  VEALKG+ CKQVA GL+FTV LTR
Sbjct: 174 HAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTR 233

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            GQ++TC +N HG LG GDT ++
Sbjct: 234 QGQLYTCGTNTHGQLGHGDTQDR 256



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
 Frame = -3

Query: 478 SSLCWGRN-------RNMLMEKV------QVTTGKYHTL-MVEDGSLYTCGSCICGVLGH 341
           SS C G N       R  L+E +      QV  G   T+ +   G LYTCG+   G LGH
Sbjct: 191 SSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGH 250

Query: 340 GAETTQCTSLTRVQLPLNVLVTQVSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVI 161
           G    + T      L     V Q++   ++   VT +G V+++G  S+ C GHGE     
Sbjct: 251 GDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGE-QHDE 309

Query: 160 FKPTRVEAL--KGIFCKQVATGLSFTVILTRNGQIFTCRSN*HG*LGPGDTLEKS 2
           F+P  ++    K I    V+ G    V L  +G +++      G LG GD ++K+
Sbjct: 310 FRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKT 364


>ref|XP_002329104.1| predicted protein [Populus trichocarpa]
           gi|566154070|ref|XP_006370290.1| regulator of chromosome
           condensation family protein [Populus trichocarpa]
           gi|550349469|gb|ERP66859.1| regulator of chromosome
           condensation family protein [Populus trichocarpa]
          Length = 492

 Score =  203 bits (517), Expect = 2e-50
 Identities = 93/143 (65%), Positives = 113/143 (79%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QVTTG+YHTL++ D S+Y+CGS +CGVLGHGAETTQC + TR++ P    V QVS SHN
Sbjct: 114 MQVTTGRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHN 173

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V QSGEVFT GDNSS+CCGH +  R IF+P  VEALK + CKQV+ GL+FTV LTR
Sbjct: 174 HAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTR 233

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            GQ++TC SN HG LG GDTL++
Sbjct: 234 QGQLYTCGSNTHGQLGHGDTLDR 256



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV+ G   T+ +   G LYTCGS   G LGHG    + T      L     V Q++   +
Sbjct: 220 QVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPS 279

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVIL 80
           +   VT +G V+++G  S++C GHGE     F+P  ++    K I    V+ G    V L
Sbjct: 280 YVLAVTDNGVVYSFGYGSNFCLGHGE-QHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVAL 338

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
             +G +++      G LG GD ++K+
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKT 364


>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
           product [Vitis vinifera]
          Length = 492

 Score =  199 bits (505), Expect = 4e-49
 Identities = 90/143 (62%), Positives = 112/143 (78%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+TTG+YHTL+++D S+Y+CGS +CGVLGHG ETTQC + +R+  P    V QVS SHN
Sbjct: 114 MQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V QSGEVFT GDNSS+CCGHG+  R IF+P  VEALKG+ CKQVA GLSFTV LT 
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTM 233

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G ++TC +N HG LG GDT+++
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDR 256



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTGKYHTLMVE-DGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV  G   T+ +   G +YTCG+   G LGHG    + T      L     V Q++   +
Sbjct: 220 QVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPS 279

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVIL 80
           +A  VT  G V ++G  S++C GHGE    + +P  +++   K I   +++ G    V L
Sbjct: 280 YAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL-RPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
             +G ++T      G LG GD ++K+
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKT 364



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
 Frame = -3

Query: 454 RNMLMEKVQVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLV 278
           R   +  V+++ G  H + ++  G +YT G   CG LGHG E  + T      L  ++ V
Sbjct: 319 RRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAV 378

Query: 277 TQVSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVGRV--IFKPTRVEALKGIFCKQVAT 104
            QV        ++  +G V+ +G       G  + G    + +P  +++L+G +  Q++T
Sbjct: 379 -QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQIST 437

Query: 103 GLSFTVILTRNGQIFTCRSN*HG*LGPGDTL 11
           GL  TV +   GQIF    N    LG  DTL
Sbjct: 438 GLYHTVAVNNKGQIFGFGDNERAQLG-HDTL 467


>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  199 bits (505), Expect = 4e-49
 Identities = 90/143 (62%), Positives = 112/143 (78%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+TTG+YHTL+++D S+Y+CGS +CGVLGHG ETTQC + +R+  P    V QVS SHN
Sbjct: 114 MQITTGRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHN 173

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V QSGEVFT GDNSS+CCGHG+  R IF+P  VEALKG+ CKQVA GLSFTV LT 
Sbjct: 174 HAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTM 233

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G ++TC +N HG LG GDT+++
Sbjct: 234 KGHVYTCGTNTHGQLGHGDTVDR 256



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTGKYHTLMVE-DGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV  G   T+ +   G +YTCG+   G LGHG    + T      L     V Q++   +
Sbjct: 220 QVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPS 279

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVIL 80
           +A  VT  G V ++G  S++C GHGE    + +P  +++   K I   +++ G    V L
Sbjct: 280 YAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL-RPRAIQSFRRKTIHVVRISAGDEHVVAL 338

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
             +G ++T      G LG GD ++K+
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKT 364



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
 Frame = -3

Query: 454 RNMLMEKVQVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLV 278
           R   +  V+++ G  H + ++  G +YT G   CG LGHG E  + T      L  ++ V
Sbjct: 319 RRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAV 378

Query: 277 TQVSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVGRV--IFKPTRVEALKGIFCKQVAT 104
            QV        ++  +G V+ +G       G  + G    + +P  +++L+G +  Q++T
Sbjct: 379 -QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQIST 437

Query: 103 GLSFTVILTRNGQIFTCRSN*HG*LGPGDTL 11
           GL  TV +   GQIF    N    LG  DTL
Sbjct: 438 GLYHTVAVXNKGQIFGFGDNERAQLG-HDTL 467


>gb|EMJ13050.1| hypothetical protein PRUPE_ppa004744mg [Prunus persica]
          Length = 493

 Score =  196 bits (498), Expect = 3e-48
 Identities = 89/142 (62%), Positives = 110/142 (77%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+TTG+YHTL++ + SLY+CGS +CGVLG+G ET QC + TR+  P    V QVS SHN
Sbjct: 115 MQITTGRYHTLLISNSSLYSCGSSLCGVLGNGPETKQCVTFTRINFPSPAQVVQVSASHN 174

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V QSGEVFT GDNSS+CCGH +  R IF+P  VEALKG+ CKQVATGL+FTV LTR
Sbjct: 175 HAAFVMQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKGLPCKQVATGLNFTVFLTR 234

Query: 73  NGQIFTCRSN*HG*LGPGDTLE 8
            G ++TC +N HG LG GDT++
Sbjct: 235 QGHVYTCGANTHGQLGQGDTID 256



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNV-LVTQVSGSH 257
           QV TG   T+ +   G +YTCG+   G LG G +T    +   ++LP  +  + Q++   
Sbjct: 221 QVATGLNFTVFLTRQGHVYTCGANTHGQLGQG-DTIDSPAPKMIELPEGIGYIVQIAAGP 279

Query: 256 NHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVI 83
           ++   V  +G V+++G  S +C GHGE     F+P  ++    KGI   +V+ G    V 
Sbjct: 280 SYVLAVADNGVVYSFGSGSHFCLGHGE-QHDEFQPRAIQTFKRKGIHVVRVSAGDEHAVA 338

Query: 82  LTRNGQIFTCRSN*HG*LGPGDTLEKS 2
           L  +G ++T      G LG GD ++K+
Sbjct: 339 LDSSGYVYTWGKGYCGALGHGDEIDKT 365



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSH 257
           V+V+ G  H + ++  G +YT G   CG LGHG E  + T     +L           SH
Sbjct: 327 VRVSAGDEHAVALDSSGYVYTWGKGYCGALGHGDEIDKTTPELLNKLK----------SH 376

Query: 256 NHAALVTQSGEVFTWGDNSS-YCCGHGEVGRV----------IFKPTRVEALKGIFCKQV 110
               +  +  + F  GDN S Y CG    G +          I  P  +++L+     Q+
Sbjct: 377 LAVQVCARKRKTFVLGDNGSVYGCGWMGFGSLGFPDRGVSDKILSPRILDSLRAHHVSQI 436

Query: 109 ATGLSFTVILTRNGQIFTCRSN*HG*LGPGDTL 11
           +TGL  TV++T  G++F    N    LG  DTL
Sbjct: 437 STGLYHTVVVTNRGKLFGFGDNERAQLG-HDTL 468


>gb|EXB76306.1| hypothetical protein L484_025664 [Morus notabilis]
          Length = 492

 Score =  194 bits (494), Expect = 8e-48
 Identities = 88/143 (61%), Positives = 108/143 (75%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+TTGKYHT ++ + S+Y+CGS +CGVLGHG+ETTQC + +R+  P    V QVS SHN
Sbjct: 114 MQITTGKYHTFLISNSSVYSCGSSLCGVLGHGSETTQCVTFSRISFPSLAHVVQVSASHN 173

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V QSGEVFT GDNSS CCGH +  R IF+P  VEALKG+ CKQVA GL+FTV LTR
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHKDTSRPIFRPRLVEALKGVHCKQVAAGLNFTVFLTR 233

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G +FTC  N HG LG GD +++
Sbjct: 234 QGHVFTCGMNTHGQLGHGDAIDR 256



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV  G   T+ +   G ++TCG    G LGHG    + T      L     V Q+S   +
Sbjct: 220 QVAAGLNFTVFLTRQGHVFTCGMNTHGQLGHGDAIDRRTPKIIELLEGAGSVVQISAGPS 279

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVIL 80
           +   VT +GEV+++G  S++C GHGE  +  F+P  ++A   KGI   +V+ G    V L
Sbjct: 280 YVLAVTDNGEVYSFGSGSNFCLGHGE-QQAEFQPRIIQAFRRKGIHVVRVSAGDEHVVAL 338

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
             +G ++T      G LG GD ++K+
Sbjct: 339 DSSGCVYTWGKGYCGALGHGDEIDKT 364


>gb|EOY12878.1| Regulator of chromosome condensation (RCC1) family protein isoform
           2 [Theobroma cacao]
          Length = 393

 Score =  194 bits (494), Expect = 8e-48
 Identities = 88/143 (61%), Positives = 110/143 (76%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+TTG+YHTL++ + S+Y+CGS +CGVLGHG ETTQC + TR+  P    V QVS SHN
Sbjct: 115 MQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPPPANVMQVSASHN 174

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA + QSGEVFT GDNSS+CCGH +  R IF+P  VEA+KGI CKQVA GL+FTV LTR
Sbjct: 175 HAAFIMQSGEVFTCGDNSSFCCGHRDTSRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTR 234

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G ++TC +N HG LG GDT ++
Sbjct: 235 QGHLYTCGTNTHGQLGHGDTQDQ 257



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV  G   T+ +   G LYTCG+   G LGHG    Q T     QL     V Q++   +
Sbjct: 221 QVAAGLNFTVFLTRQGHLYTCGTNTHGQLGHGDTQDQPTPKMVEQLKGVGSVVQIAAGPS 280

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVIL 80
           +   VT +G V+++G  S++C GHGE     F+P  ++    KGI   +V+ G    V L
Sbjct: 281 YVLAVTDNGAVYSFGSGSNFCLGHGEQHNE-FQPRAIQTFKRKGIHILRVSAGDEHVVAL 339

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
             +G ++T      G LG GD ++K+
Sbjct: 340 DSSGYVYTWGKGYCGALGHGDEIDKT 365


>gb|EOY12877.1| Regulator of chromosome condensation (RCC1) family protein isoform
           1 [Theobroma cacao]
          Length = 493

 Score =  194 bits (494), Expect = 8e-48
 Identities = 88/143 (61%), Positives = 110/143 (76%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+TTG+YHTL++ + S+Y+CGS +CGVLGHG ETTQC + TR+  P    V QVS SHN
Sbjct: 115 MQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVAFTRINFPPPANVMQVSASHN 174

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA + QSGEVFT GDNSS+CCGH +  R IF+P  VEA+KGI CKQVA GL+FTV LTR
Sbjct: 175 HAAFIMQSGEVFTCGDNSSFCCGHRDTSRPIFRPRLVEAMKGIPCKQVAAGLNFTVFLTR 234

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G ++TC +N HG LG GDT ++
Sbjct: 235 QGHLYTCGTNTHGQLGHGDTQDQ 257



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV  G   T+ +   G LYTCG+   G LGHG    Q T     QL     V Q++   +
Sbjct: 221 QVAAGLNFTVFLTRQGHLYTCGTNTHGQLGHGDTQDQPTPKMVEQLKGVGSVVQIAAGPS 280

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVIL 80
           +   VT +G V+++G  S++C GHGE     F+P  ++    KGI   +V+ G    V L
Sbjct: 281 YVLAVTDNGAVYSFGSGSNFCLGHGEQHNE-FQPRAIQTFKRKGIHILRVSAGDEHVVAL 339

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
             +G ++T      G LG GD ++K+
Sbjct: 340 DSSGYVYTWGKGYCGALGHGDEIDKT 365


>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 497

 Score =  194 bits (494), Expect = 8e-48
 Identities = 87/143 (60%), Positives = 111/143 (77%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+TTG+YHTL++ + S+Y+CGS +CGVLGHG ETTQC S +R+  P    V QVS SHN
Sbjct: 114 MQITTGRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHN 173

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA + +SGEVFT GDNSS+CCGH +  R IF+P  VEALKG+ CKQVA GL+FTV LTR
Sbjct: 174 HAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTR 233

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G +++C +N HG LG GDTL++
Sbjct: 234 TGHVYSCGTNTHGQLGHGDTLDR 256



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           QV  G   T+ +   G +Y+CG+   G LGHG    + T            V Q++   +
Sbjct: 220 QVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPS 279

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVIL 80
           +   VT SG V+++G  S++C GHGE     F P  ++    K +   +V+ G    V L
Sbjct: 280 YVLAVTDSGVVYSFGSGSNFCLGHGEQHNE-FHPRAIQTFRRKNLHVVRVSAGDEHVVAL 338

Query: 79  TRNGQIFTCRSN*HG*LGPGDTLEKS 2
             +G ++T      G LG GD ++K+
Sbjct: 339 DSSGFVYTWGKGYCGALGHGDEIDKT 364


>ref|XP_006348235.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Solanum
           tuberosum]
          Length = 533

 Score =  193 bits (491), Expect = 2e-47
 Identities = 89/143 (62%), Positives = 107/143 (74%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +Q+ +G+YHTL++ D + Y+CGS +CGVLGHG ETTQC   TR+  P+ V V QVS SHN
Sbjct: 165 MQIRSGRYHTLLINDSAAYSCGSSLCGVLGHGPETTQCVEFTRISFPVPVQVAQVSASHN 224

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA VT SG+VFT GDNSSYCCGH + GR IF P  VEALK I  KQVA GLSFT+ LTR
Sbjct: 225 HAAFVTGSGQVFTCGDNSSYCCGHSDTGRPIFTPRMVEALKNIPVKQVAAGLSFTMFLTR 284

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G +FTC +N HG LG GDT ++
Sbjct: 285 KGHVFTCGTNGHGQLGHGDTSDR 307



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNV-LVTQVSGSH 257
           QV  G   T+ +   G ++TCG+   G LGHG +T+   + T ++L  ++  V Q++   
Sbjct: 271 QVAAGLSFTMFLTRKGHVFTCGTNGHGQLGHG-DTSDRPTPTCIELLASIGSVVQIAAGP 329

Query: 256 NHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALK--GIFCKQVATGLSFTVI 83
           ++A  V+  G ++++G  +++C GHGE    + +P  +++ K   I   +V+ G    V 
Sbjct: 330 SYALAVSDDGTLYSFGSGTNFCLGHGEQQNEL-QPRAIQSFKRRDINVARVSAGDEHVVA 388

Query: 82  LTRNGQIFTCRSN*HG*LGPGDTLEKS 2
           L   G ++T      G LG GD ++K+
Sbjct: 389 LDSTGYVYTWGKGYCGALGHGDEIDKT 415



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
 Frame = -3

Query: 430 QVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +V+ G  H + ++  G +YT G   CG LGHG E  + T      L  ++ V QV  S  
Sbjct: 378 RVSAGDEHVVALDSTGYVYTWGKGYCGALGHGDEIDKTTPSHLTSLKSHLAV-QVCASKR 436

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRV-------IFKPTRVEALKGIFCKQVATGLS 95
              ++   G V+ +G       G G +G +       + KP  +E+L+     Q++TGL 
Sbjct: 437 KTFVLVDDGSVYGFG-----WMGFGSLGFLDRGASDKVLKPRILESLRSHHISQISTGLY 491

Query: 94  FTVILTRNGQIFTCRSN*HG*LG 26
            +V++T  G++F    N    LG
Sbjct: 492 HSVVVTNCGRVFGFGDNERAQLG 514


>ref|XP_006827796.1| hypothetical protein AMTR_s00009p00266800 [Amborella trichopoda]
           gi|548832416|gb|ERM95212.1| hypothetical protein
           AMTR_s00009p00266800 [Amborella trichopoda]
          Length = 486

 Score =  192 bits (489), Expect = 3e-47
 Identities = 90/143 (62%), Positives = 110/143 (76%)
 Frame = -3

Query: 433 VQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +QV TG+YHTL+++  S+Y+CGS +CGVLGHG   TQC SL+R+  P    V  +SGSHN
Sbjct: 112 IQVITGRYHTLLLDGYSVYSCGSSLCGVLGHGTVVTQCVSLSRISFPCKSRVIHMSGSHN 171

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSFTVILTR 74
           HAA V QSGEVFT GDNSS CCGHGEV   IF+PT+V ALKGI CK+VATGL+FTV+LTR
Sbjct: 172 HAAFVMQSGEVFTCGDNSSICCGHGEVRNAIFRPTQVVALKGIPCKEVATGLNFTVVLTR 231

Query: 73  NGQIFTCRSN*HG*LGPGDTLEK 5
            G ++T  SN HG LG GD L++
Sbjct: 232 EGHVYTFGSNIHGQLGHGDILDR 254



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
 Frame = -3

Query: 475 SLCWGRNRNMLMEKVQVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQ 299
           +L W + RN+ +  ++V+ G  H + ++  G +YT G   CG LGHG E  + T      
Sbjct: 312 ALHWFKRRNVHI--LRVSAGDEHAVALDSSGYVYTWGKGYCGALGHGDENDKTTPELLTS 369

Query: 298 LPLNVLVTQVSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVG-------RVIFKPTRVE 140
           L  +  V QV        ++   G VF +G       G G +G         I KP  +E
Sbjct: 370 LRAHRAV-QVCARKRKTFVLLDDGSVFAFG-----WMGFGSLGFSDRSSSDKIMKPRVLE 423

Query: 139 ALKGIFCKQVATGLSFTVILTRNGQIFTCRSN*HG*LG 26
            L+G    Q++TGL  TV++T  G I     N    LG
Sbjct: 424 TLRGHHISQISTGLYHTVVVTNRGLILGFGDNERAQLG 461



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
 Frame = -3

Query: 478 SSLCWGRN--RNMLMEKVQVTTGK------------YHTLMVEDGSLYTCGSCICGVLGH 341
           SS+C G    RN +    QV   K            +  ++  +G +YT GS I G LGH
Sbjct: 189 SSICCGHGEVRNAIFRPTQVVALKGIPCKEVATGLNFTVVLTREGHVYTFGSNIHGQLGH 248

Query: 340 GAETTQCTSLTRVQLPLNVLVTQVSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVI 161
           G    + T            V QV+   ++   VT+ G ++++G  +++C GHG+    +
Sbjct: 249 GDILDRPTPKLIESFGNLGRVVQVAAGASYTLAVTEDGTLYSFGYGANFCLGHGDQHNEL 308

Query: 160 FKPTRVEALK--GIFCKQVATGLSFTVILTRNGQIFTCRSN*HG*LGPGDTLEKS 2
            +P  +   K   +   +V+ G    V L  +G ++T      G LG GD  +K+
Sbjct: 309 -QPRALHWFKRRNVHILRVSAGDEHAVALDSSGYVYTWGKGYCGALGHGDENDKT 362


>ref|XP_004244214.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Solanum lycopersicum]
          Length = 539

 Score =  192 bits (489), Expect = 3e-47
 Identities = 91/149 (61%), Positives = 111/149 (74%)
 Frame = -3

Query: 451 NMLMEKVQVTTGKYHTLMVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQ 272
           N+LM   Q+ +G+YHTL++ D + Y+CGS +CGVLGHG ETTQC   TR+  P+ V V Q
Sbjct: 164 NILM---QIRSGRYHTLLINDSAAYSCGSSLCGVLGHGPETTQCVEFTRISFPVPVQVAQ 220

Query: 271 VSGSHNHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEALKGIFCKQVATGLSF 92
           VS SHNHAA VT SG+VFT GDNSS+CCGH + GR IF+P  VEALK I  KQVA GLSF
Sbjct: 221 VSASHNHAAFVTGSGQVFTCGDNSSFCCGHRDTGRPIFRPRMVEALKNIPVKQVAAGLSF 280

Query: 91  TVILTRNGQIFTCRSN*HG*LGPGDTLEK 5
           T+ LTR G +FTC +N HG LG GDT ++
Sbjct: 281 TMFLTRKGHVFTCGTNGHGQLGHGDTSDR 309



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
 Frame = -3

Query: 430 QVTTGKYHTL-MVEDGSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNV-LVTQVSGSH 257
           QV  G   T+ +   G ++TCG+   G LGHG +T+   + T ++L  ++  V Q++   
Sbjct: 273 QVAAGLSFTMFLTRKGHVFTCGTNGHGQLGHG-DTSDRPTPTCIELLASIGSVVQIAAGP 331

Query: 256 NHAALVTQSGEVFTWGDNSSYCCGHGEVGRVIFKPTRVEAL--KGIFCKQVATGLSFTVI 83
           ++A  V+  G ++++G  +++C GHGE    + +P  +++   KGI   +V+ G    V 
Sbjct: 332 SYALAVSDDGTLYSFGSGTNFCLGHGEQQNEL-QPRAIQSFKRKGINVARVSAGDEHVVA 390

Query: 82  LTRNGQIFTCRSN*HG*LGPGDTLEKS 2
           L   G ++T      G LG GD  +K+
Sbjct: 391 LDSTGYVYTWGKGYCGALGHGDETDKT 417



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
 Frame = -3

Query: 430 QVTTGKYHTLMVED-GSLYTCGSCICGVLGHGAETTQCTSLTRVQLPLNVLVTQVSGSHN 254
           +V+ G  H + ++  G +YT G   CG LGHG ET + T      L  ++ V QV  S  
Sbjct: 380 RVSAGDEHVVALDSTGYVYTWGKGYCGALGHGDETDKTTPSHLTSLKSHLAV-QVCASKR 438

Query: 253 HAALVTQSGEVFTWGDNSSYCCGHGEVGRV-------IFKPTRVEALKGIFCKQVATGLS 95
              ++   G V+ +G       G G +G +       + KP  +E+L+     Q++TGL 
Sbjct: 439 KTFVLVDDGSVYGFG-----WMGFGSLGFLDRGASDKVLKPRILESLRSHHISQISTGLY 493

Query: 94  FTVILTRNGQIFTCRSN*HG*LG 26
            TV++T  G++F    N    LG
Sbjct: 494 HTVVVTNCGRVFGFGDNERAQLG 516


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