BLASTX nr result
ID: Ephedra25_contig00005208
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00005208
(447 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006843758.1| hypothetical protein AMTR_s00007p00236950 [A... 112 4e-23
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [... 111 9e-23
ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [S... 107 1e-21
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ... 105 6e-21
ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays] ... 103 2e-20
dbj|BAK07130.1| predicted protein [Hordeum vulgare subsp. vulgare] 103 2e-20
gb|ACL53653.1| unknown [Zea mays] 103 2e-20
gb|EMS48756.1| DNA mismatch repair protein MSH2 [Triticum urartu] 103 3e-20
gb|EEC78891.1| hypothetical protein OsI_19262 [Oryza sativa Indi... 102 7e-20
emb|CBI15412.3| unnamed protein product [Vitis vinifera] 100 3e-19
gb|EOY20929.1| MUTS isoform 2 [Theobroma cacao] 100 3e-19
ref|XP_003562321.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 99 8e-19
ref|XP_004299238.1| PREDICTED: DNA mismatch repair protein MSH2-... 98 1e-18
ref|XP_004962511.1| PREDICTED: DNA mismatch repair protein MSH2-... 97 2e-18
gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida] 97 2e-18
ref|XP_002317931.1| muts homolog 2 family protein [Populus trich... 97 2e-18
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu... 97 3e-18
gb|EMJ10274.1| hypothetical protein PRUPE_ppa000981mg [Prunus pe... 96 5e-18
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein MSH2-... 95 8e-18
ref|XP_006655161.1| PREDICTED: DNA mismatch repair protein MSH2-... 94 1e-17
>ref|XP_006843758.1| hypothetical protein AMTR_s00007p00236950 [Amborella trichopoda]
gi|548846126|gb|ERN05433.1| hypothetical protein
AMTR_s00007p00236950 [Amborella trichopoda]
Length = 941
Score = 112 bits (281), Expect = 4e-23
Identities = 56/94 (59%), Positives = 67/94 (71%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALAR KAAELEDFS + N ++VG KRK CSPDDV R +RA +FL DF+ LP
Sbjct: 848 VVALAREKAAELEDFSPTTASSNDTKEEVGAKRKHPCSPDDVTRGAARAHQFLRDFSQLP 907
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
L+ M+Y QALQEV KL+ LE DA D+ WL+Q F
Sbjct: 908 LEGMNYSQALQEVAKLRCSLEKDALDNPWLQQLF 941
>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
MSH2, putative [Ricinus communis]
Length = 936
Score = 111 bits (278), Expect = 9e-23
Identities = 57/94 (60%), Positives = 68/94 (72%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALAR KAAELEDFS + N +KVG KR C PDDV+R +RA KFL++F+ LP
Sbjct: 843 VVALAREKAAELEDFSPNAIVSNDTTEKVGSKRNRKCDPDDVSRGAARAHKFLKEFSDLP 902
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
L+ MD K+ALQ+V KLK GLE DAA+ WLKQ F
Sbjct: 903 LETMDLKEALQQVSKLKEGLEKDAANCQWLKQFF 936
>ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
gi|241926499|gb|EER99643.1| hypothetical protein
SORBIDRAFT_02g038230 [Sorghum bicolor]
Length = 942
Score = 107 bits (268), Expect = 1e-21
Identities = 53/94 (56%), Positives = 70/94 (74%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALA++KAAELEDFS+ + D+VG KRK + SPDDV R +RAR FLEDFA+LP
Sbjct: 849 VVALAKSKAAELEDFSTTPTFSDDSKDEVGSKRKRVFSPDDVTRGAARARLFLEDFAALP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
+D+MD + ++ V K+KS L+ DAAD+ WL+Q F
Sbjct: 909 VDEMDRSKIVEMVTKMKSDLQKDAADNPWLQQFF 942
>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
Length = 902
Score = 105 bits (262), Expect = 6e-21
Identities = 53/94 (56%), Positives = 68/94 (72%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VV LAR KAAELEDFS N +DKVG KRK SPDD++R +RA +FL++F+ LP
Sbjct: 809 VVTLAREKAAELEDFSPTEIVSNDASDKVGSKRKRESSPDDISRGAARAHQFLKEFSDLP 868
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
L++MD K+ALQ+V KLK+ LE DA + WL+Q F
Sbjct: 869 LEKMDLKEALQQVSKLKNDLEKDAVNCHWLQQFF 902
>ref|NP_001146301.1| DNA mismatch repair protein MSH2 [Zea mays]
gi|11386957|sp|Q9XGC9.1|MSH2_MAIZE RecName: Full=DNA
mismatch repair protein MSH2; AltName: Full=MUS1
gi|4775576|emb|CAB42554.1| MUS1 protein [Zea mays]
gi|414887420|tpg|DAA63434.1| TPA: DNA mismatch repair
protein MSH2 [Zea mays]
Length = 942
Score = 103 bits (257), Expect = 2e-20
Identities = 50/94 (53%), Positives = 69/94 (73%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALA++KAAELEDFS+ + D+VG KRK + SPDD+ R +RAR FLE+FA+LP
Sbjct: 849 VVALAKSKAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
+D+MD + L+ K+K+ L+ DAAD+ WL+Q F
Sbjct: 909 MDEMDGSKILEMATKMKADLQKDAADNPWLQQFF 942
>dbj|BAK07130.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 942
Score = 103 bits (257), Expect = 2e-20
Identities = 51/92 (55%), Positives = 66/92 (71%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
V+ALA++KA ELEDF+S +P+D+VG KRK + SPDDV R +RAR LEDFA+LP
Sbjct: 849 VIALAKSKAEELEDFTSAPNLSGEPSDEVGSKRKRVFSPDDVTRGAARARLLLEDFAALP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQ 278
LD++D +A + V KLKS E DAA + WL Q
Sbjct: 909 LDEVDGSKATEMVAKLKSDFEKDAASNPWLHQ 940
>gb|ACL53653.1| unknown [Zea mays]
Length = 618
Score = 103 bits (257), Expect = 2e-20
Identities = 50/94 (53%), Positives = 69/94 (73%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALA++KAAELEDFS+ + D+VG KRK + SPDD+ R +RAR FLE+FA+LP
Sbjct: 525 VVALAKSKAAELEDFSTTPTFSDDLKDEVGSKRKRVFSPDDITRGAARARLFLEEFAALP 584
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
+D+MD + L+ K+K+ L+ DAAD+ WL+Q F
Sbjct: 585 MDEMDGSKILEMATKMKADLQKDAADNPWLQQFF 618
>gb|EMS48756.1| DNA mismatch repair protein MSH2 [Triticum urartu]
Length = 1271
Score = 103 bits (256), Expect = 3e-20
Identities = 50/92 (54%), Positives = 67/92 (72%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
V+ALA++KA ELEDF+S +P+D+VG KRK + SPDDV R +RAR LEDF++LP
Sbjct: 1178 VIALAKSKAEELEDFTSAPNLSGEPSDEVGSKRKRVFSPDDVTRGAARARLLLEDFSALP 1237
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQ 278
LD++D +A + V KLKS E DAA + WL+Q
Sbjct: 1238 LDEVDGSKATEMVAKLKSDFEKDAASNPWLQQ 1269
>gb|EEC78891.1| hypothetical protein OsI_19262 [Oryza sativa Indica Group]
gi|222630934|gb|EEE63066.1| hypothetical protein
OsJ_17874 [Oryza sativa Japonica Group]
Length = 942
Score = 102 bits (253), Expect = 7e-20
Identities = 52/92 (56%), Positives = 65/92 (70%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALA++KA ELEDFS+ + D+VG KRK + SPDDV R +RAR LE+ ASLP
Sbjct: 849 VVALAKSKAEELEDFSTAPNFSDDSKDEVGSKRKRVFSPDDVTRGAARARLLLEELASLP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQ 278
LD+MD +A + V KLKS E DAAD+ WL+Q
Sbjct: 909 LDEMDGTKAAETVTKLKSDFEKDAADNPWLQQ 940
>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
Length = 945
Score = 100 bits (248), Expect = 3e-19
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADK---VGKKRKEICSPDDVARATSRARKFLEDFA 173
VV LAR KAAELEDFS N +DK VG KRK SPDD++R +RA +FL++F+
Sbjct: 849 VVTLAREKAAELEDFSPTEIVSNDASDKGLKVGSKRKRESSPDDISRGAARAHQFLKEFS 908
Query: 174 SLPLDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
LPL++MD K+ALQ+V KLK+ LE DA + WL+Q F
Sbjct: 909 DLPLEKMDLKEALQQVSKLKNDLEKDAVNCHWLQQFF 945
>gb|EOY20929.1| MUTS isoform 2 [Theobroma cacao]
Length = 942
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/92 (54%), Positives = 62/92 (67%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
V+ LAR KAAELEDFS S N + G KRK C P D++R ++A KFL+DFA LP
Sbjct: 849 VICLAREKAAELEDFSPTSIISNDARQEEGSKRKRECDPIDMSRGAAKAHKFLKDFADLP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQ 278
L+ MD KQALQ+V KL+ LE DA + WL+Q
Sbjct: 909 LESMDLKQALQQVNKLRGDLEKDAVNCNWLRQ 940
>ref|XP_003562321.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH2-like
[Brachypodium distachyon]
Length = 942
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/92 (52%), Positives = 67/92 (72%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
V+ALA++KA ELEDFS+ +++ D+VG KRK + SPDDV R +RAR LE+F++LP
Sbjct: 849 VIALAKSKAEELEDFSAAPNFNDESNDEVGSKRKRVFSPDDVTRGAARARVLLEEFSALP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQ 278
LD+MD ++A + V KLK E DAA + WL+Q
Sbjct: 909 LDEMDGRKATEVVTKLKLDFEKDAAGNPWLQQ 940
>ref|XP_004299238.1| PREDICTED: DNA mismatch repair protein MSH2-like [Fragaria vesca
subsp. vesca]
Length = 942
Score = 97.8 bits (242), Expect = 1e-18
Identities = 49/94 (52%), Positives = 66/94 (70%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VV+LAR KAAELEDFS + N P ++VG KRK DD++R + ARKFL++F+ +P
Sbjct: 849 VVSLAREKAAELEDFSPTAIIPNDPREEVGSKRKREYDSDDMSRGAALARKFLKEFSEMP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
LD MD +QALQ V K+K L+T+A + WL+Q F
Sbjct: 909 LDTMDVQQALQIVNKMKDDLQTEAVNSQWLQQFF 942
>ref|XP_004962511.1| PREDICTED: DNA mismatch repair protein MSH2-like [Setaria italica]
Length = 943
Score = 97.4 bits (241), Expect = 2e-18
Identities = 46/95 (48%), Positives = 67/95 (70%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
V+ALA++KAAELEDFS+ + D+VG KRK + SPDDV R +RA+ FLE+ A+LP
Sbjct: 849 VIALAKSKAAELEDFSTTPTFSDDSIDEVGSKRKRVFSPDDVTRGAARAQLFLEELAALP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTFK 287
+D+MD +A++ KLK ++ DAA + WL+Q +
Sbjct: 909 IDEMDQSKAMEMAAKLKVDMQKDAAGNPWLQQLLR 943
>gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 942
Score = 97.4 bits (241), Expect = 2e-18
Identities = 52/94 (55%), Positives = 67/94 (71%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VV LAR KA+ELEDFS + N +K KRK P+DV+R ++RAR+FLEDF +LP
Sbjct: 847 VVDLAREKASELEDFSPNAMILND-GEKAASKRKRNFDPNDVSRGSARARQFLEDFTNLP 905
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
LD+MD KQALQ++ K+K+ LE DA D WL+Q F
Sbjct: 906 LDKMDQKQALQQLSKMKTDLERDAVDCNWLQQFF 939
>ref|XP_002317931.1| muts homolog 2 family protein [Populus trichocarpa]
gi|222858604|gb|EEE96151.1| muts homolog 2 family protein
[Populus trichocarpa]
Length = 944
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/94 (52%), Positives = 65/94 (69%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VV LAR KAAELEDFS + + ++VG KRK C+ DD+++ +RA +FL+DF+ LP
Sbjct: 851 VVTLAREKAAELEDFSPTAIISDDAREEVGSKRKRECNMDDMSKGAARAHRFLKDFSDLP 910
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
LD MD KQAL ++ KLK LE DA + WL+Q F
Sbjct: 911 LDTMDLKQALLQIGKLKDDLEKDAVNCHWLQQFF 944
>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
gi|296034481|gb|ADG85112.1| mismatch repair protein
[Solanum lycopersicum]
Length = 943
Score = 96.7 bits (239), Expect = 3e-18
Identities = 50/94 (53%), Positives = 68/94 (72%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALAR KA+ELEDFS + N + V K+++E P DV+R T+RAR+FL+DF LP
Sbjct: 847 VVALAREKASELEDFSPRAMMPNDCKEVVSKRKREF-DPHDVSRGTARARQFLQDFTQLP 905
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
LD+MD KQALQ++ ++K+ LE +A D WL+Q F
Sbjct: 906 LDKMDLKQALQQLSQMKTDLEKNAVDSQWLQQFF 939
>gb|EMJ10274.1| hypothetical protein PRUPE_ppa000981mg [Prunus persica]
Length = 942
Score = 95.9 bits (237), Expect = 5e-18
Identities = 47/94 (50%), Positives = 69/94 (73%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VV+LAR KAAELEDFS+ + N ++VG KRK DD++R ++RA +FL++F++LP
Sbjct: 849 VVSLAREKAAELEDFSATAVIPNDAIEEVGSKRKREYDSDDMSRGSARAHEFLKEFSNLP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQTF 284
L+ MD K+ALQ+V K+K+ L+ DA + WL+Q F
Sbjct: 909 LETMDLKEALQKVSKMKNDLQKDAVNSHWLQQFF 942
>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein MSH2-like [Glycine max]
Length = 942
Score = 95.1 bits (235), Expect = 8e-18
Identities = 49/92 (53%), Positives = 62/92 (67%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VV LAR KAAELEDFS + N +VG KRK PDD+++ ++AR+FLE F +LP
Sbjct: 849 VVTLAREKAAELEDFSPSATSLNHTTQEVGSKRKRAFEPDDMSQGAAKARQFLEAFVALP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQ 278
L+ MD QALQEV+KL LE DA + WL+Q
Sbjct: 909 LETMDKMQALQEVKKLTDTLEKDAENCNWLQQ 940
>ref|XP_006655161.1| PREDICTED: DNA mismatch repair protein MSH2-like [Oryza brachyantha]
Length = 942
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = +3
Query: 3 VVALARAKAAELEDFSSVSEGHNQPADKVGKKRKEICSPDDVARATSRARKFLEDFASLP 182
VVALA++KA ELEDFS+ + D+VG KRK + SPDDV R +R R LE A+LP
Sbjct: 849 VVALAKSKAEELEDFSTAPNYSDDSKDEVGSKRKRVFSPDDVTRGAARVRLLLEGIATLP 908
Query: 183 LDQMDYKQALQEVRKLKSGLETDAADDTWLKQ 278
LD MD + + V KLKS E D+AD+ WL+Q
Sbjct: 909 LDDMDGTKVTETVAKLKSEFEKDSADNPWLQQ 940