BLASTX nr result
ID: Ephedra25_contig00005117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00005117
(731 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat... 118 2e-24
ref|XP_006850136.1| hypothetical protein AMTR_s00022p00232590 [A... 117 5e-24
ref|XP_003588474.1| Pentatricopeptide repeat-containing protein ... 117 5e-24
ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat... 116 9e-24
ref|XP_006344830.1| PREDICTED: pentatricopeptide repeat-containi... 113 6e-23
gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [The... 113 7e-23
gb|EXC30917.1| hypothetical protein L484_028099 [Morus notabilis] 112 1e-22
ref|XP_004233934.1| PREDICTED: pentatricopeptide repeat-containi... 112 1e-22
ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat... 112 2e-22
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 111 2e-22
ref|XP_001754449.1| predicted protein [Physcomitrella patens] gi... 111 2e-22
ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat... 111 3e-22
gb|EMJ21843.1| hypothetical protein PRUPE_ppa003463mg [Prunus pe... 110 4e-22
ref|XP_002882843.1| pentatricopeptide repeat-containing protein ... 110 5e-22
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr... 109 8e-22
ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containi... 109 1e-21
ref|NP_187990.1| pentatricopeptide repeat-containing protein [Ar... 109 1e-21
ref|XP_004308660.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 108 1e-21
ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selagin... 108 1e-21
>ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 118 bits (295), Expect = 2e-24
Identities = 59/145 (40%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Frame = -3
Query: 657 QGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYV 478
+G+++HT +IK+ YL YL+T + +Y K + DAR++FDEMP +V WTAMISAY
Sbjct: 108 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYS 167
Query: 477 RQGMLETALEVFKN--GAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDDVF 316
++G AL +F ++ PN T +L C + RQ+H+ AIK + +F
Sbjct: 168 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 227
Query: 315 LGSALVDLYAKEGEIHDAHLLFRCI 241
+GS+L+D+YAK G I DAH +F C+
Sbjct: 228 VGSSLLDMYAKSGRICDAHGVFHCL 252
Score = 84.3 bits (207), Expect = 4e-14
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
G + G+QIH++ IK Y ++ +++ MYAK G + DA VF +P V TA+IS
Sbjct: 206 GFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIIS 265
Query: 486 AYVRQGMLETALEVFK--NGAELRPNEVT----LTALLPLCNLDDARQVHAFAIKAGFHD 325
Y + G+ E AL++F+ + N VT LTAL L L+ +QVH+ +++G +
Sbjct: 266 GYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYS 325
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLF 250
V L ++L+D+Y+K G + A +F
Sbjct: 326 YVVLLNSLIDMYSKCGNVCYARRIF 350
Score = 69.7 bits (169), Expect = 9e-10
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+ GKQ+H+ +++SG L ++ MY+K G V AR++FD MP W AM+
Sbjct: 308 LNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 367
Query: 483 YVRQGMLETALEVFKNGAE---LRPNEVTLTALLPLCN---LDDARQVHAFAI---KAGF 331
Y + GM LE+FK E ++P+ +T A+L C+ L+D + + K G
Sbjct: 368 YSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGI 427
Query: 330 HDDVFLGSALVDLYAKEGEIHDA 262
D+ +VDL + G + +A
Sbjct: 428 EPDIGHYGCVVDLLGRAGRVEEA 450
>ref|XP_006850136.1| hypothetical protein AMTR_s00022p00232590 [Amborella trichopoda]
gi|548853734|gb|ERN11717.1| hypothetical protein
AMTR_s00022p00232590 [Amborella trichopoda]
Length = 321
Score = 117 bits (292), Expect = 5e-24
Identities = 60/144 (41%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+ GK++HT +IK+ Y YL T + Y K + DAR +F+ MP +V WTAMISA
Sbjct: 79 LNHGKRVHTHMIKTCYRPSVYLGTRLLIFYTKCDCLGDARLLFERMPERNVVSWTAMISA 138
Query: 483 YVRQGMLETALEVFKN--GAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
Y R+G AL +F GA+ +PNE T +L CN D +Q+H+ +K F
Sbjct: 139 YSRRGHSSEALSLFVKMLGADFQPNEFTFATVLTCCNGNFGFDHGKQIHSLLVKTHFKSH 198
Query: 321 VFLGSALVDLYAKEGEIHDAHLLF 250
+F+ S+L+D+YAK G+IHDA +F
Sbjct: 199 IFVSSSLLDMYAKAGKIHDARQVF 222
Score = 76.6 bits (187), Expect = 8e-12
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
G D GKQIH++++K+ + ++ +++ MYAK G + DARQVFD M + TA+I+
Sbjct: 179 GFDHGKQIHSLLVKTHFKSHIFVSSSLLDMYAKAGKIHDARQVFDGMKDRDIVSCTAIIA 238
Query: 486 AYVRQGMLETALEVFKNGAE--LRPNEVTLT----ALLPLCNLDDARQVHAFAIKAGFHD 325
Y + G+ E AL++F+ + +RPN VT T AL L L+ QVH + G +
Sbjct: 239 GYAQLGLDEEALKLFRQLQKEGMRPNYVTFTTVLMALSGLAALEYGEQVHGQRSRDGNEE 298
Query: 324 DV 319
++
Sbjct: 299 EL 300
>ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 668
Score = 117 bits (292), Expect = 5e-24
Identities = 63/149 (42%), Positives = 95/149 (63%), Gaps = 11/149 (7%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L QGK +HT ++ S + D +K +I +MYAK G++E ARQVFDEM V V WT+MI+
Sbjct: 107 LKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITG 166
Query: 483 YVRQGMLETA-------LEVFKNGAELRPNEVTLTALLPLC----NLDDARQVHAFAIKA 337
Y + G +A LE+ ++G LRPNE L++L+ C + D +Q+H K
Sbjct: 167 YSQDGYASSATTALVLFLEMVRDG--LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKY 224
Query: 336 GFHDDVFLGSALVDLYAKEGEIHDAHLLF 250
GF ++VF+GS+LVD+YA+ GE+ ++ L+F
Sbjct: 225 GFQENVFVGSSLVDMYARCGELRESRLVF 253
Score = 75.5 bits (184), Expect = 2e-11
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Frame = -3
Query: 729 EMRSRGVSPNEXXXXXXXXXLGL----DQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFG 562
EM G+ PNE G GKQIH K G+ ++ ++ +++ MYA+ G
Sbjct: 185 EMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCG 244
Query: 561 AVEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVF--KNGAELRPNEVTLTALL- 391
+ ++R VFDE+ + W A+IS + R+G E AL +F E T +ALL
Sbjct: 245 ELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLC 304
Query: 390 ---PLCNLDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLF 250
+L+ + +HA +K+G ++G+ L+ +YAK G I DA +F
Sbjct: 305 SSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVF 354
Score = 69.3 bits (168), Expect = 1e-09
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+QGK +H ++KSG Y+ + +MYAK G + DA++VFD + V +M+
Sbjct: 312 LEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIG 371
Query: 483 YVRQGMLETALEVFKN---GAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHD 325
Y + G+ + A+E+F+ E+ PN++T ++L C+ LD+ K G
Sbjct: 372 YAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEP 431
Query: 324 DVFLGSALVDLYAKEGEIHDA 262
+ + +VDL+ + G + A
Sbjct: 432 KLSHYTTVVDLFGRAGLLDQA 452
>ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 116 bits (290), Expect = 9e-24
Identities = 59/145 (40%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Frame = -3
Query: 657 QGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYV 478
+G+++HT +IK+ YL YL+T + +Y K + DAR +FDEMP +V WTAMISAY
Sbjct: 80 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYS 139
Query: 477 RQGMLETALEVFKN--GAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDDVF 316
++G AL +F ++ PN T +L C + RQ+H+ AIK + +F
Sbjct: 140 QRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMF 199
Query: 315 LGSALVDLYAKEGEIHDAHLLFRCI 241
+GS+L+D+YAK G I DAH +F C+
Sbjct: 200 VGSSLLDMYAKSGRICDAHGVFHCL 224
Score = 84.3 bits (207), Expect = 4e-14
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
G + G+QIH++ IK Y ++ +++ MYAK G + DA VF +P V TA+IS
Sbjct: 178 GFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIIS 237
Query: 486 AYVRQGMLETALEVFK--NGAELRPNEVT----LTALLPLCNLDDARQVHAFAIKAGFHD 325
Y + G+ E AL++F+ + N VT LTAL L L+ +QVH+ +++G +
Sbjct: 238 GYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYS 297
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLF 250
V L ++L+D+Y+K G + A +F
Sbjct: 298 YVVLLNSLIDMYSKCGNVCYARRIF 322
Score = 69.7 bits (169), Expect = 9e-10
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+ GKQ+H+ +++SG L ++ MY+K G V AR++FD MP W AM+
Sbjct: 280 LNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVG 339
Query: 483 YVRQGMLETALEVFKNGAE---LRPNEVTLTALLPLCN---LDDARQVHAFAI---KAGF 331
Y + GM LE+FK E ++P+ +T A+L C+ L+D + + K G
Sbjct: 340 YSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGI 399
Query: 330 HDDVFLGSALVDLYAKEGEIHDA 262
D+ +VDL + G + +A
Sbjct: 400 EPDIGHYGCVVDLLGRAGRVEEA 422
>ref|XP_006344830.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Solanum tuberosum]
Length = 721
Score = 113 bits (283), Expect = 6e-23
Identities = 62/171 (36%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Frame = -3
Query: 729 EMRSRGVSPNEXXXXXXXXXLG----LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFG 562
EM G++P+E L +GKQ+H ++K G+ Y+ TA+ MYAK G
Sbjct: 312 EMHYCGMNPSEYTLVGVLNACSDFDALREGKQVHGYLLKLGFEPQMYILTALVDMYAKCG 371
Query: 561 AVEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVFKN--GAELRPNEVTLTALLP 388
+ DAR+ FD + P + +WT+MI+ YV+ G E+A+ ++ + PNE+T+ ++L
Sbjct: 372 NISDARRGFDYLKEPDIVLWTSMIAGYVKNGDNESAMGMYCRMLMEGVIPNELTMASVLK 431
Query: 387 LCN----LDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLFR 247
C+ L+ +Q+HA +K GF+ +V +GSAL +YAK G +HD +L+FR
Sbjct: 432 ACSSLAALEQGKQIHAHIVKHGFNLEVPIGSALSTMYAKSGSLHDGNLVFR 482
Score = 91.3 bits (225), Expect = 3e-16
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYVR 475
GKQIH + +K+G+L + A MYAK G+++DA F+ + W+A+I+ Y +
Sbjct: 240 GKQIHCLSLKNGFLWAVSVANATVTMYAKCGSLDDACWAFELSSEKNSITWSALITGYAQ 299
Query: 474 QGMLETALEVFK--NGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDDVFL 313
G E AL++F + + P+E TL +L C+ L + +QVH + +K GF +++
Sbjct: 300 NGDCEKALKLFSEMHYCGMNPSEYTLVGVLNACSDFDALREGKQVHGYLLKLGFEPQMYI 359
Query: 312 GSALVDLYAKEGEIHDAHLLFRCIRQ 235
+ALVD+YAK G I DA F +++
Sbjct: 360 LTALVDMYAKCGNISDARRGFDYLKE 385
Score = 83.6 bits (205), Expect = 6e-14
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGA-VEDARQVFDEMPVPHVAVWTAMISAYV 478
GKQ H + K GYL D ++ +++ +Y K G + DAR++FDEMP + WT MIS Y
Sbjct: 137 GKQAHCLAFKLGYLSDVFVGSSLLNVYCKAGHYLGDARKMFDEMPERNSVSWTTMISGYA 196
Query: 477 RQGMLETALEVF-----KNGAELRPNEVTLTALLPLCNLDD----ARQVHAFAIKAGFHD 325
Q M++ A+ VF + G ++ NE T++L L + +Q+H ++K GF
Sbjct: 197 LQRMVKEAVGVFSVMLWERGEDV--NEFVFTSVLSAIALPEFVYVGKQIHCLSLKNGFLW 254
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG-------NKSLRG*YG 166
V + +A V +YAK G + DA F I W+ ++ G K+L+
Sbjct: 255 AVSVANATVTMYAKCGSLDDACWAFEL--SSEKNSITWSALITGYAQNGDCEKALK---- 308
Query: 165 CSCFEECKYC 136
F E YC
Sbjct: 309 --LFSEMHYC 316
Score = 67.8 bits (164), Expect = 4e-09
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Frame = -3
Query: 726 MRSRGVSPNEXXXXXXXXXLG----LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGA 559
M GV PNE L+QGKQIH I+K G+ + + +A+ MYAK G+
Sbjct: 414 MLMEGVIPNELTMASVLKACSSLAALEQGKQIHAHIVKHGFNLEVPIGSALSTMYAKSGS 473
Query: 558 VEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVFKNGAE--LRPNEVTLTALLPL 385
+ D VF MP + W +M+S + G ALE+F+ RP+ VT +L
Sbjct: 474 LHDGNLVFRRMPARDLVSWNSMMSGLSQNGCGTEALELFEEMLHEGTRPDYVTFVNILSA 533
Query: 384 CNLDDARQVHAFAIKAGFHDDVFLG------------SALVDLYAKEGEIHDA 262
C+ H +K G+ + + +VD++ + GE+++A
Sbjct: 534 CS-------HMGLVKRGWSIFKMMSDEFGIEPRLEHFACMVDMFGRAGELYEA 579
>gb|EOY09401.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 718
Score = 113 bits (282), Expect = 7e-23
Identities = 56/145 (38%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Frame = -3
Query: 657 QGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYV 478
+G+++H +IK+ YL YL+T + Y K + +AR V DEMP +V WTAMISAY
Sbjct: 28 EGQRVHAHMIKTRYLPPVYLRTRLIIFYGKCDCLREARHVLDEMPERNVVSWTAMISAYS 87
Query: 477 RQGMLETALEVFKN--GAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDDVF 316
++G+ AL +F ++ PNE T +L C + RQ+H+F IK ++
Sbjct: 88 QRGLASEALNLFVQMLRSDTEPNEFTFATVLTSCTGTFGFELGRQIHSFVIKRTLDTHIY 147
Query: 315 LGSALVDLYAKEGEIHDAHLLFRCI 241
+GS+L+D+YAK G IH+A +F C+
Sbjct: 148 VGSSLLDMYAKAGRIHEAREIFNCL 172
Score = 78.2 bits (191), Expect = 3e-12
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
G + G+QIH+ +IK Y+ +++ MYAK G + +AR++F+ +P V TA+IS
Sbjct: 126 GFELGRQIHSFVIKRTLDTHIYVGSSLLDMYAKAGRIHEAREIFNCLPERDVVSCTAIIS 185
Query: 486 AYVRQGMLETALEVFK--NGAELRPNEVT----LTALLPLCNLDDARQVHAFAIKAGFHD 325
Y + G+ ALE+F+ N + N VT LTAL L LD +QVH ++
Sbjct: 186 GYAQLGLDADALELFRRLNLEGMSANYVTYASVLTALSGLAALDLGKQVHNHVLRCQLPF 245
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLF 250
V L ++L+D+Y+K G + + +F
Sbjct: 246 YVVLQNSLIDMYSKCGNLIYSRRIF 270
Score = 62.4 bits (150), Expect = 1e-07
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
LD GKQ+H +++ L+ ++ MY+K G + +R++FD MP V W AM+
Sbjct: 228 LDLGKQVHNHVLRCQLPFYVVLQNSLIDMYSKCGNLIYSRRIFDNMPERTVISWNAMLVG 287
Query: 483 YVRQGMLETALEVF---KNGAELRPNEVTLTALLPLCNLDDARQVHAFAI------KAGF 331
Y + GM +E++ +N +++P+ VTL +L C+ V K G
Sbjct: 288 YSKHGMGREVVELYRLMRNENKVKPDSVTLLGVLSGCSHGGMEDVGLQIFDEMVNGKDGV 347
Query: 330 HDDVFLGSALVDLYAKEGEIHDA 262
D+ +VDL + G + +A
Sbjct: 348 EPDIEHYGCVVDLLGRAGRVEEA 370
>gb|EXC30917.1| hypothetical protein L484_028099 [Morus notabilis]
Length = 706
Score = 112 bits (281), Expect = 1e-22
Identities = 60/148 (40%), Positives = 89/148 (60%), Gaps = 9/148 (6%)
Frame = -3
Query: 657 QGKQIHTMIIKSGYLQDH-YLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAY 481
+G+ +H +IK+ Y YL T + +YAK ++DAR+V DEM + +V WTAMIS Y
Sbjct: 28 EGQTVHAHMIKTCYFPSLVYLSTRLIVLYAKCDCLDDARKVLDEMTLRNVVSWTAMISVY 87
Query: 480 VRQGMLETALEVF----KNGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHD 325
++G AL +F ++G E PNE T +L C L+ RQ+H+F +K F
Sbjct: 88 SQKGYASEALNLFVQMLRSGTE--PNEFTFATVLTSCTCSSGLELGRQIHSFVLKTSFES 145
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLFRCI 241
+F+GS+L+D+YAK G IHDA +F C+
Sbjct: 146 HMFVGSSLLDMYAKAGRIHDARQVFTCL 173
Score = 90.5 bits (223), Expect = 5e-16
Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Frame = -3
Query: 729 EMRSRGVSPNEXXXXXXXXXL----GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFG 562
+M G PNE GL+ G+QIH+ ++K+ + ++ +++ MYAK G
Sbjct: 102 QMLRSGTEPNEFTFATVLTSCTCSSGLELGRQIHSFVLKTSFESHMFVGSSLLDMYAKAG 161
Query: 561 AVEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVFKN--GAELRPNEVT----LT 400
+ DARQVF +P V TA+IS Y + G E ALE+F+ + PN VT LT
Sbjct: 162 RIHDARQVFTCLPERDVVSCTAIISGYAQLGFDEEALELFRQLLREGMVPNHVTYASLLT 221
Query: 399 ALLPLCNLDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLF 250
AL L LD RQVH+ +++ + L ++L+D+Y+K G + + +F
Sbjct: 222 ALSGLAALDLGRQVHSHVLRSKVPTFIVLQNSLIDMYSKCGNLAYSRRVF 271
>ref|XP_004233934.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Solanum lycopersicum]
Length = 721
Score = 112 bits (281), Expect = 1e-22
Identities = 62/171 (36%), Positives = 99/171 (57%), Gaps = 10/171 (5%)
Frame = -3
Query: 729 EMRSRGVSPNEXXXXXXXXXLG----LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFG 562
EM RG+ P+E L +GKQ+H ++K G+ Y+ TA+ MYAK G
Sbjct: 312 EMHYRGMIPSEYTLVGVLNACSDFDALREGKQVHGYLVKLGFEPQMYILTALVDMYAKCG 371
Query: 561 AVEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVFKN--GAELRPNEVTLTALLP 388
+ DAR+ F+ + P + +WT+MI+ YV+ G E+A ++ + PNE+T+ ++L
Sbjct: 372 NISDARRGFEYLKEPDIVLWTSMIAGYVKNGDNESAKGMYCRMLMEGVMPNELTMASVLK 431
Query: 387 LCN----LDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLFR 247
C+ L+ +Q+HA +K GF +V +GSAL +YAK G +HD +L+FR
Sbjct: 432 ACSSLAALEQGKQIHAHIVKHGFSLEVPIGSALSTMYAKSGSLHDGNLVFR 482
Score = 92.8 bits (229), Expect = 1e-16
Identities = 58/174 (33%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYVR 475
GKQIH + +K+G+L + A MYAK G ++DA + F+ + W+A+I+ Y +
Sbjct: 240 GKQIHCLSLKNGFLSAVSVANATVTMYAKCGRLDDACRAFELSSEKNSITWSALITGYAQ 299
Query: 474 QGMLETALEVFK--NGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDDVFL 313
G E AL++F + + P+E TL +L C+ L + +QVH + +K GF +++
Sbjct: 300 NGDCEKALKLFSEMHYRGMIPSEYTLVGVLNACSDFDALREGKQVHGYLVKLGFEPQMYI 359
Query: 312 GSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG------NKSLRG*Y 169
+ALVD+YAK G I DA F +++ + WT ++ G N+S +G Y
Sbjct: 360 LTALVDMYAKCGNISDARRGFEYLKE--PDIVLWTSMIAGYVKNGDNESAKGMY 411
Score = 80.9 bits (198), Expect = 4e-13
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGA-VEDARQVFDEMPVPHVAVWTAMISAYV 478
GKQ H + K GYL D ++ +++ +Y K G + DAR +FDEMP + T MIS Y
Sbjct: 137 GKQAHCLAFKLGYLSDVFVGSSLLNVYCKAGHHLGDARNMFDEMPERNSVSCTTMISGYA 196
Query: 477 RQGMLETALEVF-----KNGAELRPNEVTLTALLPLCNLDD----ARQVHAFAIKAGFHD 325
Q M++ A+ VF K G ++ NE T++L L + +Q+H ++K GF
Sbjct: 197 LQRMVKEAVGVFSVMLLKRGEDV--NEFVFTSVLSAIALPEFVYVGKQIHCLSLKNGFLS 254
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG 193
V + +A V +YAK G + DA F I W+ ++ G
Sbjct: 255 AVSVANATVTMYAKCGRLDDACRAFEL--SSEKNSITWSALITG 296
Score = 67.8 bits (164), Expect = 4e-09
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDH-YLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
L +G+ +H+ +IK+G Y+ +I +YAK + DA F E+ V W ++I+
Sbjct: 29 LPKGQSLHSHLIKTGSSSSCIYIANSIVNLYAKCHRLSDAHLAFQEIQTKDVVSWNSLIN 88
Query: 486 AYVRQGMLET---ALEVFK--NGAELRPNEVTLTALLP-LCNLDDA---RQVHAFAIKAG 334
Y + G ++ AL +FK PN T + L L D+ +Q H A K G
Sbjct: 89 GYSQLGRRDSSLSALNLFKLMRQENTLPNPHTFAGIFTSLSTLGDSFTGKQAHCLAFKLG 148
Query: 333 FHDDVFLGSALVDLYAKEG-EIHDAHLLF 250
+ DVF+GS+L+++Y K G + DA +F
Sbjct: 149 YLSDVFVGSSLLNVYCKAGHHLGDARNMF 177
Score = 65.5 bits (158), Expect = 2e-08
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Frame = -3
Query: 726 MRSRGVSPNEXXXXXXXXXLG----LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGA 559
M GV PNE L+QGKQIH I+K G+ + + +A+ MYAK G+
Sbjct: 414 MLMEGVMPNELTMASVLKACSSLAALEQGKQIHAHIVKHGFSLEVPIGSALSTMYAKSGS 473
Query: 558 VEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVFKNGAE--LRPNEVTLTALLPL 385
+ D VF MP + W +M+S + G ALE+F+ RP+ VT +L
Sbjct: 474 LHDGNLVFRRMPARDLVSWNSMMSGLSQNGCGTEALELFEEMLHEGTRPDYVTFVNILSA 533
Query: 384 CNLDDARQVHAFAIKAGFH-----DDVF-------LGSALVDLYAKEGEIHDA 262
C+ H +K G+ D F + +VD+ + GE++ A
Sbjct: 534 CS-------HMGLVKRGWSIFRMMSDEFGIEPRLEHFACMVDMLGRAGELYKA 579
>ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like isoform X1 [Glycine max]
gi|571440626|ref|XP_006575216.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At3g13770,
mitochondrial-like isoform X2 [Glycine max]
Length = 634
Score = 112 bits (279), Expect = 2e-22
Identities = 59/147 (40%), Positives = 90/147 (61%), Gaps = 8/147 (5%)
Frame = -3
Query: 657 QGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYV 478
+G+++H +IK+ YL YL+T + Y K ++ DAR VFD MP +V WTAMISAY
Sbjct: 76 EGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYS 135
Query: 477 RQGMLETALEVF----KNGAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDD 322
++G AL +F ++G E PNE T +L C RQ+H+ IK +
Sbjct: 136 QRGYASQALSLFVQMLRSGTE--PNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAH 193
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCI 241
V++GS+L+D+YAK+G+IH+A +F+C+
Sbjct: 194 VYVGSSLLDMYAKDGKIHEARGIFQCL 220
Score = 84.0 bits (206), Expect = 5e-14
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 10/189 (5%)
Frame = -3
Query: 729 EMRSRGVSPNEXXXXXXXXXL----GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFG 562
+M G PNE G G+QIH+ IIK Y Y+ +++ MYAK G
Sbjct: 149 QMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDG 208
Query: 561 AVEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVFK--NGAELRPNEVT----LT 400
+ +AR +F +P V TA+IS Y + G+ E ALE+F+ ++ N VT LT
Sbjct: 209 KIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLT 268
Query: 399 ALLPLCNLDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRG 220
AL L LD +QVH +++ V L ++L+D+Y+K G + A +F + +
Sbjct: 269 ALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHE--RTV 326
Query: 219 IPWT*ILFG 193
I W +L G
Sbjct: 327 ISWNAMLVG 335
>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 111 bits (278), Expect = 2e-22
Identities = 60/145 (41%), Positives = 91/145 (62%), Gaps = 6/145 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L++GKQIH +K+GY Y TA+ MYAK G++ DAR+ FD + P + +WT+MIS
Sbjct: 331 LEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISG 390
Query: 483 YVRQGMLETALEVF--KNGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
Y + G ETAL ++ + P+E+T+ ++L C+ L+ +Q+HA IK GF +
Sbjct: 391 YAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLE 450
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFR 247
V +GSAL +YAK G + D +L+FR
Sbjct: 451 VPIGSALSTMYAKCGSLEDGNLVFR 475
Score = 85.1 bits (209), Expect = 2e-14
Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYVR 475
GKQIH + +K+G L + A+ MY K G ++DA + F+ W+AMI+ Y +
Sbjct: 233 GKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQ 292
Query: 474 QGMLETALEVFKNG--AELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDDVFL 313
G AL +F N +P+E T ++ C+ L++ +Q+H +++KAG+ ++
Sbjct: 293 AGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYF 352
Query: 312 GSALVDLYAKEGEIHDAHLLFRCIRQ 235
+ALVD+YAK G + DA F +++
Sbjct: 353 MTALVDMYAKCGSLVDARKGFDYLKE 378
Score = 72.8 bits (177), Expect = 1e-10
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L +GK IH ++++G YL ++ +YAK G++ A+ VF+ + V W +I+
Sbjct: 26 LQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLING 85
Query: 483 YVRQGML--ETALEVFK--NGAELRPNEVTLTALLPLCNLD----DARQVHAFAIKAGFH 328
Y ++G + +E+F+ PN T + + + Q HA AIK
Sbjct: 86 YSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNF 145
Query: 327 DDVFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG 193
DVF+GS+L+++Y K G + DA +F I + + W I+ G
Sbjct: 146 YDVFVGSSLINMYCKIGCMLDARKVFDTIPE--RNTVSWATIISG 188
Score = 72.0 bits (175), Expect = 2e-10
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYVR 475
G Q H + IK+ D ++ +++ MY K G + DAR+VFD +P + W +IS Y
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191
Query: 474 QGMLETALEVF--KNGAELRPNEVTLTALLPLCNLDD----ARQVHAFAIKAGFHDDVFL 313
+ M A E+F E ++ T++L + D +Q+H A+K G +
Sbjct: 192 ERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASV 251
Query: 312 GSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG 193
G+ALV +Y K G + DA F G I W+ ++ G
Sbjct: 252 GNALVTMYGKCGCLDDALKTFEL--SGDKDDITWSAMITG 289
Score = 66.2 bits (160), Expect = 1e-08
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+QGKQIH IK G+ + + +A+ MYAK G++ED VF MP + W AMIS
Sbjct: 432 LEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISG 491
Query: 483 YVRQGMLETALEVFK--NGAELRPNEVTLTALLPLCN---LDDARQVH--AFAIKAGFHD 325
+ G ALE+F+ +P+ VT +L C+ L + +V+ + G
Sbjct: 492 LSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVP 551
Query: 324 DVFLGSALVDLYAKEGEIHD 265
V + +VD+ ++ G++H+
Sbjct: 552 RVEHYACMVDILSRAGKLHE 571
>ref|XP_001754449.1| predicted protein [Physcomitrella patens]
gi|162694551|gb|EDQ80899.1| predicted protein
[Physcomitrella patens]
Length = 723
Score = 111 bits (278), Expect = 2e-22
Identities = 60/188 (31%), Positives = 109/188 (57%), Gaps = 6/188 (3%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+ GK++H II+SGY ++ ++ ++ MY K G +E+AR++F ++P V WTAM++
Sbjct: 265 LEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTG 324
Query: 483 YVRQGMLETALEVFKNGAE--LRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
Y + G + A+ +F+ + ++P+++T T++L C+ L + +++H + AG++ D
Sbjct: 325 YAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLD 384
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFGNKSLRG*YGCSCFEECK 142
V+L SALV +YAK G + DA L+F + + WT I+ G C+ C+
Sbjct: 385 VYLQSALVSMYAKCGSMDDASLVFN--QMSERNVVAWTAIITG--------CCAQHGRCR 434
Query: 141 YCFEHFFQ 118
E+F Q
Sbjct: 435 EALEYFDQ 442
Score = 92.8 bits (229), Expect = 1e-16
Identities = 45/144 (31%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L G+++H I+++G + + T++ MYAK G + AR +FD +P +V WT +I+
Sbjct: 164 LQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAG 223
Query: 483 YVRQGMLETALEVFK--NGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
Y +QG ++ ALE+ + AE+ PN++T ++L C L+ ++VH + I++G+ +
Sbjct: 224 YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283
Query: 321 VFLGSALVDLYAKEGEIHDAHLLF 250
+++ ++L+ +Y K G + +A LF
Sbjct: 284 LWVVNSLITMYCKCGGLEEARKLF 307
Score = 88.6 bits (218), Expect = 2e-15
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+QG+++H I+KSG + YL+ + MYAK G++ DAR+VFD + ++ WTAMI A
Sbjct: 63 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEA 122
Query: 483 YVRQGMLETALEVFKNG--AELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
+V A + ++ A +P++VT +LL L ++VH ++AG +
Sbjct: 123 FVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELE 182
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG 193
+G++LV +YAK G+I A ++F R + WT ++ G
Sbjct: 183 PRVGTSLVGMYAKCGDISKARVIFD--RLPEKNVVTWTLLIAG 223
>ref|XP_004965888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Setaria italica]
Length = 608
Score = 111 bits (277), Expect = 3e-22
Identities = 61/146 (41%), Positives = 87/146 (59%), Gaps = 8/146 (5%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L +G+Q+H ++ +GY YL T + MYA+ GA+EDAR V D MP +V WTAMIS
Sbjct: 51 LREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISG 110
Query: 483 YVRQGMLETALEVF----KNGAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFH 328
Y + A+E+F + G E PNE TL ++L C + +QVHAFA+K F
Sbjct: 111 YSQNERPAEAMELFVMMLRAGCE--PNEFTLASVLTSCTGSQGIHQVKQVHAFAVKTNFE 168
Query: 327 DDVFLGSALVDLYAKEGEIHDAHLLF 250
+F+GSAL+D+YAK + +A +F
Sbjct: 169 LHMFVGSALLDMYAKSENVQEARRVF 194
Score = 87.4 bits (215), Expect = 4e-15
Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 6/164 (3%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
G+ Q KQ+H +K+ + ++ +A+ MYAK V++AR+VFD +P V +TA+IS
Sbjct: 151 GIHQVKQVHAFAVKTNFELHMFVGSALLDMYAKSENVQEARRVFDMLPARDVVSYTAIIS 210
Query: 486 AYVRQGMLETALEVFKN--GAELRPNEVTLTALL----PLCNLDDARQVHAFAIKAGFHD 325
Y + G+ E AL++F+ ++ NEVT TALL L +LD +QVH ++
Sbjct: 211 GYTQLGLDEEALDLFRQLYNEGMQCNEVTFTALLNALSGLASLDYGKQVHGLILRKELPF 270
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG 193
+ L ++L+D+Y+K G++ + +F + + W IL G
Sbjct: 271 FMVLQNSLIDMYSKCGKLLYSRRVFN--NMPKRSVVSWNAILMG 312
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
LD GKQ+H +I++ L+ ++ MY+K G + +R+VF+ MP V W A++
Sbjct: 253 LDYGKQVHGLILRKELPFFMVLQNSLIDMYSKCGKLLYSRRVFNNMPKRSVVSWNAILMG 312
Query: 483 YVRQGMLETALEVFKN-GAELRPNEVTLTALL 391
Y R G+ ++F++ E++P+ VTL A+L
Sbjct: 313 YGRHGLAHEVAQLFRSMREEVKPDSVTLLAVL 344
>gb|EMJ21843.1| hypothetical protein PRUPE_ppa003463mg [Prunus persica]
Length = 572
Score = 110 bits (276), Expect = 4e-22
Identities = 65/181 (35%), Positives = 104/181 (57%), Gaps = 7/181 (3%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L++GKQ+H+ +K G+ Y+ TA+ MYAK G V DAR+ FD + P + +WT+MI
Sbjct: 207 LEEGKQVHSYSLKLGFEFQIYIMTALVDMYAKCGNVSDARKGFDYLREPDIVLWTSMIGG 266
Query: 483 YVRQGMLETALEVF--KNGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
YV+ G E +L ++ + PNE+T+ ++L C+ + RQ+HA IK GF +
Sbjct: 267 YVQNGENEASLTLYCRMQREGMMPNELTMASVLKACSSLSAFEQGRQIHARTIKYGFSLE 326
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG-NKSLRG*YGCSCFEEC 145
V +GSAL +YAK G + D +++FR R + W ++ G +++ RG FEE
Sbjct: 327 VPIGSALSTMYAKCGNLEDGNMVFR--RMPMRDTVSWNAMISGLSQNGRGTEALELFEEM 384
Query: 144 K 142
+
Sbjct: 385 R 385
Score = 90.9 bits (224), Expect = 4e-16
Identities = 47/146 (32%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYVR 475
GKQIH + +K G + ++ A+ MYAK G+++DA + F + W+AMI+ + +
Sbjct: 109 GKQIHCLAVKIGLISFVSVENALVTMYAKCGSLDDALRTFKTSGDKNSITWSAMITGFAQ 168
Query: 474 QGMLETALEVFK--NGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDDVFL 313
G + AL++F + + + P+E T ++ C+ L++ +QVH++++K GF +++
Sbjct: 169 SGDSQKALDLFSHMHFSGVMPSEFTFVGVINACSDIGALEEGKQVHSYSLKLGFEFQIYI 228
Query: 312 GSALVDLYAKEGEIHDAHLLFRCIRQ 235
+ALVD+YAK G + DA F +R+
Sbjct: 229 MTALVDMYAKCGNVSDARKGFDYLRE 254
>ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328683|gb|EFH59102.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 627
Score = 110 bits (275), Expect = 5e-22
Identities = 57/147 (38%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L +G+++H +IK+ YL YL+T + Y K +EDAR+V DEMP +V WTAMIS
Sbjct: 67 LREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 126
Query: 483 YVRQGMLETALEVFKN--GAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDD 322
Y + G AL VF ++ +PNE T +L C L +Q+H +K +
Sbjct: 127 YSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSH 186
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCI 241
+F+GS+L+D+YAK G+I +A +F C+
Sbjct: 187 IFVGSSLLDMYAKAGQIEEAREIFECL 213
Score = 89.4 bits (220), Expect = 1e-15
Identities = 54/145 (37%), Positives = 83/145 (57%), Gaps = 6/145 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
GL GKQIH +I+K Y ++ +++ MYAK G +E+AR++F+ +P V TA+I+
Sbjct: 167 GLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIA 226
Query: 486 AYVRQGMLETALEVFK--NGAELRPNEVT----LTALLPLCNLDDARQVHAFAIKAGFHD 325
Y + G+ E ALE+F+ +RPN VT LTAL L LD +Q H ++
Sbjct: 227 GYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 286
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLF 250
L ++L+D+Y+K G + A LF
Sbjct: 287 YAVLQNSLIDMYSKCGNLSYAQRLF 311
Score = 57.8 bits (138), Expect = 4e-06
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
LD GKQ H +++ L+ ++ MY+K G + A+++FD MP W AM+
Sbjct: 269 LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVG 328
Query: 483 YVRQGMLETALEVF---KNGAELRPNEVTLTALLPLCN----LDDARQVH--AFAIKAGF 331
Y + G+ LE+F ++ ++P+ VTL A+L C+ D ++ A + G
Sbjct: 329 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGI 388
Query: 330 HDDVFLGSALVDLYAKEGEIHDA 262
D +VD+ + G I +A
Sbjct: 389 KPDTEHYGCIVDMLGRAGRIDEA 411
>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 109 bits (273), Expect = 8e-22
Identities = 59/188 (31%), Positives = 107/188 (56%), Gaps = 6/188 (3%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+ GK++H II+SGY ++ ++ A+ MY K G +++AR++F ++P V WTAM++
Sbjct: 314 LEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTG 373
Query: 483 YVRQGMLETALEVFKNGAE--LRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
Y + G + A+++F+ + ++P+++T T+ L C+ L + + +H + AG+ D
Sbjct: 374 YAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLD 433
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFGNKSLRG*YGCSCFEECK 142
V+L SALV +YAK G + DA L+F + + WT ++ GC+ C+
Sbjct: 434 VYLQSALVSMYAKCGSMDDARLVFN--QMSERNVVAWTAMI---------TGCAQHGRCR 482
Query: 141 YCFEHFFQ 118
E+F Q
Sbjct: 483 EALEYFEQ 490
Score = 94.7 bits (234), Expect = 3e-17
Identities = 47/144 (32%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L G+++H I K+G + + T++ MYAK G + A+ +FD++P +V WT +I+
Sbjct: 213 LQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAG 272
Query: 483 YVRQGMLETALEVFK--NGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
Y +QG ++ ALE+ + AE+ PN++T T++L C L+ ++VH + I++G+ +
Sbjct: 273 YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332
Query: 321 VFLGSALVDLYAKEGEIHDAHLLF 250
+++ +AL+ +Y K G + +A LF
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLF 356
Score = 87.4 bits (215), Expect = 4e-15
Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 6/163 (3%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+QG+++H I+KSG + YL+ + MYAK G++ DAR+VFD + ++ WTAMI A
Sbjct: 112 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEA 171
Query: 483 YVRQGMLETALEVFKNG--AELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
+V A + ++ A +P++VT +LL L ++VH KAG +
Sbjct: 172 FVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELE 231
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG 193
+G++LV +YAK G+I A ++F + + + WT ++ G
Sbjct: 232 PRVGTSLVGMYAKCGDISKAQVIFDKLPE--KNVVTWTLLIAG 272
Score = 83.6 bits (205), Expect = 6e-14
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L +GK IH ++ +GY D YL++A+ MYAK G+++DAR VF++M +V WTAMI+
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITG 474
Query: 483 YVRQGMLETALEVFKNGAE--LRPNEVTLTALLPLCN----LDDARQ-VHAFAIKAGFHD 325
+ G ALE F+ + ++P++VT T++L C +++ R+ + + G
Sbjct: 475 CAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKP 534
Query: 324 DVFLGSALVDLYAKEGEIHDA 262
V S VDL + G + +A
Sbjct: 535 MVEHYSCFVDLLGRAGHLEEA 555
>ref|XP_004289268.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Fragaria vesca subsp. vesca]
Length = 794
Score = 109 bits (272), Expect = 1e-21
Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 7/160 (4%)
Frame = -3
Query: 651 KQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYVRQ 472
K+IH I+ SG+ QD +L + Y K G + AR VFD MP W++M+S Y +
Sbjct: 67 KRIHAQILTSGFRQDVFLANLLLDSYKKSGYIVYARNVFDTMPDRSSVTWSSMVSMYTKH 126
Query: 471 GMLETALEVFK---NGAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDDVFL 313
G E AL+VF ++ RPNE T +++ C +D QVH F +K GF +VF+
Sbjct: 127 GKSEEALKVFSEFHRSSDGRPNEYTFPSVIRACTQFGGVDQGSQVHCFVVKTGFDKEVFV 186
Query: 312 GSALVDLYAKEGEIHDAHLLFRCIRQGRGRGIPWT*ILFG 193
G++L+D Y K G+I +A L+F + + WT ++ G
Sbjct: 187 GTSLIDFYVKMGDIEEARLIFDGLEV--KSAVTWTIVIAG 224
Score = 95.5 bits (236), Expect = 2e-17
Identities = 46/144 (31%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
G+DQG Q+H ++K+G+ ++ ++ T++ Y K G +E+AR +FD + V WT +I+
Sbjct: 164 GVDQGSQVHCFVVKTGFDKEVFVGTSLIDFYVKMGDIEEARLIFDGLEVKSAVTWTIVIA 223
Query: 486 AYVRQGMLETALEVFKNGAELR-PNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
Y + G E AL++F + P++ L+ALL C+ + +Q+HA+ ++ G D
Sbjct: 224 GYAKSGKSEAALKLFYQMRDTDVPDKYVLSALLTACSALKFIGGGKQIHAYVLRRGTEMD 283
Query: 321 VFLGSALVDLYAKEGEIHDAHLLF 250
V + + L+D Y K G++ LF
Sbjct: 284 VSVVNVLIDFYTKCGQVLAGQKLF 307
Score = 89.4 bits (220), Expect = 1e-15
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L+ KQ+H M K G D + +A+ +Y+K +A+ VF+EM + VW AM S
Sbjct: 467 LELSKQVHGMTTKYGLCLDIFAGSALIDVYSKCSCTREAKLVFEEMNEKDIVVWNAMFSG 526
Query: 483 YVRQGMLETALEVFKNGAELR--PNEVT----LTALLPLCNLDDARQVHAFAIKAGFHDD 322
Y +Q E AL+++ R PNE T ++A L ++ +Q H+ IK G +D
Sbjct: 527 YAQQQESEEALKLYSKLQLSRQIPNEFTFASVVSAASSLASVQHGQQFHSQIIKVGLEND 586
Query: 321 VFLGSALVDLYAKEGEIHDAHLLF 250
F+ +ALVD+Y+K G I +AH LF
Sbjct: 587 PFVTNALVDMYSKCGSIEEAHKLF 610
Score = 85.9 bits (211), Expect = 1e-14
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 6/144 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L G+++H I+ + ++Y+K ++ MYAK ++ DAR VFD M +V + AMI
Sbjct: 366 LKHGREVHAYTIRVDLVYEYYVKNSLIDMYAKCDSLTDARTVFDSMTDHNVVSYNAMIEG 425
Query: 483 YVRQGMLETALEVFK--NGAELRPNEVTLTALLPL----CNLDDARQVHAFAIKAGFHDD 322
Y RQ L AL++F ++P+ +T +LL + L+ ++QVH K G D
Sbjct: 426 YSRQDKLAEALDLFNLMRLRSVQPSILTFVSLLGVSAASLTLELSKQVHGMTTKYGLCLD 485
Query: 321 VFLGSALVDLYAKEGEIHDAHLLF 250
+F GSAL+D+Y+K +A L+F
Sbjct: 486 IFAGSALIDVYSKCSCTREAKLVF 509
Score = 69.7 bits (169), Expect = 9e-10
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Frame = -3
Query: 654 GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYVR 475
GKQIH +++ G D + + Y K G V +++FD++ + WT MI+ Y++
Sbjct: 268 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCGQVLAGQKLFDKVVDRDLISWTTMIAGYMQ 327
Query: 474 QGMLETALEVFKNGAEL--RPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDDVFL 313
M A+++F L RP+ +++L C L R+VHA+ I+ + ++
Sbjct: 328 NSMHVEAVKLFSEMTRLGWRPDGYGCSSILTSCGSLEALKHGREVHAYTIRVDLVYEYYV 387
Query: 312 GSALVDLYAKEGEIHDAHLLF 250
++L+D+YAK + DA +F
Sbjct: 388 KNSLIDMYAKCDSLTDARTVF 408
Score = 68.6 bits (166), Expect = 2e-09
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
+ G+Q H+ IIK G D ++ A+ MY+K G++E+A ++FD + VA W +IS
Sbjct: 568 VQHGQQFHSQIIKVGLENDPFVTNALVDMYSKCGSIEEAHKLFDSKTLKDVACWNTIIST 627
Query: 483 YVRQGMLETALEVFKN--GAELRPNEVTLTALLPLCN 379
Y G E AL +F+ ++PN +T +L C+
Sbjct: 628 YAHHGEAENALLMFERMMNDGIKPNYITFVGVLSACS 664
>ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like
[Arabidopsis thaliana] gi|332641888|gb|AEE75409.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 628
Score = 109 bits (272), Expect = 1e-21
Identities = 57/147 (38%), Positives = 85/147 (57%), Gaps = 6/147 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L G+++H +IK+ YL YL+T + Y K +EDAR+V DEMP +V WTAMIS
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 483 YVRQGMLETALEVFKN--GAELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDD 322
Y + G AL VF ++ +PNE T +L C L +Q+H +K +
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCI 241
+F+GS+L+D+YAK G+I +A +F C+
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECL 214
Score = 85.5 bits (210), Expect = 2e-14
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
GL GKQIH +I+K Y ++ +++ MYAK G +++AR++F+ +P V TA+I+
Sbjct: 168 GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIA 227
Query: 486 AYVRQGMLETALEVFK--NGAELRPNEVT----LTALLPLCNLDDARQVHAFAIKAGFHD 325
Y + G+ E ALE+F + + PN VT LTAL L LD +Q H ++
Sbjct: 228 GYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLF 250
L ++L+D+Y+K G + A LF
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLF 312
Score = 60.1 bits (144), Expect = 7e-07
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 17/172 (9%)
Frame = -3
Query: 726 MRSRGVSPNEXXXXXXXXXLG----LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGA 559
+ S G+SPN L LD GKQ H +++ L+ ++ MY+K G
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 558 VEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVF---KNGAELRPNEVTLTALLP 388
+ AR++FD MP W AM+ Y + G+ LE+F ++ ++P+ VTL A+L
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 387 LC----------NLDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDA 262
C N+ D + K G +VD+ + G I +A
Sbjct: 365 GCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH----YGCIVDMLGRAGRIDEA 412
>ref|XP_004308660.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 108 bits (271), Expect = 1e-21
Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Frame = -3
Query: 729 EMRSRGVSPNEXXXXXXXXXLG----LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFG 562
+M G+ P++ G L +G+Q+H+ ++K G+ Y+ +A+ MYAK G
Sbjct: 307 DMHFSGIMPSQYTFVGVINACGDIGALREGQQVHSFLLKMGFEGQVYIMSALVDMYAKCG 366
Query: 561 AVEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVF----KNGAELRPNEVTLTAL 394
V DAR F+ + P V +WT+MI YV+ G E AL ++ K G + PN++T+ ++
Sbjct: 367 RVADARNGFEYIKEPDVVLWTSMIGGYVQNGEYEAALGLYCRMHKEG--IMPNKLTMASV 424
Query: 393 LPLC----NLDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLFRCIRQGRG 226
L C + + +Q+HA IK GF +V +GSAL +YAK G + D +L+FR R
Sbjct: 425 LKACSNLSSFEQGKQIHARTIKYGFSLEVPIGSALSTMYAKCGNLEDGNLVFR--RMPVR 482
Query: 225 RGIPWT*ILFG-NKSLRG*YGCSCFEECK 142
+ W I+ G +++ RG FEE +
Sbjct: 483 DVVAWNGIISGLSQNGRGTEALDLFEEMR 511
Score = 89.0 bits (219), Expect = 1e-15
Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
+D GKQIH + +K+G + + A+ MY K G+++DA + F+ + W+AMI
Sbjct: 232 VDTGKQIHCVAVKNGLMSFVSVGNALVTMYGKCGSLDDALRTFELSGDKNSITWSAMICG 291
Query: 483 YVRQGMLETALEVFK--NGAELRPNEVTLTALLPLCN----LDDARQVHAFAIKAGFHDD 322
+ + G AL++F+ + + + P++ T ++ C L + +QVH+F +K GF
Sbjct: 292 FGQSGDSHKALDLFRDMHFSGIMPSQYTFVGVINACGDIGALREGQQVHSFLLKMGFEGQ 351
Query: 321 VFLGSALVDLYAKEGEIHDAHLLFRCIRQ 235
V++ SALVD+YAK G + DA F I++
Sbjct: 352 VYIMSALVDMYAKCGRVADARNGFEYIKE 380
Score = 83.2 bits (204), Expect = 8e-14
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 13/191 (6%)
Frame = -3
Query: 726 MRSRGVSPNEXXXXXXXXXLGLDQ-----GKQIHTMIIKSGYLQDHYLKTAIFYMYAKFG 562
MR+ SPN + G+ +H ++IK D ++ + + MY K G
Sbjct: 103 MRAENTSPNSHTFAGVFTAASSEASDVLGGRHVHAVVIKDVRSFDVFVGSCLVNMYCKMG 162
Query: 561 AVEDARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVF----KNGAELRPNEVTLTAL 394
V DAR+VFD M + W MIS Y Q M A+EVF ++ NE LT++
Sbjct: 163 LVGDARKVFDRMSERNSVSWATMISGYAMQRMAGEAVEVFRLMRRSEENEGENEFVLTSV 222
Query: 393 LPLCN----LDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLFRCIRQGRG 226
+ +D +Q+H A+K G V +G+ALV +Y K G + DA F G
Sbjct: 223 VSALAVREFVDTGKQIHCVAVKNGLMSFVSVGNALVTMYGKCGSLDDALRTFEL--SGDK 280
Query: 225 RGIPWT*ILFG 193
I W+ ++ G
Sbjct: 281 NSITWSAMICG 291
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 108 bits (271), Expect = 1e-21
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 27/166 (16%)
Frame = -3
Query: 657 QGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYV 478
+G+++H +IK+ YL +L+T + +Y K ++ DA VFDEMP +V WTAMISAY
Sbjct: 261 EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYS 320
Query: 477 RQGMLETALEVFKNGAEL-----------------------RPNEVTLTALLPLCNLD-- 373
++G AL +F ++ PNE T +L C
Sbjct: 321 QRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLG 380
Query: 372 --DARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHDAHLLFRCI 241
RQ+H+ IK + D VF+GS+L+D+YAK+G+IH+A +F C+
Sbjct: 381 FILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECL 426
Score = 86.3 bits (212), Expect = 1e-14
Identities = 53/145 (36%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMIS 487
G G+QIH++IIK Y ++ +++ MYAK G + +AR VF+ +P V TA+IS
Sbjct: 380 GFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIIS 439
Query: 486 AYVRQGMLETALEVFK--NGAELRPNEVT----LTALLPLCNLDDARQVHAFAIKAGFHD 325
Y + G+ E ALE+F+ G ++ N VT LTAL L LD +QVH +++
Sbjct: 440 GYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPS 499
Query: 324 DVFLGSALVDLYAKEGEIHDAHLLF 250
V L ++L+D+Y+K G + + +F
Sbjct: 500 FVVLQNSLIDMYSKCGNLTYSRRIF 524
>ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
gi|300165970|gb|EFJ32577.1| hypothetical protein
SELMODRAFT_399 [Selaginella moellendorffii]
Length = 732
Score = 108 bits (271), Expect = 1e-21
Identities = 59/142 (41%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
LD G+++H I +SG D Y A+ MY K + EDA Q+F M P+V WT++I
Sbjct: 34 LDDGRKVHAYIRESGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGN 93
Query: 483 YVRQGML--ETALEVFKNGAE-LRPNEVTLTALLPLCNLDDARQVHAFAIKAGFHDDVFL 313
+ + G L E+ L K E +RPN +T+ A+L CNL D RQVH + ++AG D L
Sbjct: 94 FAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLTDGRQVHGYVLEAGMSLDTSL 153
Query: 312 GSALVDLYAKEGEIHDAHLLFR 247
G+ALVD+Y K G++ +A L+ R
Sbjct: 154 GNALVDMYCKTGDVDEADLVLR 175
Score = 80.1 bits (196), Expect = 7e-13
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
Frame = -3
Query: 657 QGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISAYV 478
+G IH M+++SG+ + + A+ +MYAK G E AR VFD M + W +++AYV
Sbjct: 436 EGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYV 495
Query: 477 RQGMLETALEVFKNGAELRPNEVTLTALLPLCN-----LDDARQVHAFAIKAGFHD--DV 319
+G+ A+E+F ++ ++VT A L C+ L + +H + + GF + D
Sbjct: 496 EKGLNRDAVEMFWK-MDVARDKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDT 554
Query: 318 FLGSALVDLYAKEGEIHDAHLLF 250
+ALV++Y K G + +A +F
Sbjct: 555 VAATALVNMYGKCGSLQEARKIF 577
Score = 73.9 bits (180), Expect = 5e-11
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Frame = -3
Query: 729 EMRSRGVSPNEXXXXXXXXXLGLDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVED 550
+M G+ PN L G+Q+H ++++G D L A+ MY K G V++
Sbjct: 110 KMELEGIRPNLITMVAVLRACNLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDE 169
Query: 549 ARQVFDEMPVPHVAVWTAMISAYVRQGMLETALEVFKNGAE--LRPNEVTLTALLPLC-- 382
A V EMP V W MIS Y + G + L + L P +VT LL C
Sbjct: 170 ADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSS 229
Query: 381 --NLDDARQVHAFAIKAGFHDDVFLGSALVDLYAKEGEIHD 265
+L + + +H + G D + S L+ +Y K G + D
Sbjct: 230 GEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLED 270
Score = 67.0 bits (162), Expect = 6e-09
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Frame = -3
Query: 663 LDQGKQIHTMIIKSGYLQDHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAMISA 484
L QG +H I + G+ + + ++ MYAK G+++ AR++F+ MP + W ++ISA
Sbjct: 334 LAQGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISA 392
Query: 483 YVRQGMLETALEVFKNG--AELRPNEVTLTALLPLC----NLDDARQVHAFAIKAGFHDD 322
++ G A + F+ RP+EVT ++L C N + +H +++GF
Sbjct: 393 AIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKR 452
Query: 321 VFLGSALVDLYAKEGEIHDAHLLF 250
+ +AL+ +YAK G+ A +F
Sbjct: 453 TGVANALIFMYAKLGDHEAARNVF 476
Score = 58.2 bits (139), Expect = 3e-06
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = -3
Query: 666 GLDQGKQIHTMIIKSGYLQ--DHYLKTAIFYMYAKFGAVEDARQVFDEMPVPHVAVWTAM 493
GL GK IH ++ G+ D TA+ MY K G++++AR++FDEM V WT++
Sbjct: 532 GLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDVVTWTSL 591
Query: 492 ISAYVRQGMLETALEVFKNGAE--LRPNEVTLTALLPLCN 379
I AY + +E AL++ K + ++ ++V ++L C+
Sbjct: 592 IVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSILSGCD 631