BLASTX nr result
ID: Ephedra25_contig00005006
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00005006
(456 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28414.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 67 3e-09
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 66 6e-09
ref|XP_002302837.1| hypothetical protein POPTR_0002s22250g [Popu... 61 1e-07
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 60 2e-07
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 60 2e-07
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr... 60 2e-07
ref|XP_002320513.1| RNA recognition motif-containing family prot... 60 2e-07
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin... 60 3e-07
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 59 5e-07
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 59 5e-07
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 59 9e-07
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo... 58 1e-06
gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus pe... 57 2e-06
ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containin... 56 4e-06
>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/128 (32%), Positives = 74/128 (57%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L S + +NS + R+Q +EHEQ LE++RR+L++L L PK T + ++
Sbjct: 400 DSELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSELQL---TPK---TAHPYFGYS 453
Query: 195 LFDFQDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTDDHDSYNGQVHINL 374
+ +F+ + + +F ++ +YLLEVLN+ S + ++ N ++ +S G +NL
Sbjct: 454 MDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNNGSTSEDRS--TNYNEQESSQG---LNL 508
Query: 375 PDSPFTTP 398
P+SPF +P
Sbjct: 509 PESPFASP 516
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/128 (32%), Positives = 74/128 (57%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L S + +NS + R+Q +EHEQ LE++RR+L++L L PK T + ++
Sbjct: 447 DSELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSELQL---TPK---TAHPYFGYS 500
Query: 195 LFDFQDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTDDHDSYNGQVHINL 374
+ +F+ + + +F ++ +YLLEVLN+ S + ++ N ++ +S G +NL
Sbjct: 501 MDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNNGSTSEDRS--TNYNEQESSQG---LNL 555
Query: 375 PDSPFTTP 398
P+SPF +P
Sbjct: 556 PESPFASP 563
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 65.9 bits (159), Expect = 6e-09
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = +3
Query: 30 STRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHNLFDFQ 209
S G+ +++ + R+Q+ +E E +E++RR+L++ + +K HN F +
Sbjct: 456 SVPGIWDDARLIRKQLR-EEQEHAIELERRRLSEFQMA----------SKPLSHNYFGYP 504
Query: 210 DPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPK--VNNTDDHDSYNGQVHINLPDS 383
+ED N F TD+F YLL+VLNSDS + +K + N D +S G +NLP+S
Sbjct: 505 MDDFKLSEDQNGFPSTDRFGYLLDVLNSDSASDDKTRHASGNYSDQESSQG---LNLPES 561
Query: 384 PFTTP 398
PF +P
Sbjct: 562 PFASP 566
>ref|XP_002302837.1| hypothetical protein POPTR_0002s22250g [Populus trichocarpa]
gi|224147115|ref|XP_002336411.1| predicted protein
[Populus trichocarpa] gi|222844563|gb|EEE82110.1|
hypothetical protein POPTR_0002s22250g [Populus
trichocarpa]
Length = 140
Score = 61.2 bits (147), Expect = 1e-07
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L S + +NS R+Q F +EHEQ +E++RR+L++ H PK + ++ F H+
Sbjct: 15 DSELHSALRVCDNSKSLRKQ-FMEEHEQEIELERRRLSEFHFS---PKPLNRHS-FLGHS 69
Query: 195 LFDFQDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNT--DDHDSYNGQVHI 368
+ D + + E +FS + F+Y +VLN+ S + EK + T D DS G +
Sbjct: 70 M----DELKLSGEQ-AEFSSAEHFNYWFDVLNNGSTSEEKHRHTRTSCSDQDSNQG---V 121
Query: 369 NLPDSPFTTPRASYGVNNI 425
NLP+SPF + S G++ +
Sbjct: 122 NLPESPFASAIGS-GISTV 139
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 60.5 bits (145), Expect = 2e-07
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L + + NNS + R+Q+ +EHEQ +E++RR+L+++ L H+
Sbjct: 451 DTELHTMPRVCNNSRLLRKQLM-EEHEQAIELERRRLSEMQL---------ACKPMNHHS 500
Query: 195 LFDF---QDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNT--DDHDSYNGQ 359
F + + + + DF ++F+YLL+VLN+ S + ++ +T +D DS G
Sbjct: 501 YFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSSQG- 559
Query: 360 VHINLPDSPFTTPRASYGVNNI 425
+NLP+SPF +P S G++ +
Sbjct: 560 --LNLPESPFASPIGS-GISTV 578
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 60.5 bits (145), Expect = 2e-07
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L + + NNS + R+Q+ +EHEQ +E++RR+L+++ L H+
Sbjct: 454 DTELHTMPRVCNNSRLLRKQLM-EEHEQAIELERRRLSEMQL---------ACKPMNHHS 503
Query: 195 LFDF---QDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNT--DDHDSYNGQ 359
F + + + + DF ++F+YLL+VLN+ S + ++ +T +D DS G
Sbjct: 504 YFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSSQG- 562
Query: 360 VHINLPDSPFTTPRASYGVNNI 425
+NLP+SPF +P S G++ +
Sbjct: 563 --LNLPESPFASPIGS-GISTV 581
>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
gi|557550378|gb|ESR61007.1| hypothetical protein
CICLE_v10014902mg [Citrus clementina]
Length = 524
Score = 60.5 bits (145), Expect = 2e-07
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L + + NNS + R+Q+ +EHEQ +E++RR+L+++ L H+
Sbjct: 396 DTELHTMPRVCNNSRLLRKQLM-EEHEQAIELERRRLSEMQL---------ACKPMNHHS 445
Query: 195 LFDF---QDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNT--DDHDSYNGQ 359
F + + + + DF ++F+YLL+VLN+ S + ++ +T +D DS G
Sbjct: 446 YFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSSQG- 504
Query: 360 VHINLPDSPFTTPRASYGVNNI 425
+NLP+SPF +P S G++ +
Sbjct: 505 --LNLPESPFASPIGS-GISTV 523
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 60.5 bits (145), Expect = 2e-07
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L S + +NS + R+Q+ +EHEQ LE++RR+L++ L PK + + + H+
Sbjct: 428 DSELHSVPRVCDNSRLLRKQLM-EEHEQALELERRRLSEFQL---APKPLARHA-YHGHS 482
Query: 195 LFDFQDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTD--DHDSYNGQVHI 368
+ +F+ + E + F + F+Y +VLN+ S + EK + T+ + DS G +
Sbjct: 483 MDEFK----LSEEQADQFPSAEHFNYWFDVLNNGSTSEEKHRHTRTNCSEQDSNQG---V 535
Query: 369 NLPDSPFTT 395
NLP+SPF +
Sbjct: 536 NLPESPFAS 544
>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 566
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/109 (31%), Positives = 62/109 (56%)
Frame = +3
Query: 69 RQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHNLFDFQDPIGTTNEDFNDF 248
R+ F +EH+QVLE +RR+ +++HL +S + + +++ DF+ P N D +F
Sbjct: 456 RKQFIEEHQQVLECERRRRSEMHLA--AKPLSHHHHLYYGYSMDDFKHP--EANADQAEF 511
Query: 249 SLTDQFSYLLEVLNSDSMNSEKPKVNNTDDHDSYNGQVHINLPDSPFTT 395
+F+ LL+ N+ S++ +K + NT+ D + I LP+SPF +
Sbjct: 512 PYAKEFNILLDAWNNASISEDKIRHINTNYTDHQDSSQGIILPESPFAS 560
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L + + NNS + R+Q+ +EHEQ +E++RR+L+++ L H+
Sbjct: 451 DTELHTMPRVCNNSRLLRKQLM-EEHEQAIELERRRLSEMQL---------ACKPMNHHS 500
Query: 195 LFDF---QDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTDDHDSYNGQVH 365
F + + + + DF ++F+YLL+VLN+ S + + +V++ H +
Sbjct: 501 YFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSED--QVSHISTHYNDQDSQG 558
Query: 366 INLPDSPFTTPRASYGVNNI 425
+NLP+SPF +P S G++ +
Sbjct: 559 LNLPESPFASPIGS-GISTV 577
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Frame = +3
Query: 15 DFQLGSTRGLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHN 194
D +L + + NNS + R+Q+ +EHEQ +E++RR+L+++ L H+
Sbjct: 454 DTELHTMPRVCNNSRLLRKQLM-EEHEQAIELERRRLSEMQL---------ACKPMNHHS 503
Query: 195 LFDF---QDPIGTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTDDHDSYNGQVH 365
F + + + + DF ++F+YLL+VLN+ S + + +V++ H +
Sbjct: 504 YFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSED--QVSHISTHYNDQDSQG 561
Query: 366 INLPDSPFTTPRASYGVNNI 425
+NLP+SPF +P S G++ +
Sbjct: 562 LNLPESPFASPIGS-GISTV 580
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/119 (30%), Positives = 70/119 (58%)
Frame = +3
Query: 69 RQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHNLFDFQDPIGTTNEDFNDF 248
R+ F +E+EQ LE++RR+L+++HL ++ + + + +F+ P + + +
Sbjct: 454 RKQFMEENEQALELERRRLSEMHL----AAKPLSHHFYYGYPMDEFKHP--EAHAEQAEV 507
Query: 249 SLTDQFSYLLEVLNSDSMNSEKPKVNNTDDHDSYNGQVHINLPDSPFTTPRASYGVNNI 425
+F+YLL+VLN+ S + K + N++ +D + Q INLP+SPF +P S G++ +
Sbjct: 508 PSAKEFTYLLDVLNNGSTSEGKIRHRNSNYNDQDSSQ-GINLPESPFASPIVS-GISTV 564
>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 556
Score = 58.2 bits (139), Expect = 1e-06
Identities = 43/125 (34%), Positives = 68/125 (54%)
Frame = +3
Query: 51 NSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHNLFDFQDPIGTTN 230
NS + RRQ F ++HE+ LE++ R+L+ +HL N F +++ + + +
Sbjct: 444 NSRLLRRQ-FMEQHERALELETRRLSGMHLAG----KPVNNQPFFGYSMDELK-----VS 493
Query: 231 EDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTDDHDSYNGQVHINLPDSPFTTPRASY 410
ED TDQ S LL+VLN S + +K K +TD H + +NLPDSPF + AS
Sbjct: 494 EDQFTLPSTDQVSRLLDVLNCGSTSDDKFK--HTDTHFTDQESQALNLPDSPFASSIAS- 550
Query: 411 GVNNI 425
G++ +
Sbjct: 551 GISTV 555
>gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 57.4 bits (137), Expect = 2e-06
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +3
Query: 39 GLDNNSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHNLFDFQDPI 218
G DN+ + R+ +E E +E++R +LA LH ++ F D + F
Sbjct: 449 GCDNSRLL--RKKLVEEQEYAIELERMRLAGLHFARKPVANHPHSSYFMDGHKF------ 500
Query: 219 GTTNEDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTD--DHDSYNGQVHINLPDSPFT 392
+ED +F + F+YL +VLNS S + +K K +T+ DH+S +NLPDSPF
Sbjct: 501 ---SEDNFNFPSAECFNYLFDVLNSGSTSDDKHKHTDTNYTDHESQG----LNLPDSPFA 553
Query: 393 TPRAS 407
T AS
Sbjct: 554 TSVAS 558
>ref|XP_004294464.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 556
Score = 56.2 bits (134), Expect = 4e-06
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +3
Query: 51 NSDMGRRQMFFDEHEQVLEMQRRKLAQLHLQDDVPKMSSTNTKFKDHNLFDFQDPIGTTN 230
N+ R+ +E E LE++R +LAQLH ++ N + + + D +
Sbjct: 443 NNSRWLRKKLLEEQEIALELERSRLAQLHFT----RIPVANQPYSGYVM----DGRMVSE 494
Query: 231 EDFNDFSLTDQFSYLLEVLNSDSMNSEKPKVNNTD--DHDSYNGQVHINLPDSPFTTPRA 404
++FN F + F +LL+V+N+ S + +KPK T+ D DS +NLPDSPF T A
Sbjct: 495 DNFN-FPPAECFDFLLDVINNGSTSDDKPKHTGTNYTDQDSQG----LNLPDSPFATSIA 549
Query: 405 S 407
S
Sbjct: 550 S 550