BLASTX nr result
ID: Ephedra25_contig00005005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00005005
(773 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 295 2e-77
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind... 290 5e-76
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 288 1e-75
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 288 1e-75
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr... 288 1e-75
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 281 1e-74
ref|XP_002320513.1| RNA recognition motif-containing family prot... 284 3e-74
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 283 6e-74
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 283 6e-74
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo... 282 8e-74
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr... 282 8e-74
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr... 282 8e-74
gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus pe... 279 9e-73
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 279 9e-73
gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-bind... 277 3e-72
ref|XP_002302838.2| RNA recognition motif-containing family prot... 276 4e-72
ref|XP_001771275.1| predicted protein [Physcomitrella patens] gi... 275 7e-72
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin... 276 7e-72
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo... 273 6e-71
ref|XP_001758251.1| predicted protein [Physcomitrella patens] gi... 271 1e-70
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 295 bits (754), Expect = 2e-77
Identities = 152/200 (76%), Positives = 173/200 (86%), Gaps = 2/200 (1%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
ME+ +LL+ K+ +PISIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 250 MELLQLLRAKR-TPISIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGG-GATAPTSNAGSRQIYLTFPAESTFTEE 501
++RLIDRPHGQHA+VLAEDA++YTEY+ + GA AGSRQIYLTFPAESTFTEE
Sbjct: 309 SIRLIDRPHGQHAVVLAEDAAKYTEYRSDRNDPGAIV----AGSRQIYLTFPAESTFTEE 364
Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
DVSNYFRT+GPVQDVRIP QQKRMFGFVTF+YPETVK IL KGNPH VCG+RVLVKPY+E
Sbjct: 365 DVSNYFRTFGPVQDVRIPCQQKRMFGFVTFMYPETVKMILNKGNPHFVCGARVLVKPYRE 424
Query: 682 KGKLADRKPAEKQEFPGYSS 741
K +L DRK EK + P Y S
Sbjct: 425 KSRLVDRKYPEKIDHPVYYS 444
>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
protein with RNA-binding domain, putative isoform 1
[Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
zinc fingerfamily protein with RNA-binding domain,
putative isoform 1 [Theobroma cacao]
Length = 545
Score = 290 bits (741), Expect = 5e-76
Identities = 147/201 (73%), Positives = 168/201 (83%), Gaps = 3/201 (1%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+E++ELL+ ++G P+SIA+LP LYYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 250 LELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 309
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
++RLIDRPHGQH+++LAEDA +Y EY GE GG A GSRQIYLTFPAESTFTE
Sbjct: 310 SIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVA-----GSRQIYLTFPAESTFTE 364
Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
EDVSNYF +GPVQDVRIP QQKRMFGFVTFVY ETVK ILAKGNPH VCG+RVLVKPY+
Sbjct: 365 EDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVKPYR 424
Query: 679 EKGKLADRKPAEKQEFPGYSS 741
EK ++ DRK EK + P Y S
Sbjct: 425 EKSRVVDRKFTEKVQQPMYYS 445
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 288 bits (737), Expect = 1e-75
Identities = 146/203 (71%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
Frame = +1
Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309
Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEE 501
+RLIDRPHGQH+++LAED Y EY GE GG A GSRQIYLTFPAESTFTE+
Sbjct: 310 IRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQ 364
Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+E
Sbjct: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424
Query: 682 KGKLADRKPAEKQEFPGYSSLGY 750
K +L DRK EK + P + SL +
Sbjct: 425 KSRLVDRKYVEKMQHPLFCSLHF 447
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 288 bits (737), Expect = 1e-75
Identities = 146/203 (71%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
Frame = +1
Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309
Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEE 501
+RLIDRPHGQH+++LAED Y EY GE GG A GSRQIYLTFPAESTFTE+
Sbjct: 310 IRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQ 364
Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+E
Sbjct: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424
Query: 682 KGKLADRKPAEKQEFPGYSSLGY 750
K +L DRK EK + P + SL +
Sbjct: 425 KSRLVDRKYVEKMQHPLFCSLHF 447
>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
gi|557550378|gb|ESR61007.1| hypothetical protein
CICLE_v10014902mg [Citrus clementina]
Length = 524
Score = 288 bits (737), Expect = 1e-75
Identities = 146/203 (71%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
Frame = +1
Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 195 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 254
Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEE 501
+RLIDRPHGQH+++LAED Y EY GE GG A GSRQIYLTFPAESTFTE+
Sbjct: 255 IRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQ 309
Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+E
Sbjct: 310 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 369
Query: 682 KGKLADRKPAEKQEFPGYSSLGY 750
K +L DRK EK + P + SL +
Sbjct: 370 KSRLVDRKYVEKMQHPLFCSLHF 392
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 281 bits (719), Expect(2) = 1e-74
Identities = 142/194 (73%), Positives = 164/194 (84%), Gaps = 2/194 (1%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+EI ELL+ ++G PISIA+LP +YYEK+GRTLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 235 IEIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 294
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSN-AGSRQIYLTFPAESTFTEE 501
++RL+DRPHGQH+++LAED +Y EY GE T P AGSRQIYLTFPAES FTE+
Sbjct: 295 SIRLLDRPHGQHSVILAEDIPKYLEYAGE----KTEPGGIIAGSRQIYLTFPAESNFTEQ 350
Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
DVSNYF YGPVQDVRIP QQKRMFGFVTFVY ETV+ IL+KGNPH VCG+RVLVKPY+E
Sbjct: 351 DVSNYFNKYGPVQDVRIPCQQKRMFGFVTFVYAETVRHILSKGNPHFVCGARVLVKPYRE 410
Query: 682 KGKLADRKPAEKQE 723
K +L DRK +EK +
Sbjct: 411 KSRLVDRKFSEKMQ 424
Score = 25.8 bits (55), Expect(2) = 1e-74
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 62 SIPLIDGLDNDDLPPVLVAGSLERLEVEL 148
S P ++ L NDD V+ GSLE+LE+E+
Sbjct: 211 SHPNLNELSNDD--HVVSPGSLEKLEIEI 237
>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 554
Score = 284 bits (726), Expect = 3e-74
Identities = 142/201 (70%), Positives = 167/201 (83%), Gaps = 3/201 (1%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+E++ELL+ ++G P+SIA+LP +YYEK+GR LQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 226 LELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYSLTKLLARLKN 285
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
++RLIDRPHGQH+++L ED +Y EY GE GG A GSRQIYLTFPAESTFTE
Sbjct: 286 SIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVA-----GSRQIYLTFPAESTFTE 340
Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK IL+KGNPH VCG+RVLVKPY+
Sbjct: 341 QDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYR 400
Query: 679 EKGKLADRKPAEKQEFPGYSS 741
EK +L DRK AEK + P + S
Sbjct: 401 EKSRLVDRKYAEKIQHPFFYS 421
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 283 bits (723), Expect = 6e-74
Identities = 146/206 (70%), Positives = 168/206 (81%), Gaps = 6/206 (2%)
Frame = +1
Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309
Query: 328 VRLIDR---PHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTF 492
+RLIDR PHGQH+++LAED Y EY GE GG A GSRQIYLTFPAESTF
Sbjct: 310 IRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTF 364
Query: 493 TEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKP 672
TE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKP
Sbjct: 365 TEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 424
Query: 673 YKEKGKLADRKPAEKQEFPGYSSLGY 750
Y+EK +L DRK EK + P + SL +
Sbjct: 425 YREKSRLVDRKYVEKMQHPLFCSLHF 450
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 283 bits (723), Expect = 6e-74
Identities = 146/206 (70%), Positives = 168/206 (81%), Gaps = 6/206 (2%)
Frame = +1
Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309
Query: 328 VRLIDR---PHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTF 492
+RLIDR PHGQH+++LAED Y EY GE GG A GSRQIYLTFPAESTF
Sbjct: 310 IRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTF 364
Query: 493 TEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKP 672
TE+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKP
Sbjct: 365 TEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 424
Query: 673 YKEKGKLADRKPAEKQEFPGYSSLGY 750
Y+EK +L DRK EK + P + SL +
Sbjct: 425 YREKSRLVDRKYVEKMQHPLFCSLHF 450
>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 557
Score = 282 bits (722), Expect = 8e-74
Identities = 139/191 (72%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
MEI ELL+ + GSP+SIA+LP +YYEK+GR+LQAEGYLTESQRHGK GYSLTKLLARLK
Sbjct: 229 MEIVELLRSRIGSPVSIASLPMMYYEKYGRSLQAEGYLTESQRHGKTGYSLTKLLARLKH 288
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
++R++DRPHGQH+++LAED RY +Y GE + GSRQIYLTFPAESTFTE+D
Sbjct: 289 SIRIVDRPHGQHSVILAEDVPRYLDYAGEKNEPGVIVS---GSRQIYLTFPAESTFTEQD 345
Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
VSNYF +GPVQDVRIP QQKRMFGFVTFVYPETV+ IL+KGNPH VCG+RVLVKPY+EK
Sbjct: 346 VSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYPETVRQILSKGNPHFVCGARVLVKPYREK 405
Query: 685 GKLADRKPAEK 717
+L DRK AEK
Sbjct: 406 SRLVDRKFAEK 416
>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921060|ref|XP_006452536.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921062|ref|XP_006452537.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555760|gb|ESR65774.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555762|gb|ESR65776.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555763|gb|ESR65777.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 547
Score = 282 bits (722), Expect = 8e-74
Identities = 145/202 (71%), Positives = 163/202 (80%), Gaps = 1/202 (0%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+EI ELL+ ++G+PISIA+LP LYYEK+G+ LQA GYLTESQRHGKAGYSLTKLLARLK
Sbjct: 239 LEIIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKN 298
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
+VRLIDRPHGQHA++LAEDA +Y E + E T GSRQIYLTFPAESTFTE+D
Sbjct: 299 SVRLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVT---GSRQIYLTFPAESTFTEDD 355
Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
VSNYF TYGPV DVRIP QQKRMFGFVTF +TVK ILAKGNPH VCG+RVLVKPY+EK
Sbjct: 356 VSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREK 415
Query: 685 GKLADRKPAEKQEFPGYSSLGY 750
KL DRK E+ E P Y S Y
Sbjct: 416 SKLVDRKYQERMESPMYFSPQY 437
>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
gi|567921054|ref|XP_006452533.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|567921058|ref|XP_006452535.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
CCCH domain-containing protein 18-like isoform X1
[Citrus sinensis] gi|568841992|ref|XP_006474937.1|
PREDICTED: zinc finger CCCH domain-containing protein
18-like isoform X2 [Citrus sinensis]
gi|557555758|gb|ESR65772.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555759|gb|ESR65773.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
gi|557555761|gb|ESR65775.1| hypothetical protein
CICLE_v10007876mg [Citrus clementina]
Length = 565
Score = 282 bits (722), Expect = 8e-74
Identities = 145/202 (71%), Positives = 163/202 (80%), Gaps = 1/202 (0%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+EI ELL+ ++G+PISIA+LP LYYEK+G+ LQA GYLTESQRHGKAGYSLTKLLARLK
Sbjct: 239 LEIIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKN 298
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
+VRLIDRPHGQHA++LAEDA +Y E + E T GSRQIYLTFPAESTFTE+D
Sbjct: 299 SVRLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVT---GSRQIYLTFPAESTFTEDD 355
Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
VSNYF TYGPV DVRIP QQKRMFGFVTF +TVK ILAKGNPH VCG+RVLVKPY+EK
Sbjct: 356 VSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREK 415
Query: 685 GKLADRKPAEKQEFPGYSSLGY 750
KL DRK E+ E P Y S Y
Sbjct: 416 SKLVDRKYQERMESPMYFSPQY 437
>gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
Length = 564
Score = 279 bits (713), Expect = 9e-73
Identities = 138/198 (69%), Positives = 166/198 (83%), Gaps = 1/198 (0%)
Frame = +1
Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARL-KT 327
EI+ELL+ ++G PISIA+LP +YY+KFG++LQAEGYLTESQRHGKAGYSLTKLLARL +
Sbjct: 239 EITELLRSRRGIPISIASLPMMYYDKFGKSLQAEGYLTESQRHGKAGYSLTKLLARLGSS 298
Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDV 507
+RLIDRPHGQHA++LAED+ +Y +++ E G + GSRQIYLTFPAESTF+E+DV
Sbjct: 299 IRLIDRPHGQHAVILAEDSPKYADHRNEKGDPGPIVS---GSRQIYLTFPAESTFSEDDV 355
Query: 508 SNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKG 687
SNYF T+GPV+DVRIP QQKRMFGFVTFV+ +TVK ILAKGNPH VCGSRVLVKPY+EK
Sbjct: 356 SNYFSTFGPVEDVRIPCQQKRMFGFVTFVHADTVKMILAKGNPHYVCGSRVLVKPYREKS 415
Query: 688 KLADRKPAEKQEFPGYSS 741
KL DRK E+ + Y S
Sbjct: 416 KLVDRKHQERMDPAAYLS 433
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 279 bits (713), Expect = 9e-73
Identities = 140/201 (69%), Positives = 166/201 (82%), Gaps = 3/201 (1%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
ME++ELL+ ++G P+SIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 252 MELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 311
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
++R+IDRPHGQH+++L ED +Y EY GE GG A GSRQIYLTFPAES FTE
Sbjct: 312 SIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVA-----GSRQIYLTFPAESIFTE 366
Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
DVS YF +GPVQDVRIP QQKRMFGFVTF++ ETVK ILAKGNPH VCG+RVLVKPY+
Sbjct: 367 HDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGARVLVKPYR 426
Query: 679 EKGKLADRKPAEKQEFPGYSS 741
EK +L DRK +EK + P Y+S
Sbjct: 427 EKSRLIDRKFSEKLQHPMYNS 447
>gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
putative isoform 4, partial [Theobroma cacao]
Length = 430
Score = 277 bits (709), Expect = 3e-72
Identities = 139/185 (75%), Positives = 159/185 (85%), Gaps = 3/185 (1%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+E++ELL+ ++G P+SIA+LP LYYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 250 LELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 309
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
++RLIDRPHGQH+++LAEDA +Y EY GE GG A GSRQIYLTFPAESTFTE
Sbjct: 310 SIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVA-----GSRQIYLTFPAESTFTE 364
Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
EDVSNYF +GPVQDVRIP QQKRMFGFVTFVY ETVK ILAKGNPH VCG+RVLVKPY+
Sbjct: 365 EDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVKPYR 424
Query: 679 EKGKL 693
EK ++
Sbjct: 425 EKSRV 429
>ref|XP_002302838.2| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|550345575|gb|EEE82111.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 391
Score = 276 bits (707), Expect = 4e-72
Identities = 137/188 (72%), Positives = 160/188 (85%), Gaps = 3/188 (1%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+E++ELL+ ++G P+SIA+LP +YYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 209 LELTELLKSRRGVPVSIASLPMMYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 268
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
++RLIDRPHGQH+++LAED +Y EY GE GG A GSRQIYLTFPAESTFTE
Sbjct: 269 SIRLIDRPHGQHSVILAEDFPKYLEYAGERNDPGGIVA-----GSRQIYLTFPAESTFTE 323
Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
+DVSNYF +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH +CG+RVLVKPY+
Sbjct: 324 QDVSNYFSNFGPVQDVRIPCQQKRMFGFVTFVFAETVKKILAKGNPHHICGARVLVKPYR 383
Query: 679 EKGKLADR 702
EK +L DR
Sbjct: 384 EKSRLIDR 391
>ref|XP_001771275.1| predicted protein [Physcomitrella patens]
gi|162677364|gb|EDQ63835.1| predicted protein
[Physcomitrella patens]
Length = 386
Score = 275 bits (703), Expect(2) = 7e-72
Identities = 139/186 (74%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+E+ ELL+ ++ +P+SIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 203 IELQELLRGRR-APVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 261
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
TV LIDRPHGQHA+VLAEDA R+T Y+ + G + N SRQIYLTFPAESTFTEED
Sbjct: 262 TVTLIDRPHGQHAVVLAEDAHRFTAYRSDHRGEDLSGI-NPSSRQIYLTFPAESTFTEED 320
Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
V+ +FR YGPVQDVRIPYQQKRMFGFVTFVY ETVK IL++GNPH +CG+RVLVKPY+EK
Sbjct: 321 VTAHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREK 380
Query: 685 GKLADR 702
GK DR
Sbjct: 381 GKHGDR 386
Score = 23.1 bits (48), Expect(2) = 7e-72
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 62 SIPLIDGLDNDDLPPVLVAGSLERLEVEL 148
S + G+D+ P GSLERLE+EL
Sbjct: 182 SCRFLHGMDDGMAP-----GSLERLEIEL 205
>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Fragaria vesca subsp. vesca]
Length = 566
Score = 276 bits (705), Expect = 7e-72
Identities = 142/200 (71%), Positives = 166/200 (83%), Gaps = 3/200 (1%)
Frame = +1
Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
EI ELL+ ++G PISIA+LP +YYEK+GRTLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 238 EIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 297
Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSN-AGSRQIYLTFPAESTFTEED 504
+RLIDRPHGQH+++LAED +Y EY GE T P AGSRQIYLTFPAES FTE+D
Sbjct: 298 IRLIDRPHGQHSVILAEDIPKYLEYTGE----KTEPGGIIAGSRQIYLTFPAESNFTEQD 353
Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
VSNYF YGPVQDVRIP QQKRMFGFVTF+Y +TV+ IL+KGNPH VCG+RVLVKPY+EK
Sbjct: 354 VSNYFNKYGPVQDVRIPCQQKRMFGFVTFLYADTVRHILSKGNPHFVCGARVLVKPYREK 413
Query: 685 GKLADRKPAEK-QEFPGYSS 741
+ DRK ++K Q P ++S
Sbjct: 414 SRPVDRKFSDKMQHSPCFNS 433
>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 556
Score = 273 bits (697), Expect = 6e-71
Identities = 137/203 (67%), Positives = 166/203 (81%), Gaps = 1/203 (0%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+EI ELL+ ++G+P+SIA+LP +YYEK+G+ LQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 230 VEIIELLKSRRGNPVSIASLPAMYYEKYGKYLQAEGYLTESQRHGKAGYSLTKLLARLKN 289
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
++RLIDRPHGQHA++LAED+ ++ + + E + GSRQIYLTFPAESTFTEED
Sbjct: 290 SIRLIDRPHGQHAVILAEDSQKFFDNRSEKSDPGPIVS---GSRQIYLTFPAESTFTEED 346
Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
VSNYF T+G V+DVRIP QQKRMFGFVTF +TVK ILAKGNPH VCG+RVLVKPY+EK
Sbjct: 347 VSNYFNTFGTVEDVRIPCQQKRMFGFVTFAIADTVKMILAKGNPHFVCGARVLVKPYREK 406
Query: 685 GKLADRKPAEKQEFPGYSSLGYN 753
KL DRK +++ E P Y S Y+
Sbjct: 407 SKLVDRKYSDRFEAPVYYSPHYS 429
>ref|XP_001758251.1| predicted protein [Physcomitrella patens]
gi|162690707|gb|EDQ77073.1| predicted protein
[Physcomitrella patens]
Length = 421
Score = 271 bits (694), Expect(2) = 1e-70
Identities = 137/186 (73%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
Frame = +1
Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
+E+ ELL+ ++ +P+SIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK
Sbjct: 238 IELQELLRGRR-APVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 296
Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
TV LIDRPHGQHA+VLAEDA R+T ++ + G + N SRQIYLTFPAESTF EED
Sbjct: 297 TVTLIDRPHGQHAVVLAEDAHRFTVHRSDHRGEDLSGI-NPSSRQIYLTFPAESTFCEED 355
Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
V+++FR YGPVQDVRIPYQQKRMFGFVTFVY ETVK IL++GNPH +CG+RVLVKPY+EK
Sbjct: 356 VTSHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREK 415
Query: 685 GKLADR 702
GK DR
Sbjct: 416 GKHGDR 421
Score = 22.3 bits (46), Expect(2) = 1e-70
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 110 LVAGSLERLEVEL 148
+ GSLERLE+EL
Sbjct: 228 MAPGSLERLEIEL 240