BLASTX nr result

ID: Ephedra25_contig00005005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00005005
         (773 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A...   295   2e-77
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind...   290   5e-76
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin...   288   1e-75
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin...   288   1e-75
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr...   288   1e-75
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe...   281   1e-74
ref|XP_002320513.1| RNA recognition motif-containing family prot...   284   3e-74
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin...   283   6e-74
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin...   283   6e-74
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo...   282   8e-74
ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citr...   282   8e-74
ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citr...   282   8e-74
gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus pe...   279   9e-73
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   279   9e-73
gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-bind...   277   3e-72
ref|XP_002302838.2| RNA recognition motif-containing family prot...   276   4e-72
ref|XP_001771275.1| predicted protein [Physcomitrella patens] gi...   275   7e-72
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin...   276   7e-72
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo...   273   6e-71
ref|XP_001758251.1| predicted protein [Physcomitrella patens] gi...   271   1e-70

>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
           gi|548839320|gb|ERM99613.1| hypothetical protein
           AMTR_s00088p00158600 [Amborella trichopoda]
          Length = 575

 Score =  295 bits (754), Expect = 2e-77
 Identities = 152/200 (76%), Positives = 173/200 (86%), Gaps = 2/200 (1%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           ME+ +LL+ K+ +PISIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 250 MELLQLLRAKR-TPISIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 308

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGG-GATAPTSNAGSRQIYLTFPAESTFTEE 501
           ++RLIDRPHGQHA+VLAEDA++YTEY+ +    GA      AGSRQIYLTFPAESTFTEE
Sbjct: 309 SIRLIDRPHGQHAVVLAEDAAKYTEYRSDRNDPGAIV----AGSRQIYLTFPAESTFTEE 364

Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
           DVSNYFRT+GPVQDVRIP QQKRMFGFVTF+YPETVK IL KGNPH VCG+RVLVKPY+E
Sbjct: 365 DVSNYFRTFGPVQDVRIPCQQKRMFGFVTFMYPETVKMILNKGNPHFVCGARVLVKPYRE 424

Query: 682 KGKLADRKPAEKQEFPGYSS 741
           K +L DRK  EK + P Y S
Sbjct: 425 KSRLVDRKYPEKIDHPVYYS 444


>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
           gi|508701579|gb|EOX93475.1| CCCH-type zinc fingerfamily
           protein with RNA-binding domain, putative isoform 1
           [Theobroma cacao] gi|508701580|gb|EOX93476.1| CCCH-type
           zinc fingerfamily protein with RNA-binding domain,
           putative isoform 1 [Theobroma cacao]
          Length = 545

 Score =  290 bits (741), Expect = 5e-76
 Identities = 147/201 (73%), Positives = 168/201 (83%), Gaps = 3/201 (1%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +E++ELL+ ++G P+SIA+LP LYYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 250 LELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 309

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
           ++RLIDRPHGQH+++LAEDA +Y EY GE    GG  A     GSRQIYLTFPAESTFTE
Sbjct: 310 SIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVA-----GSRQIYLTFPAESTFTE 364

Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
           EDVSNYF  +GPVQDVRIP QQKRMFGFVTFVY ETVK ILAKGNPH VCG+RVLVKPY+
Sbjct: 365 EDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVKPYR 424

Query: 679 EKGKLADRKPAEKQEFPGYSS 741
           EK ++ DRK  EK + P Y S
Sbjct: 425 EKSRVVDRKFTEKVQQPMYYS 445


>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X4 [Citrus sinensis]
          Length = 578

 Score =  288 bits (737), Expect = 1e-75
 Identities = 146/203 (71%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
 Frame = +1

Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
           EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309

Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEE 501
           +RLIDRPHGQH+++LAED   Y EY GE    GG  A     GSRQIYLTFPAESTFTE+
Sbjct: 310 IRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQ 364

Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
           DVSNYF  +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+E
Sbjct: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424

Query: 682 KGKLADRKPAEKQEFPGYSSLGY 750
           K +L DRK  EK + P + SL +
Sbjct: 425 KSRLVDRKYVEKMQHPLFCSLHF 447


>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X3 [Citrus sinensis]
          Length = 579

 Score =  288 bits (737), Expect = 1e-75
 Identities = 146/203 (71%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
 Frame = +1

Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
           EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309

Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEE 501
           +RLIDRPHGQH+++LAED   Y EY GE    GG  A     GSRQIYLTFPAESTFTE+
Sbjct: 310 IRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQ 364

Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
           DVSNYF  +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+E
Sbjct: 365 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 424

Query: 682 KGKLADRKPAEKQEFPGYSSLGY 750
           K +L DRK  EK + P + SL +
Sbjct: 425 KSRLVDRKYVEKMQHPLFCSLHF 447


>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
           gi|557550378|gb|ESR61007.1| hypothetical protein
           CICLE_v10014902mg [Citrus clementina]
          Length = 524

 Score =  288 bits (737), Expect = 1e-75
 Identities = 146/203 (71%), Positives = 168/203 (82%), Gaps = 3/203 (1%)
 Frame = +1

Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
           EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 195 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 254

Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTEE 501
           +RLIDRPHGQH+++LAED   Y EY GE    GG  A     GSRQIYLTFPAESTFTE+
Sbjct: 255 IRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTFTEQ 309

Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
           DVSNYF  +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKPY+E
Sbjct: 310 DVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYRE 369

Query: 682 KGKLADRKPAEKQEFPGYSSLGY 750
           K +L DRK  EK + P + SL +
Sbjct: 370 KSRLVDRKYVEKMQHPLFCSLHF 392


>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
          Length = 565

 Score =  281 bits (719), Expect(2) = 1e-74
 Identities = 142/194 (73%), Positives = 164/194 (84%), Gaps = 2/194 (1%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +EI ELL+ ++G PISIA+LP +YYEK+GRTLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 235 IEIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 294

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSN-AGSRQIYLTFPAESTFTEE 501
           ++RL+DRPHGQH+++LAED  +Y EY GE     T P    AGSRQIYLTFPAES FTE+
Sbjct: 295 SIRLLDRPHGQHSVILAEDIPKYLEYAGE----KTEPGGIIAGSRQIYLTFPAESNFTEQ 350

Query: 502 DVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKE 681
           DVSNYF  YGPVQDVRIP QQKRMFGFVTFVY ETV+ IL+KGNPH VCG+RVLVKPY+E
Sbjct: 351 DVSNYFNKYGPVQDVRIPCQQKRMFGFVTFVYAETVRHILSKGNPHFVCGARVLVKPYRE 410

Query: 682 KGKLADRKPAEKQE 723
           K +L DRK +EK +
Sbjct: 411 KSRLVDRKFSEKMQ 424



 Score = 25.8 bits (55), Expect(2) = 1e-74
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 62  SIPLIDGLDNDDLPPVLVAGSLERLEVEL 148
           S P ++ L NDD   V+  GSLE+LE+E+
Sbjct: 211 SHPNLNELSNDD--HVVSPGSLEKLEIEI 237


>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222861286|gb|EEE98828.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 554

 Score =  284 bits (726), Expect = 3e-74
 Identities = 142/201 (70%), Positives = 167/201 (83%), Gaps = 3/201 (1%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +E++ELL+ ++G P+SIA+LP +YYEK+GR LQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 226 LELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYSLTKLLARLKN 285

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
           ++RLIDRPHGQH+++L ED  +Y EY GE    GG  A     GSRQIYLTFPAESTFTE
Sbjct: 286 SIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVA-----GSRQIYLTFPAESTFTE 340

Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
           +DVSNYF  +GPVQDVRIP QQKRMFGFVTFV+ ETVK IL+KGNPH VCG+RVLVKPY+
Sbjct: 341 QDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYR 400

Query: 679 EKGKLADRKPAEKQEFPGYSS 741
           EK +L DRK AEK + P + S
Sbjct: 401 EKSRLVDRKYAEKIQHPFFYS 421


>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X2 [Citrus sinensis]
          Length = 581

 Score =  283 bits (723), Expect = 6e-74
 Identities = 146/206 (70%), Positives = 168/206 (81%), Gaps = 6/206 (2%)
 Frame = +1

Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
           EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309

Query: 328 VRLIDR---PHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTF 492
           +RLIDR   PHGQH+++LAED   Y EY GE    GG  A     GSRQIYLTFPAESTF
Sbjct: 310 IRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTF 364

Query: 493 TEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKP 672
           TE+DVSNYF  +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKP
Sbjct: 365 TEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 424

Query: 673 YKEKGKLADRKPAEKQEFPGYSSLGY 750
           Y+EK +L DRK  EK + P + SL +
Sbjct: 425 YREKSRLVDRKYVEKMQHPLFCSLHF 450


>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           isoform X1 [Citrus sinensis]
          Length = 582

 Score =  283 bits (723), Expect = 6e-74
 Identities = 146/206 (70%), Positives = 168/206 (81%), Gaps = 6/206 (2%)
 Frame = +1

Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
           EI+ELL+ ++G PISIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 250 EITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 309

Query: 328 VRLIDR---PHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTF 492
           +RLIDR   PHGQH+++LAED   Y EY GE    GG  A     GSRQIYLTFPAESTF
Sbjct: 310 IRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVA-----GSRQIYLTFPAESTF 364

Query: 493 TEEDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKP 672
           TE+DVSNYF  +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH VCG+RVLVKP
Sbjct: 365 TEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKP 424

Query: 673 YKEKGKLADRKPAEKQEFPGYSSLGY 750
           Y+EK +L DRK  EK + P + SL +
Sbjct: 425 YREKSRLVDRKYVEKMQHPLFCSLHF 450


>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 557

 Score =  282 bits (722), Expect = 8e-74
 Identities = 139/191 (72%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           MEI ELL+ + GSP+SIA+LP +YYEK+GR+LQAEGYLTESQRHGK GYSLTKLLARLK 
Sbjct: 229 MEIVELLRSRIGSPVSIASLPMMYYEKYGRSLQAEGYLTESQRHGKTGYSLTKLLARLKH 288

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
           ++R++DRPHGQH+++LAED  RY +Y GE        +   GSRQIYLTFPAESTFTE+D
Sbjct: 289 SIRIVDRPHGQHSVILAEDVPRYLDYAGEKNEPGVIVS---GSRQIYLTFPAESTFTEQD 345

Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
           VSNYF  +GPVQDVRIP QQKRMFGFVTFVYPETV+ IL+KGNPH VCG+RVLVKPY+EK
Sbjct: 346 VSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYPETVRQILSKGNPHFVCGARVLVKPYREK 405

Query: 685 GKLADRKPAEK 717
            +L DRK AEK
Sbjct: 406 SRLVDRKFAEK 416


>ref|XP_006452534.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
           gi|567921060|ref|XP_006452536.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|567921062|ref|XP_006452537.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555760|gb|ESR65774.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555762|gb|ESR65776.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555763|gb|ESR65777.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
          Length = 547

 Score =  282 bits (722), Expect = 8e-74
 Identities = 145/202 (71%), Positives = 163/202 (80%), Gaps = 1/202 (0%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +EI ELL+ ++G+PISIA+LP LYYEK+G+ LQA GYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 239 LEIIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKN 298

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
           +VRLIDRPHGQHA++LAEDA +Y E + E        T   GSRQIYLTFPAESTFTE+D
Sbjct: 299 SVRLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVT---GSRQIYLTFPAESTFTEDD 355

Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
           VSNYF TYGPV DVRIP QQKRMFGFVTF   +TVK ILAKGNPH VCG+RVLVKPY+EK
Sbjct: 356 VSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREK 415

Query: 685 GKLADRKPAEKQEFPGYSSLGY 750
            KL DRK  E+ E P Y S  Y
Sbjct: 416 SKLVDRKYQERMESPMYFSPQY 437


>ref|XP_006452532.1| hypothetical protein CICLE_v10007876mg [Citrus clementina]
           gi|567921054|ref|XP_006452533.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|567921058|ref|XP_006452535.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|568841990|ref|XP_006474936.1| PREDICTED: zinc finger
           CCCH domain-containing protein 18-like isoform X1
           [Citrus sinensis] gi|568841992|ref|XP_006474937.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           18-like isoform X2 [Citrus sinensis]
           gi|557555758|gb|ESR65772.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555759|gb|ESR65773.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
           gi|557555761|gb|ESR65775.1| hypothetical protein
           CICLE_v10007876mg [Citrus clementina]
          Length = 565

 Score =  282 bits (722), Expect = 8e-74
 Identities = 145/202 (71%), Positives = 163/202 (80%), Gaps = 1/202 (0%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +EI ELL+ ++G+PISIA+LP LYYEK+G+ LQA GYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 239 LEIIELLKARRGNPISIASLPMLYYEKYGKVLQAGGYLTESQRHGKAGYSLTKLLARLKN 298

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
           +VRLIDRPHGQHA++LAEDA +Y E + E        T   GSRQIYLTFPAESTFTE+D
Sbjct: 299 SVRLIDRPHGQHAVILAEDAPKYLENRNERSDPGPIVT---GSRQIYLTFPAESTFTEDD 355

Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
           VSNYF TYGPV DVRIP QQKRMFGFVTF   +TVK ILAKGNPH VCG+RVLVKPY+EK
Sbjct: 356 VSNYFNTYGPVDDVRIPCQQKRMFGFVTFASADTVKMILAKGNPHFVCGARVLVKPYREK 415

Query: 685 GKLADRKPAEKQEFPGYSSLGY 750
            KL DRK  E+ E P Y S  Y
Sbjct: 416 SKLVDRKYQERMESPMYFSPQY 437


>gb|EMJ15058.1| hypothetical protein PRUPE_ppa019338mg [Prunus persica]
          Length = 564

 Score =  279 bits (713), Expect = 9e-73
 Identities = 138/198 (69%), Positives = 166/198 (83%), Gaps = 1/198 (0%)
 Frame = +1

Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARL-KT 327
           EI+ELL+ ++G PISIA+LP +YY+KFG++LQAEGYLTESQRHGKAGYSLTKLLARL  +
Sbjct: 239 EITELLRSRRGIPISIASLPMMYYDKFGKSLQAEGYLTESQRHGKAGYSLTKLLARLGSS 298

Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEEDV 507
           +RLIDRPHGQHA++LAED+ +Y +++ E G      +   GSRQIYLTFPAESTF+E+DV
Sbjct: 299 IRLIDRPHGQHAVILAEDSPKYADHRNEKGDPGPIVS---GSRQIYLTFPAESTFSEDDV 355

Query: 508 SNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEKG 687
           SNYF T+GPV+DVRIP QQKRMFGFVTFV+ +TVK ILAKGNPH VCGSRVLVKPY+EK 
Sbjct: 356 SNYFSTFGPVEDVRIPCQQKRMFGFVTFVHADTVKMILAKGNPHYVCGSRVLVKPYREKS 415

Query: 688 KLADRKPAEKQEFPGYSS 741
           KL DRK  E+ +   Y S
Sbjct: 416 KLVDRKHQERMDPAAYLS 433


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  279 bits (713), Expect = 9e-73
 Identities = 140/201 (69%), Positives = 166/201 (82%), Gaps = 3/201 (1%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           ME++ELL+ ++G P+SIA+LP +YYEK+G+TLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 252 MELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 311

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
           ++R+IDRPHGQH+++L ED  +Y EY GE    GG  A     GSRQIYLTFPAES FTE
Sbjct: 312 SIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVA-----GSRQIYLTFPAESIFTE 366

Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
            DVS YF  +GPVQDVRIP QQKRMFGFVTF++ ETVK ILAKGNPH VCG+RVLVKPY+
Sbjct: 367 HDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGARVLVKPYR 426

Query: 679 EKGKLADRKPAEKQEFPGYSS 741
           EK +L DRK +EK + P Y+S
Sbjct: 427 EKSRLIDRKFSEKLQHPMYNS 447


>gb|EOX93477.1| CCCH-type zinc fingerfamily protein with RNA-binding domain,
           putative isoform 4, partial [Theobroma cacao]
          Length = 430

 Score =  277 bits (709), Expect = 3e-72
 Identities = 139/185 (75%), Positives = 159/185 (85%), Gaps = 3/185 (1%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +E++ELL+ ++G P+SIA+LP LYYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 250 LELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 309

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
           ++RLIDRPHGQH+++LAEDA +Y EY GE    GG  A     GSRQIYLTFPAESTFTE
Sbjct: 310 SIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVA-----GSRQIYLTFPAESTFTE 364

Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
           EDVSNYF  +GPVQDVRIP QQKRMFGFVTFVY ETVK ILAKGNPH VCG+RVLVKPY+
Sbjct: 365 EDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCGARVLVKPYR 424

Query: 679 EKGKL 693
           EK ++
Sbjct: 425 EKSRV 429


>ref|XP_002302838.2| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|550345575|gb|EEE82111.2| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 391

 Score =  276 bits (707), Expect = 4e-72
 Identities = 137/188 (72%), Positives = 160/188 (85%), Gaps = 3/188 (1%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +E++ELL+ ++G P+SIA+LP +YYE +GRTLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 209 LELTELLKSRRGVPVSIASLPMMYYEMYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKN 268

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGG--GGATAPTSNAGSRQIYLTFPAESTFTE 498
           ++RLIDRPHGQH+++LAED  +Y EY GE    GG  A     GSRQIYLTFPAESTFTE
Sbjct: 269 SIRLIDRPHGQHSVILAEDFPKYLEYAGERNDPGGIVA-----GSRQIYLTFPAESTFTE 323

Query: 499 EDVSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYK 678
           +DVSNYF  +GPVQDVRIP QQKRMFGFVTFV+ ETVK ILAKGNPH +CG+RVLVKPY+
Sbjct: 324 QDVSNYFSNFGPVQDVRIPCQQKRMFGFVTFVFAETVKKILAKGNPHHICGARVLVKPYR 383

Query: 679 EKGKLADR 702
           EK +L DR
Sbjct: 384 EKSRLIDR 391


>ref|XP_001771275.1| predicted protein [Physcomitrella patens]
           gi|162677364|gb|EDQ63835.1| predicted protein
           [Physcomitrella patens]
          Length = 386

 Score =  275 bits (703), Expect(2) = 7e-72
 Identities = 139/186 (74%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +E+ ELL+ ++ +P+SIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 203 IELQELLRGRR-APVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 261

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
           TV LIDRPHGQHA+VLAEDA R+T Y+ +  G   +   N  SRQIYLTFPAESTFTEED
Sbjct: 262 TVTLIDRPHGQHAVVLAEDAHRFTAYRSDHRGEDLSGI-NPSSRQIYLTFPAESTFTEED 320

Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
           V+ +FR YGPVQDVRIPYQQKRMFGFVTFVY ETVK IL++GNPH +CG+RVLVKPY+EK
Sbjct: 321 VTAHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREK 380

Query: 685 GKLADR 702
           GK  DR
Sbjct: 381 GKHGDR 386



 Score = 23.1 bits (48), Expect(2) = 7e-72
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 62  SIPLIDGLDNDDLPPVLVAGSLERLEVEL 148
           S   + G+D+   P     GSLERLE+EL
Sbjct: 182 SCRFLHGMDDGMAP-----GSLERLEIEL 205


>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Fragaria vesca subsp. vesca]
          Length = 566

 Score =  276 bits (705), Expect = 7e-72
 Identities = 142/200 (71%), Positives = 166/200 (83%), Gaps = 3/200 (1%)
 Frame = +1

Query: 151 EISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK-T 327
           EI ELL+ ++G PISIA+LP +YYEK+GRTLQAEGYLTESQRHGKAGYSLTKLLARLK +
Sbjct: 238 EIIELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNS 297

Query: 328 VRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSN-AGSRQIYLTFPAESTFTEED 504
           +RLIDRPHGQH+++LAED  +Y EY GE     T P    AGSRQIYLTFPAES FTE+D
Sbjct: 298 IRLIDRPHGQHSVILAEDIPKYLEYTGE----KTEPGGIIAGSRQIYLTFPAESNFTEQD 353

Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
           VSNYF  YGPVQDVRIP QQKRMFGFVTF+Y +TV+ IL+KGNPH VCG+RVLVKPY+EK
Sbjct: 354 VSNYFNKYGPVQDVRIPCQQKRMFGFVTFLYADTVRHILSKGNPHFVCGARVLVKPYREK 413

Query: 685 GKLADRKPAEK-QEFPGYSS 741
            +  DRK ++K Q  P ++S
Sbjct: 414 SRPVDRKFSDKMQHSPCFNS 433


>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 556

 Score =  273 bits (697), Expect = 6e-71
 Identities = 137/203 (67%), Positives = 166/203 (81%), Gaps = 1/203 (0%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +EI ELL+ ++G+P+SIA+LP +YYEK+G+ LQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 230 VEIIELLKSRRGNPVSIASLPAMYYEKYGKYLQAEGYLTESQRHGKAGYSLTKLLARLKN 289

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
           ++RLIDRPHGQHA++LAED+ ++ + + E        +   GSRQIYLTFPAESTFTEED
Sbjct: 290 SIRLIDRPHGQHAVILAEDSQKFFDNRSEKSDPGPIVS---GSRQIYLTFPAESTFTEED 346

Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
           VSNYF T+G V+DVRIP QQKRMFGFVTF   +TVK ILAKGNPH VCG+RVLVKPY+EK
Sbjct: 347 VSNYFNTFGTVEDVRIPCQQKRMFGFVTFAIADTVKMILAKGNPHFVCGARVLVKPYREK 406

Query: 685 GKLADRKPAEKQEFPGYSSLGYN 753
            KL DRK +++ E P Y S  Y+
Sbjct: 407 SKLVDRKYSDRFEAPVYYSPHYS 429


>ref|XP_001758251.1| predicted protein [Physcomitrella patens]
           gi|162690707|gb|EDQ77073.1| predicted protein
           [Physcomitrella patens]
          Length = 421

 Score =  271 bits (694), Expect(2) = 1e-70
 Identities = 137/186 (73%), Positives = 161/186 (86%), Gaps = 1/186 (0%)
 Frame = +1

Query: 148 MEISELLQIKKGSPISIAALPQLYYEKFGRTLQAEGYLTESQRHGKAGYSLTKLLARLK- 324
           +E+ ELL+ ++ +P+SIA+LPQLYYE+FG+TLQAEGYLTESQRHGKAGYSLTKLLARLK 
Sbjct: 238 IELQELLRGRR-APVSIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKN 296

Query: 325 TVRLIDRPHGQHAIVLAEDASRYTEYKGEGGGGATAPTSNAGSRQIYLTFPAESTFTEED 504
           TV LIDRPHGQHA+VLAEDA R+T ++ +  G   +   N  SRQIYLTFPAESTF EED
Sbjct: 297 TVTLIDRPHGQHAVVLAEDAHRFTVHRSDHRGEDLSGI-NPSSRQIYLTFPAESTFCEED 355

Query: 505 VSNYFRTYGPVQDVRIPYQQKRMFGFVTFVYPETVKTILAKGNPHDVCGSRVLVKPYKEK 684
           V+++FR YGPVQDVRIPYQQKRMFGFVTFVY ETVK IL++GNPH +CG+RVLVKPY+EK
Sbjct: 356 VTSHFRAYGPVQDVRIPYQQKRMFGFVTFVYSETVKAILSEGNPHYICGARVLVKPYREK 415

Query: 685 GKLADR 702
           GK  DR
Sbjct: 416 GKHGDR 421



 Score = 22.3 bits (46), Expect(2) = 1e-70
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 110 LVAGSLERLEVEL 148
           +  GSLERLE+EL
Sbjct: 228 MAPGSLERLEIEL 240


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