BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00004485
         (888 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...   363   e-110
ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   360   e-110
ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   358   e-109
ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   358   e-109
ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   358   e-109
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic...   353   e-109
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   356   e-109
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr...   356   e-109
emb|CAE52834.1| RNA polymerase [Hordeum vulgare]                      352   e-109
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   357   e-108
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/...   354   e-108
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   357   e-108
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A...   351   e-108
ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   355   e-108
ref|XP_004156222.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   355   e-108
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom...   354   e-108
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   355   e-108
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   352   e-108
emb|CBL69150.1| RNA polymerase [Nuphar advena]                        345   e-108
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   350   e-108

>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  363 bits (931), Expect(2) = e-110
 Identities = 180/248 (72%), Positives = 206/248 (83%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI+L++AL+SSSPE FI HIPVHQDGSCNGLQHYAALGRDKLGA +VNL  GE
Sbjct: 694  PFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGE 753

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+A RV EIMRRDA KD   F  A  A+ L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 754  KPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDRKLVKQTVMTSVYGVTYI 813

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE  + SDD E+F  + Y A++TLTALGEMFEAARGIMSWL +CAKIIAS
Sbjct: 814  GARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIAS 873

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K    ++ TSLQVL L+ E+ KV  ++QRTAFPPNFVHSL
Sbjct: 874  ENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSL 933

Query: 863  DSSHMMMT 886
            DSSHMMMT
Sbjct: 934  DSSHMMMT 941



 Score = 65.1 bits (157), Expect(2) = e-110
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           LSWLKIHLANLY  GVDKLS +GR+AF E+++ +I DS ++PL
Sbjct: 640 LSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFDSVDKPL 682


>ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
          Length = 1046

 Score =  360 bits (923), Expect(2) = e-110
 Identities = 180/248 (72%), Positives = 204/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            P Q LA CI+L++AL+SSSPE FI HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 716  PLQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVTGE 775

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV  IM+RDA KD A F+ A  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 776  KPADVYSGIAARVSNIMQRDAQKDPAVFRDALHARTLVNQVDRKLVKQTVMTSVYGVTYI 835

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE    SDD+ELF AS Y A+VTLTAL EMF+ ARGIMSWL  CAK+IAS
Sbjct: 836  GAREQIKRRLKERNAISDDKELFGASCYAAKVTLTALEEMFQGARGIMSWLGDCAKVIAS 895

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K    ++ TSLQ+L L+ E++KV   +QRTAFPPNFVHSL
Sbjct: 896  ENQPVRWTTPLGLPVVQPYRKLGKHIIKTSLQILTLQRETDKVMVTRQRTAFPPNFVHSL 955

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 956  DGSHMMMT 963



 Score = 65.9 bits (159), Expect(2) = e-110
 Identities = 29/43 (67%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS++GRLAF E++  +I DSA++PL
Sbjct: 662 LRWLKIHLANLYAGGVDKLSYEGRLAFTENHFEDIFDSADKPL 704


>ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like isoform X1 [Cicer
            arietinum]
          Length = 1126

 Score =  358 bits (918), Expect(2) = e-109
 Identities = 180/248 (72%), Positives = 204/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LAACI+L++AL+SS+PE F+ HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 796  PFQCLAACITLTEALRSSAPEEFMSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 855

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EIMRRDA KD   F  A  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 856  KPADVYSGIAARVFEIMRRDAQKDPTVFSDARHARALVNQVDRKLVKQTVMTSVYGVTYI 915

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE  T  DD ELF AS Y A+VTLTAL EMF+ AR IM+WL  CAK+IAS
Sbjct: 916  GAREQIKRRLKERNTILDDSELFGASCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIAS 975

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K    +V TSLQ+L L+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 976  ENQPVRWTTPLGLPVVQPYRKLGRHIVKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSL 1035

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 1036 DGSHMMMT 1043



 Score = 65.5 bits (158), Expect(2) = e-109
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS +GR+AFVE+++ +I DSAE+P+
Sbjct: 742 LYWLKIHLANLYAGGVDKLSSEGRIAFVENHLDDIFDSAEKPM 784


>ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like isoform X2 [Cicer
            arietinum]
          Length = 1090

 Score =  358 bits (918), Expect(2) = e-109
 Identities = 180/248 (72%), Positives = 204/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LAACI+L++AL+SS+PE F+ HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 760  PFQCLAACITLTEALRSSAPEEFMSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 819

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EIMRRDA KD   F  A  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 820  KPADVYSGIAARVFEIMRRDAQKDPTVFSDARHARALVNQVDRKLVKQTVMTSVYGVTYI 879

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE  T  DD ELF AS Y A+VTLTAL EMF+ AR IM+WL  CAK+IAS
Sbjct: 880  GAREQIKRRLKERNTILDDSELFGASCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIAS 939

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K    +V TSLQ+L L+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 940  ENQPVRWTTPLGLPVVQPYRKLGRHIVKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSL 999

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 1000 DGSHMMMT 1007



 Score = 65.5 bits (158), Expect(2) = e-109
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS +GR+AFVE+++ +I DSAE+P+
Sbjct: 706 LYWLKIHLANLYAGGVDKLSSEGRIAFVENHLDDIFDSAEKPM 748


>ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like isoform X3 [Cicer
            arietinum]
          Length = 1053

 Score =  358 bits (918), Expect(2) = e-109
 Identities = 180/248 (72%), Positives = 204/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LAACI+L++AL+SS+PE F+ HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 723  PFQCLAACITLTEALRSSAPEEFMSHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 782

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EIMRRDA KD   F  A  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 783  KPADVYSGIAARVFEIMRRDAQKDPTVFSDARHARALVNQVDRKLVKQTVMTSVYGVTYI 842

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE  T  DD ELF AS Y A+VTLTAL EMF+ AR IM+WL  CAK+IAS
Sbjct: 843  GAREQIKRRLKERNTILDDSELFGASCYAAKVTLTALEEMFQGARSIMNWLGDCAKVIAS 902

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K    +V TSLQ+L L+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 903  ENQPVRWTTPLGLPVVQPYRKLGRHIVKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSL 962

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 963  DGSHMMMT 970



 Score = 65.5 bits (158), Expect(2) = e-109
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS +GR+AFVE+++ +I DSAE+P+
Sbjct: 669 LYWLKIHLANLYAGGVDKLSSEGRIAFVENHLDDIFDSAEKPM 711


>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
          Length = 1005

 Score =  353 bits (906), Expect(2) = e-109
 Identities = 177/248 (71%), Positives = 201/248 (81%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA C+ L++AL+S SPE  I HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 675  PFQCLAVCMDLNEALRSPSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGE 734

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EIM+RDA KD A    A  AR L  QV RKLVKQTVMTSVYGVT++
Sbjct: 735  KPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQVDRKLVKQTVMTSVYGVTYV 794

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE    +DD ELF AS Y A+VTLTALGEMFEAAR IM+WL  CAK+IA 
Sbjct: 795  GAREQIKRRLKERGVIADDSELFGASCYAAKVTLTALGEMFEAARSIMTWLGDCAKVIAC 854

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K    ++ TSLQVL L+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 855  ENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSL 914

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 915  DGSHMMMT 922



 Score = 70.1 bits (170), Expect(2) = e-109
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLYG GVDKLS+DGR+AF E+++ +I DSA RPL
Sbjct: 621 LRWLKIHLANLYGGGVDKLSYDGRIAFTENHLDDIFDSANRPL 663


>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Citrus
            sinensis]
          Length = 980

 Score =  356 bits (914), Expect(2) = e-109
 Identities = 176/248 (70%), Positives = 203/248 (81%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI+LS+AL+S SPE+ I HIPVH DGSCNGLQHYAALGRDKLGA AVNL  G+
Sbjct: 650  PFQCLATCINLSEALRSPSPESTISHIPVHMDGSCNGLQHYAALGRDKLGAAAVNLVGGD 709

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EIMR DA KD AT+ YA  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 710  KPADVYSGIAARVLEIMRADADKDPATYPYASCARLLINQVDRKLVKQTVMTSVYGVTYI 769

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIK+R+KE     DD +LF A+ Y A+ TLTALGEMFEAAR IMSWL +CAK+IAS
Sbjct: 770  GARDQIKKRLKERCAIEDDSKLFGAACYAAKTTLTALGEMFEAARSIMSWLGECAKVIAS 829

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY +    ++ TSLQ LAL+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 830  ENQAVRWTTPLGLPVVQPYHQLGRHLIRTSLQTLALQRETDKVMVKRQRTAFPPNFVHSL 889

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 890  DGSHMMMT 897



 Score = 66.6 bits (161), Expect(2) = e-109
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS++GR+AF E+++ +I DSA+RPL
Sbjct: 596 LHWLKIHLANLYAGGVDKLSYEGRVAFTENHLDDIFDSADRPL 638


>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
            gi|557540028|gb|ESR51072.1| hypothetical protein
            CICLE_v10030633mg [Citrus clementina]
          Length = 980

 Score =  356 bits (914), Expect(2) = e-109
 Identities = 176/248 (70%), Positives = 203/248 (81%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI+LS+AL+S SPE+ I HIPVH DGSCNGLQHYAALGRDKLGA AVNL  G+
Sbjct: 650  PFQCLATCINLSEALRSPSPESTISHIPVHMDGSCNGLQHYAALGRDKLGAAAVNLVGGD 709

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EIMR DA KD AT+ YA  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 710  KPADVYSGIAARVLEIMRADADKDPATYPYASCARLLINQVDRKLVKQTVMTSVYGVTYI 769

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIK+R+KE     DD +LF A+ Y A+ TLTALGEMFEAAR IMSWL +CAK+IAS
Sbjct: 770  GARDQIKKRLKERCAIEDDSKLFGAACYAAKTTLTALGEMFEAARSIMSWLGECAKVIAS 829

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY +    ++ TSLQ LAL+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 830  ENQAVRWTTPLGLPVVQPYHQLGRHLIRTSLQTLALQRETDKVMVKRQRTAFPPNFVHSL 889

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 890  DGSHMMMT 897



 Score = 66.6 bits (161), Expect(2) = e-109
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS++GR+AF E+++ +I DSA+RPL
Sbjct: 596 LHWLKIHLANLYAGGVDKLSYEGRVAFTENHLDDIFDSADRPL 638


>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
          Length = 862

 Score =  352 bits (902), Expect(2) = e-109
 Identities = 176/248 (70%), Positives = 201/248 (81%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA C+ L++AL+SSSPE  I HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 532  PFQCLAVCMDLNEALRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAVAVNLVSGE 591

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EIM+RDA KD A    A  AR L  QV R+LVKQTVMTSVYGVT++
Sbjct: 592  KPADVYSGIAARVVEIMKRDAQKDPAKDADAARARLLVDQVDRRLVKQTVMTSVYGVTYV 651

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE    +DD ELF AS Y A+VTLTALGEMFEAAR IM+WL  CAK+IA 
Sbjct: 652  GAREQIKRRLKERGVIADDSELFGASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIAC 711

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRW +PLGLP+VQPY+K    ++ TSLQVL L+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 712  ENEPVRWKTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSL 771

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 772  DGSHMMMT 779



 Score = 70.1 bits (170), Expect(2) = e-109
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLYG GVDKLS+DGR+AF E+++ +I DSA RPL
Sbjct: 478 LRWLKIHLANLYGGGVDKLSYDGRIAFTENHLEDIFDSANRPL 520


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  357 bits (916), Expect(2) = e-108
 Identities = 178/248 (71%), Positives = 204/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI+LS+A++SSSPE  I HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 689  PFQCLAVCINLSEAVRSSSPETVISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 748

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV +IM RDA +D A F  A  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 749  KPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYI 808

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE    +DD ELF A+SY A+VTLTALGEMFEAAR IM+WL +CAKIIAS
Sbjct: 809  GARDQIKRRLKERGAIADDSELFGAASYAAKVTLTALGEMFEAARSIMTWLAECAKIIAS 868

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K     + TSLQ+L L+ E+ KV  ++QRTAFPPNF+HSL
Sbjct: 869  ENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSL 928

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 929  DGSHMMMT 936



 Score = 64.3 bits (155), Expect(2) = e-108
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANL+  GVDKLS DGR+AF E ++ +I DSA++PL
Sbjct: 635 LRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPL 677


>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
            DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 589

 Score =  354 bits (909), Expect(2) = e-108
 Identities = 176/248 (70%), Positives = 203/248 (81%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI L++AL+SSSPE FI H+P+HQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 259  PFQCLAVCIDLTEALRSSSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 318

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+A RV +IMR+DA KD   F  A  A+ L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 319  KPADVYSGIAVRVLDIMRKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTYI 378

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE    +DD E+F AS Y A+VTLTALGEMFEAAR IMSWL +CAKIIAS
Sbjct: 379  GARDQIKRRLKERGFIADDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIAS 438

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+     ++ TSLQVL L++E+ KV  ++QRTAFPPNFVHSL
Sbjct: 439  ENEPVRWTTPLGLPVVQPYRNFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSL 498

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 499  DGSHMMMT 506



 Score = 67.0 bits (162), Expect(2) = e-108
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANL+  GVDKLS+DGR+AF E+++ +I DSA+RPL
Sbjct: 205 LRWLKIHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPL 247


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  357 bits (917), Expect(2) = e-108
 Identities = 179/248 (72%), Positives = 205/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQFLAACI+LS+AL+SSSPE  I HIPVHQDGSCNGLQHYAALGRD+LGA AVNL  GE
Sbjct: 705  PFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGE 764

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV +IM+RDA KD A F  A  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 765  KPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYI 824

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE    +DD ELF A+ Y A++TLTALGEMF+AAR IMSWL  CAKIIAS
Sbjct: 825  GARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIAS 884

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K    ++ TSLQVL L+ E+  +  ++QRTAFPPNFVHSL
Sbjct: 885  ENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSL 944

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 945  DGSHMMMT 952



 Score = 62.4 bits (150), Expect(2) = e-108
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANL+  GVDKLS +GR+ F E+++ +I DSA+RPL
Sbjct: 651 LHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPL 693


>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
            gi|548846502|gb|ERN05778.1| hypothetical protein
            AMTR_s00006p00254180 [Amborella trichopoda]
          Length = 1006

 Score =  351 bits (900), Expect(2) = e-108
 Identities = 174/248 (70%), Positives = 205/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LAAC++LS+AL+SSSP+  I H+PVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 676  PFQCLAACVNLSEALRSSSPDTTISHMPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGE 735

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+A RV +IMRRD+ KD  +      A+ L  QV RKLVKQTVMTSVYGVT++
Sbjct: 736  KPADVYSGIAERVLDIMRRDSQKDPTSDPNVARAKLLLNQVDRKLVKQTVMTSVYGVTYV 795

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QI RR+KE    +D++ELF AS Y A+VTLTALGEMF+AAR IMSWL  CAK+IAS
Sbjct: 796  GARDQIMRRLKERGAITDEKELFSASCYTAKVTLTALGEMFQAARSIMSWLGDCAKVIAS 855

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN TVRWT+PLGLP+VQPY+K    ++ TSLQVLALR E++KV  ++QRTAFPPNFVHSL
Sbjct: 856  ENETVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLALRCETDKVMVKRQRTAFPPNFVHSL 915

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 916  DGSHMMMT 923



 Score = 68.9 bits (167), Expect(2) = e-108
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS+DGRL FVE+++ +I DSA+RPL
Sbjct: 622 LRWLKIHLANLYAGGVDKLSYDGRLEFVENHLEDIFDSADRPL 664


>ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 984

 Score =  355 bits (911), Expect(2) = e-108
 Identities = 177/248 (71%), Positives = 205/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQFLA C++L++AL+SSSPE +I HIP+HQDGSCNGLQHYAALGRDK GA AVNL  GE
Sbjct: 654  PFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKSGAAAVNLVAGE 713

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EI++RDA KD  TF  A  A+ L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 714  KPADVYSGIAARVLEILKRDAQKDPETFPDALHAKILIDQVDRKLVKQTVMTSVYGVTYI 773

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE A  SDD ELF  S Y A++TL ALGEMF AAR IM+WL+ CAKIIAS
Sbjct: 774  GARDQIKRRLKERAAISDDSELFGCSCYAAKITLEALGEMFVAAREIMNWLSDCAKIIAS 833

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            +N TVRWT+PLGLP+VQPY+K     + TSLQVL LR E++K+   +QRTAFPPNFVHSL
Sbjct: 834  KNETVRWTTPLGLPVVQPYRKLGIHAIKTSLQVLTLRRETDKILSSRQRTAFPPNFVHSL 893

Query: 863  DSSHMMMT 886
            DSSHMMMT
Sbjct: 894  DSSHMMMT 901



 Score = 64.7 bits (156), Expect(2) = e-108
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANL+  GVDKLS DGR+ F+E+++ +I DSA+RPL
Sbjct: 600 LIWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPL 642


>ref|XP_004156222.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 958

 Score =  355 bits (911), Expect(2) = e-108
 Identities = 177/248 (71%), Positives = 205/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQFLA C++L++AL+SSSPE +I HIP+HQDGSCNGLQHYAALGRDK GA AVNL  GE
Sbjct: 654  PFQFLAGCMNLTEALRSSSPETYISHIPIHQDGSCNGLQHYAALGRDKSGAAAVNLVAGE 713

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV EI++RDA KD  TF  A  A+ L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 714  KPADVYSGIAARVLEILKRDAQKDPETFPDALHAKILIDQVDRKLVKQTVMTSVYGVTYI 773

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE A  SDD ELF  S Y A++TL ALGEMF AAR IM+WL+ CAKIIAS
Sbjct: 774  GARDQIKRRLKERAAISDDSELFGCSCYAAKITLEALGEMFVAAREIMNWLSDCAKIIAS 833

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            +N TVRWT+PLGLP+VQPY+K     + TSLQVL LR E++K+   +QRTAFPPNFVHSL
Sbjct: 834  KNETVRWTTPLGLPVVQPYRKLGIHAIKTSLQVLTLRRETDKILSSRQRTAFPPNFVHSL 893

Query: 863  DSSHMMMT 886
            DSSHMMMT
Sbjct: 894  DSSHMMMT 901



 Score = 64.7 bits (156), Expect(2) = e-108
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANL+  GVDKLS DGR+ F+E+++ +I DSA+RPL
Sbjct: 600 LIWLKIHLANLFAGGVDKLSHDGRMTFIENHLEDIFDSADRPL 642


>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1100

 Score =  354 bits (909), Expect(2) = e-108
 Identities = 175/248 (70%), Positives = 205/248 (82%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI+L++AL+SSSPE F+ HIPVHQDGSCNGLQHYAALGRDKLGA +VNL  GE
Sbjct: 706  PFQCLAVCINLAEALRSSSPETFVSHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGE 765

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV +I+RRDA KD A F  A  A+ L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 766  KPADVYSGIAARVLDIIRRDAQKDPAVFPDALHAKVLVNQVDRKLVKQTVMTSVYGVTYI 825

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE    +DD+E+F AS Y A+ TLTALGEMF+AAR IM+WL +CAKIIAS
Sbjct: 826  GARDQIKRRLKERGVITDDKEIFGASCYAAKTTLTALGEMFQAARAIMNWLGECAKIIAS 885

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+     ++ TSLQVL L+ E+ KV  ++QRTAFPPNFVHSL
Sbjct: 886  ENQPVRWTTPLGLPVVQPYRVLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSL 945

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 946  DGSHMMMT 953



 Score = 65.1 bits (157), Expect(2) = e-108
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS  GRLAF E+++ +I DSA+RPL
Sbjct: 652 LRWLKIHLANLYAGGVDKLSHGGRLAFAENHLDDIFDSADRPL 694


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  355 bits (911), Expect(2) = e-108
 Identities = 176/248 (70%), Positives = 203/248 (81%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI+LS+A++SSSPE  I H+PVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 692  PFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGE 751

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+AARV +IM RDA +D A F  A  AR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 752  KPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYI 811

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE    +DD ELF A+ Y A+VTLTALGEMFEAAR IM+WL +CAKIIAS
Sbjct: 812  GARDQIKRRLKERGAIADDTELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIAS 871

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY+K     + TSLQ+L L+ E+ KV  ++QRTAFPPNF+HSL
Sbjct: 872  ENEPVRWTTPLGLPVVQPYRKIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSL 931

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 932  DGSHMMMT 939



 Score = 64.3 bits (155), Expect(2) = e-108
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANL+  GVDKLS DGR+AF E ++ +I DSA++PL
Sbjct: 638 LRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFDSADKPL 680


>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Brachypodium
            distachyon]
          Length = 992

 Score =  352 bits (902), Expect(2) = e-108
 Identities = 177/248 (71%), Positives = 199/248 (80%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA C+ L++AL+SSSPE  I HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 662  PFQCLAVCMDLTEALRSSSPEAMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGE 721

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVYSG+A RV EIMRRDA KD A    A  AR L  QV RKLVKQTVMTSVYGVT++
Sbjct: 722  KPADVYSGIATRVVEIMRRDAQKDPALDPDAARARLLVDQVDRKLVKQTVMTSVYGVTYV 781

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE     DD ELF AS Y A+VTLTALGEMFEAAR IM+WL  CAK+IA 
Sbjct: 782  GAREQIKRRLKERGVIGDDSELFAASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIAC 841

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRW +PLGLP+VQPY+K    ++ TSLQVL L+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 842  ENEPVRWMTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSL 901

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 902  DGSHMMMT 909



 Score = 67.8 bits (164), Expect(2) = e-108
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS+DGR+AF E+++ +I DSA RPL
Sbjct: 608 LCWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSANRPL 650


>emb|CBL69150.1| RNA polymerase [Nuphar advena]
          Length = 985

 Score =  345 bits (886), Expect(2) = e-108
 Identities = 176/248 (70%), Positives = 202/248 (81%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LAACI LS AL+SSSPE+ I HIPVH DGSCNGLQHYAALGRD+LGA +VNL  GE
Sbjct: 655  PFQCLAACIDLSXALKSSSPEDAISHIPVHLDGSCNGLQHYAALGRDRLGAASVNLVSGE 714

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +P DVYSG+AARV EI+ RD+ KD A    + LAR L  QV RKLVKQTVMTSVYGVT+I
Sbjct: 715  KPXDVYSGIAARVMEIVVRDSKKDPAVHPTSLLARILIDQVDRKLVKQTVMTSVYGVTYI 774

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAR+QIKRR+KE    +DD+ LF A+ Y A+VTL+AL EMF+AAR IMSWL  CAK+IAS
Sbjct: 775  GARDQIKRRLKERDFITDDKLLFSAACYAAKVTLSALEEMFQAARSIMSWLGDCAKVIAS 834

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  VRWT+PLGLP+VQPY KQ   +V TSLQVLAL+ ESNKV  ++Q+TAFPPNFVHSL
Sbjct: 835  ENEPVRWTTPLGLPVVQPYWKQSRHLVRTSLQVLALQRESNKVLVKRQKTAFPPNFVHSL 894

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 895  DGSHMMMT 902



 Score = 73.6 bits (179), Expect(2) = e-108
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLYG GVDKLSFDGRL FVE+++++I DSAERP+
Sbjct: 601 LRWLKIHLANLYGGGVDKLSFDGRLTFVENHLADIFDSAERPI 643


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score =  350 bits (899), Expect(2) = e-108
 Identities = 176/248 (70%), Positives = 200/248 (80%)
 Frame = +2

Query: 143  PFQFLAACISLSDALQSSSPENFICHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLTYGE 322
            PFQ LA CI+L++AL+S SPE  I HIPVHQDGSCNGLQHYAALGRDKLGA AVNL  GE
Sbjct: 509  PFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGE 568

Query: 323  RPADVYSGVAARVEEIMRRDATKDEATFKYAPLARKLCGQVSRKLVKQTVMTSVYGVTFI 502
            +PADVY+G+A RV EIMR DA KD AT   A  AR L  QV RKLVKQTVMTSVYGVT++
Sbjct: 569  KPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTYV 628

Query: 503  GAREQIKRRMKEMATFSDDEELFRASSYCAQVTLTALGEMFEAARGIMSWLNQCAKIIAS 682
            GAREQIKRR+KE     DD ELF AS Y A+VTLTALGEMF+AAR IM+WL  CAKIIA 
Sbjct: 629  GAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIAC 688

Query: 683  ENATVRWTSPLGLPIVQPYQKQKSRMVMTSLQVLALREESNKVSPRQQRTAFPPNFVHSL 862
            EN  V+WT+PLGLP+VQPY+K    ++ TSLQVL L+ E++KV  ++QRTAFPPNFVHSL
Sbjct: 689  ENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSL 748

Query: 863  DSSHMMMT 886
            D SHMMMT
Sbjct: 749  DGSHMMMT 756



 Score = 68.6 bits (166), Expect(2) = e-108
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +1

Query: 1   LSWLKIHLANLYGSGVDKLSFDGRLAFVEDNVSNIIDSAERPL 129
           L WLKIHLANLY  GVDKLS+DGR+AF E+++ +I DSA+RPL
Sbjct: 455 LRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPL 497