BLASTX nr result
ID: Ephedra25_contig00004359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00004359
(1882 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001758062.1| predicted protein [Physcomitrella patens] gi... 510 e-142
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 491 e-136
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis] 491 e-136
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe... 489 e-135
ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [A... 486 e-134
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-... 483 e-134
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob... 480 e-132
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [... 476 e-131
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t... 474 e-131
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-... 473 e-130
ref|XP_002993280.1| hypothetical protein SELMODRAFT_136810 [Sela... 473 e-130
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida] 472 e-130
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-... 471 e-130
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab... 471 e-130
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps... 471 e-130
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-... 471 e-130
ref|XP_002969897.1| hypothetical protein SELMODRAFT_30474 [Selag... 471 e-130
ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 467 e-129
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-... 466 e-128
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-... 465 e-128
>ref|XP_001758062.1| predicted protein [Physcomitrella patens] gi|162690939|gb|EDQ77304.1|
predicted protein [Physcomitrella patens]
Length = 1109
Score = 510 bits (1313), Expect = e-142
Identities = 267/411 (64%), Positives = 311/411 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEV CR ++ EQ+L+ LL +K L ++Y+SVSGTTH+I++P +VP NW
Sbjct: 643 KFPEVKNCRLAIEAIEQQLEDLLPNIRKVLKSPRLEYMSVSGTTHLIQMPVAHRVPANWI 702
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STK +RYHPPEV+ ALD L +AKE+L I AW FLAEFAS Y FRAAVQALA
Sbjct: 703 KVNSTKAMHRYHPPEVLEALDALTLAKEELSIACGRAWDAFLAEFASHYVAFRAAVQALA 762
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLAI+S NQGYV+P F+ DP +L I AGRHPVL+ATL DGFVPNDT LQ
Sbjct: 763 ALDCLHSLAIVSRNQGYVRPEFVGKCDPSQLLITAGRHPVLDATLQDGFVPNDTYLQADK 822
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQIITGPNMGGKSCYIRQVALI IMAQVGS+VPA S +LHV D VFTRMGASDSIQ G
Sbjct: 823 ERCQIITGPNMGGKSCYIRQVALITIMAQVGSYVPATSAKLHVCDAVFTRMGASDSIQKG 882
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
SSTFFEELSE S+IL +ATS SLV+IDELGRGTSTHDG AIAYATL +LKE +C+T FV
Sbjct: 883 SSTFFEELSETSSILRRATSRSLVIIDELGRGTSTHDGVAIAYATLHHLLKEIRCLTFFV 942
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP IA++K+EFP V+PYYVSYLAE L+ EEA +Q ITFL
Sbjct: 943 THYPRIADLKDEFPGNVSPYYVSYLAEE------LRYAEEA------------TQKITFL 984
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKSAA 650
YKLVPG+A RSFGLHVARLAQLP+ C+ QAA + K E E++SR A SA+
Sbjct: 985 YKLVPGVASRSFGLHVARLAQLPEVCVLQAAAKAAKLEEEVNSRTAAASAS 1035
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 491 bits (1264), Expect = e-136
Identities = 260/504 (51%), Positives = 354/504 (70%), Gaps = 6/504 (1%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEVAK R VQ A++KLD L+ ++KQL ++N++++SVSGTTH+IE+P +KVP NW
Sbjct: 637 QFPEVAKARSLVQSAKEKLDLLIGLYRKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWV 696
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPEV++ALD+L++A E+L+I AW +FL F +++F+AAVQALA
Sbjct: 697 KVNSTKKTVRYHPPEVLSALDQLSLANEELMIACRGAWDSFLRAFDKYFSEFQAAVQALA 756
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLAILS N+ YV+P F+ DS+P ++HI +GRHPVLE L D FVPNDT L G
Sbjct: 757 TLDCLHSLAILSRNKNYVRPVFVGDSEPVQMHICSGRHPVLETVLQDNFVPNDTNLHADG 816
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E C+I+TGPNMGGKSCYIRQVALI IMAQVGSFVPA S +L V D + TRMG+SDSIQ G
Sbjct: 817 EYCEIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLCVLDGIHTRMGSSDSIQQG 876
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S I++ TS SLV+IDELGRGTSTHDG AIAYATL ++L+ K+C+ LFV
Sbjct: 877 RSTFLEELSEASHIIHNCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFV 936
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+I ++KNEFP V Y+VSY+ + D + + ++ ++ +D+ + +++T+L
Sbjct: 937 THYPKIVDVKNEFPGSVGAYHVSYMMSQRAMD-MDTDTDKTDSKSDKNAQTMDHEDVTYL 995
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKSAAVPLSILPKD 623
YKLVPG+++RSFG VA+LAQLP SCI +A +M+ + E I SR SA L +
Sbjct: 996 YKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAELEAMIVSRVKNSSAQKTLQGSQQS 1055
Query: 622 VITKSICQK-EELELTKPS-----LELEIQLAHDGPRLSEILRLLESAMTESRPAEGMLA 461
+ +S C + E++ L + + L+L+ L + P S L+ L+ A + ++ G +
Sbjct: 1056 ISIQSGCSRAEQIGLEEDACREFFLDLKSALGNADPERS--LQFLKHARSIAKELIGSIG 1113
Query: 460 LQAAHELAVQQLSFTKLTKT*LRD 389
L + S T+L RD
Sbjct: 1114 FLETLHLVMGSCSSTELVPINKRD 1137
>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
Length = 1080
Score = 491 bits (1263), Expect = e-136
Identities = 260/487 (53%), Positives = 337/487 (69%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEVA+ R VQ+A++KLDSL+ ++KQL +S ++++SVSG TH+IE+ +KVP NW
Sbjct: 618 QFPEVAEARKKVQLAKEKLDSLITLYRKQLKMSKLEFISVSGVTHLIELSLDVKVPSNWV 677
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPEV+ ALD+L++A E+L + +AW +FL EF++ Y +F+AAVQALA
Sbjct: 678 KVNSTKKTIRYHPPEVLTALDKLSLANEELNVACQSAWNSFLVEFSNYYAEFQAAVQALA 737
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLAILS N+ YV+P L D +P ++HI AGRHPVLE+ L D FVPNDT L
Sbjct: 738 ALDCLHSLAILSRNENYVRPILLYDDEPVQIHISAGRHPVLESILQDNFVPNDTDLHADR 797
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA S +LHV D ++TRMGASDSIQ G
Sbjct: 798 EYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQG 857
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL SLV+IDELGRGTSTHDG AIAYATL +L++K+C+ LFV
Sbjct: 858 RSTFLEELSETSNILKSCKERSLVIIDELGRGTSTHDGVAIAYATLHHLLEQKRCMVLFV 917
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+IAEI EFP V Y+VS+L N+ SE ++T+L
Sbjct: 918 THYPKIAEIIAEFPGSVGAYHVSHLT-------------SHRNEETGTMNSESDHDVTYL 964
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKSAAVPLSILPKD 623
YKLVPG++++SFG VA LAQLP SCI +A M+++ E + +R K + L
Sbjct: 965 YKLVPGVSEKSFGFKVAELAQLPSSCINRAVTMASRLEMVVSNRSANKCGKMHL------ 1018
Query: 622 VITKSICQKEELELTKPSLELEIQLAHDGPRLSEILRLLESAMTESRPAEGMLALQAAHE 443
+ T S+CQK+E K +LE+E DG E +L++A++ A+ + L A
Sbjct: 1019 LETSSLCQKDE----KMTLEMESSKCLDG--YKEFFLILKNALSVDDHAKSLQLLNQARG 1072
Query: 442 LAVQQLS 422
LA + +S
Sbjct: 1073 LANELIS 1079
>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
Length = 1096
Score = 489 bits (1259), Expect = e-135
Identities = 244/404 (60%), Positives = 304/404 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEVA+ R +VQMA++KLDSL+ ++KQL + ++++SVSGTTH+IE+P +KVP NW
Sbjct: 621 QFPEVAEARMEVQMAKKKLDSLISLYRKQLGMRKLEFISVSGTTHLIELPLDVKVPSNWV 680
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
K++STKKT RYHPP+V+ ALD LA+A EKL + AW NFL+ F Y +F+AAVQA+A
Sbjct: 681 KINSTKKTVRYHPPDVLTALDHLALANEKLTVTCRAAWDNFLSGFGKYYAEFQAAVQAVA 740
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLA+LS N+ YV+P + D +P ++HI +GRHPVLE TL D FVPNDT LQ
Sbjct: 741 SLDCLHSLAVLSRNKNYVRPVIVYDDEPVQIHISSGRHPVLETTLQDNFVPNDTDLQADR 800
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA S +LHV D +FTRMGASDSI G
Sbjct: 801 EYCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASSAKLHVLDGIFTRMGASDSIHQG 860
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL+ T+ SLV+IDELGRGTSTHDG AIAYATL +L++KKC+ LFV
Sbjct: 861 RSTFLEELSEASHILHNCTARSLVIIDELGRGTSTHDGVAIAYATLHNLLQQKKCMVLFV 920
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+IA I+ EFP V Y+VSYL + D D V + ++++T+L
Sbjct: 921 THYPKIAYIRTEFPGSVEAYHVSYLT--------------SNRDMDTVGMQSENEDVTYL 966
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSR 671
YKLVPG+++RSFG VA LAQLP SCI QA IM+ + E ++SR
Sbjct: 967 YKLVPGVSERSFGFKVAELAQLPSSCIRQATIMAARLEAVVNSR 1010
>ref|XP_006827711.1| hypothetical protein AMTR_s00009p00259730 [Amborella trichopoda]
gi|548832331|gb|ERM95127.1| hypothetical protein
AMTR_s00009p00259730 [Amborella trichopoda]
Length = 1092
Score = 486 bits (1252), Expect = e-134
Identities = 250/404 (61%), Positives = 308/404 (76%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+F EVA+ VQ AE+KLD+L+ ++K L + N+++LSVSG+TH+IE+ S ++VPQNW
Sbjct: 635 KFQEVARGCTAVQAAEEKLDALIGQYRKILGIRNLEFLSVSGSTHLIELASEVRVPQNWV 694
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPEV+ ALD LA+AKE+L I W +FLA F S + DF+A+VQALA
Sbjct: 695 KVNSTKKTIRYHPPEVLTALDGLALAKEELTIICKTTWESFLAGFGSYHADFQASVQALA 754
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCL SLAILS NQ YV+P FLE+++P ++ I++GRHPVLE+ L + FVPNDT L
Sbjct: 755 ALDCLLSLAILSRNQNYVRPVFLEENEPAQIQIQSGRHPVLESILQESFVPNDTNLHVER 814
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQI+TGPNMGGKSCYIRQVALI IMAQVGSFVPA S LHV D ++TRMGASDSIQHG
Sbjct: 815 EYCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSARLHVLDAIYTRMGASDSIQHG 874
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
SSTFFEELSE S+IL+ +S SLV+IDELGRGTSTHDG AIAYATL ++LKEKKC+ LFV
Sbjct: 875 SSTFFEELSETSSILHSCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKEKKCLVLFV 934
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+I +IK +FP V PY+VSYL K E EN N+TFL
Sbjct: 935 THYPKIIDIKYKFPGSVGPYHVSYLT--------TKTTENGENTG--------HGNVTFL 978
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSR 671
YK+VPG D+SFGL+VA LAQLP SCI +AA+M+ K E+++ SR
Sbjct: 979 YKVVPGGTDKSFGLNVAGLAQLPASCIARAAVMAAKLESDVCSR 1022
>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 483 bits (1244), Expect = e-134
Identities = 260/494 (52%), Positives = 336/494 (68%), Gaps = 4/494 (0%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEVAK R +VQ+A +KL+SL+ ++KQL + ++++SVSGTTH+IE+ +KVP NW
Sbjct: 630 QFPEVAKARKEVQLANEKLNSLIGLYRKQLGMRKLEFMSVSGTTHLIELAVDVKVPSNWV 689
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
K++STKKT RYHPP+V+ ALD LA+AKE+L I AW +FL+ F+ Y +F+AA+QALA
Sbjct: 690 KINSTKKTVRYHPPDVLTALDHLALAKEELTIACRAAWDSFLSGFSKYYAEFQAAIQALA 749
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLA+LS N+ YV+P F+ D +P ++HI +GRHPVLE TL D FVPNDT L
Sbjct: 750 SLDCLHSLAVLSRNKNYVRPVFVYDDEPVQIHICSGRHPVLETTLQDNFVPNDTDLHADR 809
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA LHV D ++TRMGASDSIQ G
Sbjct: 810 EYCQIITGPNMGGKSCYIRQVALIAIMAQVGSFVPASLARLHVLDGIYTRMGASDSIQQG 869
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL+ TS SLV+IDELGRGTSTHDG AIAYATL +L++K+C+ LFV
Sbjct: 870 RSTFLEELSEASHILHNCTSRSLVIIDELGRGTSTHDGVAIAYATLHHLLQQKRCMVLFV 929
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQN--IT 809
THYP+IA I+ EFP V Y+VSYL +D DR TV S+N +T
Sbjct: 930 THYPKIASIRTEFPGSVGAYHVSYLT----------------SDRDRGTVDMTSENEDVT 973
Query: 808 FLYKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKSAAVPLSILP 629
+LYKLVPG+++RSFG VA LAQLP SCI +A M+ + E + R+ + L P
Sbjct: 974 YLYKLVPGVSERSFGFKVAELAQLPSSCIRRATFMADRLEAVVRRRESDRYGNKSLLRSP 1033
Query: 628 KDVITKSICQKEELELTKPSLELEIQLAHD--GPRLSEILRLLESAMTESRPAEGMLALQ 455
+ K ++E L T + E Q+ D G ++ L++A++ E + L
Sbjct: 1034 -TMDQKEEVEEEMLGTTGNAYAGENQIKEDIYGSEYNKFFLNLKTAISSDDLTENIRYLN 1092
Query: 454 AAHELAVQQLSFTK 413
A +A + +S K
Sbjct: 1093 HARSIAQELVSRLK 1106
>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
Length = 1115
Score = 480 bits (1235), Expect = e-132
Identities = 259/490 (52%), Positives = 332/490 (67%), Gaps = 3/490 (0%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEVA+ R VQ+A++KLD+L+ ++K+L N++++ VSGTTH+IE+P VP NW
Sbjct: 644 QFPEVARARKAVQLAKEKLDNLIFLYRKRLGKGNLEFMCVSGTTHLIELPIDANVPSNWV 703
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPEV+ ALD+L +A E+L I AW +FL EF Y++F+AAVQALA
Sbjct: 704 KVNSTKKTIRYHPPEVLTALDQLTLANEELTIICRAAWDSFLREFGEYYSEFQAAVQALA 763
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLA LS N+ YV+P F++D++P ++ I +GRHPVLE L +GFVPNDT L
Sbjct: 764 ALDCLHSLATLSRNKNYVRPIFVDDNEPVQIQIHSGRHPVLETILQEGFVPNDTTLHADR 823
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
ECCQI+TGPNMGGKSCYIRQVALI +MAQVGSFVPA S LHV D ++TRMGASDSIQ G
Sbjct: 824 ECCQIVTGPNMGGKSCYIRQVALIAMMAQVGSFVPAASATLHVLDAIYTRMGASDSIQQG 883
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL+ T+ SLVVIDELGRGTSTHDG +IAYATL +L+++KC+ LFV
Sbjct: 884 RSTFLEELSEASQILHNCTARSLVVIDELGRGTSTHDGVSIAYATLHHLLEQRKCMVLFV 943
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQN-ITF 806
THYP IA+IK EFP V Y+VSYL ND VT+ S + +T+
Sbjct: 944 THYPRIADIKVEFPGSVEVYHVSYLTA----------------HNDEVTMDAKSDHEVTY 987
Query: 805 LYKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKS--AAVPLSIL 632
LYKLVPG++ RSFG VA+LAQLP SCI QA IM+T+ E SR KS S
Sbjct: 988 LYKLVPGVSARSFGFKVAQLAQLPSSCISQAIIMATRLEAIESSRVRKKSEERQPETSSS 1047
Query: 631 PKDVITKSICQKEELELTKPSLELEIQLAHDGPRLSEILRLLESAMTESRPAEGMLALQA 452
+++ T+ K + LE L S++L L+SA T+ + L+
Sbjct: 1048 DQELETQENILKSIGSFSSERLE---NLEEFASAFSDLLLNLKSARTDDDLGKSFQLLKE 1104
Query: 451 AHELAVQQLS 422
A +A + ++
Sbjct: 1105 ARSIAKELIN 1114
>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
MSH3, putative [Ricinus communis]
Length = 1100
Score = 476 bits (1226), Expect = e-131
Identities = 236/404 (58%), Positives = 303/404 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEVA V +A++KLDSL+ ++KQL + +++++SVSGTTH+IE+P+ +KVP NW
Sbjct: 628 QFPEVASSNKAVHLAKEKLDSLINLYRKQLKMRSLEFMSVSGTTHLIELPADVKVPLNWV 687
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
K++STKK RYHPPEV+ ALD+LA+A E+L++ AW +FL FA Y +F+A +QALA
Sbjct: 688 KINSTKKMIRYHPPEVLTALDQLALANEELMVVCRAAWDSFLRSFAKHYAEFQAVIQALA 747
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLAILS N+ YV+P F++D++P ++HI +GRHPVLE L D FVPNDT L G
Sbjct: 748 ALDCLHSLAILSKNKNYVRPVFVDDNEPVQIHISSGRHPVLETILLDNFVPNDTCLHVDG 807
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQ++TGPNMGGKSCYIRQVALIV+MAQVGSFVPA S +LHV D ++TRMGASDSIQ G
Sbjct: 808 EHCQVVTGPNMGGKSCYIRQVALIVMMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQG 867
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL K T SLV+IDELGRGTSTHDG AIAYATL +L++K+C+ LFV
Sbjct: 868 RSTFLEELSETSHILRKCTGYSLVIIDELGRGTSTHDGEAIAYATLCHLLEQKRCMVLFV 927
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+IA I+ F V Y+VSYL AE +ND ++++T+L
Sbjct: 928 THYPKIANIRTGFLNSVGAYHVSYLM--------------AEKNNDATDSKFDNEDVTYL 973
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSR 671
YKLVPG+++RSFG VA+LAQLP SCIE+A +M+ + E I R
Sbjct: 974 YKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARLEEAISCR 1017
>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
mismatch repair protein MSH3; Short=AtMSH3; AltName:
Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 474 bits (1221), Expect = e-131
Identities = 241/405 (59%), Positives = 300/405 (74%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPE+A+ R V + +KLDS + +F+K+L + N+++L VSG TH+IE+P KVP NW
Sbjct: 630 QFPELAEARQAVLVIREKLDSSIASFRKKLAIRNLEFLQVSGITHLIELPVDSKVPMNWV 689
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPE++A LDELA+A E L I + +W +FL F+ YTDF+AAVQALA
Sbjct: 690 KVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLKSFSRYYTDFKAAVQALA 749
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSL+ LS N+ YV+P F++D +P +++I++GRHPVLE L D FVPNDT+L G
Sbjct: 750 ALDCLHSLSTLSRNKNYVRPEFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTILHAEG 809
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA +LHV D VFTRMGASDSIQHG
Sbjct: 810 EYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHG 869
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S I+ +S SLV++DELGRGTSTHDG AIAYATLQ +L EK+C+ LFV
Sbjct: 870 RSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFV 929
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYPEIAEI N FP V Y+VSYL L K++ ++D ++T+L
Sbjct: 930 THYPEIAEISNGFPGSVGTYHVSYLT-------LQKDKGSYDHD-----------DVTYL 971
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQ 668
YKLV GL RSFG VA+LAQ+P SCI +A M+ K E E+ +R+
Sbjct: 972 YKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARE 1016
>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
lycopersicum]
Length = 1117
Score = 473 bits (1217), Expect = e-130
Identities = 235/398 (59%), Positives = 299/398 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEVA+ V++A +KLDSL++ +KQLH+ ++Y SV+G TH+IE+P KVP++W
Sbjct: 638 KFPEVAEGTRRVELANEKLDSLIVMHRKQLHIHKLEYTSVAGITHLIELPLNTKVPRDWV 697
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKK RYH PEV+ ALDELA+A E+L + AW+NFL F + +F+A VQALA
Sbjct: 698 KVNSTKKAIRYHSPEVLVALDELALANEQLTVVCQAAWSNFLTGFGGYFAEFQAVVQALA 757
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCL+SLAILS N+ YV+P F+ED + ++HI +GRHPVLEA L D FVPNDT L
Sbjct: 758 SLDCLNSLAILSRNKNYVRPLFVEDDEAVQIHICSGRHPVLEAVLQDNFVPNDTDLHAER 817
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQI+TGPNMGGKSCYIRQVALI +MAQVGSFVPA S +LHV D ++TRMGASDSIQ G
Sbjct: 818 EYCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPAISAKLHVLDGIYTRMGASDSIQQG 877
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL K ++ SLV++DELGRGTSTHDG AIAYATLQ++L+ KKC+ LFV
Sbjct: 878 RSTFLEELSEASDILRKCSANSLVILDELGRGTSTHDGVAIAYATLQYLLEHKKCMVLFV 937
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYPEI IKN+FP V PY+VSYL + K+ E+ ++ N ++IT+L
Sbjct: 938 THYPEIVSIKNKFPGSVGPYHVSYLTSQRDVNGDFKSNEKMDHIN--------GEDITYL 989
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFE 689
YKL PG++ RSFG VA+LAQLP +CI+QA +++ K E
Sbjct: 990 YKLAPGVSGRSFGFKVAQLAQLPVTCIQQAIVIAAKLE 1027
>ref|XP_002993280.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
gi|300138950|gb|EFJ05701.1| hypothetical protein
SELMODRAFT_136810 [Selaginella moellendorffii]
Length = 942
Score = 473 bits (1217), Expect = e-130
Identities = 238/409 (58%), Positives = 308/409 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEV +C+ +++ E+ L+S L +++K L SN++YLSVSGT+ ++EVP +VP +W
Sbjct: 510 QFPEVDECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLVEVPCAQRVPADWV 569
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
K++STKK NRYHPPEV+ A + +A+AKE+L I + AW FL +F S + +FRAAVQALA
Sbjct: 570 KINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALA 629
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCL+SLA++S NQGYV+P F++++ L I+ GRHPVL++TL D FVPNDT+L G G
Sbjct: 630 ALDCLYSLAVVSCNQGYVRPEFVDEAC--LLKIEGGRHPVLDSTLQDAFVPNDTVLSGEG 687
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E QIITGPNMGGKSCYIRQVALI IM+Q+GS+VPA + +LHVFD VFTRMGA D IQ G
Sbjct: 688 ERSQIITGPNMGGKSCYIRQVALITIMSQIGSYVPAATAKLHVFDAVFTRMGAMDRIQRG 747
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
SSTFFEELSE S IL+KATS SLVVIDELGRGTSTHDG AIAYATL +L+E +C TLFV
Sbjct: 748 SSTFFEELSEASTILHKATSRSLVVIDELGRGTSTHDGVAIAYATLHHLLQEVQCFTLFV 807
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THY + E+ FP +V Y++SYLA E E D D+ +V E +Q +TFL
Sbjct: 808 THYLNVTEVVKLFPGRVQAYHMSYLA------------ESPEGDLDKSSVQEAAQKVTFL 855
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKS 656
YKL PG A RSFG++VARLA++P+SC+ +AA + FE+E+ SR + S
Sbjct: 856 YKLQPGAASRSFGINVARLAKVPESCVARAAEKAAAFEDEMSSRHSSNS 904
>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 846
Score = 472 bits (1214), Expect = e-130
Identities = 234/398 (58%), Positives = 300/398 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FP+VA+ R V++A +KLDSL++ ++KQLH+ N++Y SV+G TH+IE+P KVP +W
Sbjct: 365 KFPQVAEGRRRVELANEKLDSLIVVYRKQLHIRNLEYTSVAGITHLIELPLDTKVPPDWV 424
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KVSSTKK RYHP EV+ ALDELA+A E+L + +AW NFLA F + +F+AAVQALA
Sbjct: 425 KVSSTKKAIRYHPSEVVVALDELALANEQLTVICRSAWNNFLAGFGGYFAEFQAAVQALA 484
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCL+SLAILS N+ YV+P F++D + ++HI +GRHPVLE L D FV NDT L
Sbjct: 485 SLDCLNSLAILSRNKNYVRPLFVKDDEAVQIHICSGRHPVLETVLQDNFVSNDTDLHAER 544
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQI+TGPNMGGKSCYIRQVALI +MAQVGSFVPA S +LHV D ++TRMGASDSIQ G
Sbjct: 545 EYCQIVTGPNMGGKSCYIRQVALIALMAQVGSFVPAFSAKLHVLDGIYTRMGASDSIQQG 604
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL K ++ SLV++DELGRGTSTHDG AIA+ATLQ++L+ KKC+ LFV
Sbjct: 605 RSTFLEELSEASDILKKCSASSLVILDELGRGTSTHDGVAIAFATLQYLLEHKKCMVLFV 664
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYPEI +KNEFP V PY+VSYL ++ E+ N S++IT+L
Sbjct: 665 THYPEIVSVKNEFPGSVGPYHVSYLTSQGDVTGDCRSNEKMNYIN--------SEDITYL 716
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFE 689
YKL PG+A+RSFG VA+LAQLP +CI++A +++ + E
Sbjct: 717 YKLAPGVAERSFGFKVAQLAQLPVACIQRAIVIAGRLE 754
>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
arietinum]
Length = 1076
Score = 471 bits (1213), Expect = e-130
Identities = 250/493 (50%), Positives = 333/493 (67%), Gaps = 6/493 (1%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEV + D QMA ++LDSL+ ++K+L + N++Y+ VSG TH+IE+ + +KVP NW
Sbjct: 617 QFPEVITAQKDFQMAVEQLDSLIDLYRKRLGMQNLEYMCVSGVTHLIELSTDVKVPPNWV 676
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPEV+ ALD L++AK+KL + AW +FL +F+ Y +F+A+VQALA
Sbjct: 677 KVNSTKKTIRYHPPEVVTALDGLSLAKDKLTVACRAAWDSFLRDFSKHYAEFQASVQALA 736
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLAILS N+GYV+P F++D +P ++ I +GRHPVLE TL + FVPNDT + G
Sbjct: 737 ALDCLHSLAILSRNKGYVRPVFVDDYEPIQIQICSGRHPVLETTLQNNFVPNDTSMHGDR 796
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQI+TGPNMGGKSCY+RQVALI +MAQVGSFVPA S +LHV D ++TRMGASDSIQ G
Sbjct: 797 EYCQIVTGPNMGGKSCYVRQVALIALMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQG 856
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S IL++ T SLV++DELGRGTSTHDG AIAYATL ++LK+KK + LFV
Sbjct: 857 RSTFLEELSETSHILHRCTGRSLVILDELGRGTSTHDGMAIAYATLHYLLKQKKSLVLFV 916
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+IA ++ EFP V Y+VS+L A K N E+ +T+L
Sbjct: 917 THYPKIACLETEFPGSVAAYHVSHLTSHDDASKNSNNHED----------------VTYL 960
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKSAAVPLSILPKD 623
YKLVPG+++RSFG VA+LAQLP CI +A +M++K E +++R +S
Sbjct: 961 YKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNNRIHGRSG---------- 1010
Query: 622 VITKSICQKEELELTKPSLELEIQLAHDGPR------LSEILRLLESAMTESRPAEGMLA 461
+EL L P ++ E Q HD PR E L++A+ + A+
Sbjct: 1011 ---------KELLLDAPVID-EDQEPHDCPRQEFGRAYKEFYSNLKAAILDDDHAKSFQL 1060
Query: 460 LQAAHELAVQQLS 422
L+ A +A +S
Sbjct: 1061 LENARSIAKSLIS 1073
>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
Length = 1078
Score = 471 bits (1213), Expect = e-130
Identities = 242/405 (59%), Positives = 300/405 (74%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPE+A+ R V + ++KLDSL+ +F+K+L + N+++L VSG TH+IE+P KVP NW
Sbjct: 628 QFPELAEARQAVLVIKEKLDSLISSFRKKLAIRNLEFLQVSGITHLIELPVDAKVPMNWV 687
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPE++A LDELA+A E L I + +W +FL F+ YTDF+AAVQALA
Sbjct: 688 KVNSTKKTIRYHPPEIVAGLDELALATEHLAIVNRASWDSFLESFSRYYTDFQAAVQALA 747
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLA LS N+ YV P F++D +P +++I++GRHPVLE L D FVPNDT L G
Sbjct: 748 ALDCLHSLATLSKNKKYVCPVFVDDCEPVEINIQSGRHPVLETLLQDNFVPNDTSLHAEG 807
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA S++LHV D VFTRMGASDSIQHG
Sbjct: 808 EYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASSVKLHVLDGVFTRMGASDSIQHG 867
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S I+ +S SLV++DELGRGTSTHDG AIAYATLQ +L EK+C+ LFV
Sbjct: 868 RSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLLEKRCLVLFV 927
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYPEIAEI N F V Y+VSYL ++++ D+D ++T+L
Sbjct: 928 THYPEIAEISNGFRGSVGTYHVSYLT---------SQKKKSGFDHD---------DVTYL 969
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQ 668
YKLV GL RSFG VA+LAQ+P SCI +A M K E E+ +R+
Sbjct: 970 YKLVRGLCSRSFGFKVAQLAQIPSSCIRRAISMGAKLEAEVGARE 1014
>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
gi|482551725|gb|EOA15918.1| hypothetical protein
CARUB_v10004012mg [Capsella rubella]
Length = 1182
Score = 471 bits (1212), Expect = e-130
Identities = 240/405 (59%), Positives = 300/405 (74%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPE+A+ R V + ++KLDSL+ +F+K+L + ++++L VSG TH+IE+P KVP NW
Sbjct: 718 QFPELAEARQAVLIVKEKLDSLIASFRKKLAIRSLEFLQVSGITHLIELPVDAKVPMNWV 777
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
+V+STKKT RYHPPEV+A LDELA+A E L I + +W +FL F+ YTDF+AAVQALA
Sbjct: 778 RVNSTKKTIRYHPPEVVAGLDELALATEHLAIVNQASWDSFLKSFSRYYTDFQAAVQALA 837
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLA LS N+ YV P F++D +P +++I++GRHPVLE L D FVPNDT L G
Sbjct: 838 ALDCLHSLATLSRNKKYVCPVFVDDCEPVEINIQSGRHPVLETILQDNFVPNDTNLHAEG 897
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA +LHV D VFTRMGASDSIQHG
Sbjct: 898 EYCQIITGPNMGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHG 957
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S I+ +S SLV++DELGRGTSTHDG AIAYATLQ +L EK+C+ LFV
Sbjct: 958 RSTFLEELSEASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLTEKRCLVLFV 1017
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYPEIAEI N FP V Y+VSY+ ++++ D+D ++T+L
Sbjct: 1018 THYPEIAEISNGFPGAVGTYHVSYMT---------SQKDKSGFDHD---------DVTYL 1059
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQ 668
YKLV GL RSFG VA+LAQ+P SCI +A M+ K E E+ +R+
Sbjct: 1060 YKLVRGLCSRSFGFKVAQLAQIPSSCIRRAITMAAKLEAEVRARE 1104
>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Glycine
max]
Length = 1070
Score = 471 bits (1211), Expect = e-130
Identities = 233/404 (57%), Positives = 305/404 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEV + R ++A ++LDS++ ++KQL + N++++S+SGTTH+IE+ + +KVP NW
Sbjct: 604 QFPEVIRAREAFKLAVEQLDSMIDFYRKQLGMKNLEFISISGTTHLIELSTDVKVPSNWV 663
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYHPPEV+ LD+L++AKE+L + AW NFL +F+ Y +F+AAVQALA
Sbjct: 664 KVNSTKKTIRYHPPEVLTTLDKLSLAKEELTVACRAAWNNFLTDFSKHYAEFQAAVQALA 723
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLHSLAILS N+GYV P F++D +P ++ I +GRHPVLE TL D FVPNDT + G
Sbjct: 724 ALDCLHSLAILSRNKGYVCPVFVDDHEPVQIQISSGRHPVLETTLQDNFVPNDTNMHADG 783
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQI+TGPNMGGKSCYIRQVALIVIMAQVGSFVPA S +LHV D ++TRMGASDSIQ G
Sbjct: 784 EYCQIVTGPNMGGKSCYIRQVALIVIMAQVGSFVPASSAKLHVLDRIYTRMGASDSIQLG 843
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EELSE S ILN T SLV+IDELGRGTSTHDG AIA+ATL ++LK+K+ + LFV
Sbjct: 844 RSTFLEELSETSHILNSCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQKRSMVLFV 903
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+IA + EFP V Y+VS+L + + ++N N + ++T+L
Sbjct: 904 THYPKIASLATEFPGSVAAYHVSHLI----------SHDASKNSN-------LDHDVTYL 946
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSR 671
YKLVPG+++RSFG VA+LAQLP CI +A +M++K E ++SR
Sbjct: 947 YKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSR 990
>ref|XP_002969897.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
gi|300162408|gb|EFJ29021.1| hypothetical protein
SELMODRAFT_30474 [Selaginella moellendorffii]
Length = 876
Score = 471 bits (1211), Expect = e-130
Identities = 237/404 (58%), Positives = 306/404 (75%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+FPEV +C+ +++ E+ L+S L +++K L SN++YLSVSGT+ ++EVP +VP +W
Sbjct: 487 QFPEVDECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLVEVPCVQRVPADWV 546
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
K++STKK NRYHPPEV+ A + +A+AKE+L I + AW FL +F S + +FRAAVQALA
Sbjct: 547 KINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHMEFRAAVQALA 606
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCL+SLA++S NQGYV+P F++++ L I+ GRHPVL++TL D FVPNDT+L G G
Sbjct: 607 ALDCLYSLAVVSCNQGYVRPEFVDEAC--LLKIEGGRHPVLDSTLQDAFVPNDTVLSGEG 664
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E QIITGPNMGGKSCYIRQVALI IM+Q+GS+VPA + +LHVFD VFTRMGA D IQ G
Sbjct: 665 ERSQIITGPNMGGKSCYIRQVALITIMSQIGSYVPAATAKLHVFDAVFTRMGAMDRIQRG 724
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
SSTFFEELSE S IL+KATS SLVVIDELGRGTSTHDG AIAYATL +L+E +C TLFV
Sbjct: 725 SSTFFEELSEASTILHKATSRSLVVIDELGRGTSTHDGVAIAYATLHHLLQEVQCFTLFV 784
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THY + E+ FP +V Y++SYLA E E D D+ +V E +Q +TFL
Sbjct: 785 THYLNVTEVVKLFPGRVQAYHMSYLA------------ESPEGDLDKSSVQEAAQKVTFL 832
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSR 671
YKL PG A RSFG++VARLA++P+SC+ +AA + FE+E+ SR
Sbjct: 833 YKLQPGAASRSFGINVARLAKVPESCVARAAEKAAAFEDEMSSR 876
>ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3-like
[Setaria italica]
Length = 1104
Score = 467 bits (1201), Expect = e-129
Identities = 231/404 (57%), Positives = 300/404 (74%)
Frame = -1
Query: 1879 FPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWTK 1700
FPEVA+ +V+MA+ KL+ L++ ++KQL +SN+++ +V+GTTH+IE+P +VP NW K
Sbjct: 631 FPEVAEGHVNVEMAQHKLELLIIEYRKQLGMSNLEFKTVAGTTHLIELPVDRRVPSNWVK 690
Query: 1699 VSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALAE 1520
++STKKT RYH PE++ LD L +AKE+L + + W FL +F+ Y F+AAV++LA
Sbjct: 691 INSTKKTIRYHTPEILKNLDNLLLAKEELAVICRSTWHKFLTDFSKYYAQFQAAVESLAS 750
Query: 1519 LDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMGE 1340
LDCL+SLA+L+ YV+P F+++S+P ++HIK GRHPVLE+ LGD FVPNDT L GE
Sbjct: 751 LDCLYSLAVLAKQNNYVRPIFVQESEPSQIHIKDGRHPVLESLLGDNFVPNDTELHADGE 810
Query: 1339 CCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHGS 1160
CQI+TGPNMGGKSCYIRQVALI +MAQVGSFVPA S LHV D ++TRMGASDSIQ G+
Sbjct: 811 YCQIVTGPNMGGKSCYIRQVALITMMAQVGSFVPASSAMLHVVDGIYTRMGASDSIQQGT 870
Query: 1159 STFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFVT 980
STF EE++E S IL+ +S SLV+IDELGRGTSTHDG AIAYATL ++LKEKKCI +FVT
Sbjct: 871 STFHEEMNEASNILHNCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKEKKCIVIFVT 930
Query: 979 HYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFLY 800
HYP+I +I+ EF V Y+VSYLA + K E + D ITFLY
Sbjct: 931 HYPKILDIQREFEGSVGAYHVSYLATRKLVEVTDKPLESSPESKD-------LGEITFLY 983
Query: 799 KLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQ 668
KLV G +DRSFGL+VA LAQLP CIE+A+IM+ K + E+ R+
Sbjct: 984 KLVAGASDRSFGLNVALLAQLPSRCIERASIMAAKLQEELSMRE 1027
>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
Length = 1087
Score = 466 bits (1198), Expect = e-128
Identities = 241/437 (55%), Positives = 315/437 (72%)
Frame = -1
Query: 1882 RFPEVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWT 1703
+F EVA+ R VQ A+++LDSL+ +KQL + N++++SVSG TH+IE+P+ KVP NW
Sbjct: 616 QFSEVARARKAVQSAKEELDSLINMCRKQLGMRNLEFMSVSGITHLIELPANFKVPLNWA 675
Query: 1702 KVSSTKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALA 1523
KV+STKKT RYH PEV+ ALD+LA+A E+L I AW +FL EF Y +F+AAVQALA
Sbjct: 676 KVNSTKKTIRYHSPEVLTALDQLALANEELTIVCRAAWDSFLKEFGGYYAEFQAAVQALA 735
Query: 1522 ELDCLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMG 1343
LDCLH+LA LS N+ +V+P F++D +P ++HI +GRHPVL+ L D FVPNDT L
Sbjct: 736 ALDCLHALATLSRNKNFVRPVFVDDHEPVQIHICSGRHPVLDTILLDNFVPNDTNLHAER 795
Query: 1342 ECCQIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHG 1163
E CQIITGPNMGGKSCYIRQVALI IMAQVGSFVPA S ELHV D ++TRMGASDSIQ G
Sbjct: 796 EYCQIITGPNMGGKSCYIRQVALIGIMAQVGSFVPASSAELHVLDGIYTRMGASDSIQQG 855
Query: 1162 SSTFFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFV 983
STF EEL+E S IL T+ SLV++DELGRGTSTHDG AIAYATL ++L+ KKC+ LFV
Sbjct: 856 RSTFLEELNEASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFV 915
Query: 982 THYPEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFL 803
THYP+IA+IK +F V Y+VSYL ++ K++ + S+ Q++T+L
Sbjct: 916 THYPKIADIKTKFTGSVGTYHVSYL----TSHKVMGPMD-----------SKSDQDVTYL 960
Query: 802 YKLVPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSRQLAKSAAVPLSILPKD 623
YK+VPG+++ SFG VA+LAQLP SCI +A +++ K E E+ SR +SA +D
Sbjct: 961 YKVVPGVSESSFGFKVAQLAQLPPSCISRATVIAAKLEAEVSSRVQNRSA-------KRD 1013
Query: 622 VITKSICQKEELELTKP 572
++ K Q++E + P
Sbjct: 1014 LLVKLSDQEQEAQENMP 1030
>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2 [Glycine
max]
Length = 991
Score = 465 bits (1197), Expect = e-128
Identities = 231/401 (57%), Positives = 302/401 (75%)
Frame = -1
Query: 1873 EVAKCRGDVQMAEQKLDSLLLTFKKQLHLSNIQYLSVSGTTHMIEVPSGMKVPQNWTKVS 1694
EV + R ++A ++LDS++ ++KQL + N++++S+SGTTH+IE+ + +KVP NW KV+
Sbjct: 528 EVIRAREAFKLAVEQLDSMIDFYRKQLGMKNLEFISISGTTHLIELSTDVKVPSNWVKVN 587
Query: 1693 STKKTNRYHPPEVIAALDELAVAKEKLVIESSNAWANFLAEFASKYTDFRAAVQALAELD 1514
STKKT RYHPPEV+ LD+L++AKE+L + AW NFL +F+ Y +F+AAVQALA LD
Sbjct: 588 STKKTIRYHPPEVLTTLDKLSLAKEELTVACRAAWNNFLTDFSKHYAEFQAAVQALAALD 647
Query: 1513 CLHSLAILSLNQGYVKPTFLEDSDPPKLHIKAGRHPVLEATLGDGFVPNDTLLQGMGECC 1334
CLHSLAILS N+GYV P F++D +P ++ I +GRHPVLE TL D FVPNDT + GE C
Sbjct: 648 CLHSLAILSRNKGYVCPVFVDDHEPVQIQISSGRHPVLETTLQDNFVPNDTNMHADGEYC 707
Query: 1333 QIITGPNMGGKSCYIRQVALIVIMAQVGSFVPAESLELHVFDLVFTRMGASDSIQHGSST 1154
QI+TGPNMGGKSCYIRQVALIVIMAQVGSFVPA S +LHV D ++TRMGASDSIQ G ST
Sbjct: 708 QIVTGPNMGGKSCYIRQVALIVIMAQVGSFVPASSAKLHVLDRIYTRMGASDSIQLGRST 767
Query: 1153 FFEELSEISAILNKATSCSLVVIDELGRGTSTHDGAAIAYATLQFILKEKKCITLFVTHY 974
F EELSE S ILN T SLV+IDELGRGTSTHDG AIA+ATL ++LK+K+ + LFVTHY
Sbjct: 768 FLEELSETSHILNSCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHY 827
Query: 973 PEIAEIKNEFPEKVNPYYVSYLAEGSSADKLLKNREEAENDNDRVTVSEVSQNITFLYKL 794
P+IA + EFP V Y+VS+L + + ++N N + ++T+LYKL
Sbjct: 828 PKIASLATEFPGSVAAYHVSHLI----------SHDASKNSN-------LDHDVTYLYKL 870
Query: 793 VPGLADRSFGLHVARLAQLPDSCIEQAAIMSTKFENEIHSR 671
VPG+++RSFG VA+LAQLP CI +A +M++K E ++SR
Sbjct: 871 VPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSR 911