BLASTX nr result

ID: Ephedra25_contig00004283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00004283
         (728 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17937.1| unknown [Picea sitchensis]                              90   9e-16

>gb|ABR17937.1| unknown [Picea sitchensis]
          Length = 536

 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 73/220 (33%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
 Frame = -2

Query: 568 FRAVLTAARXXXXXXXHQALEALLHDNTSNSNQRRNG----SPLLPGIGEDEPLXXXXXX 401
           F  VL AA         QAL++    N  N N         S  LPGIGE+EP       
Sbjct: 239 FNNVLAAAAAATSNSSAQALDSTSLINLLNENSSARSPAVRSTRLPGIGEEEPTRSTSEE 298

Query: 400 XXXXXXXXXXXXXGNDSNHAHGHMAIVPTSSP-----HQHDNHNADALALVPTND--DST 242
                         N+ N    +MA+VPTS+       +  N   D  ALVP +   +ST
Sbjct: 299 AGDRNEGDA-----NNGNGRRDNMALVPTSTTAAEGNREQRNAGRDYFALVPIDGAPEST 353

Query: 241 GFGSDREAPNNS------SSECERSIQGDGSNTRTPWKDANT------NIERSPT----- 113
           G  SDR+AP +S            S   +G NT      ++T      N  R PT     
Sbjct: 354 GSTSDRDAPQSSWDAQHNEGAIVESGNANGDNTDNRGFGSSTSSIRSGNENRLPTTKQLA 413

Query: 112 ---RIILEKVKKDRTEAKAIAWQDAEIAKVENRFKRDDSV 2
               + L+KVKKD+ EAKA+AW++A++AKV+NRFKR++++
Sbjct: 414 LQKEVTLQKVKKDKIEAKAVAWEEAKLAKVDNRFKREETI 453


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