BLASTX nr result
ID: Ephedra25_contig00004272
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00004272
(839 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK21762.1| unknown [Picea sitchensis] 77 6e-12
gb|ABK21481.1| unknown [Picea sitchensis] 77 6e-12
gb|EMJ13257.1| hypothetical protein PRUPE_ppa011477mg [Prunus pe... 66 1e-08
ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycin... 66 1e-08
ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precu... 65 2e-08
gb|ESW20052.1| hypothetical protein PHAVU_006G176900g [Phaseolus... 65 3e-08
ref|XP_002317427.2| hypothetical protein POPTR_0011s07530g [Popu... 65 3e-08
gb|EOY28038.1| 50S ribosomal protein L34 [Theobroma cacao] 65 3e-08
emb|CBI30669.3| unnamed protein product [Vitis vinifera] 65 3e-08
ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro... 65 3e-08
ref|XP_004970287.1| PREDICTED: 50S ribosomal protein L34, chloro... 65 4e-08
ref|NP_001235807.1| uncharacterized protein LOC100526907 [Glycin... 65 4e-08
sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, ... 64 5e-08
ref|XP_006644865.1| PREDICTED: 50S ribosomal protein L34, chloro... 64 5e-08
gb|EMT25753.1| Cytochrome P450 94A1 [Aegilops tauschii] 64 7e-08
ref|XP_004293930.1| PREDICTED: 50S ribosomal protein L34, chloro... 64 7e-08
ref|NP_001149346.1| 50S ribosomal protein L34 [Zea mays] gi|1956... 64 7e-08
ref|NP_001044556.2| Os01g0805000 [Oryza sativa Japonica Group] g... 64 9e-08
dbj|BAD68168.1| putative plastid ribosomal protein L34 precursor... 64 9e-08
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro... 63 1e-07
>gb|ABK21762.1| unknown [Picea sitchensis]
Length = 143
Score = 77.4 bits (189), Expect = 6e-12
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Frame = -1
Query: 536 GLSLKTCLNS-----PKRVALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKV 372
G+SL+ LN + ++ VRAGK ALGCT RTHGFR+RM+TPGGR+V
Sbjct: 60 GVSLRPYLNFHWMVVERSTSVMVRAGKAALGCTKRSRSRKSRARTHGFRLRMRTPGGRRV 119
Query: 371 LKRRRTKGRKILVTQTNP 318
+ RRR KGRK LV QTNP
Sbjct: 120 VNRRRAKGRKRLVPQTNP 137
>gb|ABK21481.1| unknown [Picea sitchensis]
Length = 143
Score = 77.4 bits (189), Expect = 6e-12
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Frame = -1
Query: 536 GLSLKTCLNS-----PKRVALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKV 372
G+SL+ LN + ++ VRAGK ALGCT RTHGFR+RM+TPGGR+V
Sbjct: 60 GVSLRPYLNFHWMVVERSTSVMVRAGKAALGCTKRSRSRKSRARTHGFRLRMRTPGGRRV 119
Query: 371 LKRRRTKGRKILVTQTNP 318
+ RRR KGRK LV QTNP
Sbjct: 120 VNRRRAKGRKRLVPQTNP 137
>gb|EMJ13257.1| hypothetical protein PRUPE_ppa011477mg [Prunus persica]
Length = 209
Score = 66.2 bits (160), Expect = 1e-08
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = -1
Query: 536 GLSLKTCLNSPKRVA--LKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKR 363
GL L + + +R + L V+AGK AL T RTHGFR RM+T GGR +LKR
Sbjct: 129 GLDLSSSIGVGRRRSSGLVVKAGKAALCLTKRNRSRKSLARTHGFRRRMRTTGGRAMLKR 188
Query: 362 RRTKGRKILVTQTNP 318
RR KGRKIL T+TNP
Sbjct: 189 RRAKGRKILCTKTNP 203
>ref|NP_001238013.1| uncharacterized protein LOC100500433 [Glycine max]
gi|255630327|gb|ACU15520.1| unknown [Glycine max]
Length = 146
Score = 66.2 bits (160), Expect = 1e-08
Identities = 41/79 (51%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSP------KRVALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL L S K L VRAGK AL T RTHGFR RM TPGGR
Sbjct: 64 GLSLGLDLTSNVGTKRGKGSGLVVRAGKAALCLTKRSRSRKSLARTHGFRKRMSTPGGRA 123
Query: 374 VLKRRRTKGRKILVTQTNP 318
VL+RRR KGR++L T+T+P
Sbjct: 124 VLRRRRAKGRRVLCTKTHP 142
>ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus
communis] gi|223538249|gb|EEF39858.1| 50S ribosomal
protein L34, chloroplast precursor, putative [Ricinus
communis]
Length = 161
Score = 65.5 bits (158), Expect = 2e-08
Identities = 42/79 (53%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSPKRV------ALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL LNS V L VRAGK AL T RTHGFR RM+T GR
Sbjct: 77 GLSLGLDLNSSTGVRKGRGYGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRA 136
Query: 374 VLKRRRTKGRKILVTQTNP 318
VLKRRR KGRK+L T++NP
Sbjct: 137 VLKRRRAKGRKVLCTKSNP 155
>gb|ESW20052.1| hypothetical protein PHAVU_006G176900g [Phaseolus vulgaris]
Length = 147
Score = 65.1 bits (157), Expect = 3e-08
Identities = 41/79 (51%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSP------KRVALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL L S K L VRAGK AL T RTHGFR RM TPGGR
Sbjct: 65 GLSLGLDLTSNVGVRRGKSGGLVVRAGKAALCQTKRNRSRKSLARTHGFRKRMSTPGGRA 124
Query: 374 VLKRRRTKGRKILVTQTNP 318
+L+RRR KGRKIL T+++P
Sbjct: 125 ILRRRRAKGRKILCTKSHP 143
>ref|XP_002317427.2| hypothetical protein POPTR_0011s07530g [Populus trichocarpa]
gi|550327876|gb|EEE98039.2| hypothetical protein
POPTR_0011s07530g [Populus trichocarpa]
Length = 160
Score = 65.1 bits (157), Expect = 3e-08
Identities = 42/79 (53%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSPKRV------ALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL LNS V L VRAGK AL T RTHGFR RM+T GR
Sbjct: 76 GLSLGLDLNSNIGVRKDIGRGLVVRAGKAALCLTKRSRSRKSLARTHGFRRRMRTTSGRA 135
Query: 374 VLKRRRTKGRKILVTQTNP 318
VLKRRR KGRK+L T++NP
Sbjct: 136 VLKRRRAKGRKVLCTKSNP 154
>gb|EOY28038.1| 50S ribosomal protein L34 [Theobroma cacao]
Length = 158
Score = 65.1 bits (157), Expect = 3e-08
Identities = 36/66 (54%), Positives = 42/66 (63%)
Frame = -1
Query: 515 LNSPKRVALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKIL 336
+ + KR L VRAGK AL T RTHGFR RM+T GR VLKRRR KGRK+L
Sbjct: 87 VRNEKRRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGRKVL 146
Query: 335 VTQTNP 318
T++NP
Sbjct: 147 CTKSNP 152
>emb|CBI30669.3| unnamed protein product [Vitis vinifera]
Length = 113
Score = 65.1 bits (157), Expect = 3e-08
Identities = 42/79 (53%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSPKRV------ALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL LNS V L VRAGK AL T RTHGFR RM+T GR
Sbjct: 29 GLSLGLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRA 88
Query: 374 VLKRRRTKGRKILVTQTNP 318
VLKRRR KGRK+L T++NP
Sbjct: 89 VLKRRRAKGRKVLCTKSNP 107
>ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis
vinifera]
Length = 148
Score = 65.1 bits (157), Expect = 3e-08
Identities = 42/79 (53%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSPKRV------ALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL LNS V L VRAGK AL T RTHGFR RM+T GR
Sbjct: 64 GLSLGLDLNSSVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRA 123
Query: 374 VLKRRRTKGRKILVTQTNP 318
VLKRRR KGRK+L T++NP
Sbjct: 124 VLKRRRAKGRKVLCTKSNP 142
>ref|XP_004970287.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Setaria
italica]
Length = 167
Score = 64.7 bits (156), Expect = 4e-08
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = -1
Query: 491 LKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKILVTQTN 321
L++RAGK AL T RTHGFR RM+T GRKVLKRRR KGRK+L T+TN
Sbjct: 102 LQIRAGKAALCMTKRSRSRKSLARTHGFRRRMRTTSGRKVLKRRRAKGRKVLCTKTN 158
>ref|NP_001235807.1| uncharacterized protein LOC100526907 [Glycine max]
gi|255631125|gb|ACU15928.1| unknown [Glycine max]
Length = 146
Score = 64.7 bits (156), Expect = 4e-08
Identities = 41/79 (51%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSP------KRVALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL L S K L VRAGK AL T RTHGFR RM TPGGR
Sbjct: 64 GLSLGLDLTSNFGTRRGKGSGLVVRAGKAALCLTKRSRSRKSLARTHGFRKRMSTPGGRA 123
Query: 374 VLKRRRTKGRKILVTQTNP 318
VL+RRR KGR+ L T+T+P
Sbjct: 124 VLRRRRAKGRRALCTKTHP 142
>sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, chloroplastic; AltName:
Full=CL34; Flags: Precursor gi|189096152|pdb|3BBO|4
Chain 4, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|7578860|gb|AAF64157.1|AF238221_1
plastid ribosomal protein L34 precursor [Spinacia
oleracea]
Length = 152
Score = 64.3 bits (155), Expect = 5e-08
Identities = 41/79 (51%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Frame = -1
Query: 536 GLSLKTCLNSPKRVALK------VRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRK 375
GLSL L S V+ VRAGK AL T RTHGFR+RM T GR
Sbjct: 66 GLSLGLDLTSNTGVSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRA 125
Query: 374 VLKRRRTKGRKILVTQTNP 318
+LKRRR KGRKIL T+TNP
Sbjct: 126 LLKRRRAKGRKILCTKTNP 144
>ref|XP_006644865.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Oryza
brachyantha]
Length = 167
Score = 64.3 bits (155), Expect = 5e-08
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = -1
Query: 491 LKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKILVTQTN 321
L++RAGK AL T RTHGFR RM+T GRKVLKRRR KGRK+L T+TN
Sbjct: 102 LQIRAGKAALCMTKRSRSRKSLARTHGFRRRMRTTAGRKVLKRRRDKGRKVLCTKTN 158
>gb|EMT25753.1| Cytochrome P450 94A1 [Aegilops tauschii]
Length = 754
Score = 63.9 bits (154), Expect = 7e-08
Identities = 39/106 (36%), Positives = 53/106 (50%)
Frame = +1
Query: 175 VEL*KLLRCVIQQIEQAANTKQKICSLKAHADISLKDEMDYQALFPLLGFVCVTRIFLPF 354
+++ + CV+++ + L + ++ + Q P+ F V R FLP
Sbjct: 463 IQMKSIAACVLERFSFQFVGGESRPGLVFSVTLRMEGGLPMQYFVPVGEFDFVHRTFLPL 522
Query: 355 VRLRLSTFLPPGVCIRTRNPCVLALDFRDLDLLVQPRAVLPALTFR 492
RLR TFLP V IR R PC A DF DLDLLV+ RA PAL R
Sbjct: 523 SRLRFRTFLPAVVRIRLRKPCTRASDFLDLDLLVRQRAAFPALICR 568
>ref|XP_004293930.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 150
Score = 63.9 bits (154), Expect = 7e-08
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = -1
Query: 536 GLSLKTCLNSPKR--VALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKR 363
GL L + + +R L VRAGK AL T RTHGFR RM+T GR +LKR
Sbjct: 70 GLDLSSNIGVGRRRGSGLVVRAGKAALCLTKRNKSRKSLARTHGFRRRMRTTSGRAMLKR 129
Query: 362 RRTKGRKILVTQTNP 318
RR KGRK+L T+TNP
Sbjct: 130 RRAKGRKVLCTKTNP 144
>ref|NP_001149346.1| 50S ribosomal protein L34 [Zea mays] gi|195626574|gb|ACG35117.1|
50S ribosomal protein L34 [Zea mays]
gi|414880085|tpg|DAA57216.1| TPA: 50S ribosomal protein
L34 [Zea mays]
Length = 169
Score = 63.9 bits (154), Expect = 7e-08
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1
Query: 491 LKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKILVTQTN 321
+++RAGK AL T RTHGFR RM+T GRKVLKRRR KGRK+L T+TN
Sbjct: 104 MQIRAGKAALCMTKRSRSRKSLARTHGFRRRMRTTSGRKVLKRRRAKGRKVLCTRTN 160
>ref|NP_001044556.2| Os01g0805000 [Oryza sativa Japonica Group]
gi|255673789|dbj|BAF06470.2| Os01g0805000, partial
[Oryza sativa Japonica Group]
Length = 95
Score = 63.5 bits (153), Expect = 9e-08
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1
Query: 491 LKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKILVTQTN 321
L++RAGK AL T RTHGFR RM+T GRKVLKRRR KGR++L T+TN
Sbjct: 30 LQIRAGKAALCMTKRNRSRKSLARTHGFRRRMRTTAGRKVLKRRRAKGRRVLCTKTN 86
>dbj|BAD68168.1| putative plastid ribosomal protein L34 precursor [Oryza sativa
Japonica Group] gi|125528074|gb|EAY76188.1| hypothetical
protein OsI_04121 [Oryza sativa Indica Group]
gi|125572355|gb|EAZ13870.1| hypothetical protein
OsJ_03794 [Oryza sativa Japonica Group]
Length = 167
Score = 63.5 bits (153), Expect = 9e-08
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -1
Query: 491 LKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTKGRKILVTQTN 321
L++RAGK AL T RTHGFR RM+T GRKVLKRRR KGR++L T+TN
Sbjct: 102 LQIRAGKAALCMTKRNRSRKSLARTHGFRRRMRTTAGRKVLKRRRAKGRRVLCTKTN 158
>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
ribosomal protein L34, chloroplastic-like [Cucumis
sativus]
Length = 155
Score = 63.2 bits (152), Expect = 1e-07
Identities = 37/71 (52%), Positives = 42/71 (59%)
Frame = -1
Query: 530 SLKTCLNSPKRVALKVRAGKTALGCTXXXXXXXXXXRTHGFRVRMQTPGGRKVLKRRRTK 351
S K + K L VRAGK AL T RTHGFR RM+T GR VLKRRR K
Sbjct: 79 SSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAK 138
Query: 350 GRKILVTQTNP 318
GRK+L T++NP
Sbjct: 139 GRKVLCTKSNP 149