BLASTX nr result

ID: Ephedra25_contig00004228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00004228
         (1078 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16598.1| unknown [Picea sitchensis]                             210   7e-52
ref|XP_003519500.1| PREDICTED: uncharacterized protein LOC100798...    60   2e-06
ref|XP_002267879.1| PREDICTED: uncharacterized protein LOC100241...    59   4e-06
gb|EOY32945.1| Ubiquitin-associated/translation elongation facto...    57   1e-05

>gb|ABR16598.1| unknown [Picea sitchensis]
          Length = 695

 Score =  210 bits (535), Expect = 7e-52
 Identities = 130/320 (40%), Positives = 173/320 (54%), Gaps = 18/320 (5%)
 Frame = +3

Query: 3    SISYPVSSSLQIGTSASKPLTSETRHRSVGVDTRPVGSAASEPTT-LQPSQTPYTSLQFP 179
            S+SYPV +++Q+G S +K +  E RHR+ G D + V   A EP   +Q  Q+ YT+ Q P
Sbjct: 381  SVSYPVINNVQVGNS-TKTVPVEIRHRTGGSDIKAVQVTAREPVVVMQRPQSSYTT-QLP 438

Query: 180  IXXXXXXXXXXXXXXXXXGWSDNYVDGCTVSNISYSNVPIGNDQFKVNAVGKGTDGNAIK 359
            +                 GW+ NYVD    SN  Y+N   G D  K   VGK   G + K
Sbjct: 439  VASVGVSSASLILPSS--GWNGNYVDSSVPSNFQYNNGSTGTDHLKGVTVGKVPVGISAK 496

Query: 360  GIADIKAPFQPFMSTPLDSVRAGWNSG---------XXXXXXXXXXXXXXXXXXGFYNGW 512
            GIAD +  FQP++S+ +DSV AGW+SG                           G +  W
Sbjct: 497  GIADFQGHFQPYLSSSVDSVTAGWSSGQMGFGSSDTSMPSSTLLSPLNVSNSSSGPFTVW 556

Query: 513  SNPMPGST-DWSKGPMYNGDYTNIDWXXXXXXXXXXXYTR------YPSINNRLLDNVNS 671
               + GS+ DWS G M N DYTNIDW            +       +PS+  +L DNVN 
Sbjct: 557  GPAVTGSSADWSMGSMVNCDYTNIDWSVTPSPSSPQDSSSIGFSRGFPSM-GKLGDNVNC 615

Query: 672  EGGLHNIPATSNMPSENNGSYDLWQPSNGLNSNSGIRLQEQTVNESEHAT-SVALHEWTT 848
            EG L ++   S+   +N+G YD+W  S G ++N+GI LQE+TVNES +AT SV  HEWTT
Sbjct: 616  EGSLQHLSVASSQSEDNSGCYDIWLGSKGRDNNTGIGLQEKTVNESGNATSSVVFHEWTT 675

Query: 849  PFAGKDLFTLPRKLVTSPPL 908
            PFAGKDLF+LPR+LV +PPL
Sbjct: 676  PFAGKDLFSLPRQLVPTPPL 695


>ref|XP_003519500.1| PREDICTED: uncharacterized protein LOC100798094 [Glycine max]
          Length = 650

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
 Frame = +3

Query: 495 GFYNGWSNPMPGST----DWSKGPMYNGDYTNIDWXXXXXXXXXXX------YTRYPSIN 644
           G ++G  +  P       DWS G     DYTNIDW                 ++ +   N
Sbjct: 517 GLFSGLGSAGPSGASSPVDWSTGGTMQFDYTNIDWSLDRSLASPRSNGLWLGFSPFLRSN 576

Query: 645 NRLLDNVNSEGGLHNIPATSNM-PSENNGSYDLWQPSNGLNSNSGIRLQEQTVNESEHAT 821
           +  + + N+ G    + A S+M P  +NGS +   P           LQ+  V  +E +T
Sbjct: 577 SAPMYDANTSG----VVAQSSMRPVPSNGSMNAPMPG----------LQDGGVASAETST 622

Query: 822 SVALHEWTTPFAGKDLFTLPRKLVTSPPL 908
           + +  EW++PF GKDLF+LPR+ V+SP L
Sbjct: 623 AGS-REWSSPFEGKDLFSLPRQFVSSPSL 650


>ref|XP_002267879.1| PREDICTED: uncharacterized protein LOC100241032 [Vitis vinifera]
          Length = 648

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 88/319 (27%), Positives = 120/319 (37%), Gaps = 19/319 (5%)
 Frame = +3

Query: 3    SISYPVSSSLQIGTSASKPLTSETRHRSVGVDTRPVGSAASEPTTLQPS--QTPYTSLQF 176
            S+SY V+SSL        P  +ETR+ +VG          SEP TLQP   + P   +Q 
Sbjct: 370  SVSYSVASSLV----PPPPPKAETRYVAVG----------SEPKTLQPGSLREPVIVMQR 415

Query: 177  P--IXXXXXXXXXXXXXXXXXGWSDNYVDGCTVSNISYSNVPIGNDQFKVNAVGKGTDGN 350
            P  I                 GW  N V+    SN   SN+ I       N +      +
Sbjct: 416  PQSINSEQVLASISSSPGAAAGWYPNNVE-VMKSNGLLSNI-ITARSLSPNNLSANQLYH 473

Query: 351  AIKGIADIKAPFQPFMSTPLDSVRAGWNSGXXXXXXXXXXXXXXXXXXGFYNGWSNPMPG 530
                 A + +   P +          W+                    G     SN + G
Sbjct: 474  HHHHQAQLVSSSSPVVPPGAIQGNDSWSRMSTSPNLSAASSLGLFSWLG-----SNNLAG 528

Query: 531  ST---DWSKGPMYNG-DYTNIDWXXXXXXXXXXXYTRYPSINNRLLDNVNSEGGLHNIPA 698
            S+   DWS G   N  DYTNIDW                S++     + NS G    + A
Sbjct: 529  SSSSVDWSSGGSMNQLDYTNIDW----------------SLDRSSPLSTNSSGLWQGL-A 571

Query: 699  TSNMPSENNGSYDLWQPSNGL-----------NSNSGIRLQEQTVNESEHATSVALHEWT 845
              N P+     YD   P  G+           N  S   LQ+  V  +E A++ +  EWT
Sbjct: 572  FMNNPTP---MYDSSTPGMGVKPTMSTALPNGNMISNALLQDGGVASAE-ASAASSREWT 627

Query: 846  TPFAGKDLFTLPRKLVTSP 902
            +PF GKDLF+LPR+ V+SP
Sbjct: 628  SPFEGKDLFSLPRQFVSSP 646


>gb|EOY32945.1| Ubiquitin-associated/translation elongation factor EF1B protein
           [Theobroma cacao]
          Length = 654

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
 Frame = +3

Query: 504 NGWSNPMPGSTDWSKGP-MYNGDYTNIDWXXXXXXXXXXXYTRYPSINNRLLDNVNSEGG 680
           +G S+P+    DWS G  M   DY NIDW                   +R L +    GG
Sbjct: 533 SGASSPV----DWSSGSSMTQLDYNNIDWSL-----------------DRGLPSSPRPGG 571

Query: 681 LHNIPATSNMPSENNGSYDLWQPSNGLNSNSGIRL-------------QEQTVNESEHAT 821
           +  + ATS M S    ++  +  +NGL++   +RL             Q+  V   E +T
Sbjct: 572 IW-LGATSPMKS----AHMYYPNTNGLSAKPAMRLTPSNGNVVPIAGLQDGGVAPGETST 626

Query: 822 SVALHEWTTPFAGKDLFTLPRKLVTSPPL 908
           + + HEWT+PF GKDLF+LPR+ V+SP L
Sbjct: 627 AGS-HEWTSPFEGKDLFSLPRQFVSSPSL 654


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