BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00004060
         (1004 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi...    58   7e-06
emb|CBI32762.3| unnamed protein product [Vitis vinifera]               58   7e-06
ref|XP_004967235.1| PREDICTED: putative pentatricopeptide repeat...    57   9e-06
ref|XP_003618141.1| Pentatricopeptide repeat-containing protein ...    57   9e-06

>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 38/134 (28%), Positives = 57/134 (42%)
 Frame = -3

Query: 999 MIEGYLCQNSLQEAFLLKDKMKEEDVQLDVNVLRDIINQCLKSERFSDAAKLAQEMVASG 820
           +I G+     ++EA  L ++M+E+ ++ DV V   II+   +S     A  L  EM   G
Sbjct: 301 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 360

Query: 819 FDIDLEILERIVYGYCDTDMXXXXXXXXXXXXEAGMDLKEDVFNPLIDKLCNQGNKKVAL 640
                     +++G C                  G+DL   +FN LID  C  G    AL
Sbjct: 361 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL 420

Query: 639 MLQVIMSKLNKRSN 598
            LQV+M K    S+
Sbjct: 421 RLQVVMEKKGLESD 434


>emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 38/134 (28%), Positives = 57/134 (42%)
 Frame = -3

Query: 999 MIEGYLCQNSLQEAFLLKDKMKEEDVQLDVNVLRDIINQCLKSERFSDAAKLAQEMVASG 820
           +I G+     ++EA  L ++M+E+ ++ DV V   II+   +S     A  L  EM   G
Sbjct: 305 LIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKG 364

Query: 819 FDIDLEILERIVYGYCDTDMXXXXXXXXXXXXEAGMDLKEDVFNPLIDKLCNQGNKKVAL 640
                     +++G C                  G+DL   +FN LID  C  G    AL
Sbjct: 365 LIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEAL 424

Query: 639 MLQVIMSKLNKRSN 598
            LQV+M K    S+
Sbjct: 425 RLQVVMEKKGLESD 438


>ref|XP_004967235.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Setaria italica]
          Length = 701

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 36/129 (27%), Positives = 62/129 (48%)
 Frame = -3

Query: 999 MIEGYLCQNSLQEAFLLKDKMKEEDVQLDVNVLRDIINQCLKSERFSDAAKLAQEMVASG 820
           +I+G+    SL +A  L ++M ++ + LD  V   +I+  LK     DA  L  +M+ SG
Sbjct: 558 LIDGFCKNGSLDKAVQLLNEMVDKSMSLDKVVYTSLIDGYLKQGNLQDAFALKAKMIESG 617

Query: 819 FDIDLEILERIVYGYCDTDMXXXXXXXXXXXXEAGMDLKEDVFNPLIDKLCNQGNKKVAL 640
             +DL      ++G+C+ +M            + G+   + V+N LI K    GN + A 
Sbjct: 618 LQLDLYTYTCFIWGFCNMNMMQEAREVLSEMIQNGITPDKTVYNCLISKYQKLGNMEEAS 677

Query: 639 MLQVIMSKL 613
            LQ  M+ +
Sbjct: 678 SLQNEMNSI 686


>ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355493156|gb|AES74359.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 846

 Score = 57.4 bits (137), Expect = 9e-06
 Identities = 36/144 (25%), Positives = 70/144 (48%)
 Frame = -3

Query: 1002 RMIEGYLCQNSLQEAFLLKDKMKEEDVQLDVNVLRDIINQCLKSERFSDAAKLAQEMVAS 823
            ++ E     N+++EA +LK +M ++ ++L++   + II+   + +R S+A  L +EMV+ 
Sbjct: 480  KLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSL 539

Query: 822  GFDIDLEILERIVYGYCDTDMXXXXXXXXXXXXEAGMDLKEDVFNPLIDKLCNQGNKKVA 643
            G   DLEI   ++ GYC+ +             +       + +N ++   C  GN    
Sbjct: 540  GILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAEL 599

Query: 642  LMLQVIMSKLNKRSNNESQKVSIR 571
            + LQ  + K+    N+ + K  IR
Sbjct: 600  MELQDKLVKIGYVPNSLTCKYVIR 623