BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00003926
         (1348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18358.1| unknown [Picea sitchensis]                             491   e-136
ref|XP_006844672.1| hypothetical protein AMTR_s00016p00242650 [A...   476   e-132
gb|EOY30426.1| RecA DNA recombination family protein [Theobroma ...   456   e-125
ref|XP_004507944.1| PREDICTED: DNA repair protein recA homolog 3...   455   e-125
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3...   451   e-124
ref|XP_006645183.1| PREDICTED: DNA repair protein recA homolog 3...   449   e-123
ref|XP_004507945.1| PREDICTED: DNA repair protein recA homolog 3...   449   e-123
ref|XP_004507943.1| PREDICTED: DNA repair protein recA homolog 3...   449   e-123
ref|XP_002308284.1| recA family protein [Populus trichocarpa] gi...   449   e-123
gb|EMJ05248.1| hypothetical protein PRUPE_ppa026295mg [Prunus pe...   449   e-123
ref|XP_006475474.1| PREDICTED: DNA repair protein recA homolog 3...   447   e-123
ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group] g...   446   e-122
ref|XP_004287571.1| PREDICTED: DNA repair protein recA homolog 3...   446   e-122
ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3...   446   e-122
ref|XP_006345822.1| PREDICTED: DNA repair protein recA homolog 3...   444   e-122
ref|XP_006371978.1| hypothetical protein POPTR_0018s06880g [Popu...   444   e-122
ref|XP_004507946.1| PREDICTED: DNA repair protein recA homolog 3...   442   e-121
ref|XP_006299374.1| hypothetical protein CARUB_v10015533mg [Caps...   442   e-121
ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|A...   441   e-121
ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   441   e-121

>gb|ABR18358.1| unknown [Picea sitchensis]
          Length = 454

 Score =  491 bits (1263), Expect = e-136
 Identities = 253/388 (65%), Positives = 297/388 (76%), Gaps = 1/388 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            K+KS  ++   DD LSEK+ AL+ AL+QI S FGKE +MWLGRF G RNVP ISTGS++L
Sbjct: 78   KTKSDSSEASGDDKLSEKEAALQAALSQIGSTFGKETVMWLGRFLGRRNVPVISTGSLNL 137

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            DVALGIGG PKGR+VEIYGPEASGKTTL LH IAE+QRNGGYC FIDAEHALDP+LAE+I
Sbjct: 138  DVALGIGGFPKGRMVEIYGPEASGKTTLGLHTIAEAQRNGGYCVFIDAEHALDPSLAEAI 197

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV T NLLLAQPDCGEQALS+VDT +R G              PKSELEGEMGDAHMA+Q
Sbjct: 198  GVKTENLLLAQPDCGEQALSLVDTFIRSGSVDVIVVDSVAALVPKSELEGEMGDAHMAVQ 257

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKLTPSL+RSQTL+IF NQ+R KLS+FGG FGGP+EVTAGGNALKFYAS+RL
Sbjct: 258  ARLMSQALRKLTPSLSRSQTLLIFINQVRSKLSSFGG-FGGPSEVTAGGNALKFYASIRL 316

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N+RR G +K+GD+  GSQ+L+KV KNKLAPP KTAE EIEFGRGIS EAE+LDLGCK  +
Sbjct: 317  NIRRTGLLKRGDETFGSQILVKVAKNKLAPPFKTAEFEIEFGRGISCEAEILDLGCKHDM 376

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            ITKSG  Y +N    +GK+ AK YL+EN++++Y L S++KE L            GDI  
Sbjct: 377  ITKSGHHYKLNGETFNGKEKAKSYLRENDQIRYELMSKLKEKLL-----------GDIGQ 425

Query: 1084 TDESASSPNTDTSE-SDEMAETEIASVA 1164
             D      +   SE +DE+ ET   + A
Sbjct: 426  EDVLEKDVSDTFSENNDEIIETAAVAEA 453


>ref|XP_006844672.1| hypothetical protein AMTR_s00016p00242650 [Amborella trichopoda]
            gi|548847143|gb|ERN06347.1| hypothetical protein
            AMTR_s00016p00242650 [Amborella trichopoda]
          Length = 417

 Score =  476 bits (1225), Expect = e-132
 Identities = 245/369 (66%), Positives = 291/369 (78%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS G+D  S+D LS+K+VAL+ AL QI+S+FG EAIMWLGR  G R VP +STGS SL
Sbjct: 24   KSKSDGSD-SSEDKLSDKEVALKAALDQITSSFGNEAIMWLGRCTGPRYVPVVSTGSFSL 82

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGIGGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ G YC F+DAEHALDP LAESI
Sbjct: 83   DLALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKYGAYCVFVDAEHALDPALAESI 142

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV T NLLL+QPDCGEQALS+VDTL+R G              PKSELEGEMGDAHMA+Q
Sbjct: 143  GVKTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELEGEMGDAHMAVQ 202

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+RSQT++IF NQ+R KLSTFGG FGGP EVT+GGNALKFYASVRL
Sbjct: 203  ARLMSQALRKLSHSLSRSQTILIFINQVRAKLSTFGG-FGGPTEVTSGGNALKFYASVRL 261

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG+IKKG+++ GSQVL+KVVKNK APP KTAE E+EFG+GIS +AE+LDLGCK   
Sbjct: 262  NIKRIGFIKKGEEIIGSQVLVKVVKNKHAPPFKTAEFELEFGKGISRDAEILDLGCKHRF 321

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            ITK+GSF+ +N    HGKDA K YL+EN +V   L +++KE L     D  + +    E 
Sbjct: 322  ITKAGSFFRLNGQTFHGKDAIKTYLRENLDVSEDLCTKLKEKLLQHEHDEESEEPTSQEG 381

Query: 1084 TDESASSPN 1110
               + S P+
Sbjct: 382  VSPAESWPH 390


>gb|EOY30426.1| RecA DNA recombination family protein [Theobroma cacao]
          Length = 420

 Score =  456 bits (1172), Expect = e-125
 Identities = 230/382 (60%), Positives = 292/382 (76%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS G+D   D+++S+K++AL++AL QI+S+FGK +IMWLGR    ++VP +STGS +L
Sbjct: 42   KSKSDGSD-SCDENMSKKELALKQALDQITSSFGKGSIMWLGRSVSPKDVPVVSTGSFAL 100

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG GGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD  LAE+I
Sbjct: 101  DIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSALAEAI 160

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 161  GVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQ 220

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT++IF NQ+R KLSTFGG FGGP EVT GGNALKFYASVRL
Sbjct: 221  ARLMSQALRKLSHSLSLSQTILIFVNQVRSKLSTFGG-FGGPTEVTCGGNALKFYASVRL 279

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N+RR G +KKG++  GSQVL+K+VKNKLAPP KTA+ E+EFGRGIS E E++DL  K   
Sbjct: 280  NIRRTGLVKKGEETIGSQVLVKIVKNKLAPPFKTAQFELEFGRGISREGEIIDLALKHKF 339

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            +TKSG+FY+ N+ ++HGK+A K++L ENE     L  +++E L  A  +    ++ DI +
Sbjct: 340  VTKSGAFYSFNDKKIHGKEAFKKFLAENESACEELVMKLREKLLEA--ERKKERQTDISD 397

Query: 1084 TDESASSPNTDTSESDEMAETE 1149
             D S      DT++ +     E
Sbjct: 398  GDTSEEIIPPDTTDEEAATAVE 419


>ref|XP_004507944.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X2 [Cicer arietinum]
          Length = 426

 Score =  455 bits (1171), Expect = e-125
 Identities = 230/371 (61%), Positives = 289/371 (77%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            +SKS G+D   ++++S+KD+AL++AL QI+S FGK +IMWLGR +  ++VP +STGS +L
Sbjct: 51   RSKSDGSD-SGEENMSKKDLALKQALDQITSTFGKGSIMWLGRSDWPKDVPVVSTGSFAL 109

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGIGGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD TLAESI
Sbjct: 110  DIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESI 169

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 170  GVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQ 229

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQ+++IF NQ+R KLSTFGG F GP EVT GGNALKFYASVRL
Sbjct: 230  ARLMSQALRKLSHSLSLSQSILIFINQVRSKLSTFGG-FSGPTEVTCGGNALKFYASVRL 288

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG++KKG++V GSQVL+KVVKNKLAPP KTAE E++FG+GI  EAE++ L  K  L
Sbjct: 289  NIKRIGFVKKGEEVVGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLSLKYKL 348

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            I+K+GS Y  NEH   G DA + +L EN      L  +I+E +    TD +   +GD+  
Sbjct: 349  ISKAGSMYYFNEHNFRGVDALRNFLAENYSALEELEMKIREKILKPETDKVTESDGDV-- 406

Query: 1084 TDESASSPNTD 1116
            T+E A+  +TD
Sbjct: 407  TEEIATLDSTD 417


>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Glycine
            max]
          Length = 459

 Score =  451 bits (1161), Expect = e-124
 Identities = 229/385 (59%), Positives = 298/385 (77%), Gaps = 3/385 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            +SKS G+D   ++++S+K++AL++AL QI+S FGK +IMWLGR    +NVP +STGS +L
Sbjct: 67   RSKSDGSD-SGEENMSKKELALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFAL 125

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            DVALGIGGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD TLAESI
Sbjct: 126  DVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESI 185

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 186  GVNTTNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQ 245

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ +L+ SQT++IF NQ+R K+STFGG F GP EVT GGNALKFYASVRL
Sbjct: 246  ARLMSQALRKLSHALSLSQTILIFINQVRSKISTFGG-FSGPTEVTCGGNALKFYASVRL 304

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG++KKG+++ GSQVL+KVVKNKLAPP KTAE E++FG+GI  E E++DL     L
Sbjct: 305  NIKRIGFVKKGEEILGSQVLVKVVKNKLAPPFKTAEFELQFGKGICKETEIIDLSVNHKL 364

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            I+K+G+ +  NEH   GKDA K +L EN      L  +++E L +A T+ +  +E D+ N
Sbjct: 365  ISKAGAMFYYNEHSFRGKDALKNFLAENRSALEELEMKLREKLLNAETEKM--QESDVIN 422

Query: 1084 ---TDESASSPNTDTSESDEMAETE 1149
               T+E A+  +T+ + ++++A  +
Sbjct: 423  GYVTEEIATVDSTNDNVTEKIATVD 447


>ref|XP_006645183.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Oryza brachyantha]
          Length = 426

 Score =  449 bits (1155), Expect = e-123
 Identities = 234/382 (61%), Positives = 291/382 (76%), Gaps = 3/382 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            K K  G D   +++LS+KD+AL +A+ QI+S FGK AIMWLGR  G R VP +STGS SL
Sbjct: 46   KVKPSGTD-SGEENLSKKDLALHQAIDQITSAFGKGAIMWLGRSEGHREVPVVSTGSFSL 104

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGIGGLPKGRV+E+YGPEASGKTTL+LHVIAE+Q+NGGYCAF+DAEHALDP LAESI
Sbjct: 105  DLALGIGGLPKGRVIEVYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALDPALAESI 164

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+TNNLLL+QPDCGEQALS+VDTL+R G              PKSEL+GEMGDAH+ALQ
Sbjct: 165  GVNTNNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQ 224

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT+++F NQIR K++TFGG FGGP EVT+GGNALKFYASVR+
Sbjct: 225  ARLMSQALRKLSHSLSLSQTILLFINQIRSKVTTFGG-FGGPMEVTSGGNALKFYASVRM 283

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG +KKG++  GSQVL+K+VKNK APP KTA+ E+EFG+GI   +E+++LG K  L
Sbjct: 284  NIKRIGLVKKGEETIGSQVLVKIVKNKHAPPFKTAQFELEFGKGICRSSELIELGLKHKL 343

Query: 904  ITK-SGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDI- 1077
            + K  G+FY+ NE    GKDA K YL ENE V   L + +++ L           EGD  
Sbjct: 344  VKKLGGAFYSFNEESYRGKDALKSYLNENESVAKELEANLRK-LMETEAPKRQEDEGDFL 402

Query: 1078 -ENTDESASSPNTDTSESDEMA 1140
             +  DES +S   +TS  +E+A
Sbjct: 403  SDMPDESLTS---ETSSEEELA 421


>ref|XP_004507945.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X3 [Cicer arietinum]
          Length = 421

 Score =  449 bits (1155), Expect = e-123
 Identities = 230/376 (61%), Positives = 289/376 (76%), Gaps = 5/376 (1%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            +SKS G+D   ++++S+KD+AL++AL QI+S FGK +IMWLGR +  ++VP +STGS +L
Sbjct: 41   RSKSDGSD-SGEENMSKKDLALKQALDQITSTFGKGSIMWLGRSDWPKDVPVVSTGSFAL 99

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGIGGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD TLAESI
Sbjct: 100  DIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESI 159

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCG-----XXXXXXXXXXXXXXPKSELEGEMGDA 528
            GV+T NLLL+QPDCGEQALS+VDTL+R G                   PK EL+GEMGDA
Sbjct: 160  GVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSGSINKVAALVPKGELDGEMGDA 219

Query: 529  HMALQARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFY 708
            HMA+QARLMSQALRKL+ SL+ SQ+++IF NQ+R KLSTFGG F GP EVT GGNALKFY
Sbjct: 220  HMAMQARLMSQALRKLSHSLSLSQSILIFINQVRSKLSTFGG-FSGPTEVTCGGNALKFY 278

Query: 709  ASVRLNVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLG 888
            ASVRLN++RIG++KKG++V GSQVL+KVVKNKLAPP KTAE E++FG+GI  EAE++ L 
Sbjct: 279  ASVRLNIKRIGFVKKGEEVVGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLS 338

Query: 889  CKQGLITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKE 1068
             K  LI+K+GS Y  NEH   G DA + +L EN      L  +I+E +    TD +   +
Sbjct: 339  LKYKLISKAGSMYYFNEHNFRGVDALRNFLAENYSALEELEMKIREKILKPETDKVTESD 398

Query: 1069 GDIENTDESASSPNTD 1116
            GD+  T+E A+  +TD
Sbjct: 399  GDV--TEEIATLDSTD 412


>ref|XP_004507943.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X1 [Cicer arietinum]
          Length = 431

 Score =  449 bits (1155), Expect = e-123
 Identities = 230/376 (61%), Positives = 289/376 (76%), Gaps = 5/376 (1%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            +SKS G+D   ++++S+KD+AL++AL QI+S FGK +IMWLGR +  ++VP +STGS +L
Sbjct: 51   RSKSDGSD-SGEENMSKKDLALKQALDQITSTFGKGSIMWLGRSDWPKDVPVVSTGSFAL 109

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGIGGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD TLAESI
Sbjct: 110  DIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESI 169

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCG-----XXXXXXXXXXXXXXPKSELEGEMGDA 528
            GV+T NLLL+QPDCGEQALS+VDTL+R G                   PK EL+GEMGDA
Sbjct: 170  GVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSGSINKVAALVPKGELDGEMGDA 229

Query: 529  HMALQARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFY 708
            HMA+QARLMSQALRKL+ SL+ SQ+++IF NQ+R KLSTFGG F GP EVT GGNALKFY
Sbjct: 230  HMAMQARLMSQALRKLSHSLSLSQSILIFINQVRSKLSTFGG-FSGPTEVTCGGNALKFY 288

Query: 709  ASVRLNVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLG 888
            ASVRLN++RIG++KKG++V GSQVL+KVVKNKLAPP KTAE E++FG+GI  EAE++ L 
Sbjct: 289  ASVRLNIKRIGFVKKGEEVVGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLS 348

Query: 889  CKQGLITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKE 1068
             K  LI+K+GS Y  NEH   G DA + +L EN      L  +I+E +    TD +   +
Sbjct: 349  LKYKLISKAGSMYYFNEHNFRGVDALRNFLAENYSALEELEMKIREKILKPETDKVTESD 408

Query: 1069 GDIENTDESASSPNTD 1116
            GD+  T+E A+  +TD
Sbjct: 409  GDV--TEEIATLDSTD 422


>ref|XP_002308284.1| recA family protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
            recA family protein [Populus trichocarpa]
          Length = 418

 Score =  449 bits (1155), Expect = e-123
 Identities = 229/383 (59%), Positives = 293/383 (76%), Gaps = 1/383 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS G++   ++++S+K++AL++AL QI+S FGK AIMW GR    +NVP +STGS +L
Sbjct: 42   KSKSDGSE-SGEENMSKKELALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFAL 100

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG GG PKGRVVEI+GPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD +LA++I
Sbjct: 101  DIALGCGGFPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDSSLAKAI 160

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PKSEL+GEMGDAHMA+Q
Sbjct: 161  GVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQ 220

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL++SQT+++F NQ+R KLSTFG  FGGP EVT GGNALKFYASVRL
Sbjct: 221  ARLMSQALRKLSHSLSQSQTILVFINQVRAKLSTFG--FGGPTEVTCGGNALKFYASVRL 278

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N+RR+G+IKKG++ TG+QV +K+VKNKLAPP KT + E+EFG+GIS E+E+++L  K  L
Sbjct: 279  NIRRVGFIKKGEETTGTQVQVKIVKNKLAPPFKTVQFELEFGKGISRESEIIELALKHKL 338

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEG-DIE 1080
            I KSGSFY  N  + HGK+A KE+L  N++V+  L  +++E L    T    G E  D E
Sbjct: 339  IKKSGSFYDCNGKKYHGKEAFKEFLAHNDDVQEELMMKLREKLLEGETGQELGDESTDGE 398

Query: 1081 NTDESASSPNTDTSESDEMAETE 1149
             T E  S  +TD    +E+A  E
Sbjct: 399  PTQEIISPDSTD----EEVAAAE 417


>gb|EMJ05248.1| hypothetical protein PRUPE_ppa026295mg [Prunus persica]
          Length = 415

 Score =  449 bits (1154), Expect = e-123
 Identities = 226/371 (60%), Positives = 285/371 (76%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS G+D  +++++S+KD+AL++AL QI+S+FGK +IMWLGR    R VP +STGS +L
Sbjct: 42   KSKSDGSD-SNEENMSKKDLALQQALDQITSSFGKGSIMWLGRSASPRQVPVVSTGSFAL 100

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG GG PKGRVVEI+GPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALDP+LA++I
Sbjct: 101  DLALGTGGFPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPSLAQAI 160

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 161  GVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQ 220

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT++IFTNQ+R K+STFGG FGGP EV  GGNALKFYASVRL
Sbjct: 221  ARLMSQALRKLSHSLSLSQTILIFTNQVRSKISTFGG-FGGPTEVPCGGNALKFYASVRL 279

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N+RRIG IKKG++  GSQV +K+VKNKLAPP +T  +E+EFG+GI  E+E+++LG K   
Sbjct: 280  NIRRIGLIKKGEETLGSQVQVKIVKNKLAPPFRTVHIELEFGKGICRESEIIELGVKNKF 339

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            +TKSGS Y +N    HGKDA K +L EN      L ++++E L    TDN    E + E 
Sbjct: 340  VTKSGSHYNLNGQNFHGKDALKRFLAENNTAMEELTTKLREKLVDVVTDN----EAETEP 395

Query: 1084 TDESASSPNTD 1116
             +E  S  +TD
Sbjct: 396  MEEIVSPDSTD 406


>ref|XP_006475474.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Citrus sinensis]
          Length = 427

 Score =  447 bits (1149), Expect = e-123
 Identities = 230/386 (59%), Positives = 289/386 (74%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS G+D   ++++S+KD+AL++AL QI+S+FGK +IMWLGR    R+VP +STGS +L
Sbjct: 49   KSKSDGSD-SGEENMSKKDLALQQALDQITSSFGKGSIMWLGRSVTPRHVPVVSTGSFAL 107

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG GGLPKGRVVEIYGPEASGKTTL+LHVIAE+QR GGYC FIDAEHALDP+LAE+I
Sbjct: 108  DIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQRQGGYCVFIDAEHALDPSLAETI 167

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV T NLLLAQPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 168  GVKTENLLLAQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQ 227

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT++IF NQ+R KLSTFG  FGGP EVT GGNALKFYASVRL
Sbjct: 228  ARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFG--FGGPTEVTCGGNALKFYASVRL 285

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG +KKG++  GSQ+ +K+VKNKLAPP KTA+ E+EFG+GIS E+E++DL  K   
Sbjct: 286  NIKRIGLVKKGEETIGSQIAVKIVKNKLAPPFKTAQFELEFGKGISRESEIIDLALKHKF 345

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
             +K+G+ +T N+    GK+A K++L ENE V+  L  +++E L       ++ KE     
Sbjct: 346  TSKAGAMFTYNDRNFRGKEAFKQFLVENESVREELVIKLREKLV------VDHKEPQTAV 399

Query: 1084 TDESASSPNTDTSESDEMAETEIASV 1161
            TDE ++     T   D   E   A V
Sbjct: 400  TDEDSTEETVSTISPDSTDEEAAAVV 425


>ref|NP_001045109.1| Os01g0901200 [Oryza sativa Japonica Group]
            gi|56784510|dbj|BAD82767.1| putative recA protein [Oryza
            sativa Japonica Group] gi|56784869|dbj|BAD82109.1|
            putative recA protein [Oryza sativa Japonica Group]
            gi|113534640|dbj|BAF07023.1| Os01g0901200 [Oryza sativa
            Japonica Group] gi|222619696|gb|EEE55828.1| hypothetical
            protein OsJ_04434 [Oryza sativa Japonica Group]
          Length = 429

 Score =  446 bits (1147), Expect = e-122
 Identities = 230/380 (60%), Positives = 290/380 (76%), Gaps = 1/380 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            K+KS G D   +++LS+KD+AL +A+ QI+S FGK AIMWLGR  G R VP +STGS SL
Sbjct: 49   KTKSSGTD-SGEENLSKKDLALHQAIDQITSAFGKGAIMWLGRSEGRREVPVVSTGSFSL 107

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG GGLPKGRV+E+YGPEASGKTTL+LHVIAE+Q++GGYCAF+DAEHALDP LAESI
Sbjct: 108  DLALGTGGLPKGRVIEVYGPEASGKTTLALHVIAEAQKHGGYCAFVDAEHALDPALAESI 167

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T+NLLL+QPDCGEQALS+VDTL+R G              PKSEL+GEMGDAH+ALQ
Sbjct: 168  GVNTSNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHVALQ 227

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT+++F NQIR K++TFGG FGGP EVT+GGNALKFYASVR+
Sbjct: 228  ARLMSQALRKLSHSLSLSQTILLFINQIRSKVTTFGG-FGGPMEVTSGGNALKFYASVRM 286

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG +KKG++  GSQVL+K+VKNK APP KTA+ E+EFG+GI   +E+++LG K  L
Sbjct: 287  NIKRIGLVKKGEETIGSQVLVKIVKNKHAPPFKTAQFELEFGKGICRSSELIELGLKHKL 346

Query: 904  ITK-SGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIE 1080
            + K  G+FY+ NE    GKDA K YL ENE +   L + +++ L           EGD  
Sbjct: 347  VKKLGGAFYSFNEESYRGKDALKSYLNENESIAKELETNLRK-LMETQAPKKQEDEGDF- 404

Query: 1081 NTDESASSPNTDTSESDEMA 1140
             +D    S  T+TS  +E+A
Sbjct: 405  LSDLPEESLATETSSEEELA 424


>ref|XP_004287571.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  446 bits (1146), Expect = e-122
 Identities = 227/383 (59%), Positives = 286/383 (74%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS G+D    +++S+KD+AL++AL QI+ +FGK +IMWLGR +G RNV  +STGS SL
Sbjct: 42   KSKSDGSD-SGGENMSKKDLALQQALDQITESFGKGSIMWLGRSSGPRNVEVVSTGSFSL 100

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG GG PKGRVVEIYGPEASGKTTL+LH IAE+Q+ GGYC F+DAEHALDPTLA+ I
Sbjct: 101  DLALGTGGFPKGRVVEIYGPEASGKTTLALHAIAEAQKQGGYCVFVDAEHALDPTLAQRI 160

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV T NLLL+QPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 161  GVKTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQ 220

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ S+T++IFTNQ+R KLSTFGG FGGP EVT GGNALKFYASVRL
Sbjct: 221  ARLMSQALRKLSHSLSLSKTILIFTNQVRSKLSTFGG-FGGPQEVTCGGNALKFYASVRL 279

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N+RR+G IKKG+++ GSQV +K+VKNKLAPP +   LE+EFG+G S E+E+++LG K   
Sbjct: 280  NIRRVGSIKKGEEIVGSQVQVKIVKNKLAPPFRNVLLELEFGKGFSRESELIELGLKNKF 339

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            I K GS Y +N    HGKDA K +L E++  +  L  +++E L     D +  K+ + E 
Sbjct: 340  IIKGGSHYNLNGQNFHGKDALKRFLSEDDTAREELTLKLREKL----VDALEDKDPETEP 395

Query: 1084 TDESASSPNTDTSESDEMAETEI 1152
             DES++        +DE A T +
Sbjct: 396  LDESSTEEIVSPDSTDEDAVTAV 418


>ref|XP_004240180.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Solanum lycopersicum]
          Length = 418

 Score =  446 bits (1146), Expect = e-122
 Identities = 227/372 (61%), Positives = 285/372 (76%), Gaps = 1/372 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KS S G+D   +++LS+KD+AL+ AL QI+++FGK +IMWLGR    + VP +STGS SL
Sbjct: 43   KSNSDGSD-SGEENLSKKDLALKHALDQITTSFGKGSIMWLGRTVSPKQVPVVSTGSFSL 101

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGIGGLPKGRV+EIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHAL+PTLAE+I
Sbjct: 102  DIALGIGGLPKGRVIEIYGPEASGKTTLALHVIAEAQKQGGYCCFVDAEHALNPTLAETI 161

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T+NLLL+QPDCGEQALS+VDT++R G              PK ELEGEMGDAHMA+Q
Sbjct: 162  GVNTSNLLLSQPDCGEQALSLVDTIIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQ 221

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT++IF NQ+R KLSTFGG FGGP+EVT GGNALKFYASVRL
Sbjct: 222  ARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGG-FGGPSEVTCGGNALKFYASVRL 280

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG++KKG++  GSQVL+K+VKNK APP +TAE E+EFG+GIS EAE++DLG K   
Sbjct: 281  NIKRIGFVKKGEETIGSQVLVKIVKNKHAPPFRTAEFELEFGKGISREAELIDLGVKHKF 340

Query: 904  ITK-SGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIE 1080
            ITK  G +Y IN     G+DA K +L EN   +  L  +++E L        N K  D++
Sbjct: 341  ITKGGGGYYNINNQNFRGRDAVKLFLSENTSAREDLMMKLREKLIDQGD---NEKGPDVD 397

Query: 1081 NTDESASSPNTD 1116
              +E   +  TD
Sbjct: 398  PVEEVVLNDTTD 409


>ref|XP_006345822.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Solanum tuberosum]
          Length = 418

 Score =  444 bits (1142), Expect = e-122
 Identities = 226/372 (60%), Positives = 284/372 (76%), Gaps = 1/372 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KS S G+D   +++LS+KD+AL+ AL QI+++FGK +IMWLGR    + VP +STGS SL
Sbjct: 43   KSNSDGSD-SGEENLSKKDLALKHALDQITTSFGKGSIMWLGRTASPKQVPVVSTGSFSL 101

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGIGGLPKGRV+EIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHAL+PTLAE+I
Sbjct: 102  DIALGIGGLPKGRVIEIYGPEASGKTTLALHVIAEAQKQGGYCCFVDAEHALNPTLAETI 161

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T+NLLL+QPDCGEQALS+VDT++R G              PK ELEGEMGDAHMA+Q
Sbjct: 162  GVNTSNLLLSQPDCGEQALSLVDTIIRSGSVDVVVVDSVAALVPKGELEGEMGDAHMAMQ 221

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT++IF NQ+R KLSTFGG FGGP+EVT GGNALKFYASVRL
Sbjct: 222  ARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGG-FGGPSEVTCGGNALKFYASVRL 280

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG +KKG++  GSQVL+K+VKNK APP +TAE E+EFG+GIS EAE++DLG K   
Sbjct: 281  NIKRIGLVKKGEETIGSQVLVKIVKNKHAPPFRTAEFELEFGKGISREAELIDLGVKHKF 340

Query: 904  ITK-SGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIE 1080
            ITK  G +Y+IN     G+DA K +L EN   +  L  +++E L          K  D++
Sbjct: 341  ITKGGGGYYSINNQNFRGRDAVKHFLSENTSAREDLMMKLREKLIDQGDKE---KGPDVD 397

Query: 1081 NTDESASSPNTD 1116
              +E   +  TD
Sbjct: 398  PVEEVVLNDTTD 409


>ref|XP_006371978.1| hypothetical protein POPTR_0018s06880g [Populus trichocarpa]
            gi|550318224|gb|ERP49775.1| hypothetical protein
            POPTR_0018s06880g [Populus trichocarpa]
          Length = 417

 Score =  444 bits (1142), Expect = e-122
 Identities = 222/372 (59%), Positives = 287/372 (77%), Gaps = 1/372 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS G++   +++ S+KD+AL++AL QI+S FGK +IMW GR    +NVP +STGS +L
Sbjct: 38   KSKSDGSE-SGEENTSKKDLALQQALDQITSQFGKGSIMWFGRSEAPKNVPVVSTGSFAL 96

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG GG PKGRVVEI+GPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD +LA++I
Sbjct: 97   DIALGCGGFPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCVFMDAEHALDSSLAKAI 156

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PKSEL+GEMGDAHMA+Q
Sbjct: 157  GVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMGDAHMAMQ 216

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL++SQT++IF NQ+R KLSTFG  FGGP EVT GGNALKFYASVRL
Sbjct: 217  ARLMSQALRKLSHSLSQSQTVLIFINQVRAKLSTFG--FGGPTEVTCGGNALKFYASVRL 274

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N+RR+G+IKKG++ TG+QV +K+ KNKLAPP KT + E+EFG+GIS E+E+++L  K   
Sbjct: 275  NIRRVGFIKKGEETTGTQVQVKIAKNKLAPPFKTVQFELEFGKGISRESEIIELAVKHKF 334

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTD-NINGKEGDIE 1080
            I K+G+FY  N  + HGK+A +E+L  N++V+  L  +++E L  A TD  +  +  D E
Sbjct: 335  IKKNGAFYDCNGRKYHGKEALREFLAHNDDVQEELMMKLREKLLEAETDQELKDETTDGE 394

Query: 1081 NTDESASSPNTD 1116
             T ES    +TD
Sbjct: 395  PTQESIPPDSTD 406


>ref|XP_004507946.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X4 [Cicer arietinum]
          Length = 368

 Score =  442 bits (1138), Expect = e-121
 Identities = 225/362 (62%), Positives = 279/362 (77%), Gaps = 5/362 (1%)
 Frame = +1

Query: 46   LSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSLDVALGIGGLPKGRV 225
            +S+KD+AL++AL QI+S FGK +IMWLGR +  ++VP +STGS +LD+ALGIGGLPKGRV
Sbjct: 1    MSKKDLALKQALDQITSTFGKGSIMWLGRSDWPKDVPVVSTGSFALDIALGIGGLPKGRV 60

Query: 226  VEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESIGVDTNNLLLAQPDC 405
            VEIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALD TLAESIGV+T NLLL+QPDC
Sbjct: 61   VEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTLAESIGVNTQNLLLSQPDC 120

Query: 406  GEQALSVVDTLVRCG-----XXXXXXXXXXXXXXPKSELEGEMGDAHMALQARLMSQALR 570
            GEQALS+VDTL+R G                   PK EL+GEMGDAHMA+QARLMSQALR
Sbjct: 121  GEQALSLVDTLIRSGSVDVIVVDSGSINKVAALVPKGELDGEMGDAHMAMQARLMSQALR 180

Query: 571  KLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRLNVRRIGYIK 750
            KL+ SL+ SQ+++IF NQ+R KLSTFGG F GP EVT GGNALKFYASVRLN++RIG++K
Sbjct: 181  KLSHSLSLSQSILIFINQVRSKLSTFGG-FSGPTEVTCGGNALKFYASVRLNIKRIGFVK 239

Query: 751  KGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGLITKSGSFYT 930
            KG++V GSQVL+KVVKNKLAPP KTAE E++FG+GI  EAE++ L  K  LI+K+GS Y 
Sbjct: 240  KGEEVVGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKLSLKYKLISKAGSMYY 299

Query: 931  INEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIENTDESASSPN 1110
             NEH   G DA + +L EN      L  +I+E +    TD +   +GD+  T+E A+  +
Sbjct: 300  FNEHNFRGVDALRNFLAENYSALEELEMKIREKILKPETDKVTESDGDV--TEEIATLDS 357

Query: 1111 TD 1116
            TD
Sbjct: 358  TD 359


>ref|XP_006299374.1| hypothetical protein CARUB_v10015533mg [Capsella rubella]
            gi|482568083|gb|EOA32272.1| hypothetical protein
            CARUB_v10015533mg [Capsella rubella]
          Length = 430

 Score =  442 bits (1136), Expect = e-121
 Identities = 230/392 (58%), Positives = 291/392 (74%), Gaps = 5/392 (1%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            KSKS GN   S++ +S+K++AL+EAL QI+S+FGK +IMWLGR    RNVP  STGS +L
Sbjct: 42   KSKSDGNG-SSEEGMSKKEIALQEALDQITSSFGKGSIMWLGRAVSPRNVPVFSTGSFAL 100

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALG+GGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ GG C F+DAEHALD +LA++I
Sbjct: 101  DLALGVGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAI 160

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PK ELEGEMGDAHMA+Q
Sbjct: 161  GVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQ 220

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQTL+IF NQ+R KLSTFGG FGGP EVT GGNALKFYAS+RL
Sbjct: 221  ARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGG-FGGPTEVTCGGNALKFYASMRL 279

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG IKKG++ TGSQV +K+VKNKLAPP +TA+ E+EFG+GI    E++DL  K   
Sbjct: 280  NIKRIGLIKKGEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKVTEIIDLSIKHKF 339

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            I K+G+FY +N    HGK+A K++L++NE  +  L  ++++ L     D    KE + E 
Sbjct: 340  IAKNGTFYNLNGKNYHGKEALKKFLRQNESDQEELMKKLQDKLM---ADEAADKESESEP 396

Query: 1084 TDESA-----SSPNTDTSESDEMAETEIASVA 1164
             +E +     S  NTD    DE    ++ + A
Sbjct: 397  EEEDSLRVVVSPDNTD----DESTAPDVVAAA 424


>ref|XP_003595205.1| RecA [Medicago truncatula] gi|355484253|gb|AES65456.1| RecA [Medicago
            truncatula]
          Length = 424

 Score =  441 bits (1135), Expect = e-121
 Identities = 224/380 (58%), Positives = 291/380 (76%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            +SKS G+D   ++++S+KD+AL++A+ QI+S FGK +IMWLGR    +NVP +STGS +L
Sbjct: 47   RSKSDGSD-SGEENMSKKDLALQQAMDQITSTFGKGSIMWLGRTVSPKNVPVVSTGSFAL 105

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ALGI GLPKGRVVEI+GPEASGKTTL+LHVIAE+Q+ GGYCAFIDAEHALD +LAESI
Sbjct: 106  DIALGIFGLPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHALDKSLAESI 165

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 166  GVNTENLLLSQPDCGEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQ 225

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL  SL+ SQ ++IF NQ+R K+STFGG FGGP EVT GGNALKFY+SVRL
Sbjct: 226  ARLMSQALRKLCHSLSLSQCILIFINQVRSKISTFGG-FGGPTEVTCGGNALKFYSSVRL 284

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++R+G++KKG++  GSQVL+KVVKNK APP KTA+ E+EFG+GI  EAE+++L  K   
Sbjct: 285  NIKRVGFVKKGEETVGSQVLVKVVKNKHAPPFKTAQFELEFGKGICREAEIIELSIKHKF 344

Query: 904  ITKSGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIEN 1083
            I KSGSFY  N    HGKDA K +L   + ++  L ++++E L +A T+ ++  +  + +
Sbjct: 345  IKKSGSFYEYNGKNYHGKDALKSHLINGDGLQ-DLTTKLREKLLNAETETVSESQEMVGD 403

Query: 1084 TDESASSPNTDTSESDEMAE 1143
              E   SP++   E+  +AE
Sbjct: 404  VTEEMLSPDSTDEETAVVAE 423


>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
            protein product [Vitis vinifera]
          Length = 421

 Score =  441 bits (1135), Expect = e-121
 Identities = 226/378 (59%), Positives = 287/378 (75%), Gaps = 1/378 (0%)
 Frame = +1

Query: 4    KSKSFGNDLPSDDSLSEKDVALREALTQISSNFGKEAIMWLGRFNGSRNVPAISTGSVSL 183
            +SKS G+D  ++++LS+K++ALR+AL QI+++FGK +IMWLGR   S++VP +STGS +L
Sbjct: 42   RSKSDGSD-SNEENLSKKELALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFAL 100

Query: 184  DVALGIGGLPKGRVVEIYGPEASGKTTLSLHVIAESQRNGGYCAFIDAEHALDPTLAESI 363
            D+ LGIGGLPKGRVVEIYGPEASGKTTL+LHVIAE+Q+ GGYC F+DAEHALDP LAE+I
Sbjct: 101  DIVLGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDPALAEAI 160

Query: 364  GVDTNNLLLAQPDCGEQALSVVDTLVRCGXXXXXXXXXXXXXXPKSELEGEMGDAHMALQ 543
            GV+T NLLL+QPDCGEQALS+VDTL+R G              PK EL+GEMGDAHMA+Q
Sbjct: 161  GVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKGELDGEMGDAHMAMQ 220

Query: 544  ARLMSQALRKLTPSLARSQTLVIFTNQIRHKLSTFGGSFGGPAEVTAGGNALKFYASVRL 723
            ARLMSQALRKL+ SL+ SQT++IF NQ+R KLSTFGG FGGP EVT GGNALKFYASVRL
Sbjct: 221  ARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFGG-FGGPTEVTCGGNALKFYASVRL 279

Query: 724  NVRRIGYIKKGDQVTGSQVLIKVVKNKLAPPLKTAELEIEFGRGISSEAEVLDLGCKQGL 903
            N++RIG +KKG++  GSQVL+KVVKNK APP KTA+ E+EFG+GI  E+E+++LGCK   
Sbjct: 280  NIKRIGLVKKGEETIGSQVLVKVVKNKHAPPFKTAQFELEFGKGICRESEIVELGCKHKF 339

Query: 904  ITK-SGSFYTINEHRVHGKDAAKEYLKENEEVKYALYSEIKENLFHASTDNINGKEGDIE 1080
            I K  G+ Y+ N     GKDA K++L +NE  +  L  +++E L   +      KE + E
Sbjct: 340  IIKGGGAMYSYNGQSFRGKDAIKQFLSQNESEREELMRKLREKLVGETNKE---KELEAE 396

Query: 1081 NTDESASSPNTDTSESDE 1134
              DE  +        +DE
Sbjct: 397  AVDEDIAEGTVPPDTTDE 414