BLASTX nr result
ID: Ephedra25_contig00003900
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00003900 (1511 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 271 7e-70 gb|AAO73529.1| gag-pol polyprotein [Glycine max] 270 9e-70 emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera] 269 3e-69 gb|AAO73521.1| gag-pol polyprotein [Glycine max] 268 5e-69 gb|AAO73527.1| gag-pol polyprotein [Glycine max] 268 5e-69 gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera... 267 8e-69 gb|AAO73523.1| gag-pol polyprotein [Glycine max] 267 8e-69 gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana] 267 8e-69 gb|AAP53706.1| retrotransposon protein, putative, unclassified [... 267 1e-68 gb|ABA98230.2| retrotransposon protein, putative, unclassified [... 267 1e-68 gb|AAO73525.1| gag-pol polyprotein [Glycine max] 267 1e-68 emb|CAE04852.2| OSJNBa0084K01.24 [Oryza sativa Japonica Group] 265 3e-68 emb|CAN66523.1| hypothetical protein VITISV_014781 [Vitis vinifera] 264 7e-68 emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group] 264 7e-68 gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group] 264 9e-68 gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-... 264 9e-68 emb|CAN73851.1| hypothetical protein VITISV_035861 [Vitis vinifera] 264 9e-68 emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera] 264 9e-68 gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subc... 264 9e-68 gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group] 263 1e-67 >gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic [Medicago truncatula] Length = 1715 Score = 271 bits (692), Expect = 7e-70 Identities = 133/283 (46%), Positives = 191/283 (67%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 LK FLG+QI + + G+++ + Y K +L+KF + CK +T M L K++ G +D+ Sbjct: 1434 LKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQ 1493 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YR MIG L+Y TASR +I F+V L +RFQ P++ HL AVK I YLKGT +LG+ YR Sbjct: 1494 KLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1553 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + LIGF DAD AGD ++KSTSG C LGENLI+W+S +Q +A+ST E+EYI+A+ Sbjct: 1554 KSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAA 1613 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C TQ +W+K+ L + + IPI+CDN + I +SKN ++H R KHI+I++H+I V Sbjct: 1614 SCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAVICLSKNPILHSRAKHIEIKHHFIRDYV 1672 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNMHYLDD 659 I+ IQ++ T +Q ADIFTK LS +RF +++ LNMH++ D Sbjct: 1673 QKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNMHFVSD 1715 >gb|AAO73529.1| gag-pol polyprotein [Glycine max] Length = 1577 Score = 270 bits (691), Expect = 9e-70 Identities = 140/283 (49%), Positives = 192/283 (67%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+Q++++++ I LS+ Y KN+++KFGM T T L L KDE G S+D+ Sbjct: 1295 LTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQ 1354 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 + YRSMIG L+Y TASR +IT+AV + +R+Q +PK HL VK I+ Y+ GT D GI Y Sbjct: 1355 SLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYC 1414 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 G L+G+ DAD AG +D+KSTSG CF LG NLI+W S KQ CV+LST E+EYIAA Sbjct: 1415 HCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1474 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 +Q VW+K L + + ++CDN SAI++SKN V H RTKHIDI++HYI + V Sbjct: 1475 SSCSQLVWMKQMLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELV 1533 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNMHYLDD 659 DK+I++++V T Q+ADIFTKAL +F LR KL + L++ Sbjct: 1534 DDKVITLEHVDTEEQIADIFTKALDAKQFEKLRGKLGICLLEE 1576 >emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera] Length = 334 Score = 269 bits (687), Expect = 3e-69 Identities = 136/280 (48%), Positives = 193/280 (68%), Gaps = 2/280 (0%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L FLG+QI++++ G +++ Y+K++L++F M + K T M++ + L DE GKSID Sbjct: 55 LNXFLGLQIKQLKEGTFINQAKYIKDLLKRFNMEEAKVMKTPMSSSIKLDMDEKGKSIDS 114 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 T YR MIG L+Y TASR +I ++V L +RFQ PK+ HL VK I+ YLKGT+++G+WY Sbjct: 115 TMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCPKESHLSXVKRILRYLKGTMNIGLWYP 174 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + LIGFSDAD AG ++KSTSG C LG +L++W S KQ VALST E+EYIAA Sbjct: 175 KGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTAEAEYIAAG 234 Query: 967 *CTTQAVWLKN*LA--NLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQ 794 C Q +W+K L+ NL F E +PI CDN SAI++SKN V H RTKHI+I++H++ Sbjct: 235 LCCAQILWMKQTLSDFNLSF---EHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRD 291 Query: 793 KVHDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 I++++VST +QLADIFTK LS+++F +R +L + Sbjct: 292 HAQKGDITLEFVSTKDQLADIFTKPLSEEQFSDIRRQLGV 331 >gb|AAO73521.1| gag-pol polyprotein [Glycine max] Length = 1574 Score = 268 bits (685), Expect = 5e-69 Identities = 139/283 (49%), Positives = 191/283 (67%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+Q++++++ I LS+ Y KN+++KFGM T T L L KDE G S+D+ Sbjct: 1292 LTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQ 1351 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 + YRSMIG L+Y TASR +IT+AV + +R+Q +PK HL VK I+ Y+ GT D GI Y Sbjct: 1352 SLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYC 1411 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 L+G+ DAD AG +D+KSTSG CF LG NLI+W S KQ CV+LST E+EYIAA Sbjct: 1412 HCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1471 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 +Q VW+K L + + ++CDN SAI++SKN V H RTKHIDI++HYI V Sbjct: 1472 SSCSQLVWMKQMLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLV 1530 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNMHYLDD 659 DK+I++++V T Q+ADIFTKAL ++F LR KL + L++ Sbjct: 1531 DDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICLLEE 1573 >gb|AAO73527.1| gag-pol polyprotein [Glycine max] Length = 1576 Score = 268 bits (685), Expect = 5e-69 Identities = 139/283 (49%), Positives = 191/283 (67%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+Q++++++ I LS+ Y KN+++KFGM T T L L KDE G S+D+ Sbjct: 1294 LTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQ 1353 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 + YRSMIG L+Y TASR +IT+AV + +R+Q +PK HL VK I+ Y+ GT D GI Y Sbjct: 1354 SLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMYC 1413 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 L+G+ DAD AG +D+KSTSG CF LG NLI+W S KQ CV+LST E+EYIAA Sbjct: 1414 HCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1473 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 +Q VW+K L + + ++CDN SAI++SKN V H RTKHIDI++HYI V Sbjct: 1474 SSCSQLVWMKQMLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLV 1532 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNMHYLDD 659 DK+I++++V T Q+ADIFTKAL ++F LR KL + L++ Sbjct: 1533 DDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICLLEE 1575 >gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative [Medicago truncatula] Length = 1654 Score = 267 bits (683), Expect = 8e-69 Identities = 132/283 (46%), Positives = 190/283 (67%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 LK FL +QI + + G+++ + Y K +L+KF + CK T M L K++ G +D+ Sbjct: 1373 LKFFLVIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMYTPMHPTCTLSKEDTGTVVDQ 1432 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YR MIG L+Y TASR +I F+V L +RFQ P++ HL AVK I YLKGT +LG+ YR Sbjct: 1433 KLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKIIFRYLKGTTNLGLLYR 1492 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + LIGF DAD AGD ++KSTSG C LGENLI+W+S +Q +A+ST E+EYI+A+ Sbjct: 1493 KSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQVTIAMSTAEAEYISAA 1552 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C TQ +W+K+ L + + IPI+CDN +AI +SKN ++H R KHI+I++H+I V Sbjct: 1553 SCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYV 1611 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNMHYLDD 659 I+ +Q++ T +Q ADIFTK LS +RF +++ LNMH++ D Sbjct: 1612 QKGILDLQFIDTEHQWADIFTKPLSVERFDFIKKNLNMHFVSD 1654 >gb|AAO73523.1| gag-pol polyprotein [Glycine max] Length = 1576 Score = 267 bits (683), Expect = 8e-69 Identities = 139/283 (49%), Positives = 190/283 (67%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+Q++++++ I LS+ Y KN+++KFGM T T L L KDE G S+D+ Sbjct: 1294 LTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQ 1353 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YRSMIG L+Y TASR +IT+AV + +R+Q +PK HL VK I+ Y+ GT D GI Y Sbjct: 1354 KPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYC 1413 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 L+G+ DAD AG +D+KSTSG CF LG NLI+W S KQ CV+LST E+EYIAA Sbjct: 1414 HCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAG 1473 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 +Q VW+K L + + ++CDN SAI++SKN V H RTKHIDI++HYI V Sbjct: 1474 SSCSQLVWMKQMLKEYNVE-QDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDLV 1532 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNMHYLDD 659 DK+I++++V T Q+ADIFTKAL ++F LR KL + L++ Sbjct: 1533 DDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGICVLEE 1575 >gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana] Length = 1463 Score = 267 bits (683), Expect = 8e-69 Identities = 129/272 (47%), Positives = 186/272 (68%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 + HFLG+QI++ G+H+S+ Y + ++Q+FGM K T M+ L DE G S+D+ Sbjct: 1193 MNHFLGLQIKQTDEGVHISQSMYAQGLIQRFGMQTAKTSKTPMSATAKLSADEAGLSVDE 1252 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YR MIG L+Y TASR ++ F+V + +R+Q +PK HL A+K I+ Y+KGT D+G++Y Sbjct: 1253 KMYRGMIGSLLYLTASRPDLCFSVGVCARYQANPKQSHLNAMKWILKYVKGTTDVGLFYS 1312 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + NL+GF DAD AG+ +D++ST+G CF L NL++W S KQ CV+LST E+EYIA Sbjct: 1313 KQTNQNLVGFCDADWAGNLDDRRSTTGGCFFLRNNLVSWHSKKQSCVSLSTAEAEYIALG 1372 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C TQ +W+K L + G + ++CDN SAI++SKN V H RTKHIDI++H+I + V Sbjct: 1373 SCCTQLLWMKQMLLDYGM-TSNTLLVYCDNMSAINISKNPVQHSRTKHIDIRHHFIRELV 1431 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYL 692 +KI+ I +VS+ QLADIFTK+L + FL L Sbjct: 1432 ENKIVEISHVSSEKQLADIFTKSLDLNSFLNL 1463 >gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1419 Score = 267 bits (682), Expect = 1e-68 Identities = 136/278 (48%), Positives = 186/278 (66%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+QI++ G + + Y K++L++F M CKP ST + + VL DE+G+++D+ Sbjct: 1136 LSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAVDQ 1195 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 +YRSMIG L+Y TASR +I FAV L +RFQ SP+ H AVK IM YL TL+ GIWY Sbjct: 1196 KEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGIWYS 1255 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 I L G+SDAD G D+KSTSG C LG +LI WSS KQ VA ST ESEY+AA+ Sbjct: 1256 TSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVAAA 1315 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C +Q +WL + L + G E +P+FCDN SAI+++KN V H RTKHIDI++H++ V Sbjct: 1316 SCCSQILWLLSTLKDYGI-TFEKVPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHV 1374 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 + +Q++ T Q+ADIFTK L +RF +LR +L + Sbjct: 1375 EKGDVELQFLDTKLQIADIFTKPLDSNRFAFLRGELGV 1412 >gb|ABA98230.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1463 Score = 267 bits (682), Expect = 1e-68 Identities = 136/278 (48%), Positives = 186/278 (66%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+QI++ G + + Y K++L++F M CKP ST + + VL DE+G+++D+ Sbjct: 1180 LSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAVDQ 1239 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 +YRSMIG L+Y TASR +I FAV L +RFQ SP+ H AVK IM YL TL+ GIWY Sbjct: 1240 KEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGIWYS 1299 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 I L G+SDAD G D+KSTSG C LG +LI WSS KQ +A ST ESEY+AA+ Sbjct: 1300 TSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSIAQSTAESEYVAAA 1359 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C +Q +WL + L + G E IP+FCDN SAI+++KN V H RTKHIDI++H++ V Sbjct: 1360 SCCSQILWLLSTLKDYGL-TFEKIPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHV 1418 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 + +Q++ T Q+ADIFTK L +RF +LR +L + Sbjct: 1419 EKGDVELQFLDTKLQIADIFTKPLDSNRFAFLRGELGV 1456 >gb|AAO73525.1| gag-pol polyprotein [Glycine max] Length = 1576 Score = 267 bits (682), Expect = 1e-68 Identities = 141/283 (49%), Positives = 188/283 (66%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+Q++++++ I LS+ Y KN+++KFGM T T L L KDE G S+D+ Sbjct: 1294 LHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQ 1353 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YRSMIG L+Y TASR +ITFAV + +R+Q +PK HL VK I+ Y+ GT D GI Y Sbjct: 1354 NLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMYC 1413 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 L+G+ DAD AG +D+K TSG CF LG NLI+W S KQ CV+LST E+EYIAA Sbjct: 1414 HCSDSMLVGYCDADWAGSADDRKCTSGGCFYLGTNLISWFSKKQNCVSLSTAEAEYIAAG 1473 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 +Q VW+K L + + ++CDN SAI++SKN V H RTKHIDI++HYI V Sbjct: 1474 SSCSQLVWMKQMLKEYNVE-QDVMTLYCDNMSAINISKNPVQHNRTKHIDIRHHYIRDLV 1532 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNMHYLDD 659 DKII++++V T Q+ADIFTKAL ++F LR KL L+D Sbjct: 1533 DDKIITLEHVDTEEQVADIFTKALDANQFEKLRGKLGTCLLED 1575 >emb|CAE04852.2| OSJNBa0084K01.24 [Oryza sativa Japonica Group] Length = 543 Score = 265 bits (678), Expect = 3e-68 Identities = 132/279 (47%), Positives = 190/279 (68%) Frame = -2 Query: 1510 ILKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSID 1331 +L FLG+QI+++++G+ +S+ Y+K++L++FG+ KP T MAT L DE GK +D Sbjct: 259 VLSFFLGLQIKQLKDGMFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKLVD 318 Query: 1330 KTQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWY 1151 YRSMIG L+Y T SR +I F+V + +RFQ +PK+CHL+AVK I+ YLK + +G+WY Sbjct: 319 LKLYRSMIGSLLYFTVSRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWY 378 Query: 1150 RRDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAA 971 + L+G+SD+D AG D+KSTSG C MLG +L++WSS KQ VALST E+EY++A Sbjct: 379 PKGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSA 438 Query: 970 S*CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQK 791 C Q +W+K L + G + + + CDN SAI ++ N V H RTKHIDI++H++ Sbjct: 439 GSCCAQLLWMKQTLLDYGISFTKTL-LLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDH 497 Query: 790 VHDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 V I I ++ T +QLADIFTK L + RF LRN+LN+ Sbjct: 498 VAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNV 536 >emb|CAN66523.1| hypothetical protein VITISV_014781 [Vitis vinifera] Length = 334 Score = 264 bits (675), Expect = 7e-68 Identities = 136/280 (48%), Positives = 192/280 (68%), Gaps = 2/280 (0%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L FLG+QI+ ++ G +++ Y++++L++F M + K T M++ + L KDE GKSID Sbjct: 55 LNFFLGLQIKHLKEGTFINQPKYIRDLLKRFNMEEAKTMKTPMSSSIKLDKDEKGKSIDS 114 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 T YR MIG L+Y TASR +I +V L +RFQ PK+ HL AVK I+ YLKGT+D+G+WY Sbjct: 115 TMYRGMIGSLLYLTASRPDIMNSVCLCARFQSCPKESHLSAVKRILRYLKGTMDIGLWYP 174 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + LIG+SDAD AG ++KSTSG C LG +L++W S KQ VALS VE+EYIAA Sbjct: 175 KGDNFELIGYSDADFAGCKVERKSTSGTCHFLGHSLVSWHSKKQILVALSMVEAEYIAAG 234 Query: 967 *CTTQAVWLKN*L--ANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQ 794 C Q +W+K L NL F E +PI CDN SAI++SKN V H RTKHI+I++H++ Sbjct: 235 LCCAQILWMKQTLNDFNLSF---EHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLRD 291 Query: 793 KVHDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 I++++VST +Q ADIFTK LS+++F+ +R +L + Sbjct: 292 HAQKGDITLEFVSTKDQPADIFTKPLSEEQFVDIRRQLGV 331 >emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group] Length = 711 Score = 264 bits (675), Expect = 7e-68 Identities = 132/278 (47%), Positives = 189/278 (67%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L FLG+QI+++++G+ +S+ Y+K++L++FG+ KP T MAT L DE GK +D Sbjct: 428 LSFFLGLQIKQLKDGMFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKLVDL 487 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YRSMIG L+Y T SR +I F+V + +RFQ +PK+CHL+AVK I+ YLK + +G+WY Sbjct: 488 KLYRSMIGSLLYFTVSRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYP 547 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + L+G+SD+D AG D+KSTSG C MLG +L++WSS KQ VALST E+EY++A Sbjct: 548 KGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAG 607 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C Q +W+K L + G + + + CDN SAI ++ N V H RTKHIDI++H++ V Sbjct: 608 SCCAQLLWMKQTLLDYGISFTKTL-LLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHV 666 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 I I ++ T +QLADIFTK L + RF LRN+LN+ Sbjct: 667 AKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNV 704 >gb|AAO37468.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1128 Score = 264 bits (674), Expect = 9e-68 Identities = 133/279 (47%), Positives = 187/279 (67%), Gaps = 1/279 (0%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L FLG+QI+++++G +S+ Y+K++L++FG+ KP T MAT L DE GK +D Sbjct: 843 LSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNWHLDLDEGGKPVDL 902 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YRSMIG L+Y TASR +I F+V + +RFQ +PK+CHL+AVK I+ YLK + + +WY Sbjct: 903 KLYRSMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISLWYP 962 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + L+G+SD+D AG D+KSTSG C MLG +L++WSS KQ VALST E+EYI+A Sbjct: 963 KGAKFKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAG 1022 Query: 967 *CTTQAVWLKN*LANLGFHIIE-PIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQK 791 C Q +W+K L + G E P+ C+N S I ++ N V H RTKHIDI++H++ Sbjct: 1023 SCCAQLLWMKQILLDYGISFTETQTPLLCNNDSTIKIANNPVQHFRTKHIDIRHHFLTDH 1082 Query: 790 VHDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 V I I ++ T +QLADIFTK L + RF LRN+LN+ Sbjct: 1083 VAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNV 1121 >gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77552672|gb|ABA95469.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 709 Score = 264 bits (674), Expect = 9e-68 Identities = 136/278 (48%), Positives = 185/278 (66%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+QI++ G + + Y K++L++F M CKP ST + + VL DE+GK++D+ Sbjct: 426 LSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGKAVDQ 485 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 +YRSMIG L+Y TASR +I FAV L +RFQ SP+ H AVK IM YL TL+ GIWY Sbjct: 486 KEYRSMIGSLLYLTASRPDIQFAVCLRARFQASPRASHRQAVKRIMRYLNHTLEFGIWYS 545 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 I L G+SDAD G D+KSTSG C LG +LI WSS KQ VA ST ESEY+AA+ Sbjct: 546 TSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVAAA 605 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C +Q +WL + L + G E + +FCDN SAI+++KN V H RTKHIDI++H++ V Sbjct: 606 SCCSQILWLLSTLKDYGL-TFEKVHLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHV 664 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 + +Q++ T Q+ADIFTK L +RF +LR +L + Sbjct: 665 EKGDVELQFLDTNLQIADIFTKPLDSNRFAFLRGELGI 702 >emb|CAN73851.1| hypothetical protein VITISV_035861 [Vitis vinifera] Length = 354 Score = 264 bits (674), Expect = 9e-68 Identities = 134/278 (48%), Positives = 191/278 (68%), Gaps = 2/278 (0%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG+QI++++ G +++ Y+K++L++F M + K T M++ + L DE GKSID Sbjct: 55 LNYFLGLQIKQLKEGTFINQAKYIKDLLKRFNMEEAKVMKTPMSSSIKLDMDEKGKSIDS 114 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 T YR MIG L+Y TASR +I ++V L +RFQ K+ HL AVK I+ YLKGT+++G+WY Sbjct: 115 TMYRGMIGSLLYLTASRPDIMYSVCLCARFQSCSKESHLSAVKRILRYLKGTMNIGLWYP 174 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + LIGFSDAD AG ++KSTSG C LG +L++W S KQ VALST E+EYIAA Sbjct: 175 KGDNFELIGFSDADFAGCRVERKSTSGTCHFLGHSLVSWHSKKQNSVALSTTEAEYIAAG 234 Query: 967 *CTTQAVWLKN*LA--NLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQ 794 C Q +W+K L+ NL F E +PI CDN SAI++SKN V H RTKHI+I++H++ Sbjct: 235 LCCAQILWMKQTLSDFNLSF---EHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLKD 291 Query: 793 KVHDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKL 680 I++++VS +QL DIFTK LS+++F +R +L Sbjct: 292 HAQKCDITLEFVSIKDQLDDIFTKPLSEEQFSNIRRQL 329 >emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera] Length = 324 Score = 264 bits (674), Expect = 9e-68 Identities = 131/278 (47%), Positives = 190/278 (68%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L +FLG Q++++++GI LS+ Y + +++ FG+ K T M T L L KDE+ K +++ Sbjct: 44 LTYFLGFQVKQLKDGIFLSQSKYARELVKXFGLESTKHFRTPMPTNLKLSKDESXKGVEE 103 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 T YRSMIG L+Y TASR +I F+V + +R+Q PK+ HLIA+K I+ Y+ GTL+LG+WY Sbjct: 104 TLYRSMIGSLLYLTASRPDIAFSVGVCARYQACPKESHLIALKRIIRYIAGTLELGLWYP 163 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 D ++ ++DAD AG+ +D+KSTSG CF +G L+ W S KQ V+LST E+EYIAA Sbjct: 164 FDTHSDVACYTDADWAGNVDDRKSTSGGCFYIGNCLVAWMSKKQNSVSLSTAEAEYIAAG 223 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C +Q +W+K L + G + +FCDN SAI++SKN V+H RTKHIDI++H+I V Sbjct: 224 SCCSQLLWIKQMLRDYGID-QGTMVVFCDNTSAINISKNPVLHSRTKHIDIRHHFIRDLV 282 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 DK++S++YV T Q+ADI TK L RF LR + + Sbjct: 283 EDKVVSLEYVPTEGQIADILTKPLDVSRFESLRKSIGL 320 >gb|ABF96984.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1115 Score = 264 bits (674), Expect = 9e-68 Identities = 133/279 (47%), Positives = 187/279 (67%), Gaps = 1/279 (0%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L FLG+QI+++++G +S+ Y+K++L++FG+ KP T MAT L DE GK +D Sbjct: 830 LSFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNWHLDLDEGGKPVDL 889 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YRSMIG L+Y TASR +I F+V + +RFQ +PK+CHL+AVK I+ YLK + + +WY Sbjct: 890 KLYRSMIGSLLYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISLWYP 949 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + L+G+SD+D AG D+KSTSG C MLG +L++WSS KQ VALST E+EYI+A Sbjct: 950 KGAKFKLVGYSDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAG 1009 Query: 967 *CTTQAVWLKN*LANLGFHIIE-PIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQK 791 C Q +W+K L + G E P+ C+N S I ++ N V H RTKHIDI++H++ Sbjct: 1010 SCCAQLLWMKQILLDYGISFTETQTPLLCNNDSTIKIANNPVQHFRTKHIDIRHHFLTDH 1069 Query: 790 VHDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 V I I ++ T +QLADIFTK L + RF LRN+LN+ Sbjct: 1070 VAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNV 1108 >gb|AAV31277.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1577 Score = 263 bits (673), Expect = 1e-67 Identities = 132/278 (47%), Positives = 185/278 (66%) Frame = -2 Query: 1507 LKHFLGVQIRKIQNGIHLSRGTYLKNMLQKFGMLQCKPHSTLMATRLVLHKDENGKSIDK 1328 L FLG+QI++++NG +S+ Y+K++L++FG+ KP T MAT L DE GK +D Sbjct: 1294 LSFFLGLQIKQLKNGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDL 1353 Query: 1327 TQYRSMIGCLMYATASRSEITFAVSLVSRFQESPKDCHLIAVKCIMHYLKGTLDLGIWYR 1148 YRSMIG L+Y T SR +I F+V + +RFQ +PK+CHL+AVK I+ YLK + +G+WY Sbjct: 1354 KLYRSMIGSLLYLTVSRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYP 1413 Query: 1147 RDKGINLIGFSDAD*AGDHNDQKSTSGQCFMLGENLITWSSHKQECVALSTVESEYIAAS 968 + L+G+SD D AG D+KSTS C MLG +L++WSS KQ VALST E+EY++A Sbjct: 1414 KGAKFKLVGYSDPDYAGCKVDRKSTSSSCQMLGRSLVSWSSKKQNSVALSTAETEYVSAG 1473 Query: 967 *CTTQAVWLKN*LANLGFHIIEPIPIFCDNQSAISMSKNSVMHKRTKHIDIQYHYICQKV 788 C Q +W+K L + G + P+ CDN AI ++ N V H RTKHIDI++H++ V Sbjct: 1474 SCCAQLLWMKQTLLDYGISFTK-TPLLCDNDGAIKIANNPVQHSRTKHIDIRHHFLRDHV 1532 Query: 787 HDKIISIQYVSTWNQLADIFTKALSKDRFLYLRNKLNM 674 I I ++ T +QLADIFTK L + RF LRN+LN+ Sbjct: 1533 AKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNI 1570