BLASTX nr result
ID: Ephedra25_contig00003269
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00003269
(802 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002519978.1| ATP-dependent Clp protease proteolytic subun... 279 7e-73
dbj|BAN16907.1| ATP-dependent Clp protease proteolytic subunit (... 162 2e-37
dbj|BAH11204.1| ATP-dependent Clp protease proteolytic subunit (... 136 7e-30
ref|YP_001876601.1| ATP-dependent clp protease proteolytic subun... 136 7e-30
gb|ABY84438.1| ATP-dependent protease proteolytic subunit [Oenot... 116 8e-24
ref|YP_004021760.1| clp protease proteolytic subunit [Equisetum ... 115 2e-23
ref|YP_004276301.1| ATP-dependent Clp protease proteolytic subun... 115 2e-23
ref|YP_007374739.1| ATP-dependent Clp protease proteolytic subun... 114 3e-23
gb|EWM25441.1| atp-dependent clp protease proteolytic subunit [N... 114 4e-23
ref|NP_817171.1| ATP-dependent Clp protease proteolytic subunit ... 114 4e-23
ref|YP_004276371.1| ATP-dependent Clp protease proteolytic subun... 114 5e-23
ref|NP_569653.1| ATP-dependent Clp protease proteolytic subunit ... 113 7e-23
ref|YP_003934209.1| ATP-dependent Clp protease proteolytic subun... 113 9e-23
ref|YP_636436.1| ATP-dependent Clp protease proteolytic subunit ... 112 1e-22
gb|ADO33472.1| clp protease proteolytic subunit [Smilax china] 112 2e-22
ref|YP_567102.1| ATP-dependent Clp protease proteolytic subunit ... 112 2e-22
ref|NP_904123.1| ATP-dependent Clp protease proteolytic subunit ... 112 2e-22
gb|ACP51518.1| ATP-dependent Clp protease proteolytic subunit [P... 112 2e-22
ref|NP_050836.1| ATP-dependent Clp protease proteolytic subunit ... 111 3e-22
ref|NP_777437.1| ATP-dependent Clp protease proteolytic subunit ... 111 3e-22
>ref|YP_002519978.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ephedra equisetina] gi|220983579|dbj|BAH11346.1|
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Ephedra equisetina]
Length = 221
Score = 279 bits (714), Expect = 7e-73
Identities = 138/138 (100%), Positives = 138/138 (100%)
Frame = +3
Query: 387 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 566
MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD
Sbjct: 1 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 60
Query: 567 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 746
IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK
Sbjct: 61 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 120
Query: 747 DAFFVQQLRKMIVQCYCL 800
DAFFVQQLRKMIVQCYCL
Sbjct: 121 DAFFVQQLRKMIVQCYCL 138
>dbj|BAN16907.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gnetum ula]
Length = 264
Score = 162 bits (409), Expect = 2e-37
Identities = 75/138 (54%), Positives = 103/138 (74%)
Frame = +3
Query: 387 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 566
M +TRCIFLGQP+ +G VG+LL + DI + ++R IF+YINSCGGAI+ GLSI+D
Sbjct: 1 MCQTRCIFLGQPLTTPLGGFIVGLLLSYYFSDIAEYRNRPIFVYINSCGGAIMAGLSIYD 60
Query: 567 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 746
+++++E ++T GLG+VAST+TLVL AG + FR P+SRIMIHQPRA +R AW F +
Sbjct: 61 TIMKIKERVYTTGLGIVASTSTLVLIAGAYSFRYAAPNSRIMIHQPRARIRHEAAWRFVR 120
Query: 747 DAFFVQQLRKMIVQCYCL 800
+A FV QLRK ++ CY +
Sbjct: 121 NAEFVTQLRKHLLHCYAM 138
>dbj|BAH11204.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Welwitschia mirabilis]
Length = 254
Score = 136 bits (343), Expect = 7e-30
Identities = 66/148 (44%), Positives = 101/148 (68%)
Frame = +3
Query: 357 VLDWADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGG 536
+LD++DL D+M+ RC+F+ P+ E+ G + + L Y F +D+ + ++R +F+YINS GG
Sbjct: 1 MLDFSDLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGG 60
Query: 537 AILPGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASL 716
A + GL+I D M+ ++E + TI LG+VAST TL L+AGT G R+ P+S IM+HQP A L
Sbjct: 61 AFMMGLTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADL 120
Query: 717 RDGPAWLFAKDAFFVQQLRKMIVQCYCL 800
+ A F K++ V QLR+ +VQ Y +
Sbjct: 121 DNTSASEFVKESEEVNQLRRKMVQSYAI 148
>ref|YP_001876601.1| ATP-dependent clp protease proteolytic subunit [Welwitschia
mirabilis] gi|163311656|gb|ABY26814.1| ATP-dependent clp
protease proteolytic subunit [Welwitschia mirabilis]
Length = 254
Score = 136 bits (343), Expect = 7e-30
Identities = 66/148 (44%), Positives = 101/148 (68%)
Frame = +3
Query: 357 VLDWADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGG 536
+LD++DL D+M+ RC+F+ P+ E+ G + + L Y F +D+ + ++R +F+YINS GG
Sbjct: 1 MLDFSDLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGG 60
Query: 537 AILPGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASL 716
A + GL+I D M+ ++E + TI LG+VAST TL L+AGT G R+ P+S IM+HQP A L
Sbjct: 61 AFMMGLTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADL 120
Query: 717 RDGPAWLFAKDAFFVQQLRKMIVQCYCL 800
+ A F K++ V QLR+ +VQ Y +
Sbjct: 121 DNTSASEFVKESEEVNQLRRKMVQSYAI 148
>gb|ABY84438.1| ATP-dependent protease proteolytic subunit [Oenothera fruticosa]
Length = 295
Score = 116 bits (291), Expect = 8e-24
Identities = 59/143 (41%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W DL++++ R R +FLGQ +D ++G+ VG+++YL ID+ + +INS GG +
Sbjct: 20 WLDLFNILYRKRILFLGQEIDVELGNHIVGLMVYLGIDN----PFLDMIFFINSPGGLAI 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG I+DIM ++ ++TIGLG+VAS A+L+LS G G R G + RIMIHQP S R
Sbjct: 76 PGFGIYDIMQYIKPNVYTIGLGVVASMASLILSGGGKGKRIGGKNMRIMIHQPAMSYRKD 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
P ++A + LR +++CY
Sbjct: 136 PLRTILREAEGMSCLRTQVLKCY 158
>ref|YP_004021760.1| clp protease proteolytic subunit [Equisetum arvense]
gi|281371626|gb|ADA63559.1| clp protease proteolytic
subunit (chloroplast) [Equisetum arvense]
gi|359751569|gb|AEV58363.1| clp protease proteolytic
subunit [Equisetum arvense]
Length = 204
Score = 115 bits (288), Expect = 2e-23
Identities = 60/143 (41%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W D+Y+ + R R +FLGQ VD++I + VGI++YL +D +R +++YINS GGA+L
Sbjct: 20 WIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGED----DTRDLYLYINSPGGAVL 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG+S++D M + +HTI +GL AS + +L+ G R PH+RIMIHQP +S DG
Sbjct: 76 PGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPHARIMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
A +A + +LR I + Y
Sbjct: 136 QAGECVLEAEEISKLRDCITKVY 158
>ref|YP_004276301.1| ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
gi|228016061|gb|ACP50899.1| ATP-dependent Clp protease
proteolytic subunit [Pinus rzedowskii]
gi|323522525|gb|ADX94867.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monophylla]
gi|356996673|gb|AET44589.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus cembroides]
gi|356998049|gb|AET45946.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus remota]
gi|356998195|gb|AET46090.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus quadrifolia]
gi|356998774|gb|AET46661.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus pinceana]
gi|356999502|gb|AET47379.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus maximartinezii]
gi|357000086|gb|AET47955.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus johannis]
gi|357000887|gb|AET48745.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus edulis]
gi|357001182|gb|AET49036.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus discolor]
gi|357001615|gb|AET49463.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus culminicola]
Length = 196
Score = 115 bits (288), Expect = 2e-23
Identities = 55/143 (38%), Positives = 87/143 (60%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W DLY+ + R R +FL Q ++ +I + +G+++YL +D K IF++IN GG+++
Sbjct: 20 WVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DIFLFINCPGGSVI 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG+ +FD+M + +HTI +G+ AS + +L G R PH+R+MIHQP +S DG
Sbjct: 76 PGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
PA F +A + LR I +CY
Sbjct: 136 PAAEFHNEAKHITMLRNYITKCY 158
>ref|YP_007374739.1| ATP-dependent Clp protease proteolytic subunit 1 (chloroplast)
[Equisetum hyemale] gi|441017852|gb|AGC26652.1|
ATP-dependent Clp protease proteolytic subunit 1
(chloroplast) [Equisetum hyemale]
Length = 204
Score = 114 bits (286), Expect = 3e-23
Identities = 60/143 (41%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W D+Y+ + R R +FLGQ VD++I + VGI++YL +D +R +++YINS GGA+L
Sbjct: 20 WIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGED----DTRDLYLYINSPGGAVL 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG+S++D M + +HTI +GL AS + +L+ G R PH+RIMIHQP +S DG
Sbjct: 76 PGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPHARIMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
A +A + +LR I + Y
Sbjct: 136 QAGECVLEAEEILKLRDCITKVY 158
>gb|EWM25441.1| atp-dependent clp protease proteolytic subunit [Nannochloropsis
gaditana]
Length = 302
Score = 114 bits (285), Expect = 4e-23
Identities = 61/144 (42%), Positives = 91/144 (63%)
Frame = +3
Query: 363 DWADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAI 542
DW D+Y+ + R R IFLGQ +D+D + +G+LLYL +D SR I+MYIN GG++
Sbjct: 93 DWVDIYNRLYRERIIFLGQEIDDDYANQIIGVLLYLDQED----SSRPIYMYINCPGGSV 148
Query: 543 LPGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRD 722
+ GL+I+D+M +R I TI +G+ AS A+ +L+AG G R PHSR+MIHQP +
Sbjct: 149 IAGLAIYDVMQLIRSEIVTINIGMAASMASFLLAAGKKGKRLALPHSRVMIHQPMGGAQ- 207
Query: 723 GPAWLFAKDAFFVQQLRKMIVQCY 794
G A +A + +++K +V Y
Sbjct: 208 GQAEDIKVEAAQILRIKKNLVGMY 231
>ref|NP_817171.1| ATP-dependent Clp protease proteolytic subunit [Pinus koraiensis]
gi|237688459|ref|YP_002905078.1| ATP-dependent Clp
protease proteolytic subunit [Picea sitchensis]
gi|237688591|ref|YP_002905208.1| ATP-dependent Clp
protease proteolytic subunit [Pinus gerardiana]
gi|237688659|ref|YP_002905275.1| ATP-dependent Clp
protease proteolytic subunit [Pinus krempfii]
gi|324986358|ref|YP_004276230.1| ATP-dependent Clp
protease proteolytic subunit [Pinus lambertiana]
gi|68052195|sp|Q85X43.1|CLPP_PINKO RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29469692|gb|AAO74020.1| ATP-dependent protease
subunit [Pinus koraiensis] gi|226875288|gb|ACO89027.1|
ATP-dependent Clp protease proteolytic subunit [Picea
sitchensis] gi|226876052|gb|ACO89308.1| ATP-dependent
Clp protease proteolytic subunit [Pinus gerardiana]
gi|226951117|gb|ACO94180.1| ATP-dependent Clp protease
proteolytic subunit [Pinus krempfii]
gi|228016125|gb|ACP50962.1| ATP-dependent Clp protease
proteolytic subunit [Pinus sibirica]
gi|228016182|gb|ACP51018.1| ATP-dependent Clp protease
proteolytic subunit [Pinus squamata]
gi|228016247|gb|ACP51082.1| ATP-dependent Clp protease
proteolytic subunit [Pinus strobus]
gi|228016623|gb|ACP51452.1| ATP-dependent Clp protease
proteolytic subunit [Pinus albicaulis]
gi|228016756|gb|ACP51583.1| ATP-dependent Clp protease
proteolytic subunit [Pinus armandii]
gi|228016879|gb|ACP51704.1| ATP-dependent Clp protease
proteolytic subunit [Pinus ayacahuite]
gi|228017126|gb|ACP51947.1| ATP-dependent Clp protease
proteolytic subunit [Pinus cembra]
gi|228017247|gb|ACP52066.1| ATP-dependent Clp protease
proteolytic subunit [Pinus flexilis]
gi|228017313|gb|ACP52131.1| ATP-dependent Clp protease
proteolytic subunit [Pinus lambertiana]
gi|228017506|gb|ACP52321.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|228017569|gb|ACP52383.1| ATP-dependent Clp protease
proteolytic subunit [Pinus parviflora var. pentaphylla]
gi|228017633|gb|ACP52446.1| ATP-dependent Clp protease
proteolytic subunit [Pinus peuce]
gi|257042530|gb|ACV32804.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042558|gb|ACV32831.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042587|gb|ACV32859.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042617|gb|ACV32888.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042645|gb|ACV32915.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042673|gb|ACV32942.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042702|gb|ACV32970.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042730|gb|ACV32997.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042757|gb|ACV33023.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|257042785|gb|ACV33050.1| ATP-dependent Clp protease
proteolytic subunit [Pinus monticola]
gi|323514207|gb|ADX89754.1| ATP-dependent Clp protease
proteolytic subunit [Pinus lambertiana]
gi|356996600|gb|AET44517.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus chiapensis]
gi|356996819|gb|AET44733.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus bungeana]
gi|356997036|gb|AET44947.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus amamiana]
gi|356997251|gb|AET45159.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus kwangtungensis]
gi|356997323|gb|AET45230.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus wallichiana]
gi|356997686|gb|AET45588.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus strobiformis]
gi|356998341|gb|AET46234.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus pumila]
gi|356999357|gb|AET47236.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus morrisonicola]
gi|357001474|gb|AET49324.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus dalatensis]
gi|357001546|gb|AET49395.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus fenzeliana var.
dabeshanensis]
Length = 196
Score = 114 bits (285), Expect = 4e-23
Identities = 55/143 (38%), Positives = 86/143 (60%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W DLY+ + R R +FL Q ++ +I + +G+++YL +D K IF +IN GG+++
Sbjct: 20 WVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DIFSFINCPGGSVI 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG+ +FD+M + +HTI +G+ AS + +L G R PH+R+MIHQP +S DG
Sbjct: 76 PGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
PA F +A + LR I +CY
Sbjct: 136 PAAEFHNEAKHITMLRNYITKCY 158
>ref|YP_004276371.1| ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
gi|323522689|gb|ADX94937.1| ATP-dependent Clp protease
proteolytic subunit [Pinus nelsonii]
Length = 196
Score = 114 bits (284), Expect = 5e-23
Identities = 55/143 (38%), Positives = 86/143 (60%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W DLY+ + R R +FL Q ++ +I + +G+++YL +D K IF +IN GG+++
Sbjct: 20 WVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DIFSFINCPGGSVI 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG+ +FD+M + +HTI +G+ AS + +L G R PH+R+MIHQP +S DG
Sbjct: 76 PGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
PA F +A + LR I +CY
Sbjct: 136 PAAEFHNEAKHITMLRTYITKCY 158
>ref|NP_569653.1| ATP-dependent Clp protease proteolytic subunit [Psilotum nudum]
gi|22653694|sp|Q8WHZ7.1|CLPP_PSINU RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18389489|dbj|BAB84241.1| ATP-dependent protease
[Psilotum nudum] gi|441018042|gb|AGC26818.1|
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Psilotum nudum]
Length = 198
Score = 113 bits (283), Expect = 7e-23
Identities = 58/143 (40%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W D+Y+ + R R +FLGQ VD++I + +GI++YL +D ++R ++ YINS GGA+L
Sbjct: 20 WVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGED----ENRDMYSYINSPGGAVL 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG+S++D M + +HTI +GL AS + +L+ G R PH+R+MIHQP +S DG
Sbjct: 76 PGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARVMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
A +A + +LR I + Y
Sbjct: 136 QAGECIMEAEEILKLRDCITRVY 158
>ref|YP_003934209.1| ATP-dependent Clp protease proteolytic subunit [Cedrus deodara]
gi|307683285|dbj|BAJ19593.1| ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Cedrus deodara]
Length = 196
Score = 113 bits (282), Expect = 9e-23
Identities = 55/144 (38%), Positives = 88/144 (61%)
Frame = +3
Query: 363 DWADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAI 542
+W DLY+ + R R +FL Q ++ +I + +G+++YL +D K +F ++N GG++
Sbjct: 19 NWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DMFSFLNCPGGSV 74
Query: 543 LPGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRD 722
+PG+ +FD+M + +HTI +G+ AS + +L G R PH+RIMIHQP +S D
Sbjct: 75 IPGVGLFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPHARIMIHQPASSYYD 134
Query: 723 GPAWLFAKDAFFVQQLRKMIVQCY 794
GPA F K++ V LR I +CY
Sbjct: 135 GPAADFHKESKHVTMLRDYITKCY 158
>ref|YP_636436.1| ATP-dependent Clp protease proteolytic subunit [Staurastrum
punctulatum] gi|122211785|sp|Q32RU0.1|CLPP_STAPU
RecName: Full=ATP-dependent Clp protease proteolytic
subunit; AltName: Full=Endopeptidase Clp
gi|61393553|gb|AAX45694.1| proteolytic subunit 2 of clp
protease [Staurastrum punctulatum]
Length = 201
Score = 112 bits (281), Expect = 1e-22
Identities = 59/143 (41%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W D+Y+ + R R +FLGQ VD++I + +GI++YL +D +S+ ++MYINS GGA+L
Sbjct: 20 WVDVYNRLYRERLLFLGQNVDDEIANQLIGIMIYLNGED----ESKDMYMYINSPGGAVL 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
G+S++D M + +HTI +GL AS + +L+ G R PH+R+MIHQP +S DG
Sbjct: 76 AGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARVMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
A +A V +LR I + Y
Sbjct: 136 QAGECMMEAEEVLKLRDCITKVY 158
>gb|ADO33472.1| clp protease proteolytic subunit [Smilax china]
Length = 204
Score = 112 bits (280), Expect = 2e-22
Identities = 57/143 (39%), Positives = 89/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W D+Y+ + R R +FLGQ VD +I + VG+++YL I+D K+R F++INS GG ++
Sbjct: 20 WVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIED----KTRDFFLFINSPGGWVI 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG++I+D M + +HTI +GL AS + +L G R PH+R+MIHQP +S +
Sbjct: 76 PGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEA 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
A F +A + +LR+ I + Y
Sbjct: 136 QAGEFILEAEELLKLRETITKVY 158
>ref|YP_567102.1| ATP-dependent Clp protease proteolytic subunit [Vitis vinifera]
gi|122230336|sp|Q0ZIZ4.1|CLPP_VITVI RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91701674|gb|ABE47558.1| clp protease proteolytic
subunit [Vitis vinifera]
Length = 196
Score = 112 bits (280), Expect = 2e-22
Identities = 55/145 (37%), Positives = 92/145 (63%)
Frame = +3
Query: 360 LDWADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGA 539
+ W D+Y+ + R R +FLGQ V+ +I + +G+++YL I+D +++ ++ +INS GG
Sbjct: 18 ISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIED----ENKDLYFFINSPGGW 73
Query: 540 ILPGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLR 719
+LPG++I+D M + +HTI LGL AS + +L GT R PH+R+MIHQP A+
Sbjct: 74 VLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPHARVMIHQPAAAFY 133
Query: 720 DGPAWLFAKDAFFVQQLRKMIVQCY 794
+ A F +A + +LR++I + Y
Sbjct: 134 EAQAGEFVMEAEELLKLREIITKVY 158
>ref|NP_904123.1| ATP-dependent Clp protease proteolytic subunit [Amborella
trichopoda] gi|68052165|sp|Q70XY2.1|CLPP_AMBTC RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481653|emb|CAD45131.1| ATP-dependent protease
proteolytic subunit [Amborella trichopoda]
Length = 202
Score = 112 bits (279), Expect = 2e-22
Identities = 56/143 (39%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W D+Y+ + R R +FLGQ V+ +I + VG+++YL I+D +R ++++INS GG ++
Sbjct: 20 WVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIED----DTRDLYLFINSPGGWVI 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG++I+D M + +HTI +GL AS + VL+ G R PH+R+MIHQP +S +
Sbjct: 76 PGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPHARVMIHQPASSFYEA 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
PA F +A + +LR+ I Y
Sbjct: 136 PAGEFILEAGELLKLRETITSVY 158
>gb|ACP51518.1| ATP-dependent Clp protease proteolytic subunit [Pinus aristata]
Length = 196
Score = 112 bits (279), Expect = 2e-22
Identities = 53/143 (37%), Positives = 85/143 (59%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W DLY+ + R R +FL Q ++ +I + +G+++YL +D K IF ++N GG+++
Sbjct: 20 WVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DIFSFLNCPGGSVI 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
PG+ +FD+M + +HTI +G+ AS + +L G R PH+R+MIHQP +S DG
Sbjct: 76 PGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
PA F + + LR I +CY
Sbjct: 136 PAAEFHNEVKHITMLRNYITKCY 158
>ref|NP_050836.1| ATP-dependent Clp protease proteolytic subunit [Nephroselmis
olivacea] gi|18203460|sp|Q9TL09.1|CLPP_NEPOL RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|5880714|gb|AAD54807.1|AF137379_30 proteolytic subunit
2 of clp protease (chloroplast) [Nephroselmis olivacea]
Length = 208
Score = 111 bits (278), Expect = 3e-22
Identities = 59/143 (41%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W DLY+ + R R +F+GQ + +++ + GI++YLF +D S +FMYINS GG++
Sbjct: 20 WVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAED----PSIPLFMYINSPGGSVT 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
GL +FDI + + + TI +G+ AS A+LVLS G+ G R PH+R+MIHQP R G
Sbjct: 76 SGLGVFDIATVMMQDVTTICVGIAASMASLVLSGGSTGQRLALPHARMMIHQPEGGSR-G 134
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
A ++ V++LR ++V CY
Sbjct: 135 QASDVMYESSEVERLRDIVVDCY 157
>ref|NP_777437.1| ATP-dependent Clp protease proteolytic subunit [Anthoceros
formosae] gi|41688497|sp|Q85BZ1.1|CLPP_ANTFO RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27807898|dbj|BAC55373.1| ATP-dependent protease
proteolytic subunit exon3 (chloroplast) [Anthoceros
formosae] gi|27808041|dbj|BAC55470.1| ATP-dependent
protease proteolytic subunit (chloroplast) [Anthoceros
formosae]
Length = 204
Score = 111 bits (278), Expect = 3e-22
Identities = 59/143 (41%), Positives = 90/143 (62%)
Frame = +3
Query: 366 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 545
W D+Y+ + R R +FLGQ VD++I + +GI++YL +D +S+ +++YINS GGA+L
Sbjct: 20 WIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGED----ESKDMYLYINSPGGAVL 75
Query: 546 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 725
G+S++D M + +HTI +GL AS + +L+ G R PH+RIMIHQP +S DG
Sbjct: 76 AGISVYDTMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPHARIMIHQPASSYYDG 135
Query: 726 PAWLFAKDAFFVQQLRKMIVQCY 794
A +A V +LR I + Y
Sbjct: 136 QAGECIMEAEEVLKLRDCITKVY 158