BLASTX nr result

ID: Ephedra25_contig00003219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00003219
         (819 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16455.1| unknown [Picea sitchensis]                              59   2e-06

>gb|ABR16455.1| unknown [Picea sitchensis]
          Length = 560

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 17/199 (8%)
 Frame = -2

Query: 548 SQTLWNMYKESASKVFEIDFVQYLRNGTLCNGSDEYFRYKFYTAQDAFYGKAAAVASYFM 369
           ++ LW  +K+  +      FV  L  GTL   S     ++ Y AQDA++ KA A A    
Sbjct: 10  ARRLWTKFKKDTALAQYNSFVVALAAGTLNMTS-----FQQYMAQDAYFLKAFAQAYTMA 64

Query: 368 EFHEANATIKHLLQESRVSDERYVQPLLLRIQDWRAAGWTEPSPVQAAIDYVSFDLGVAM 189
           E    +   K  ++E R + E  +       +DW      E SP  A + Y  F L  A 
Sbjct: 65  EDCADDDDDKASIRELRKAAEEELNLHNSLAEDWDVEFAKECSPNMATVKYTEFLLATAA 124

Query: 188 N-----------------TTNVANILATKAICVRLFRYIANTIAREWECRIYSHPYKEWI 60
                             T   A  +     C+RL+ ++   I +  E    +HPYK+WI
Sbjct: 125 GKVEGGKGPSRSVTPFEKTKIAAYTVGAMTPCMRLYAFLGQEIVKALEPDCSNHPYKQWI 184

Query: 59  DENVSPRLDDSYLSTIEEL 3
           +   S + + S L T E L
Sbjct: 185 ETYSSAKFEASALQTEELL 203


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