BLASTX nr result

ID: Ephedra25_contig00003179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00003179
         (566 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16166.1| unknown [Picea sitchensis]                              74   3e-11
gb|AAL40352.1|AF448201_1 putative alpha-xylosidase [Pinus pinaster]    72   1e-10
gb|AFG49674.1| hypothetical protein CL996Contig1_03, partial [Pi...    59   1e-06

>gb|ABR16166.1| unknown [Picea sitchensis]
          Length = 908

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
 Frame = -3

Query: 564  MGLSAGSSTYVEFNAETDGKKVRVMSKVQHGEYALSQKWIVETXXXXXXXXXXXXXXXXX 385
            M ++ G STY++F+AE+DGKK R+MS VQ+G YALSQ W+VE                  
Sbjct: 796  MKIAEGKSTYIDFSAESDGKKARLMSHVQNGAYALSQGWVVEKLIILGLPSSHSSSQLAF 855

Query: 384  VDGETVLGDAGYT---------VEAAKGGRLMELKGLSIPVGKSFDLSLSI 259
                     + +T         ++ ++GG +M+L GL++P+G++ DLS ++
Sbjct: 856  QLDGKPFSSSSFTYSAQSHSTNIDKSQGGAIMDLNGLALPLGRNIDLSWTL 906


>gb|AAL40352.1|AF448201_1 putative alpha-xylosidase [Pinus pinaster]
          Length = 910

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 10/112 (8%)
 Frame = -3

Query: 564  MGLSAGSSTYVEFNAETDGKKVRVMSKVQHGEYALSQKWIVE-TXXXXXXXXXXXXXXXX 388
            M ++ G STYV+F+AE+DGKKVR++S+V+ G Y LSQ W+VE                  
Sbjct: 799  MKIAEGKSTYVDFSAESDGKKVRLVSQVESGSYGLSQGWVVEKLMILGLSKSHLSSQIAF 858

Query: 387  XVDGETVLGDA-GYTV--------EAAKGGRLMELKGLSIPVGKSFDLSLSI 259
             +DG+     +  Y+V        ++  GG +MEL GL++PVG++ DLS ++
Sbjct: 859  QLDGKPFTSSSFTYSVQPLSTSAEQSQGGGAIMELNGLALPVGRNIDLSWTL 910


>gb|AFG49674.1| hypothetical protein CL996Contig1_03, partial [Pinus taeda]
           gi|383137153|gb|AFG49675.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137155|gb|AFG49676.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137157|gb|AFG49677.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137159|gb|AFG49678.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137161|gb|AFG49679.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137163|gb|AFG49680.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137165|gb|AFG49681.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137167|gb|AFG49682.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137169|gb|AFG49683.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137171|gb|AFG49684.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137173|gb|AFG49685.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137175|gb|AFG49686.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137177|gb|AFG49687.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137179|gb|AFG49688.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137181|gb|AFG49689.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137183|gb|AFG49690.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
           gi|383137185|gb|AFG49691.1| hypothetical protein
           CL996Contig1_03, partial [Pinus taeda]
          Length = 72

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 25/42 (59%), Positives = 35/42 (83%)
 Frame = -3

Query: 564 MGLSAGSSTYVEFNAETDGKKVRVMSKVQHGEYALSQKWIVE 439
           M ++ G STYV+F+AE+DGKKVR++S+V+ G Y LSQ W+VE
Sbjct: 2   MKIAEGKSTYVDFSAESDGKKVRLVSQVESGSYGLSQGWVVE 43


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