BLASTX nr result
ID: Ephedra25_contig00003032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00003032
(2669 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006855976.1| hypothetical protein AMTR_s00037p00235150 [A... 101 2e-18
gb|AAB71467.1| Similar to Saccharomyces RAD16 (gb|X78993) [Arabi... 92 1e-15
ref|XP_006306775.1| hypothetical protein CARUB_v10008314mg [Caps... 83 7e-13
ref|XP_002320469.2| hypothetical protein POPTR_0014s15270g [Popu... 82 1e-12
ref|XP_002320468.2| hypothetical protein POPTR_0014s15270g [Popu... 82 1e-12
ref|XP_002321267.2| hypothetical protein POPTR_0014s15270g [Popu... 82 1e-12
ref|XP_006418060.1| hypothetical protein EUTSA_v10006803mg [Eutr... 82 2e-12
ref|XP_004248914.1| PREDICTED: DNA repair protein RAD16-like [So... 82 2e-12
ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricin... 82 2e-12
ref|XP_006657752.1| PREDICTED: ATP-dependent helicase rhp16-like... 81 2e-12
ref|XP_006469670.1| PREDICTED: ATP-dependent helicase rhp16-like... 81 2e-12
ref|XP_006469668.1| PREDICTED: ATP-dependent helicase rhp16-like... 81 2e-12
ref|XP_006447583.1| hypothetical protein CICLE_v10014220mg [Citr... 81 2e-12
ref|XP_006447582.1| hypothetical protein CICLE_v10014220mg [Citr... 81 2e-12
ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabid... 80 4e-12
ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [So... 80 5e-12
ref|XP_004240150.1| PREDICTED: ATP-dependent helicase rhp16-like... 80 5e-12
ref|XP_002892268.1| SNF2 domain-containing protein [Arabidopsis ... 80 5e-12
ref|XP_004506273.1| PREDICTED: ATP-dependent helicase rhp16-like... 79 1e-11
ref|XP_004506272.1| PREDICTED: ATP-dependent helicase rhp16-like... 79 1e-11
>ref|XP_006855976.1| hypothetical protein AMTR_s00037p00235150 [Amborella trichopoda]
gi|548859797|gb|ERN17443.1| hypothetical protein
AMTR_s00037p00235150 [Amborella trichopoda]
Length = 933
Score = 101 bits (251), Expect = 2e-18
Identities = 58/157 (36%), Positives = 69/157 (43%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAVFAL+SSY+WALS PLQNRVGELYSL +RF
Sbjct: 472 KAVFALESSYKWALSGTPLQNRVGELYSL----------------------------IRF 503
Query: 2151 LQIFPYSYYFCKKCDCQSLDYRLFFFYFSXXXXXXXXXXXXXXXXXENCFFILQSVYYIP 2330
LQI PYSYY+CK CDC+SLD+R
Sbjct: 504 LQIEPYSYYYCKDCDCKSLDHR-------------------------------------- 525
Query: 2331 NVLTILVIFLDYSFGKNYRECDHCGHSPLSHFCWWNK 2441
+ ++ + C +CGHSPL HFCWWNK
Sbjct: 526 -------------YDEDGKRCQNCGHSPLKHFCWWNK 549
>gb|AAB71467.1| Similar to Saccharomyces RAD16 (gb|X78993) [Arabidopsis thaliana]
Length = 822
Score = 92.0 bits (227), Expect = 1e-15
Identities = 56/157 (35%), Positives = 71/157 (45%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
+AVFAL+++YRWALS PLQNRVGELYSL +RF
Sbjct: 374 RAVFALEATYRWALSGTPLQNRVGELYSL----------------------------IRF 405
Query: 2151 LQIFPYSYYFCKKCDCQSLDYRLFFFYFSXXXXXXXXXXXXXXXXXENCFFILQSVYYIP 2330
LQI PYSYYFCK CDC+ LDY F ++ +
Sbjct: 406 LQIRPYSYYFCKDCDCRILDY----------------------------FCLIVNNNLCG 437
Query: 2331 NVLTILVIFLDYSFGKNYRECDHCGHSPLSHFCWWNK 2441
+V + V ++ C HC H+ + HFCWWNK
Sbjct: 438 SVFSGGVC-------SAHQSCPHCPHNAVRHFCWWNK 467
>ref|XP_006306775.1| hypothetical protein CARUB_v10008314mg [Capsella rubella]
gi|482575486|gb|EOA39673.1| hypothetical protein
CARUB_v10008314mg [Capsella rubella]
Length = 831
Score = 82.8 bits (203), Expect = 7e-13
Identities = 43/81 (53%), Positives = 48/81 (59%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAVFAL+++YRWALS PLQNRVGELYSL +RF
Sbjct: 372 KAVFALEATYRWALSGTPLQNRVGELYSL----------------------------IRF 403
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 404 LQILPYSYYFCKDCDCRILDY 424
>ref|XP_002320469.2| hypothetical protein POPTR_0014s15270g [Populus trichocarpa]
gi|550324256|gb|EEE98784.2| hypothetical protein
POPTR_0014s15270g [Populus trichocarpa]
Length = 869
Score = 82.0 bits (201), Expect = 1e-12
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAVFAL SSY+WALS PLQNRVGELYSL VRF
Sbjct: 409 KAVFALDSSYKWALSGTPLQNRVGELYSL----------------------------VRF 440
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYY CK CDC++LDY
Sbjct: 441 LQIVPYSYYLCKDCDCRTLDY 461
>ref|XP_002320468.2| hypothetical protein POPTR_0014s15270g [Populus trichocarpa]
gi|550324255|gb|EEE98783.2| hypothetical protein
POPTR_0014s15270g [Populus trichocarpa]
Length = 862
Score = 82.0 bits (201), Expect = 1e-12
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAVFAL SSY+WALS PLQNRVGELYSL VRF
Sbjct: 409 KAVFALDSSYKWALSGTPLQNRVGELYSL----------------------------VRF 440
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYY CK CDC++LDY
Sbjct: 441 LQIVPYSYYLCKDCDCRTLDY 461
>ref|XP_002321267.2| hypothetical protein POPTR_0014s15270g [Populus trichocarpa]
gi|550324254|gb|EEE99582.2| hypothetical protein
POPTR_0014s15270g [Populus trichocarpa]
Length = 826
Score = 82.0 bits (201), Expect = 1e-12
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAVFAL SSY+WALS PLQNRVGELYSL VRF
Sbjct: 409 KAVFALDSSYKWALSGTPLQNRVGELYSL----------------------------VRF 440
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYY CK CDC++LDY
Sbjct: 441 LQIVPYSYYLCKDCDCRTLDY 461
>ref|XP_006418060.1| hypothetical protein EUTSA_v10006803mg [Eutrema salsugineum]
gi|557095831|gb|ESQ36413.1| hypothetical protein
EUTSA_v10006803mg [Eutrema salsugineum]
Length = 826
Score = 81.6 bits (200), Expect = 2e-12
Identities = 43/81 (53%), Positives = 48/81 (59%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAVFAL+++YRWALS PLQNRVGELYSL +RF
Sbjct: 366 KAVFALKATYRWALSGTPLQNRVGELYSL----------------------------IRF 397
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 398 LQICPYSYYFCKDCDCKILDY 418
>ref|XP_004248914.1| PREDICTED: DNA repair protein RAD16-like [Solanum lycopersicum]
Length = 889
Score = 81.6 bits (200), Expect = 2e-12
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KA+ AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 431 KAILALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 462
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 463 LQILPYSYYFCKDCDCRVLDY 483
>ref|XP_002524826.1| DNA repair helicase rad5,16, putative [Ricinus communis]
gi|223535886|gb|EEF37546.1| DNA repair helicase rad5,16,
putative [Ricinus communis]
Length = 874
Score = 81.6 bits (200), Expect = 2e-12
Identities = 43/82 (52%), Positives = 48/82 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KA+FAL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 415 KAIFALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 446
Query: 2151 LQIFPYSYYFCKKCDCQSLDYR 2216
LQI PYS+Y CK CDC+ LDYR
Sbjct: 447 LQIVPYSFYLCKDCDCRILDYR 468
>ref|XP_006657752.1| PREDICTED: ATP-dependent helicase rhp16-like [Oryza brachyantha]
Length = 568
Score = 81.3 bits (199), Expect = 2e-12
Identities = 55/157 (35%), Positives = 62/157 (39%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
+AVFAL+S Y+WALS PLQNRVGELYSL VRF
Sbjct: 110 RAVFALESEYKWALSGTPLQNRVGELYSL----------------------------VRF 141
Query: 2151 LQIFPYSYYFCKKCDCQSLDYRLFFFYFSXXXXXXXXXXXXXXXXXENCFFILQSVYYIP 2330
LQIFPYS YFCK+C+C+ LD L
Sbjct: 142 LQIFPYSNYFCKECNCEILDTLL------------------------------------- 164
Query: 2331 NVLTILVIFLDYSFGKNYRECDHCGHSPLSHFCWWNK 2441
K EC GHS + HFCWWNK
Sbjct: 165 ---------------KKQCEC---GHSSVRHFCWWNK 183
>ref|XP_006469670.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X3 [Citrus
sinensis]
Length = 846
Score = 81.3 bits (199), Expect = 2e-12
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAV AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 387 KAVLALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 418
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 419 LQITPYSYYFCKDCDCKVLDY 439
>ref|XP_006469668.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Citrus
sinensis]
Length = 885
Score = 81.3 bits (199), Expect = 2e-12
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAV AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 426 KAVLALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 457
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 458 LQITPYSYYFCKDCDCKVLDY 478
>ref|XP_006447583.1| hypothetical protein CICLE_v10014220mg [Citrus clementina]
gi|557550194|gb|ESR60823.1| hypothetical protein
CICLE_v10014220mg [Citrus clementina]
Length = 723
Score = 81.3 bits (199), Expect = 2e-12
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAV AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 264 KAVLALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 295
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 296 LQITPYSYYFCKDCDCKVLDY 316
>ref|XP_006447582.1| hypothetical protein CICLE_v10014220mg [Citrus clementina]
gi|568830792|ref|XP_006469669.1| PREDICTED: ATP-dependent
helicase rhp16-like isoform X2 [Citrus sinensis]
gi|557550193|gb|ESR60822.1| hypothetical protein
CICLE_v10014220mg [Citrus clementina]
Length = 883
Score = 81.3 bits (199), Expect = 2e-12
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAV AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 424 KAVLALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 455
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 456 LQITPYSYYFCKDCDCKVLDY 476
>ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
gi|332189671|gb|AEE27792.1| Helicase protein with
RING/U-box domain [Arabidopsis thaliana]
Length = 833
Score = 80.5 bits (197), Expect = 4e-12
Identities = 42/81 (51%), Positives = 48/81 (59%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
+AVFAL+++YRWALS PLQNRVGELYSL +RF
Sbjct: 374 RAVFALEATYRWALSGTPLQNRVGELYSL----------------------------IRF 405
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 406 LQIRPYSYYFCKDCDCRILDY 426
>ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [Solanum tuberosum]
Length = 892
Score = 80.1 bits (196), Expect = 5e-12
Identities = 42/81 (51%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
+A+ AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 434 RAILALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 465
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 466 LQIVPYSYYFCKDCDCRVLDY 486
>ref|XP_004240150.1| PREDICTED: ATP-dependent helicase rhp16-like [Solanum lycopersicum]
Length = 889
Score = 80.1 bits (196), Expect = 5e-12
Identities = 42/81 (51%), Positives = 47/81 (58%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
+A+ AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 431 RAILALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 462
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 463 LQIVPYSYYFCKDCDCRVLDY 483
>ref|XP_002892268.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297338110|gb|EFH68527.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 843
Score = 80.1 bits (196), Expect = 5e-12
Identities = 42/81 (51%), Positives = 48/81 (59%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
+AVFAL+++YRWALS PLQNRVGELYSL +RF
Sbjct: 384 RAVFALEATYRWALSGTPLQNRVGELYSL----------------------------IRF 415
Query: 2151 LQIFPYSYYFCKKCDCQSLDY 2213
LQI PYSYYFCK CDC+ LDY
Sbjct: 416 LQIRPYSYYFCKGCDCRILDY 436
>ref|XP_004506273.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X2 [Cicer
arietinum]
Length = 888
Score = 79.0 bits (193), Expect = 1e-11
Identities = 54/157 (34%), Positives = 59/157 (37%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAV AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 429 KAVLALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 460
Query: 2151 LQIFPYSYYFCKKCDCQSLDYRLFFFYFSXXXXXXXXXXXXXXXXXENCFFILQSVYYIP 2330
LQI PYSYY CK CDC+ LD
Sbjct: 461 LQIVPYSYYLCKDCDCRILD---------------------------------------- 480
Query: 2331 NVLTILVIFLDYSFGKNYRECDHCGHSPLSHFCWWNK 2441
+S K C HS + HFCWWNK
Sbjct: 481 -----------HSSSKQCSNC---SHSSVRHFCWWNK 503
>ref|XP_004506272.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer
arietinum]
Length = 888
Score = 79.0 bits (193), Expect = 1e-11
Identities = 54/157 (34%), Positives = 59/157 (37%)
Frame = +3
Query: 1971 KAVFALQSSYRWALSVAPLQNRVGELYSLVGLYK*RVKILHFE*QLA*NFLMRFVLQVRF 2150
KAV AL+SSY+WALS PLQNRVGELYSL VRF
Sbjct: 429 KAVLALESSYKWALSGTPLQNRVGELYSL----------------------------VRF 460
Query: 2151 LQIFPYSYYFCKKCDCQSLDYRLFFFYFSXXXXXXXXXXXXXXXXXENCFFILQSVYYIP 2330
LQI PYSYY CK CDC+ LD
Sbjct: 461 LQIVPYSYYLCKDCDCRILD---------------------------------------- 480
Query: 2331 NVLTILVIFLDYSFGKNYRECDHCGHSPLSHFCWWNK 2441
+S K C HS + HFCWWNK
Sbjct: 481 -----------HSSSKQCSNC---SHSSVRHFCWWNK 503