BLASTX nr result
ID: Ephedra25_contig00002974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00002974
(650 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis] 86 9e-15
ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containi... 86 1e-14
ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Popu... 84 4e-14
gb|EOX97788.1| Pentatricopeptide repeat-containing protein, puta... 84 5e-14
ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus pe... 81 2e-13
ref|XP_002534048.1| pentatricopeptide repeat-containing protein,... 81 3e-13
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi... 79 1e-12
emb|CBI37948.3| unnamed protein product [Vitis vinifera] 79 1e-12
emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera] 79 2e-12
ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containi... 77 6e-12
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi... 77 6e-12
gb|ESW03718.1| hypothetical protein PHAVU_011G0363000g, partial ... 77 6e-12
ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containi... 77 6e-12
ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_003607170.1| Pentatricopeptide repeat-containing protein ... 74 3e-11
ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containi... 74 5e-11
ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citr... 73 6e-11
>gb|EXB36850.1| hypothetical protein L484_003235 [Morus notabilis]
Length = 1125
Score = 85.9 bits (211), Expect = 9e-15
Identities = 45/89 (50%), Positives = 59/89 (66%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I+ +GR G+AVA+LLRRL LPY G E+HGKIRI G L++W PK +P F R
Sbjct: 1040 EKTINLAGRIGRAVAALLRRLGLPYQGHESHGKIRIYGLTLKRWFKPKLASP---FSGRP 1096
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
+ + LG+ I HQQ+ IRTG+ S+D
Sbjct: 1097 EEINLSQFRLGKEIAHQQRNIRTGNLSLD 1125
>ref|XP_004292148.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1028
Score = 85.5 bits (210), Expect = 1e-14
Identities = 44/88 (50%), Positives = 58/88 (65%)
Frame = -3
Query: 645 KLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARAL 466
K I+ SGR GQ+VASLLRRL + Y G E+ GKIRISG L++W PK +P F +
Sbjct: 944 KTINLSGRVGQSVASLLRRLGIDYQGNESRGKIRISGLTLKRWFQPKLASP---FTGKLA 1000
Query: 465 TSSNTDLHLGRSIQHQQQIIRTGDFSID 382
++ L LG+ I HQQ+ IRTG+ S+D
Sbjct: 1001 ELGSSQLRLGKGIMHQQRNIRTGNLSLD 1028
>ref|XP_002306163.2| hypothetical protein POPTR_0004s17400g [Populus trichocarpa]
gi|550341229|gb|EEE86674.2| hypothetical protein
POPTR_0004s17400g [Populus trichocarpa]
Length = 1104
Score = 84.0 bits (206), Expect = 4e-14
Identities = 46/89 (51%), Positives = 60/89 (67%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I+ +GR +AVASLLRRL LPY G E++GKIRI+G LR+WL PK +P F +
Sbjct: 1019 EKTINVAGRISRAVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLDSP---FSGKP 1075
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
S + LG+ I QQ+ IRTGDFS++
Sbjct: 1076 GEWSTSLSRLGKGISFQQRNIRTGDFSLE 1104
>gb|EOX97788.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 1110
Score = 83.6 bits (205), Expect = 5e-14
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I+ +GR GQA+A+LLRR+ LPY G E+ GKIRI+G L++W PK +P F +
Sbjct: 1025 EKSINLAGRIGQAIAALLRRIGLPYQGNESFGKIRINGLALKRWFQPKLASP---FTGKP 1081
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
+ + + LG+ I HQQ+ IRTG+ S+D
Sbjct: 1082 GEWNASQMRLGKGISHQQRNIRTGNLSLD 1110
>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 1109
Score = 82.4 bits (202), Expect = 1e-13
Identities = 45/89 (50%), Positives = 58/89 (65%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I +GR +AVA+LLRRL LPY G E+ GKIRI+G I+++W PK +P F +
Sbjct: 1024 EKTIKIAGRINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESP-FSWEQTD 1082
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
+ S T L G I HQQ+ IRTGD S+D
Sbjct: 1083 FSFSQTRLRKG--ISHQQRTIRTGDLSLD 1109
>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1140
Score = 82.4 bits (202), Expect = 1e-13
Identities = 45/89 (50%), Positives = 58/89 (65%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I +GR +AVA+LLRRL LPY G E+ GKIRI+G I+++W PK +P F +
Sbjct: 1055 EKTIKIAGRINRAVAALLRRLGLPYQGNESFGKIRINGVIVKRWFQPKLESP-FSWEQTD 1113
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
+ S T L G I HQQ+ IRTGD S+D
Sbjct: 1114 FSFSQTRLRKG--ISHQQRTIRTGDLSLD 1140
>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Solanum lycopersicum]
Length = 1182
Score = 82.4 bits (202), Expect = 1e-13
Identities = 44/89 (49%), Positives = 58/89 (65%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
+K I +GR +AVA+LLRRL LPY G E+ GKIRI+G I+++W PK +P F +
Sbjct: 1097 QKTIKIAGRINRAVAALLRRLRLPYQGNESFGKIRINGVIMKRWFQPKLESP-FSWEQTG 1155
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
+ S T L G I HQQ+ IRTGD S+D
Sbjct: 1156 FSFSQTRLRKG--ISHQQRTIRTGDLSLD 1182
>gb|EMJ00876.1| hypothetical protein PRUPE_ppa000631mg [Prunus persica]
Length = 1060
Score = 81.3 bits (199), Expect = 2e-13
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = -3
Query: 645 KLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARAL 466
K I+ +GR GQ+VA+LLRRL +PY G E+ GKI+ISG +++WL PK F +
Sbjct: 977 KTINIAGRVGQSVAALLRRLGIPYQGNESRGKIKISGLAMKRWLQPK----LASFTGKPG 1032
Query: 465 TSSNTDLHLGRSIQHQQQIIRTGDFSID 382
++ L LG+ I HQQ+ IRTG+ S+D
Sbjct: 1033 EFGSSQLQLGKGITHQQRNIRTGNLSLD 1060
>ref|XP_002534048.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525928|gb|EEF28334.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1129
Score = 80.9 bits (198), Expect = 3e-13
Identities = 45/89 (50%), Positives = 61/89 (68%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I+ +GR Q VASLLRRL LPY G E++GKIRI+G LR+WL PK +P F +
Sbjct: 1044 EKTINLAGRISQDVASLLRRLGLPYQGNESYGKIRINGISLRRWLQPKLASP-FSGKPEE 1102
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L+ S + +G+ I HQQ+ IRTG+ S++
Sbjct: 1103 LSFSLS--RIGKGITHQQRNIRTGNLSLN 1129
>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Vitis vinifera]
Length = 1115
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I+ +GR QAVAS+LRRL LPY G E+ GKIRI+G R+W PK P F +
Sbjct: 1030 EKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGP-FSGKVDE 1088
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L+SS + LG I QQ+ IRTG+ S+D
Sbjct: 1089 LSSSQS--RLGTGISLQQRKIRTGNLSLD 1115
>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I+ +GR QAVAS+LRRL LPY G E+ GKIRI+G R+W PK P F +
Sbjct: 1465 EKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLATRRWFQPKLAGP-FSGKVDE 1523
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L+SS + LG I QQ+ IRTG+ S+D
Sbjct: 1524 LSSSQS--RLGTGISLQQRKIRTGNLSLD 1550
>emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]
Length = 1206
Score = 78.6 bits (192), Expect = 2e-12
Identities = 45/89 (50%), Positives = 57/89 (64%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I+ +GR QAVAS+LRRL LPY G E+ GKIRI+G R+W PK P F +
Sbjct: 1121 EKAINLAGRISQAVASMLRRLGLPYQGNESRGKIRINGLAXRRWXQPKLAGP-FSGKVDE 1179
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L+SS + LG I QQ+ IRTG+ S+D
Sbjct: 1180 LSSSQS--RLGTGISLQQRKIRTGNLSLD 1206
>ref|XP_006494589.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 713
Score = 76.6 bits (187), Expect = 6e-12
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I + RT QA+A+LLRRL LPY G ++GKIRI+G L++W PK +P F +
Sbjct: 630 EKTIDIAERTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASP-FSGKPGE 688
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L+S L LG+ I HQQ+ IRTG+ S++
Sbjct: 689 LSS----LQLGKFITHQQRNIRTGNLSLE 713
>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 1072
Score = 76.6 bits (187), Expect = 6e-12
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I + RT QA+A+LLRRL LPY G ++GKIRI+G L++W PK +P F +
Sbjct: 989 EKTIDIAERTTQAIAALLRRLGLPYQGNGSYGKIRINGLALKRWFQPKLASP-FSGKPGE 1047
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L+S L LG+ I HQQ+ IRTG+ S++
Sbjct: 1048 LSS----LQLGKFITHQQRNIRTGNLSLE 1072
>gb|ESW03718.1| hypothetical protein PHAVU_011G0363000g, partial [Phaseolus
vulgaris]
Length = 108
Score = 76.6 bits (187), Expect = 6e-12
Identities = 38/89 (42%), Positives = 59/89 (66%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK+I+ +GR G+A+ +LLRRL +P+ G E++GK+RI+G L+ W PK +P F +
Sbjct: 23 EKIINLAGRMGKAIGALLRRLQIPHQGNESYGKLRINGVALKIWFQPKLASP---FSGKP 79
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
S++ LG+ I HQQ+ IR G+ S+D
Sbjct: 80 GDWSSSMSRLGKGISHQQRNIRIGNLSLD 108
>ref|XP_004147063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cucumis sativus]
Length = 1108
Score = 76.6 bits (187), Expect = 6e-12
Identities = 43/89 (48%), Positives = 54/89 (60%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
E+ I+ SGR GQAVA+LLRRL LPY G E+ GKIRI+G LR+WL PK S +
Sbjct: 1023 ERTINLSGRVGQAVAALLRRLGLPYQGNESSGKIRINGLALRRWLQPK---LSDSLSGKP 1079
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L + I HQQ+ IR G+ S+D
Sbjct: 1080 GEFGTFQSRLRKGISHQQRDIRIGNLSLD 1108
>ref|XP_004505826.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Cicer arietinum]
Length = 1113
Score = 75.5 bits (184), Expect = 1e-11
Identities = 40/89 (44%), Positives = 59/89 (66%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK+I + R GQAVA+L RRL++PY G E++GK+RI+ L +W PK +P F
Sbjct: 1028 EKIIILAERAGQAVAALFRRLHIPYQGNESNGKLRINSLGLIKWFQPKLASP---FSGLP 1084
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
S+++ LG++I HQQ+ IRTG+ S+D
Sbjct: 1085 GDWSSSESRLGKNISHQQRNIRTGNLSLD 1113
>ref|XP_003607170.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508225|gb|AES89367.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1173
Score = 74.3 bits (181), Expect = 3e-11
Identities = 41/89 (46%), Positives = 59/89 (66%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I + R GQAVA+L RRL++PY G E++GK+RI+ L +W PK +P F+
Sbjct: 1088 EKTIILAERGGQAVAALFRRLHIPYQGSESNGKLRINSLGLIKWYQPKLASPFGGFQG-- 1145
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
S+T L LG++I +QQ+ IRTG+ S+D
Sbjct: 1146 -DWSSTQLRLGKNISNQQRNIRTGNLSLD 1173
>ref|XP_006587670.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
chloroplastic-like [Glycine max]
Length = 1150
Score = 73.6 bits (179), Expect = 5e-11
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 8/97 (8%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPK---PY-----AP 493
+K I+ GR GQAV +LLRRL +P+ G E++GK+RI G L++W PK P+ +P
Sbjct: 1056 KKNINLGGRAGQAVGALLRRLQIPHQGSESNGKLRIGGLALKKWFQPKLAYPFSVNMGSP 1115
Query: 492 SFKFRARALTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
+F + SS + LG+SI +QQ+ IRTG+ S+D
Sbjct: 1116 TFSGKPGDWNSSLS--RLGKSISNQQRNIRTGNLSLD 1150
>ref|XP_006423563.1| hypothetical protein CICLE_v10027915mg [Citrus clementina]
gi|557525497|gb|ESR36803.1| hypothetical protein
CICLE_v10027915mg [Citrus clementina]
Length = 713
Score = 73.2 bits (178), Expect = 6e-11
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = -3
Query: 648 EKLISASGRTGQAVASLLRRLNLPYFGKEAHGKIRISGTILRQWLSPKPYAPSFKFRARA 469
EK I + RT QA+A+LLRRL LP G ++GKIRI+G L++W PK +P F +
Sbjct: 630 EKTIDIAERTTQAIAALLRRLGLPNQGNGSYGKIRINGLALKRWFQPKLASP-FSGKPGE 688
Query: 468 LTSSNTDLHLGRSIQHQQQIIRTGDFSID 382
L+S L LG+ I HQQ+ IRTG+ S++
Sbjct: 689 LSS----LQLGKFITHQQRNIRTGNLSLE 713