BLASTX nr result
ID: Ephedra25_contig00002892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00002892
(521 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK26380.1| unknown [Picea sitchensis] 232 4e-59
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 216 3e-54
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 214 7e-54
gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao] 210 1e-52
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 209 2e-52
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 209 2e-52
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 208 5e-52
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I... 208 7e-52
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 207 9e-52
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 206 2e-51
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 205 6e-51
ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|2... 205 6e-51
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I... 205 6e-51
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 204 8e-51
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr... 204 8e-51
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps... 204 8e-51
ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutr... 204 1e-50
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 203 2e-50
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I... 202 3e-50
ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrat... 202 3e-50
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 232 bits (591), Expect = 4e-59
Identities = 114/145 (78%), Positives = 127/145 (87%), Gaps = 1/145 (0%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
M E++FEDIF ++RIDP+GKKFDKVSRIEARSEQFDMYMLLDVNI+VYPVSVGEKF VAL
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 333 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLM 157
+ TLNLDGTPD GYFIQ GRK+LADKYEYVM GK+Y + E GSG + KVE+ S+GGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120
Query: 156 LLKGDPGNLSKFELDQRLFLLMRKV 82
LLKGDP N FELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 216 bits (549), Expect = 3e-54
Identities = 102/142 (71%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
++FEDIFV+ ++DP+GKKFDKVSRIEA S+ DM+M LDVN E+YP++VG+KFT+AL+ T
Sbjct: 5 VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64
Query: 324 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLK 148
LNLDGTPDTGY+ QG RKTLADKYEY+MNGK+YKI E GSG + K E+ VSYGGLLMLL+
Sbjct: 65 LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLR 124
Query: 147 GDPGNLSKFELDQRLFLLMRKV 82
GDP ++S FELDQRLFLLMRK+
Sbjct: 125 GDPSHVSHFELDQRLFLLMRKL 146
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
Length = 146
Score = 214 bits (546), Expect = 7e-54
Identities = 103/142 (72%), Positives = 124/142 (87%), Gaps = 1/142 (0%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
++FEDIFV+ +IDP+GKKFDKVSRIEA S+ DMYMLLDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHT 64
Query: 324 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLK 148
LNLDGTPDTGY+ G RKTLADKYEY+M+GK++KI + GSG S K E+YVSYGGLLM+LK
Sbjct: 65 LNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLK 124
Query: 147 GDPGNLSKFELDQRLFLLMRKV 82
GDP +S FELDQRLFLLMRK+
Sbjct: 125 GDPSYVSHFELDQRLFLLMRKL 146
>gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
Length = 145
Score = 210 bits (535), Expect = 1e-52
Identities = 97/141 (68%), Positives = 123/141 (87%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
I FEDIFV+ ++DP+GKKFDKV+RIEARS+ DM+M LDVN E+YP+ VG+KFT+AL+ T
Sbjct: 5 IFFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHT 64
Query: 324 LNLDGTPDTGYFIQGRKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLKG 145
LNLDGTPDTGY+ GRK+LADKYEYVM+GK+YK+ + GSG K E+YVSYGGLLM+L+G
Sbjct: 65 LNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRG 124
Query: 144 DPGNLSKFELDQRLFLLMRKV 82
+ ++S+FELDQRLFLLMRK+
Sbjct: 125 EASHVSQFELDQRLFLLMRKL 145
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 209 bits (533), Expect = 2e-52
Identities = 102/147 (69%), Positives = 126/147 (85%), Gaps = 2/147 (1%)
Frame = -3
Query: 516 KMAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVA 337
KM E +FEDIF ++R+DP+GKKFD+VSRIEARSEQFDMYM LDV EVYP+ G++FT+
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309
Query: 336 LSATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDE-SGSGVSAKVELYVSYGGL 163
L+ TLNLDGTPDTG++ Q GRKTLADK++YVM+GK+YKI E S SG + KVE+Y S+GGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369
Query: 162 LMLLKGDPGNLSKFELDQRLFLLMRKV 82
LM+LKGDP + + FELDQRLFLL+RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 209 bits (533), Expect = 2e-52
Identities = 102/147 (69%), Positives = 126/147 (85%), Gaps = 2/147 (1%)
Frame = -3
Query: 516 KMAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVA 337
KM E +FEDIF ++R+DP+GKKFD+VSRIEARSEQFDMYM LDV EVYP+ G++FT+
Sbjct: 45 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104
Query: 336 LSATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDE-SGSGVSAKVELYVSYGGL 163
L+ TLNLDGTPDTG++ Q GRKTLADK++YVM+GK+YKI E S SG + KVE+Y S+GGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164
Query: 162 LMLLKGDPGNLSKFELDQRLFLLMRKV 82
LM+LKGDP + + FELDQRLFLL+RKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 208 bits (530), Expect = 5e-52
Identities = 103/146 (70%), Positives = 123/146 (84%), Gaps = 2/146 (1%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
M E +FEDIF ++R+DP+GKKFD+VSRIEARSEQFDMYM LDV EVYP+ G+KFT+ L
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 333 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVSA-KVELYVSYGGLL 160
+ TLNLDGTPD G++ Q GRKTLADKY+YVM+GK+YKI E GSG A KVE+Y S+GGLL
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120
Query: 159 MLLKGDPGNLSKFELDQRLFLLMRKV 82
M+LKGDP + FELDQRLFLL+RKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146
>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 146
Score = 208 bits (529), Expect = 7e-52
Identities = 105/146 (71%), Positives = 123/146 (84%), Gaps = 2/146 (1%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
MAE +FEDIFV++RIDP+GKKFD+V+RIEARSEQF MYM LDV VYP+ G+KFT+ L
Sbjct: 1 MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60
Query: 333 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDE-SGSGVSAKVELYVSYGGLL 160
+ TLNLDGTPDTGY+ Q GRKTLADKY+YVM+GK+YKI E S G +AKVE Y S+GGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120
Query: 159 MLLKGDPGNLSKFELDQRLFLLMRKV 82
MLLKGDP + + ELDQRLFLLMRKV
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 207 bits (528), Expect = 9e-52
Identities = 101/145 (69%), Positives = 119/145 (82%), Gaps = 1/145 (0%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
M+E +FED F++SR+DP+GKKFDKVSR+EARSEQ MYM LDV +VYP+ GEKF + L
Sbjct: 1 MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60
Query: 333 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLM 157
+ TLNLDGTPDTGY+ Q GRKTLAD YEYVM GK+YKI E S +AKVE+Y S+GGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 156 LLKGDPGNLSKFELDQRLFLLMRKV 82
LL+GDP + FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 206 bits (525), Expect = 2e-51
Identities = 102/147 (69%), Positives = 125/147 (85%), Gaps = 3/147 (2%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
MAE +FEDIF ++R+DP+GKKFD+VSRIEAR+EQ ++YM LDV +VYP+ G+KFT+ L
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60
Query: 333 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKI--DESGSGVSAKVELYVSYGGL 163
TLNLDGTPDTG+F Q GRKTLADKYEYVM+GK+YKI D+ SG +AKVE+Y S+GGL
Sbjct: 61 VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120
Query: 162 LMLLKGDPGNLSKFELDQRLFLLMRKV 82
LM+LKGDP + + FELDQRLFLLMRKV
Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 205 bits (521), Expect = 6e-51
Identities = 96/145 (66%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
M E +FEDIF +++ DP+GKKFD+V+RIEARSEQFDM+MLLDVN E+YP+ V +KF + L
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 333 SATLNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLM 157
++TLNLDGTPDTGYFIQG +K+LADK+EYVM+GK+Y+I E GSG K +++VS+GGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 156 LLKGDPGNLSKFELDQRLFLLMRKV 82
L+GDP +KFELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana]
gi|297817262|ref|XP_002876514.1| hypothetical protein
ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata]
gi|565468254|ref|XP_006292007.1| hypothetical protein
CARUB_v10018195mg [Capsella rubella]
gi|75335784|sp|Q9M1A8.1|RPB8B_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
8B; AltName: Full=RNA polymerase Rpb8
gi|6996296|emb|CAB75457.1| putative protein [Arabidopsis
thaliana] gi|21554131|gb|AAM63211.1| RNA polymerase II
subunit, putative [Arabidopsis thaliana]
gi|26453032|dbj|BAC43592.1| unknown protein [Arabidopsis
thaliana] gi|30793811|gb|AAP40358.1| unknown protein
[Arabidopsis thaliana] gi|297322352|gb|EFH52773.1|
hypothetical protein ARALYDRAFT_907465 [Arabidopsis
lyrata subsp. lyrata] gi|332646423|gb|AEE79944.1| RNA
polymerase Rpb8 [Arabidopsis thaliana]
gi|482560714|gb|EOA24905.1| hypothetical protein
CARUB_v10018195mg [Capsella rubella]
Length = 146
Score = 205 bits (521), Expect = 6e-51
Identities = 99/142 (69%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
IMFEDIFV+ ++DP+GKKFDKV+R+EARS +M+M LDVN EVYP++VG+KFT+A++ T
Sbjct: 6 IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPT 65
Query: 324 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLK 148
LNLDGTPDTGYF G +KTLADKYEY+M+GK+YKI E G + K ELYVS+GGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLQ 124
Query: 147 GDPGNLSKFELDQRLFLLMRKV 82
GDP ++S FELDQRLFLLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146
>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 144
Score = 205 bits (521), Expect = 6e-51
Identities = 105/146 (71%), Positives = 124/146 (84%), Gaps = 2/146 (1%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
MAE +FEDIFV+SRIDP+GKKFD+V+RIEARSEQ MYM LDV +VYP+ G+KFT+ L
Sbjct: 1 MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVL 58
Query: 333 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSG-VSAKVELYVSYGGLL 160
+ TLNLDGTPDTGY+ Q GRKTLADKY+YVM+GK+YKI E SG +AKVE+Y S+GGLL
Sbjct: 59 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLL 118
Query: 159 MLLKGDPGNLSKFELDQRLFLLMRKV 82
MLLKGDP + + ELDQRLFLLMRKV
Sbjct: 119 MLLKGDPSSAANLELDQRLFLLMRKV 144
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 204 bits (520), Expect = 8e-51
Identities = 95/145 (65%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
M E +FEDIF +++ DP+GKKFD+V+RIEARSEQFDM+MLLD+N E+YP+ V +KF + L
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 333 SATLNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLM 157
++TLNLDGTPDTGYFIQG +K+LADK+EYVM+GK+Y+I E GSG K +++VS+GGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 156 LLKGDPGNLSKFELDQRLFLLMRKV 82
L+GDP +KFELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
gi|557098120|gb|ESQ38556.1| hypothetical protein
EUTSA_v10029046mg [Eutrema salsugineum]
Length = 146
Score = 204 bits (520), Expect = 8e-51
Identities = 99/142 (69%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
IMFEDIFV+ ++DP+GKKFDKV+R+EARS +M+M LDVN EVYP++VG+KFT+A++ T
Sbjct: 6 IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAMAPT 65
Query: 324 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLK 148
LNLDGTPDTGYF G +KTLADKYEY+M+GK+YKI E G + K ELYVS+GGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQ 124
Query: 147 GDPGNLSKFELDQRLFLLMRKV 82
GDP ++S FELDQRLFLLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146
>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
gi|482574468|gb|EOA38655.1| hypothetical protein
CARUB_v10010575mg [Capsella rubella]
Length = 146
Score = 204 bits (520), Expect = 8e-51
Identities = 99/142 (69%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
IMFEDIFV++++DP+GKKFDKV+R+EA S +M+M LDVN EVYP++VG+KFT+A++ T
Sbjct: 6 IMFEDIFVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPT 65
Query: 324 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLK 148
LNLDGTPDTGYF G +KTLADKYEY+M+GK+YKI E G + K ELYVS+GGLLMLLK
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLK 124
Query: 147 GDPGNLSKFELDQRLFLLMRKV 82
GDP ++S FELDQRLFLLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146
>ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum]
gi|567183404|ref|XP_006402675.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
gi|557103773|gb|ESQ44127.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
gi|557103774|gb|ESQ44128.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
Length = 146
Score = 204 bits (518), Expect = 1e-50
Identities = 99/142 (69%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
I+FEDIFV+ ++DP+GKKFDKV+R+EARS +M+M LDVN EVYP++VG+KFT+A++ T
Sbjct: 6 ILFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPT 65
Query: 324 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLK 148
LNLDGTPDTGYF G +KTLADKYEYVM+GK+YKI E G + K ELYVS+GGLLMLL+
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYVMHGKLYKITER-DGKTPKAELYVSFGGLLMLLQ 124
Query: 147 GDPGNLSKFELDQRLFLLMRKV 82
GDP ++S FELDQRLFLLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146
>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
gi|241917379|gb|EER90523.1| hypothetical protein
SORBIDRAFT_01g001420 [Sorghum bicolor]
Length = 145
Score = 203 bits (516), Expect = 2e-50
Identities = 99/145 (68%), Positives = 119/145 (82%), Gaps = 1/145 (0%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
M+E +FED FV++R+DP+GKKFD+VSR+EARSEQ MYM LDV +VYP+ EKF + L
Sbjct: 1 MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60
Query: 333 SATLNLDGTPDTGYFIQ-GRKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLM 157
+ TLNLDGTPDTGY+ Q GRKTLAD YEYVM+GK+YKI E S +AKVE+Y S+GGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 156 LLKGDPGNLSKFELDQRLFLLMRKV 82
LL+GDP + FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Cucumis sativus]
gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
[Cucumis sativus]
Length = 144
Score = 202 bits (515), Expect = 3e-50
Identities = 98/145 (67%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Frame = -3
Query: 513 MAEIMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVAL 334
M E++F+DIF I R++P+GKKFDKV+RIEA+SE+FDM+M LD+N E+YP+ GEKF++AL
Sbjct: 1 MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60
Query: 333 SATLNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLM 157
+ TLNLDGTPDTGYF+QG RK+LAD+YEYVM GK+++I ES SG K E+ S+GGLLM
Sbjct: 61 APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISES-SGHGGKAEIDASFGGLLM 119
Query: 156 LLKGDPGNLSKFELDQRLFLLMRKV 82
+LKGDP + SKFELDQRLFLL+RKV
Sbjct: 120 MLKGDPSHCSKFELDQRLFLLIRKV 144
>ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrata]
gi|297337642|gb|EFH68059.1| ATRPABC16.5 [Arabidopsis
lyrata subsp. lyrata]
Length = 146
Score = 202 bits (515), Expect = 3e-50
Identities = 98/142 (69%), Positives = 122/142 (85%), Gaps = 1/142 (0%)
Frame = -3
Query: 504 IMFEDIFVISRIDPEGKKFDKVSRIEARSEQFDMYMLLDVNIEVYPVSVGEKFTVALSAT 325
I+FEDIFV+ ++DP+GKKFDKV+R++A S +M+M LDVN EVYP++VG+KFT+AL+ T
Sbjct: 6 ILFEDIFVVDKLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLALAPT 65
Query: 324 LNLDGTPDTGYFIQG-RKTLADKYEYVMNGKVYKIDESGSGVSAKVELYVSYGGLLMLLK 148
LNLDGTPDTGYF G +KTLADKYEY+M+GK+YKI E G + K ELYVS+GGLLMLLK
Sbjct: 66 LNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLK 124
Query: 147 GDPGNLSKFELDQRLFLLMRKV 82
GDP ++S FELDQRLFLLMRK+
Sbjct: 125 GDPAHISHFELDQRLFLLMRKL 146