BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00002673
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001753075.1| predicted protein [Physcomitrella patens] gi...    92   9e-17
gb|ABR16298.1| unknown [Picea sitchensis]                              86   7e-15
ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    80   3e-13
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    78   1e-12
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    78   1e-12
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    78   1e-12
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr...    78   1e-12
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr...    78   1e-12
ref|XP_006382238.1| hypothetical protein POPTR_0005s00240g [Popu...    78   1e-12
ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|5...    78   1e-12
ref|XP_002330043.1| predicted protein [Populus trichocarpa]            78   1e-12
gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]       78   1e-12
gb|ESW35266.1| hypothetical protein PHAVU_001G220500g [Phaseolus...    77   2e-12
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   2e-12
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]    77   2e-12
ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Popu...    77   3e-12
ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Popu...    77   3e-12
ref|XP_002330040.1| predicted protein [Populus trichocarpa]            77   3e-12
ref|XP_006650834.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    76   4e-12
gb|EOY11809.1| DEAD box RNA helicase isoform 2 [Theobroma cacao]       76   4e-12

>ref|XP_001753075.1| predicted protein [Physcomitrella patens]
           gi|162695774|gb|EDQ82116.1| predicted protein
           [Physcomitrella patens]
          Length = 793

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/75 (58%), Positives = 53/75 (70%)
 Frame = -2

Query: 395 GGRKLTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGY 216
           G R +TPR V GVLS IWPTA D+VGKI I+DD+K +GAVFDLPEDVAK+ L K    G 
Sbjct: 594 GSRPMTPRVVMGVLSDIWPTAVDKVGKIKIVDDQKADGAVFDLPEDVAKELLSKPTRSGE 653

Query: 215 EVYAASKLPELEEED 171
            +     LP LEE++
Sbjct: 654 VIDVCQSLPRLEEDE 668


>gb|ABR16298.1| unknown [Picea sitchensis]
          Length = 802

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = -2

Query: 416 KDSSELMGGRKLTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLK 237
           ++S+   G ++L  R++ G+LS +WP AAD+VGKI    D K EGAVFDLP+DVAK+ L 
Sbjct: 600 RESTMPDGRQQLNARELMGILSEMWPAAADKVGKIRTYGDGKAEGAVFDLPKDVAKELLL 659

Query: 236 KDILPGYEVYAASKLPELEEED 171
           K  LPGY V   ++LP +E+E+
Sbjct: 660 KQALPGYTVSKITQLPVMEDEE 681


>ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Glycine max]
          Length = 771

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/72 (51%), Positives = 52/72 (72%)
 Frame = -2

Query: 389 RKLTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEV 210
           R  + R + G LS ++P AAD+VGKI +I D KV+GAVFDLPE++AK+ L +DI PG  V
Sbjct: 570 RYFSARSITGFLSDVYPAAADEVGKIHLIADEKVQGAVFDLPEEIAKELLNRDIPPGNTV 629

Query: 209 YAASKLPELEEE 174
              +KLP L+++
Sbjct: 630 SKITKLPSLQDD 641


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 766

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 52/70 (74%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           ++ R V G LS ++PTAAD++GKI II D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 586 MSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISK 645

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 646 ITKLPVLQDD 655


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 767

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 52/70 (74%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           ++ R V G LS ++PTAAD++GKI II D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 586 MSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISK 645

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 646 ITKLPVLQDD 655


>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 768

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 52/70 (74%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           ++ R V G LS ++PTAAD++GKI II D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 586 MSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISK 645

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 646 ITKLPVLQDD 655


>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
           gi|557525870|gb|ESR37176.1| hypothetical protein
           CICLE_v10027858mg [Citrus clementina]
          Length = 780

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 52/70 (74%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           ++ R V G LS ++PTAAD++GKI II D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 586 MSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISK 645

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 646 ITKLPVLQDD 655


>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
           gi|567862566|ref|XP_006423937.1| hypothetical protein
           CICLE_v10027858mg [Citrus clementina]
           gi|557525869|gb|ESR37175.1| hypothetical protein
           CICLE_v10027858mg [Citrus clementina]
           gi|557525871|gb|ESR37177.1| hypothetical protein
           CICLE_v10027858mg [Citrus clementina]
          Length = 779

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 52/70 (74%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           ++ R V G LS ++PTAAD++GKI II D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 586 MSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISK 645

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 646 ITKLPVLQDD 655


>ref|XP_006382238.1| hypothetical protein POPTR_0005s00240g [Populus trichocarpa]
           gi|550337589|gb|ERP60035.1| hypothetical protein
           POPTR_0005s00240g [Populus trichocarpa]
          Length = 731

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 51/70 (72%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++P AAD+VGKI +I D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 505 LSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAK 564

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 565 ITKLPALQDD 574


>ref|XP_002330044.1| predicted protein [Populus trichocarpa]
           gi|566168507|ref|XP_006382239.1| hypothetical protein
           POPTR_0005s00240g [Populus trichocarpa]
           gi|550337590|gb|ERP60036.1| hypothetical protein
           POPTR_0005s00240g [Populus trichocarpa]
          Length = 775

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 51/70 (72%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++P AAD+VGKI +I D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 596 LSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAK 655

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 656 ITKLPALQDD 665


>ref|XP_002330043.1| predicted protein [Populus trichocarpa]
          Length = 402

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 51/70 (72%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++P AAD+VGKI +I D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 176 LSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAK 235

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 236 ITKLPALQDD 245


>gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 481

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/70 (51%), Positives = 51/70 (72%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++P AAD+VGKI +I D +V+GAVFDLPE++AK+ L K I PG  +  
Sbjct: 302 LSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAK 361

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 362 ITKLPALQDD 371


>gb|ESW35266.1| hypothetical protein PHAVU_001G220500g [Phaseolus vulgaris]
          Length = 776

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/72 (52%), Positives = 52/72 (72%)
 Frame = -2

Query: 389 RKLTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEV 210
           R  + R V G LS ++ +AAD+VGKI II D +V+GAVFDLPE++AK+ L KDI PG  V
Sbjct: 574 RYFSARSVTGFLSDVFSSAADEVGKIHIIADERVQGAVFDLPEEIAKELLTKDIPPGNTV 633

Query: 209 YAASKLPELEEE 174
              +KLP L+++
Sbjct: 634 SKITKLPPLQDD 645


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
           protein product [Vitis vinifera]
          Length = 764

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/70 (48%), Positives = 52/70 (74%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++PTAAD++GKI ++ D +V+GAVFDLPE++AK+ L K + PG  +  
Sbjct: 579 LSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISK 638

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 639 ITKLPALQDD 648


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/70 (48%), Positives = 52/70 (74%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++PTAAD++GKI ++ D +V+GAVFDLPE++AK+ L K + PG  +  
Sbjct: 626 LSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISK 685

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 686 ITKLPALQDD 695


>ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
           gi|550337585|gb|ERP60031.1| hypothetical protein
           POPTR_0005s00200g [Populus trichocarpa]
          Length = 774

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 34/70 (48%), Positives = 51/70 (72%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++P AAD++GKI +I D +V+GAVFDLPE++AK+ L K + PG  +  
Sbjct: 598 LSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNTIEK 657

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 658 ITKLPALQDD 667


>ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
           gi|550337584|gb|ERP60030.1| hypothetical protein
           POPTR_0005s00200g [Populus trichocarpa]
          Length = 773

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 34/70 (48%), Positives = 51/70 (72%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++P AAD++GKI +I D +V+GAVFDLPE++AK+ L K + PG  +  
Sbjct: 598 LSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNTIEK 657

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 658 ITKLPALQDD 667


>ref|XP_002330040.1| predicted protein [Populus trichocarpa]
          Length = 735

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 34/70 (48%), Positives = 51/70 (72%)
 Frame = -2

Query: 383 LTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYA 204
           L+ R V G LS ++P AAD++GKI +I D +V+GAVFDLPE++AK+ L K + PG  +  
Sbjct: 559 LSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNTIEK 618

Query: 203 ASKLPELEEE 174
            +KLP L+++
Sbjct: 619 ITKLPALQDD 628


>ref|XP_006650834.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Oryza brachyantha]
          Length = 599

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
 Frame = -2

Query: 380 TPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLKKDILPGYEVYAA 201
           +PR V G LS +   AAD+VGKI +I D +V+GAVFDLPE++AKD L  ++ PG  +   
Sbjct: 405 SPRSVTGFLSDVSSAAADEVGKIYLIADERVQGAVFDLPEEIAKDLLSMELPPGNTITKV 464

Query: 200 SKLPELEEE-------------DSLFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFE 60
           +KLP L+++             D  F                                 +
Sbjct: 465 TKLPALQDDGPATDSYGRFSNSDRGFRSRRTRGGSRGGRGGWDSDGEDRFRRGGRSFRSD 524

Query: 59  DDSHGDGDNDWFGGRKSRQ 3
           +DS  + D+DW GGR+S +
Sbjct: 525 NDSWSEKDDDWSGGRRSNR 543


>gb|EOY11809.1| DEAD box RNA helicase isoform 2 [Theobroma cacao]
          Length = 732

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/81 (46%), Positives = 55/81 (67%)
 Frame = -2

Query: 416 KDSSELMGGRKLTPRDVRGVLSSIWPTAADQVGKICIIDDRKVEGAVFDLPEDVAKDFLK 237
           +DSS   G   L+ R V G LS ++P AAD+VGK+ +I D +V+GAVFDLPE++AK+ L 
Sbjct: 563 RDSSYSRGF--LSARSVTGFLSDVYPVAADEVGKVYLIADERVQGAVFDLPEEIAKELLN 620

Query: 236 KDILPGYEVYAASKLPELEEE 174
           K   PG  +   +KLP L+++
Sbjct: 621 KQTPPGNTISKITKLPPLQDD 641