BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00002532
         (417 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ...   186   3e-45
ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45
emb|CBI26002.3| unnamed protein product [Vitis vinifera]              184   8e-45
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   184   8e-45
gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [...   184   1e-44
ref|XP_004252946.1| PREDICTED: pentatricopeptide repeat-containi...   183   2e-44
gb|ESW26448.1| hypothetical protein PHAVU_003G120600g [Phaseolus...   181   7e-44
ref|XP_006349961.1| PREDICTED: pentatricopeptide repeat-containi...   181   9e-44
ref|XP_004298255.1| PREDICTED: pentatricopeptide repeat-containi...   181   9e-44
ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containi...   181   9e-44
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [S...   179   3e-43
ref|XP_006297445.1| hypothetical protein CARUB_v10013468mg, part...   179   3e-43
gb|ACG30078.1| PPR2 [Zea mays]                                        179   3e-43
ref|NP_001147821.1| pentatricopeptide repeat 2 [Zea mays] gi|195...   179   3e-43
ref|NP_001169349.1| pentatricopeptide repeat 2 [Zea mays] gi|309...   179   3e-43
ref|XP_002316075.2| hypothetical protein POPTR_0010s16360g [Popu...   179   4e-43
ref|NP_187294.1| pentatricopeptide repeat-containing protein [Ar...   179   4e-43

>ref|XP_004508090.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cicer arietinum]
          Length = 499

 Score =  186 bits (473), Expect = 2e-45
 Identities = 84/137 (61%), Positives = 105/137 (76%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           KF+ V  + EEM+   I+PNTVT+NI++ GYGKAG F +ME VLS ML S SC PD+WTM
Sbjct: 223 KFELVELMYEEMAQRSIMPNTVTQNIVLSGYGKAGMFDQMEKVLSSMLQSTSCKPDVWTM 282

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N +I VFGN G+++ ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 283 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 342

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 343 LQFPWTTSTYNNVIDAF 359



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 303 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIDA 358

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F + G+ + ME  + +  + G+  D +TF  LI+ +  A L+ K+ S +    K   P  
Sbjct: 359 FADAGDAKNMEYTFNQMRSEGMRADTKTFCCLINGFANAGLFHKVISSVHLAAKLETPEN 418

Query: 37  TATYNVVIHA 8
           TA YN V+ A
Sbjct: 419 TAFYNAVLSA 428



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           +L   M   G  P       L+  Y ++    E  ++L+EM     C PD++T + +I+V
Sbjct: 158 QLFTTMIEEGCDPTPELYTALLAAYCRSNMIDEALSILNEMKNHPLCQPDVFTYSTLIKV 217

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPW 41
             +  + E +E  YE+     I P+  T  I++S YG+A ++D+M  V+  M   TS   
Sbjct: 218 CVDAFKFELVELMYEEMAQRSIMPNTVTQNIVLSGYGKAGMFDQMEKVLSSMLQSTSCKP 277

Query: 40  TTATYNVVIHAF 5
              T N +I  F
Sbjct: 278 DVWTMNTIISVF 289


>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510921|gb|AES92063.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  186 bits (472), Expect = 3e-45
 Identities = 84/137 (61%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           KF+ +  L EEM+   I+PNTVT+NI++ GYGKAG F +ME VLS ML S  C PD+WTM
Sbjct: 224 KFELIELLYEEMAQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKPDVWTM 283

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N +I VFGN G+++ ME+WYEKF  +GIEP+ RTF ILI SYG+  +YDKM+SVMEYM K
Sbjct: 284 NTIIGVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 343

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 344 LQFPWTTSTYNNVIEAF 360



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 304 EKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEA 359

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F   G+ + ME  + +  + G+  D +TF  LI  +  A L+ K+ S ++   K  +P  
Sbjct: 360 FAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGLFHKVISSVQLAAKLEIPLN 419

Query: 37  TATYNVVIHA 8
           TA YN V+ A
Sbjct: 420 TAFYNAVLSA 429


>ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  184 bits (468), Expect = 8e-45
 Identities = 84/137 (61%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           KF  V  L EEM+   I+PNTVT+NI++ GYGKAG F +ME VLS ML S +C PD+WTM
Sbjct: 212 KFDLVELLYEEMAERSIMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKPDVWTM 271

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N +I VFGN G+++ ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 272 NTIISVFGNMGQIDMMEKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 331

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 332 LQFPWTTSTYNNVIEAF 348



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           +L   M   G+ P       L+  Y ++    E  +VL+EM     C PD++T + +I+V
Sbjct: 147 QLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPRCQPDVFTYSTLIKV 206

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPW 41
             +  + + +E  YE+     I P+  T  I++  YG+A ++D+M  V+  M   T+   
Sbjct: 207 CVDAFKFDLVELLYEEMAERSIMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKP 266

Query: 40  TTATYNVVIHAF 5
              T N +I  F
Sbjct: 267 DVWTMNTIISVF 278


>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  184 bits (468), Expect = 8e-45
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F+ V  L EEM    I PNTVT+NI++ GYGKAG+F EME VLS ML S S  PD+WTM
Sbjct: 230 RFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM 289

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGN+G++E ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 290 NTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 350 LQFPWTTSTYNNVIEAF 366



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           EL + M   G  P T     L+  Y ++    E  ++L++M T   C PD++T + +++ 
Sbjct: 165 ELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKA 224

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPW 41
             +    E +E  YE+ +   I P+  T  I++S YG+A  +D+M  V+  M   TS   
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 40  TTATYNVVIHAF 5
              T N ++  F
Sbjct: 285 DVWTMNTILSLF 296



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 310 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEA 365

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDK------MASVMEYMHK 56
           F + G+ + ME  +++    G++ D +TF  LI  Y  A L+ K      M  V   M  
Sbjct: 366 FSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMERVFNRMKD 425

Query: 55  TSLPWTTATYNVVIHAFK 2
                 + TY++++ A+K
Sbjct: 426 KHCQPDSTTYSIMVEAYK 443


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  184 bits (468), Expect = 8e-45
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F+ V  L EEM    I PNTVT+NI++ GYGKAG+F EME VLS ML S S  PD+WTM
Sbjct: 230 RFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM 289

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGN+G++E ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 290 NTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 350 LQFPWTTSTYNNVIEAF 366



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 310 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEA 365

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F + G+ + ME  +++    G++ D +TF  LI  Y  A L+ K+ S ++   K  +P  
Sbjct: 366 FSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPEN 425

Query: 37  TATYNVVIHA 8
           T+ YN VI A
Sbjct: 426 TSFYNAVISA 435



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           EL + M   G  P T     L+  Y ++    E  ++L++M T   C PD++T + +++ 
Sbjct: 165 ELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKA 224

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPW 41
             +    E +E  YE+ +   I P+  T  I++S YG+A  +D+M  V+  M   TS   
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 40  TTATYNVVIHAF 5
              T N ++  F
Sbjct: 285 DVWTMNTILSLF 296


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  184 bits (468), Expect = 8e-45
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F+ V  L EEM    I PNTVT+NI++ GYGKAG+F EME VLS ML S S  PD+WTM
Sbjct: 230 RFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTM 289

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGN+G++E ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 290 NTILSLFGNKGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 350 LQFPWTTSTYNNVIEAF 366



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 310 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEA 365

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F + G+ + ME  +++    G++ D +TF  LI  Y  A L+ K+ S ++   K  +P  
Sbjct: 366 FSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPEN 425

Query: 37  TATYNVVIHA 8
           T+ YN VI A
Sbjct: 426 TSFYNAVISA 435



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           EL + M   G  P T     L+  Y ++    E  ++L++M T   C PD++T + +++ 
Sbjct: 165 ELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKA 224

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPW 41
             +    E +E  YE+ +   I P+  T  I++S YG+A  +D+M  V+  M   TS   
Sbjct: 225 CVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKP 284

Query: 40  TTATYNVVIHAF 5
              T N ++  F
Sbjct: 285 DVWTMNTILSLF 296


>gb|EMJ25531.1| hypothetical protein PRUPE_ppa020554mg, partial [Prunus persica]
          Length = 485

 Score =  184 bits (466), Expect = 1e-44
 Identities = 83/137 (60%), Positives = 106/137 (77%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           KF+ V  L EEM+   I PNTVT+NI++ GYGKAG++ +ME VLS ML   +C PD+WTM
Sbjct: 225 KFELVESLYEEMAERLITPNTVTQNIVLSGYGKAGKYDQMEKVLSGMLEGATCKPDVWTM 284

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ VFGN+G+++ MERWYEKF  +GIEP+ RTF ILI +YG+ +LYDKM++VMEYM K
Sbjct: 285 NVILSVFGNKGQIDMMERWYEKFRDFGIEPETRTFNILIGAYGKKKLYDKMSTVMEYMRK 344

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTTATYN VI AF
Sbjct: 345 LQFPWTTATYNNVIEAF 361



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M  V+  M   +   P  WT    NNVI  
Sbjct: 305 EKFRDFGIEPETRTFNILIGAYGKKKLYDKMSTVMEYMRKLQ--FP--WTTATYNNVIEA 360

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F + G+ + ME  +++    G++ D +TF  LI+ Y  A L+ K+ S ++   K  +P  
Sbjct: 361 FADVGDAKNMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVVSSVQLAGKFEIPEN 420

Query: 37  TATYNVVIHA 8
           T  YN VI A
Sbjct: 421 TTFYNAVIAA 430



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           +L + M   G  P       L+  Y +     E  +VL++M T   C PD++T + +I+V
Sbjct: 160 QLFDAMVEEGCEPTLELYTALLTAYCRNNLIDEAFSVLNQMKTLPHCQPDVFTYSTLIKV 219

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK--TSLP 44
             +  + E +E  YE+     I P+  T  I++S YG+A  YD+M  V+  M +  T  P
Sbjct: 220 CIDALKFELVESLYEEMAERLITPNTVTQNIVLSGYGKAGKYDQMEKVLSGMLEGATCKP 279

Query: 43  WTTATYNVVIHAF 5
               T NV++  F
Sbjct: 280 -DVWTMNVILSVF 291


>ref|XP_004252946.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Solanum lycopersicum]
          Length = 495

 Score =  183 bits (465), Expect = 2e-44
 Identities = 83/137 (60%), Positives = 108/137 (78%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F  V  L E+M+   I+PNTVT+NI++ GYG+AG+++EME VLS ML S    PDIWTM
Sbjct: 218 RFDLVDSLYEQMAERSIVPNTVTQNIVLSGYGRAGKYEEMEKVLSGMLESTDSRPDIWTM 277

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGN+G++E MERWYEKF ++GIEP+ RTF ILIS+YG+  +YDKM+SVMEYM K
Sbjct: 278 NTILSLFGNKGQVEMMERWYEKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVMEYMRK 337

Query: 55  TSLPWTTATYNVVIHAF 5
            S PWTT+TYN VI AF
Sbjct: 338 LSFPWTTSTYNNVIEAF 354



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 41/127 (32%), Positives = 67/127 (52%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGN 209
           E+  + GI P T T NILI  YGK   + +M +V+ E +   S      T NNVI  F +
Sbjct: 298 EKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVM-EYMRKLSFPWTTSTYNNVIEAFSD 356

Query: 208 RGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTAT 29
            G+ + ME  +++    G++ D +TF  LI  Y  A L+ K+ + ++   K  +P   + 
Sbjct: 357 IGDAKHMEYTFDQMRAEGVKGDTKTFCCLIRGYANAGLFPKVINAVQLAGKLEIPENNSF 416

Query: 28  YNVVIHA 8
           ++ VI+A
Sbjct: 417 FSSVIYA 423


>gb|ESW26448.1| hypothetical protein PHAVU_003G120600g [Phaseolus vulgaris]
          Length = 493

 Score =  181 bits (460), Expect = 7e-44
 Identities = 81/137 (59%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           KF  V  L EEM+   + PNTVT+NI++ GYGKAG+F +ME VLS ML S +C PD+WTM
Sbjct: 214 KFDLVELLYEEMAERSVTPNTVTQNIVLGGYGKAGKFDQMEKVLSSMLESTTCKPDVWTM 273

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N +I VFGN G+++ ME+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM +
Sbjct: 274 NTIISVFGNIGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRR 333

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+T+N VI AF
Sbjct: 334 LQFPWTTSTFNNVIEAF 350



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWT---MNNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 294 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRRLQ--FP--WTTSTFNNVIEA 349

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F + G++  ME  +++    G++ D +TF  LI  Y  A L+ K+ S +    K  +P  
Sbjct: 350 FADAGDVRHMECTFDQMRAEGMKADTKTFCCLIKGYANAGLFHKVISSVHLAGKFEIPQN 409

Query: 37  TATYNVVIHA 8
            A YN V+ A
Sbjct: 410 IAFYNAVLSA 419



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           +L   M   G+ P       L+  Y ++    E  ++L+EM     C PD++T + +I+V
Sbjct: 149 QLFTTMIEEGLEPTPHLYTALLAAYCRSNLIDEAFSILNEMKKLPLCQPDVFTYSTLIKV 208

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPW 41
             +  + + +E  YE+     + P+  T  I++  YG+A  +D+M  V+  M   T+   
Sbjct: 209 CVDAFKFDLVELLYEEMAERSVTPNTVTQNIVLGGYGKAGKFDQMEKVLSSMLESTTCKP 268

Query: 40  TTATYNVVIHAF 5
              T N +I  F
Sbjct: 269 DVWTMNTIISVF 280


>ref|XP_006349961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Solanum tuberosum]
          Length = 495

 Score =  181 bits (459), Expect = 9e-44
 Identities = 82/137 (59%), Positives = 107/137 (78%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F  V  L E+M+   I+PNTVT+NI++ GYG+AG+++EME VL  ML S    PDIWTM
Sbjct: 218 RFDLVDSLYEQMTERSIVPNTVTQNIVLSGYGRAGKYEEMEKVLLGMLESTDSRPDIWTM 277

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGN+G++E MERWYEKF ++GIEP+ RTF ILIS+YG+  +YDKM+SVMEYM K
Sbjct: 278 NTILSLFGNKGQVEMMERWYEKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVMEYMRK 337

Query: 55  TSLPWTTATYNVVIHAF 5
            S PWTT+TYN VI AF
Sbjct: 338 LSFPWTTSTYNNVIEAF 354



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 42/127 (33%), Positives = 66/127 (51%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRVFGN 209
           E+  + GI P T T NILI  YGK   + +M +V+ E +   S      T NNVI  F +
Sbjct: 298 EKFCSFGIEPETRTFNILISAYGKKRMYDKMSSVM-EYMRKLSFPWTTSTYNNVIEAFSD 356

Query: 208 RGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTAT 29
            G+ + ME  +++    G + D +TF  LI  Y  A L+ K+ S ++   K  +P   + 
Sbjct: 357 IGDAKHMEYTFDQMRAEGAKGDTKTFCCLIRGYANAGLFPKVISTVQLAGKLEIPENNSF 416

Query: 28  YNVVIHA 8
           ++ VI+A
Sbjct: 417 FSSVIYA 423


>ref|XP_004298255.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 484

 Score =  181 bits (459), Expect = 9e-44
 Identities = 80/137 (58%), Positives = 103/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F+ V  L EEM    I PNTVT+N+++ GYGKAG + +ME VLS ML  ESC PD+WTM
Sbjct: 219 QFEMVESLYEEMDTRSISPNTVTQNVVLSGYGKAGMYDQMERVLSGMLEGESCKPDVWTM 278

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGN+G++E MERWY+KF  +GIEP+ RT  ILI +YG+  +YDKM++VMEYM K
Sbjct: 279 NVILTIFGNKGQIEMMERWYQKFRDFGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRK 338

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTTATYN VI AF
Sbjct: 339 LHFPWTTATYNNVIEAF 355



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
 Frame = -3

Query: 370 GILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRVFGNRGE 200
           GI P T T NILI  YGK   + +M  V+  M       P  WT    NNVI  F + G+
Sbjct: 305 GIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLH--FP--WTTATYNNVIEAFADVGD 360

Query: 199 LETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWTTATYNV 20
            + ME  +++     ++ D +TF  LI+ Y  A L+ K+ S ++   K  +P  T  YN 
Sbjct: 361 AKNMEYTFDQMRAENMKADTKTFCCLINGYANAGLFHKVISSVQLAGKFEIPENTTFYNA 420

Query: 19  VIHA 8
           VI A
Sbjct: 421 VISA 424



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
 Frame = -3

Query: 394 LLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRVF 215
           L +EM   G  P       L+  Y ++    E   VL++M T   C PD++T + +I+  
Sbjct: 155 LFDEMVEEGCQPTAELYTALLTAYCRSNLIHEAFGVLNQMKTLAQCQPDVFTYSTLIKAC 214

Query: 214 GNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPWT 38
            +  + E +E  YE+ +T  I P+  T  +++S YG+A +YD+M  V+  M    S    
Sbjct: 215 IDNLQFEMVESLYEEMDTRSISPNTVTQNVVLSGYGKAGMYDQMERVLSGMLEGESCKPD 274

Query: 37  TATYNVVIHAF 5
             T NV++  F
Sbjct: 275 VWTMNVILTIF 285


>ref|XP_006600379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Glycine max]
          Length = 488

 Score =  181 bits (459), Expect = 9e-44
 Identities = 83/137 (60%), Positives = 102/137 (74%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           KF  V  L EEM+   I PNTVT+NI++ GYGKAG F +ME VLS ML S +C PD+WTM
Sbjct: 212 KFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKPDVWTM 271

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N +I VFGN G+++  E+WYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 272 NTIISVFGNMGQIDMTEKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 331

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 332 LQFPWTTSTYNNVIEAF 348



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           +L   M   G+ P       L+  Y ++    E  +VL+EM     C PD++T + +I+V
Sbjct: 147 QLFTTMIEEGLEPTPELYTALLAAYCRSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKV 206

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYM-HKTSLPW 41
             +  + + ++  YE+     I P+  T  I++  YG+A ++D+M  V+  M   T+   
Sbjct: 207 CVDAFKFDLVQLLYEEMAERSITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKP 266

Query: 40  TTATYNVVIHAF 5
              T N +I  F
Sbjct: 267 DVWTMNTIISVF 278


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  179 bits (455), Expect = 3e-43
 Identities = 81/137 (59%), Positives = 103/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F+ V  L EEM+   I PNTVT+NI++ GYGK G++ +ME VL  ML S +C PD+WTM
Sbjct: 228 RFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTM 287

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ VFGN+G +E MERWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 288 NIILSVFGNKGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 347

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 348 LQFPWTTSTYNNVIEAF 364



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 308 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQ--FP--WTTSTYNNVIEA 363

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F + G+ + ME  +E+    G+  D +TF  LI+ Y  A L+ K+   ++   K  +P  
Sbjct: 364 FADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEIPEN 423

Query: 37  TATYNVVIHA 8
           T+ YN VI A
Sbjct: 424 TSFYNAVISA 433


>ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
           gi|241924727|gb|EER97871.1| hypothetical protein
           SORBIDRAFT_02g001400 [Sorghum bicolor]
          Length = 560

 Score =  179 bits (455), Expect = 3e-43
 Identities = 78/137 (56%), Positives = 106/137 (77%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F  +  + ++M+   I PNTVT+NI++ GYGKAGR  +ME VLS+ML S +C PD+WTM
Sbjct: 292 RFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKPDVWTM 351

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGN+G++E ME+WYEKF +YGIEP+ RT  ILI +YG+  +YDKM++VMEYM K
Sbjct: 352 NIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRK 411

Query: 55  TSLPWTTATYNVVIHAF 5
            + PWTTATYN VI AF
Sbjct: 412 LAFPWTTATYNNVIEAF 428



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+  + GI P T T NILI  YGK   + +M  V+  M   +   P  WT    NNVI  
Sbjct: 372 EKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYM--RKLAFP--WTTATYNNVIEA 427

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F   G+ + ME  + +  + G++PD +TF  LI+ + +A  + K+  +++   +  +P  
Sbjct: 428 FAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKLAERLDVPAN 487

Query: 37  TATYNVVIHA 8
           T+ +N ++ A
Sbjct: 488 TSFHNAILGA 497


>ref|XP_006297445.1| hypothetical protein CARUB_v10013468mg, partial [Capsella rubella]
           gi|482566154|gb|EOA30343.1| hypothetical protein
           CARUB_v10013468mg, partial [Capsella rubella]
          Length = 515

 Score =  179 bits (454), Expect = 3e-43
 Identities = 80/137 (58%), Positives = 102/137 (74%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F  V  L +EM    I PNTVT+NI++ GYG+ GRF +ME VLS+ML S +C PD+WTM
Sbjct: 238 QFDLVDSLYKEMDERMITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 297

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ VFGN G+++ ME WYEKF  +GIEP+ RTF ILI SYG+  +YDKM+SVMEYM K
Sbjct: 298 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 357

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN +I AF
Sbjct: 358 LEFPWTTSTYNNIIEAF 374



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           K   +    E+    GI P T T NILI  YGK   + +M +V+  M   E   P  WT 
Sbjct: 309 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE--FP--WTT 364

Query: 235 ---NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEY 65
              NN+I  F + G+ + ME  +++  + G++ D +TF  LI+ Y  A L+ K+ S ++ 
Sbjct: 365 STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQL 424

Query: 64  MHKTSLPWTTATYNVVIHA 8
             K  +P  T+ YN VI A
Sbjct: 425 AAKFEIPENTSFYNAVIAA 443


>gb|ACG30078.1| PPR2 [Zea mays]
          Length = 580

 Score =  179 bits (454), Expect = 3e-43
 Identities = 80/137 (58%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F     + ++M+   I PNTVT+NI++ GYGKAGR  +ME VLS+ML S SC PD+WTM
Sbjct: 312 RFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTM 371

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGNRGE+E MERWYEKF  YG+EP+ RT  ILI +YG+  +YDKM++VME+M K
Sbjct: 372 NIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRK 431

Query: 55  TSLPWTTATYNVVIHAF 5
            + PWTTATYN VI AF
Sbjct: 432 LAFPWTTATYNNVIEAF 448



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    G+ P T T NILI  YGK   + +M  V+  M   +   P  WT    NNVI  
Sbjct: 392 EKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHM--RKLAFP--WTTATYNNVIEA 447

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F   G+   ME  + +  + G+ PD +TF  LI  + +A  + K+  +++   +  +P  
Sbjct: 448 FAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPAN 507

Query: 37  TATYNVVIHA 8
           T  +N V+ A
Sbjct: 508 TPFHNAVLGA 517


>ref|NP_001147821.1| pentatricopeptide repeat 2 [Zea mays] gi|195613946|gb|ACG28803.1|
           PPR2 [Zea mays]
          Length = 562

 Score =  179 bits (454), Expect = 3e-43
 Identities = 80/137 (58%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F     + ++M+   I PNTVT+NI++ GYGKAGR  +ME VLS+ML S SC PD+WTM
Sbjct: 294 RFDLTDTMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTM 353

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGNRGE+E MERWYEKF  YG+EP+ RT  ILI +YG+  +YDKM++VME+M K
Sbjct: 354 NIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRK 413

Query: 55  TSLPWTTATYNVVIHAF 5
            + PWTTATYN VI AF
Sbjct: 414 LAFPWTTATYNNVIEAF 430



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    G+ P T T NILI  YGK   + +M  V+  M   +   P  WT    NNVI  
Sbjct: 374 EKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHM--RKLAFP--WTTATYNNVIEA 429

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F   G+   ME  + +  + G+ PD +TF  LI  + +A  + K+  +++   +  +P  
Sbjct: 430 FAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVN 489

Query: 37  TATYNVVIHA 8
           T  +N V+ A
Sbjct: 490 TPFHNAVLGA 499


>ref|NP_001169349.1| pentatricopeptide repeat 2 [Zea mays] gi|30961817|gb|AAP37977.1|
           PPR2 [Zea mays] gi|224028857|gb|ACN33504.1| unknown [Zea
           mays] gi|414883415|tpg|DAA59429.1| TPA:
           pentatricopeptide repeat 2 [Zea mays]
          Length = 571

 Score =  179 bits (454), Expect = 3e-43
 Identities = 80/137 (58%), Positives = 104/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F     + ++M+   I PNTVT+NI++ GYGKAGR  +ME VLS+ML S SC PD+WTM
Sbjct: 303 RFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTM 362

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ +FGNRGE+E MERWYEKF  YG+EP+ RT  ILI +YG+  +YDKM++VME+M K
Sbjct: 363 NIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRK 422

Query: 55  TSLPWTTATYNVVIHAF 5
            + PWTTATYN VI AF
Sbjct: 423 LAFPWTTATYNNVIEAF 439



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    G+ P T T NILI  YGK   + +M  V+  M   +   P  WT    NNVI  
Sbjct: 383 EKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHM--RKLAFP--WTTATYNNVIEA 438

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F   G+   ME  + +  + G+ PD +TF  LI  + +A  + K+  +++   +  +P  
Sbjct: 439 FAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDGFSRAGQFHKVVGMVKLAERLDVPVN 498

Query: 37  TATYNVVIHA 8
           T  +N V+ A
Sbjct: 499 TPFHNAVLGA 508


>ref|XP_002316075.2| hypothetical protein POPTR_0010s16360g [Populus trichocarpa]
           gi|550329937|gb|EEF02246.2| hypothetical protein
           POPTR_0010s16360g [Populus trichocarpa]
          Length = 487

 Score =  179 bits (453), Expect = 4e-43
 Identities = 78/137 (56%), Positives = 103/137 (75%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F+ +  L +EM    I PNTVT+N+++ GYG+ G + +ME VLSEML S +C PD+WTM
Sbjct: 220 RFELIDTLYQEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKPDVWTM 279

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ VFGN G+++ MERWYEKF  +GIEP+ RTF ILI +YG+  +YDKM+SVMEYM K
Sbjct: 280 NIILSVFGNEGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRK 339

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN VI AF
Sbjct: 340 VQFPWTTSTYNNVIEAF 356



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
 Frame = -3

Query: 388 EEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM---NNVIRV 218
           E+    GI P T T NILI  YGK   + +M +V+  M   +   P  WT    NNVI  
Sbjct: 300 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQ--FP--WTTSTYNNVIEA 355

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHKTSLPWT 38
           F + G+ + ME  +++     ++ D +TF  LI+ Y  A L+ K+ S ++   K  +P  
Sbjct: 356 FADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPEN 415

Query: 37  TATYNVVIHA 8
           T+ +N VI A
Sbjct: 416 TSFFNAVISA 425



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
 Frame = -3

Query: 397 ELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTMNNVIRV 218
           +L +EM   GI P T     L+  Y +     E  +++++M +   C PD++T + +++ 
Sbjct: 155 QLFDEMVEEGIEPTTELYTALLAAYCRNNLIDEGFSIINQMKSLPRCQPDVYTYSTLLKA 214

Query: 217 FGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVM-EYMHKTSLPW 41
             +    E ++  Y++ +   I P+  T  +++S YG+  +YD+M  V+ E +   +   
Sbjct: 215 CVDASRFELIDTLYQEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKP 274

Query: 40  TTATYNVVIHAF 5
              T N+++  F
Sbjct: 275 DVWTMNIILSVF 286


>ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2750; Flags: Precursor
           gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein
           [Arabidopsis thaliana] gi|20466300|gb|AAM20467.1|
           unknown protein [Arabidopsis thaliana]
           gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis
           thaliana] gi|332640870|gb|AEE74391.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 486

 Score =  179 bits (453), Expect = 4e-43
 Identities = 80/137 (58%), Positives = 102/137 (74%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           +F  V  L +EM    I PNTVT+NI++ GYG+ GRF +ME VLS+ML S +C PD+WTM
Sbjct: 210 QFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTM 269

Query: 235 NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEYMHK 56
           N ++ VFGN G+++ ME WYEKF  +GIEP+ RTF ILI SYG+  +YDKM+SVMEYM K
Sbjct: 270 NIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRK 329

Query: 55  TSLPWTTATYNVVIHAF 5
              PWTT+TYN +I AF
Sbjct: 330 LEFPWTTSTYNNIIEAF 346



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
 Frame = -3

Query: 415 KFKCVSELLEEMSAMGILPNTVTKNILIRGYGKAGRFQEMENVLSEMLTSESCIPDIWTM 236
           K   +    E+    GI P T T NILI  YGK   + +M +V+  M   E   P  WT 
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLE--FP--WTT 336

Query: 235 ---NNVIRVFGNRGELETMERWYEKFETYGIEPDIRTFEILISSYGQAELYDKMASVMEY 65
              NN+I  F + G+ + ME  +++  + G++ D +TF  LI+ Y  A L+ K+ S ++ 
Sbjct: 337 STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQL 396

Query: 64  MHKTSLPWTTATYNVVIHA 8
             K  +P  TA YN VI A
Sbjct: 397 AAKFEIPENTAFYNAVISA 415