BLASTX nr result

ID: Ephedra25_contig00002504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00002504
         (528 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23317.1| unknown [Picea sitchensis]                              96   4e-18
ref|XP_001785488.1| predicted protein [Physcomitrella patens] gi...    64   2e-08
ref|XP_001773383.1| predicted protein [Physcomitrella patens] gi...    60   4e-07

>gb|ABK23317.1| unknown [Picea sitchensis]
          Length = 289

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/78 (55%), Positives = 60/78 (76%)
 Frame = -1

Query: 528 GLNSTQEECSKCGGSGM*KRNLCKTTGIVEIEGAFKDVIPCPLCLGSGMEKCLSCDGVRS 349
           GL+S+QEEC++C G G+ + +LCK TG +E +G F+ VI CPLCLGS M+KC SCDGVR 
Sbjct: 209 GLSSSQEECTRCSGYGVERCHLCKCTGSIEYQGEFRHVILCPLCLGSCMKKCTSCDGVRI 268

Query: 348 KRGMPLFLINKSQKASKQ 295
           K+G+P FL  +  ++SK+
Sbjct: 269 KKGVPPFLQQEQFRSSKK 286


>ref|XP_001785488.1| predicted protein [Physcomitrella patens]
           gi|162662895|gb|EDQ49695.1| predicted protein
           [Physcomitrella patens]
          Length = 413

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -1

Query: 513 QEECSKCGGSGM*KRNLCKTTGIVEIEGAFKDVIPCPLCLGSGMEKCLSCDGVRSKRGMP 334
           Q+ C KC G G+   ++C+  GI+  EG  +   PCPLC+G  +EKC SC GV+ ++G+P
Sbjct: 338 QKVCEKCDGYGVQSCHVCQGRGILTWEGKLRHTDPCPLCIGRCIEKCSSCGGVKRRKGLP 397


>ref|XP_001773383.1| predicted protein [Physcomitrella patens]
           gi|162675259|gb|EDQ61756.1| predicted protein
           [Physcomitrella patens]
          Length = 413

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = -1

Query: 513 QEECSKCGGSGM*KRNLCKTTGIVEIEGAFKDVIPCPLCLGSGMEKCLSCDGVRSKRGMP 334
           Q+ C KC G G+   ++CK  G +  EG      PCPLC G  ++KC SC GV+ KRG P
Sbjct: 339 QKLCEKCDGYGVRPCHVCKGLGTLTWEGKLLHTDPCPLCFGRCVKKCSSCGGVKIKRGPP 398

Query: 333 LFLI 322
             L+
Sbjct: 399 PALL 402


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