BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00002484
         (958 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts...    83   2e-13
ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Popu...    82   4e-13
ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts...    82   4e-13
ref|XP_002523924.1| Regulator of nonsense transcripts, putative ...    81   7e-13
ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts...    80   9e-13
gb|ABP01543.1| UPF2, partial [Nicotiana attenuata]                     80   9e-13
gb|EOY18506.1| Regulator of nonsense transcripts 2 isoform 3 [Th...    80   1e-12
gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Th...    80   1e-12
ref|XP_003546565.1| PREDICTED: regulator of nonsense transcripts...    79   3e-12
ref|XP_004488277.1| PREDICTED: regulator of nonsense transcripts...    78   4e-12
ref|XP_004488276.1| PREDICTED: regulator of nonsense transcripts...    78   4e-12
ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Popu...    78   4e-12
gb|EXB30382.1| Regulator of nonsense transcripts 2 [Morus notabi...    78   6e-12
gb|ESW10518.1| hypothetical protein PHAVU_009G216500g [Phaseolus...    78   6e-12
ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of...    77   7e-12
ref|XP_003595517.1| Pentatricopeptide repeat-containing protein ...    77   7e-12
gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-framesh...    77   7e-12
ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts...    77   1e-11
ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts...    77   1e-11
gb|EMJ21494.1| hypothetical protein PRUPE_ppa000441mg [Prunus pe...    76   2e-11

>ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1
           [Solanum tuberosum] gi|565347048|ref|XP_006340546.1|
           PREDICTED: regulator of nonsense transcripts UPF2-like
           isoform X2 [Solanum tuberosum]
           gi|565347050|ref|XP_006340547.1| PREDICTED: regulator of
           nonsense transcripts UPF2-like isoform X3 [Solanum
           tuberosum]
          Length = 1197

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 45/95 (47%), Positives = 62/95 (65%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+ S     KD+S LE+L DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRVTSGEDASSPGGSKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANKVFQQWHRKSLPWPPNSESSETA 286
            E EPK +++A     +    S+   P+++ ++TA
Sbjct: 379 GEAEPKLSEQA-----KGQEHSIDSTPDADETQTA 408


>ref|XP_002312048.2| hypothetical protein POPTR_0008s04510g [Populus trichocarpa]
           gi|550332418|gb|EEE89415.2| hypothetical protein
           POPTR_0008s04510g [Populus trichocarpa]
          Length = 1171

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 44/77 (57%), Positives = 52/77 (67%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+ S   A KD S LE+L DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRVTSGEDASSPAAGKDTSLLEALWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANKVFQQ 232
            E EPKA + + K   Q
Sbjct: 379 GEAEPKANEHSAKTQDQ 395


>ref|XP_004237528.1| PREDICTED: regulator of nonsense transcripts 2-like [Solanum
           lycopersicum]
          Length = 1188

 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+ S     KD+S+LE+L DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRVTSGEDASSPGGSKDSSSLEALWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANKV 223
            E EPK +++  KV
Sbjct: 379 GEAEPKLSEQLAKV 392


>ref|XP_002523924.1| Regulator of nonsense transcripts, putative [Ricinus communis]
           gi|223536854|gb|EEF38493.1| Regulator of nonsense
           transcripts, putative [Ricinus communis]
          Length = 824

 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 46/92 (50%), Positives = 59/92 (64%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVT+ E+ S     KD+S LE+L DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRVTTGEDASSPATGKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANKVFQQWHRKSLPWPPNSESS 277
            E EPK  +++ K  +Q    S P    +ESS
Sbjct: 379 GEAEPKVNEQSVKTQEQ---PSQPTQDTAESS 407


>ref|XP_004296960.1| PREDICTED: regulator of nonsense transcripts 2-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 44/95 (46%), Positives = 60/95 (63%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+ S   A KD+S LE++ DD+DT+ FYE L DLRAFVP  LL
Sbjct: 329 QPPVMPEDGHTTRVTSGEDASSPAAGKDSSALEAIWDDEDTRAFYECLPDLRAFVPAVLL 388

Query: 182 REPEPKATKKANKVFQQWHRKSLPWPPNSESSETA 286
            E E K  +++ K  +Q    +     N +++E A
Sbjct: 389 GEAESKVNEQSAKTQEQPTEPAAESDQNQQATEEA 423


>gb|ABP01543.1| UPF2, partial [Nicotiana attenuata]
          Length = 369

 Score = 80.5 bits (197), Expect = 9e-13
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS ++ S   A KD+S LE+L DD+DT+ FYE L DLRAFVP  LL
Sbjct: 198 QPPVMPEDGHTTRVTSGDDASSPGASKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 257

Query: 182 REPEPKATKKANK 220
            E EPK++++  K
Sbjct: 258 GEAEPKSSEQPLK 270


>gb|EOY18506.1| Regulator of nonsense transcripts 2 isoform 3 [Theobroma cacao]
           gi|508726610|gb|EOY18507.1| Regulator of nonsense
           transcripts 2 isoform 3 [Theobroma cacao]
          Length = 1046

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 41/77 (53%), Positives = 54/77 (70%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           Q PVM +DS+T RVT+ E+ S     K++STLE++ DDDDT+ FYE L DLRAFVP  LL
Sbjct: 172 QSPVMPEDSHTTRVTTGEDASSPATGKESSTLEAIWDDDDTRAFYECLPDLRAFVPAVLL 231

Query: 182 REPEPKATKKANKVFQQ 232
            E EPK  ++ +K  +Q
Sbjct: 232 GEAEPKGIEQTSKAQEQ 248


>gb|EOY18504.1| Regulator of nonsense transcripts 2 isoform 1 [Theobroma cacao]
           gi|508726608|gb|EOY18505.1| Regulator of nonsense
           transcripts 2 isoform 1 [Theobroma cacao]
          Length = 1193

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 41/77 (53%), Positives = 54/77 (70%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           Q PVM +DS+T RVT+ E+ S     K++STLE++ DDDDT+ FYE L DLRAFVP  LL
Sbjct: 319 QSPVMPEDSHTTRVTTGEDASSPATGKESSTLEAIWDDDDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANKVFQQ 232
            E EPK  ++ +K  +Q
Sbjct: 379 GEAEPKGIEQTSKAQEQ 395


>ref|XP_003546565.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Glycine
           max]
          Length = 1187

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+G  + + KD+S +E + DD+DT+ FYE L DLRAFVP  LL
Sbjct: 313 QPPVMPEDGHTTRVTSGEDGVSSASGKDSSVVEPIWDDEDTRTFYECLPDLRAFVPAVLL 372

Query: 182 REPEPKATKKANK 220
            E EPK+++++ K
Sbjct: 373 GETEPKSSEQSAK 385


>ref|XP_004488277.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X2
           [Cicer arietinum]
          Length = 1198

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS EE   + A KD+S +E + DD+DT+ FYE L DLRAFVP  LL
Sbjct: 325 QPPVMPEDGHTTRVTSGEEAISSTAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 384

Query: 182 REPEPKATKKANK 220
            E EPK  +++ K
Sbjct: 385 GETEPKVNEQSVK 397


>ref|XP_004488276.1| PREDICTED: regulator of nonsense transcripts UPF2-like isoform X1
           [Cicer arietinum]
          Length = 1199

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS EE   + A KD+S +E + DD+DT+ FYE L DLRAFVP  LL
Sbjct: 326 QPPVMPEDGHTTRVTSGEEAISSTAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 385

Query: 182 REPEPKATKKANK 220
            E EPK  +++ K
Sbjct: 386 GETEPKVNEQSVK 398


>ref|XP_002315268.1| hypothetical protein POPTR_0010s22310g [Populus trichocarpa]
           gi|222864308|gb|EEF01439.1| hypothetical protein
           POPTR_0010s22310g [Populus trichocarpa]
          Length = 1194

 Score = 78.2 bits (191), Expect = 4e-12
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T R+TS E+ S   A KD+S LE+L DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRLTSGEDISSPAAGKDSSVLEALWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANKVFQQ 232
            E EPKA   + K   Q
Sbjct: 379 GEVEPKANDHSVKTQDQ 395


>gb|EXB30382.1| Regulator of nonsense transcripts 2 [Morus notabilis]
          Length = 1191

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 45/93 (48%), Positives = 58/93 (62%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+ S   A KD+S +E+L DD+DT+ FYE L DLRAFVP  LL
Sbjct: 320 QPPVMPEDGHTTRVTSGEDTSSTAAGKDSSVVEALWDDEDTRAFYECLPDLRAFVPAVLL 379

Query: 182 REPEPKATKKANKVFQQWHRKSLPWPPNSESSE 280
            E E K  +++ K  +Q      P  P  ES +
Sbjct: 380 GETESKLNEQSVKTQEQ------PTEPAPESDQ 406


>gb|ESW10518.1| hypothetical protein PHAVU_009G216500g [Phaseolus vulgaris]
          Length = 1195

 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 39/73 (53%), Positives = 54/73 (73%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS EEG  + + KD+S +E + DD+DT+ FYE L DLRAFVP  LL
Sbjct: 313 QPPVMPEDGHTTRVTSGEEGISSASGKDSSVVEPIWDDEDTRTFYECLPDLRAFVPAVLL 372

Query: 182 REPEPKATKKANK 220
            E E K++++++K
Sbjct: 373 GETEQKSSEQSSK 385


>ref|XP_004169074.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
           2-like, partial [Cucumis sativus]
          Length = 1144

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 39/73 (53%), Positives = 53/73 (72%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RV++ E+ S   A KD+S +E++ DD+DT+ FYE L DLRAFVP  LL
Sbjct: 267 QPPVMPEDGHTTRVSAXEDVSSPAAGKDSSVIEAIWDDEDTRAFYECLPDLRAFVPAVLL 326

Query: 182 REPEPKATKKANK 220
            E EPKA +++ K
Sbjct: 327 GEAEPKANEQSAK 339


>ref|XP_003595517.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484565|gb|AES65768.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1705

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS EE   + A KD+S +E + DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANK 220
            E EPK  +++ K
Sbjct: 379 GETEPKVNEQSVK 391


>gb|ABD32424.2| Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2
           [Medicago truncatula]
          Length = 1212

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 40/73 (54%), Positives = 51/73 (69%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS EE   + A KD+S +E + DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRVTSGEEAVSSAAGKDSSVVEPIWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANK 220
            E EPK  +++ K
Sbjct: 379 GETEPKVNEQSVK 391


>ref|XP_004143811.1| PREDICTED: regulator of nonsense transcripts 2-like [Cucumis
           sativus]
          Length = 1195

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 39/73 (53%), Positives = 53/73 (72%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RV++ E+ S   A KD+S +E++ DD+DT+ FYE L DLRAFVP  LL
Sbjct: 318 QPPVMPEDGHTTRVSAGEDVSSPAAGKDSSVIEAIWDDEDTRAFYECLPDLRAFVPAVLL 377

Query: 182 REPEPKATKKANK 220
            E EPKA +++ K
Sbjct: 378 GEAEPKANEQSAK 390


>ref|XP_003533845.1| PREDICTED: regulator of nonsense transcripts UPF2 [Glycine max]
          Length = 1188

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 38/73 (52%), Positives = 53/73 (72%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+G  + + KD+S +E + DD+D + FYE L DLRAFVP  LL
Sbjct: 313 QPPVMPEDGHTTRVTSGEDGISSASGKDSSVVEPIWDDEDARTFYECLPDLRAFVPAVLL 372

Query: 182 REPEPKATKKANK 220
            E EPK+++++ K
Sbjct: 373 GETEPKSSEQSAK 385


>gb|EMJ21494.1| hypothetical protein PRUPE_ppa000441mg [Prunus persica]
          Length = 1182

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 44/95 (46%), Positives = 61/95 (64%)
 Frame = +2

Query: 2   QPPVMLKDSNTKRVTSREEGSQANAPKDASTLESLRDDDDTKFFYEGLLDLRAFVPTELL 181
           QPPVM +D +T RVTS E+ S   A KD+S LE++ DD+DT+ FYE L DLRAFVP  LL
Sbjct: 319 QPPVMPEDGHTTRVTSGEDASSPAAGKDSSVLEAIWDDEDTRAFYECLPDLRAFVPAVLL 378

Query: 182 REPEPKATKKANKVFQQWHRKSLPWPPNSESSETA 286
            E E K+  ++ K  +Q    +L    + +++E A
Sbjct: 379 GEAE-KSNDQSAKTQEQPTEPTLESDQSQQTAEDA 412