BLASTX nr result

ID: Ephedra25_contig00002418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00002418
         (1675 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th...   278   4e-72
ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A...   272   3e-70
gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa...   271   5e-70
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264...   268   7e-69
emb|CBI29694.3| unnamed protein product [Vitis vinifera]              266   2e-68
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...   265   3e-68
gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe...   265   4e-68
gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe...   265   4e-68
gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus pe...   261   5e-67
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   259   2e-66
ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5...   259   2e-66
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   257   9e-66
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   257   9e-66
ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296...   256   2e-65
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...   255   5e-65
gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis]     254   6e-65
gb|EOY26875.1| Smg-4/UPF3 family protein, putative isoform 6 [Th...   254   6e-65
gb|EOY26874.1| Smg-4/UPF3 family protein, putative isoform 5 [Th...   254   6e-65
gb|EOY26871.1| Smg-4/UPF3 family protein, putative isoform 2 [Th...   254   6e-65
gb|EOY26870.1| Smg-4/UPF3 family protein, putative isoform 1 [Th...   254   6e-65

>gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  278 bits (712), Expect = 4e-72
 Identities = 150/256 (58%), Positives = 187/256 (73%), Gaps = 10/256 (3%)
 Frame = +3

Query: 627  DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806
            DRTKV++RHLPP ++++ L EQVD+ F+GRY+W  FRPGK+S + Q YSRAYI+F+R ED
Sbjct: 6    DRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDFKRSED 65

Query: 807  VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986
            V EF+E F GHVFVNEKGT +K  VEYAPSQRVPK  +KKD REG+I KD +YLEFLE L
Sbjct: 66   VLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLEFLECL 125

Query: 987  AKPTENLPSADIQLERKEAERAASGV-KENCVVTPLMDFVRQKRAAKGGSQRNASSAKLG 1163
             KP ENLPSA+IQLERKEAERA  GV K+  +VTPLMDFVRQKRAAKGGS+R+ S+ KL 
Sbjct: 126  GKPVENLPSAEIQLERKEAERA--GVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLS 183

Query: 1164 RRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPD 1322
            RRAG +S   PS                      S + ASGK+KS Y++VS+ DEQ   D
Sbjct: 184  RRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSD 243

Query: 1323 KTISHSSNV--ELAEE 1364
            K ++ +S++  E++EE
Sbjct: 244  KHVALASSMGTEISEE 259


>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
            gi|548862693|gb|ERN20051.1| hypothetical protein
            AMTR_s00071p00188270 [Amborella trichopoda]
          Length = 599

 Score =  272 bits (696), Expect = 3e-70
 Identities = 160/316 (50%), Positives = 200/316 (63%), Gaps = 11/316 (3%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MKDP  DRTKVVVR LPP L+Q AL E++DSRF+GRY+W  FRPGK S + Q +SR YI+
Sbjct: 1    MKDP-LDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYID 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDV EF+E F GHVFVNEKG+ +KA VEYAPSQRVPK  +KKD REG+IFKD +YL
Sbjct: 60   FKRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFLE LAKP ENLPSA+IQLER+EAERA +  KE+ +VTPLMDFVRQKRAAK G+ R+++
Sbjct: 120  EFLEFLAKPAENLPSAEIQLERREAERAGAS-KESLIVTPLMDFVRQKRAAKSGTLRSSA 178

Query: 1149 SAKLGRRAGANSIVGPSVHXXXXXXXXXXXXXSSRI-------ASGKEKSAYVVVSRPDE 1307
            + K  RR+   S   P  +             S  +        S K+KS Y +V R DE
Sbjct: 179  NGKTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDE 238

Query: 1308 QAEPDKTISHSSNVELAEETAQSSRTA----VDGATMGYGNVETGXXXXXXXXXXXXEPI 1475
            Q  PD + + S+   LA   A    +     V  AT+G G +E+G            E  
Sbjct: 239  QKLPDNSSAVSA---LAGPEALDDESVGVADVTAATVG-GTLESGKKKVLLLKGKDREAS 294

Query: 1476 NAGMGRITDTSMSSNI 1523
             A    +   ++SS I
Sbjct: 295  QASGSVVQQQTVSSPI 310


>gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
            cacao]
          Length = 440

 Score =  271 bits (694), Expect = 5e-70
 Identities = 150/263 (57%), Positives = 187/263 (71%), Gaps = 17/263 (6%)
 Frame = +3

Query: 627  DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806
            DRTKV++RHLPP ++++ L EQVD+ F+GRY+W  FRPGK+S + Q YSRAYI+F+R ED
Sbjct: 6    DRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDFKRSED 65

Query: 807  VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFK-------DSDY 965
            V EF+E F GHVFVNEKGT +K  VEYAPSQRVPK  +KKD REG+I K       D +Y
Sbjct: 66   VLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKVFLDEHLDLEY 125

Query: 966  LEFLEMLAKPTENLPSADIQLERKEAERAASGV-KENCVVTPLMDFVRQKRAAKGGSQRN 1142
            LEFLE L KP ENLPSA+IQLERKEAERA  GV K+  +VTPLMDFVRQKRAAKGGS+R+
Sbjct: 126  LEFLECLGKPVENLPSAEIQLERKEAERA--GVPKDTPIVTPLMDFVRQKRAAKGGSRRS 183

Query: 1143 ASSAKLGRRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRP 1301
             S+ KL RRAG +S   PS                      S + ASGK+KS Y++VS+ 
Sbjct: 184  LSNGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKR 243

Query: 1302 DEQAEPDKTISHSSNV--ELAEE 1364
            DEQ   DK ++ +S++  E++EE
Sbjct: 244  DEQQLSDKHVALASSMGTEISEE 266


>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
            lycopersicum]
          Length = 485

 Score =  268 bits (684), Expect = 7e-69
 Identities = 145/260 (55%), Positives = 179/260 (68%), Gaps = 8/260 (3%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK P  DR+KVV+RHLPP +SQS L +QVDSRFAGRY+WFCF PGK+S + Q YSRAYIE
Sbjct: 1    MKGP-LDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIE 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDV EF+E F GHVFVNEKGT +K  VEYAPSQRVP+  +KKD REG+I KD +YL
Sbjct: 60   FKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFLE ++KP ENLPSA+IQLERKEAERA S  K+  +VTPLMD++RQKRAAK G++++ +
Sbjct: 120  EFLEFISKPIENLPSAEIQLERKEAERAGS-AKDAPIVTPLMDYIRQKRAAKSGARKSIA 178

Query: 1149 SAKLGRRAGANSIVGP-------SVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307
            + +  RRA   S   P       S               SS+  SGK+K+  +   R D+
Sbjct: 179  NGRPTRRASGTSAGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDKTYILAPKRDDQ 238

Query: 1308 Q-AEPDKTISHSSNVELAEE 1364
            Q AE   T +  S     EE
Sbjct: 239  QRAEKSGTSAPGSVANAVEE 258


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  266 bits (681), Expect = 2e-68
 Identities = 140/249 (56%), Positives = 179/249 (71%), Gaps = 7/249 (2%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK P  DRTKVVVRHLPP +S++A  EQ+D+ F GRY    FRPGK S +RQ YSRAY++
Sbjct: 1    MKGP-LDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLD 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDV EF+E F GHVFVNEKGT +K  VEYAPSQR+PK   KKD REG+IFKD +Y+
Sbjct: 60   FKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYM 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EF+E+LAKP ENLPSA+IQLER+EAERA + VK+  +VTPLMDFVRQKRAAKG S+R+ S
Sbjct: 120  EFVELLAKPVENLPSAEIQLERREAERAGA-VKDTPIVTPLMDFVRQKRAAKGVSRRSLS 178

Query: 1149 SAKLGRRAGANSIVGPSV-------HXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307
            + KL RRA  +S   PS+                     +++  S K+KS +++V + D+
Sbjct: 179  NGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDD 238

Query: 1308 QAEPDKTIS 1334
            Q   DK+++
Sbjct: 239  QLLSDKSVN 247


>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
            tuberosum]
          Length = 483

 Score =  265 bits (678), Expect = 3e-68
 Identities = 144/260 (55%), Positives = 177/260 (68%), Gaps = 8/260 (3%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK P  DR+KVV+RHLPP +SQS L +QVDSRFAGRY+WFCF PGK+S + Q YSRAYIE
Sbjct: 1    MKGP-LDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIE 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+ PEDV EF+E F GHVFVNEKGT +K  VEYAPSQRVPK  +KKD REG+I KD +YL
Sbjct: 60   FKMPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFLE ++KP ENLPSA+IQLERKEAERA S  K+  +VTPLMD++RQKRAAK G++++ +
Sbjct: 120  EFLEFISKPIENLPSAEIQLERKEAERAGS-AKDAPIVTPLMDYIRQKRAAKSGARKSIA 178

Query: 1149 SAKLGRRAGANSIVGP-------SVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307
            + +  RR    S   P       S               SS+  SGK+K+  +   R D+
Sbjct: 179  NGRPTRRTSGTSTGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDKTYILAPKRDDQ 238

Query: 1308 Q-AEPDKTISHSSNVELAEE 1364
            Q AE   T +  S     EE
Sbjct: 239  QRAEKSGTSAAGSVANAVEE 258


>gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
          Length = 485

 Score =  265 bits (677), Expect = 4e-68
 Identities = 140/265 (52%), Positives = 183/265 (69%), Gaps = 10/265 (3%)
 Frame = +3

Query: 627  DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806
            DRTKVV+RHLPP +SQ++L EQ+D  F+GRY+W  FRPGK S +   YSRAYI+ +RPED
Sbjct: 7    DRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDLKRPED 66

Query: 807  VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986
            V EF+E F GH+FVNEKG+ +K  VEYAPSQRVPK  +KKD REG+IF+D +YLEFLE L
Sbjct: 67   VIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLEFLEFL 126

Query: 987  AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166
            AKP ENLPSA+IQLER+EAER+ +G K+  +VTPLMDFVRQKRA+K GS+R+ ++ K  R
Sbjct: 127  AKPAENLPSAEIQLERREAERSGAG-KDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSR 185

Query: 1167 RAGANSIVGPSV-------HXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPDK 1325
            RAG  S   PS+                     + +  S K+KS Y++V + D+Q   +K
Sbjct: 186  RAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEK 245

Query: 1326 TISHSSNV---ELAEETAQSSRTAV 1391
            +++ +S      L EE+  S   AV
Sbjct: 246  SVTLASAAGTHVLEEESGVSGADAV 270


>gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
          Length = 482

 Score =  265 bits (677), Expect = 4e-68
 Identities = 140/265 (52%), Positives = 183/265 (69%), Gaps = 10/265 (3%)
 Frame = +3

Query: 627  DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806
            DRTKVV+RHLPP +SQ++L EQ+D  F+GRY+W  FRPGK S +   YSRAYI+ +RPED
Sbjct: 7    DRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDLKRPED 66

Query: 807  VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986
            V EF+E F GH+FVNEKG+ +K  VEYAPSQRVPK  +KKD REG+IF+D +YLEFLE L
Sbjct: 67   VIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLEFLEFL 126

Query: 987  AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166
            AKP ENLPSA+IQLER+EAER+ +G K+  +VTPLMDFVRQKRA+K GS+R+ ++ K  R
Sbjct: 127  AKPAENLPSAEIQLERREAERSGAG-KDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSR 185

Query: 1167 RAGANSIVGPSV-------HXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPDK 1325
            RAG  S   PS+                     + +  S K+KS Y++V + D+Q   +K
Sbjct: 186  RAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEK 245

Query: 1326 TISHSSNV---ELAEETAQSSRTAV 1391
            +++ +S      L EE+  S   AV
Sbjct: 246  SVTLASAAGTHVLEEESGVSGADAV 270


>gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus persica]
          Length = 467

 Score =  261 bits (668), Expect = 5e-67
 Identities = 138/244 (56%), Positives = 175/244 (71%), Gaps = 2/244 (0%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MKDP   RTKV+VRHLPP LS S L +Q+D + A RY+WFCFRPGK S + Q YSRAYI+
Sbjct: 1    MKDPLV-RTKVLVRHLPPSLSHSDLLQQIDHQLADRYNWFCFRPGKNSQKNQRYSRAYID 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDVFEF+E F GHVFVNEKG+ +KA VEYAPSQRVPK   KKD REG+I+KD DYL
Sbjct: 60   FKRPEDVFEFAEFFDGHVFVNEKGSQFKAIVEYAPSQRVPKPCTKKDGREGTIYKDPDYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFL+++AKP E+LPSA+IQLERKEAE+ A G KE  ++TPLM++VRQKRA   G+Q ++ 
Sbjct: 120  EFLKLIAKPVEHLPSAEIQLERKEAEQ-AGGAKEPPIITPLMEYVRQKRAIGSGTQVSSV 178

Query: 1149 SAKLGRRAGANSI--VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPD 1322
              K+ RRAGA S+   G +               S++  S K+KS + VV R ++Q    
Sbjct: 179  VRKVRRRAGAASLNKRGSTSTKRVSEKKKYILKDSAKHTSRKDKSTFTVVPRREDQLASS 238

Query: 1323 KTIS 1334
             ++S
Sbjct: 239  SSVS 242


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  259 bits (663), Expect = 2e-66
 Identities = 136/252 (53%), Positives = 173/252 (68%), Gaps = 6/252 (2%)
 Frame = +3

Query: 627  DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806
            D+TKVVVRHLPPG+SQ    EQ+D  F+GRY+W  +RPG  S + Q YSRAYI+F+RPED
Sbjct: 8    DKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPED 67

Query: 807  VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986
            V +F+E F GH+FVNEKGT +KA VEY+PSQRVPK  +KKD REG+I KD +YLEFLE++
Sbjct: 68   VIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELI 127

Query: 987  AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166
            AKP ENLPSA+IQLER+EAERA +  K+  +VTPLMDFVRQKR AK G +R  S+ KL R
Sbjct: 128  AKPVENLPSAEIQLERREAERAGA-AKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSR 186

Query: 1167 RAG-----ANSIVGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYV-VVSRPDEQAEPDKT 1328
            RAG     ++S +                  +++  SGK+KS YV V  R D+Q     T
Sbjct: 187  RAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVT 246

Query: 1329 ISHSSNVELAEE 1364
            +   S   + E+
Sbjct: 247  LGSGSGTAVLED 258


>ref|XP_002328787.1| predicted protein [Populus trichocarpa]
            gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family
            protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1|
            Smg-4/UPF3 family protein [Populus trichocarpa]
          Length = 527

 Score =  259 bits (663), Expect = 2e-66
 Identities = 136/252 (53%), Positives = 173/252 (68%), Gaps = 6/252 (2%)
 Frame = +3

Query: 627  DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806
            D+TKVVVRHLPPG+SQ    EQ+D  F+GRY+W  +RPG  S + Q YSRAYI+F+RPED
Sbjct: 8    DKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPED 67

Query: 807  VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986
            V +F+E F GH+FVNEKGT +KA VEY+PSQRVPK  +KKD REG+I KD +YLEFLE++
Sbjct: 68   VIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELI 127

Query: 987  AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166
            AKP ENLPSA+IQLER+EAERA +  K+  +VTPLMDFVRQKR AK G +R  S+ KL R
Sbjct: 128  AKPVENLPSAEIQLERREAERAGA-AKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSR 186

Query: 1167 RAG-----ANSIVGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYV-VVSRPDEQAEPDKT 1328
            RAG     ++S +                  +++  SGK+KS YV V  R D+Q     T
Sbjct: 187  RAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVT 246

Query: 1329 ISHSSNVELAEE 1364
            +   S   + E+
Sbjct: 247  LGSGSGTAVLED 258


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  257 bits (657), Expect = 9e-66
 Identities = 137/252 (54%), Positives = 175/252 (69%), Gaps = 7/252 (2%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK P  DRTKVVVR+LPP ++Q A  EQ+D  F GRY+W  FR GKTS + Q  +RAY++
Sbjct: 1    MKGP-LDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLD 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F++PEDV EF+E F GHVFVNEKG  +K  VEYAPSQRVPK  +KKD REG++ KD +YL
Sbjct: 60   FKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFLE ++KP ENLPSA+IQLER+EAERA +  KE  +VTPLMDFVRQKRAAK G +R  S
Sbjct: 120  EFLEFISKPVENLPSAEIQLERREAERAGA-AKEALIVTPLMDFVRQKRAAKAGPRRLLS 178

Query: 1149 SAKLGRRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307
            + KL RRA  +S   P+                      +++ +SGK+KS Y++V + D+
Sbjct: 179  NGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238

Query: 1308 QAEPDKTISHSS 1343
            Q + DK +S SS
Sbjct: 239  Q-DFDKPVSSSS 249


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
            gi|557533707|gb|ESR44825.1| hypothetical protein
            CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  257 bits (657), Expect = 9e-66
 Identities = 137/252 (54%), Positives = 175/252 (69%), Gaps = 7/252 (2%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK P  DRTKVVVR+LPP ++Q A  EQ+D  F GRY+W  FR GKTS + Q  +RAY++
Sbjct: 1    MKGP-LDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLD 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F++PEDV EF+E F GHVFVNEKG  +K  VEYAPSQRVPK  +KKD REG++ KD +YL
Sbjct: 60   FKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFLE ++KP ENLPSA+IQLER+EAERA +  KE  +VTPLMDFVRQKRAAK G +R  S
Sbjct: 120  EFLEFISKPVENLPSAEIQLERREAERAGA-AKEALIVTPLMDFVRQKRAAKAGPRRLLS 178

Query: 1149 SAKLGRRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307
            + KL RRA  +S   P+                      +++ +SGK+KS Y++V + D+
Sbjct: 179  NGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238

Query: 1308 QAEPDKTISHSS 1343
            Q + DK +S SS
Sbjct: 239  Q-DFDKPVSSSS 249


>ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296641 [Fragaria vesca
            subsp. vesca]
          Length = 515

 Score =  256 bits (655), Expect = 2e-65
 Identities = 134/236 (56%), Positives = 171/236 (72%), Gaps = 2/236 (0%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MKDP   RTKV+VRHLPP LSQS   +Q+D  F  R++WFCFRPGK SH+ Q YSRAYIE
Sbjct: 1    MKDPLV-RTKVLVRHLPPSLSQSDFFQQIDHLFGDRHNWFCFRPGKNSHKHQRYSRAYIE 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDVFEF+E F GHVFVNEKGT +K+ VEYAPSQRVPK  NKKD REG+I+KD DYL
Sbjct: 60   FKRPEDVFEFAEFFDGHVFVNEKGTQFKSIVEYAPSQRVPKPSNKKDGREGTIYKDPDYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFL+++AKP E+LPSA+IQLERKEAE+A +  KE  +VTPLM+++RQKRA   G+Q ++ 
Sbjct: 120  EFLKLIAKPAEHLPSAEIQLERKEAEQAGA-AKEAPIVTPLMEYIRQKRAVGSGTQISSV 178

Query: 1149 SAKLGRRAGANSIV--GPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQ 1310
              K+ RR GA S    G +               +++  S K++S + V+ R ++Q
Sbjct: 179  VRKVRRRTGAASFSKRGSTSTKRVSEKKKYILKDTAKYTSRKDRSTFNVLPRREDQ 234


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
            gi|550312328|gb|ERP48419.1| hypothetical protein
            POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score =  255 bits (651), Expect = 5e-65
 Identities = 141/271 (52%), Positives = 175/271 (64%), Gaps = 6/271 (2%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK    D+TKVVVRHLPPG+SQ    EQ+D  F+GRY+W  +RPGK+S + Q  SRAYI+
Sbjct: 1    MKVGQSDKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSYRPGKSSQKHQSCSRAYID 60

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RP+DV +F+E F GH+FVNEKGT +KA VEYAPSQ VPK  +KKD REG+I KD +YL
Sbjct: 61   FKRPDDVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYL 120

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFLE +AKP ENLPSA+IQLER+EAERA    K+  +VTPLM+F+RQKRAAK G +R  S
Sbjct: 121  EFLEFIAKPVENLPSAEIQLERREAERAGV-AKDAPIVTPLMEFIRQKRAAKSGPRRILS 179

Query: 1149 SAKLGRRAGANSIVGPS-----VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSR-PDEQ 1310
            + K  RRAG +     S                    + +  SGKEKS Y  V +  D Q
Sbjct: 180  NGKPSRRAGGSGSPSSSSSKRGSEKKRASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQ 239

Query: 1311 AEPDKTISHSSNVELAEETAQSSRTAVDGAT 1403
                 T+   S  E++EE      TAV G T
Sbjct: 240  LSKAVTLGSGSGTEVSEE-----ETAVSGIT 265


>gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis]
          Length = 533

 Score =  254 bits (650), Expect = 6e-65
 Identities = 148/308 (48%), Positives = 194/308 (62%), Gaps = 4/308 (1%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MKDP   RTK VVR LPP LSQS L +Q+D RF+GRY WFCFRPGK S + Q YSRAYI+
Sbjct: 1    MKDP-LSRTKAVVRRLPPSLSQSDLFQQIDDRFSGRYHWFCFRPGKNSQKHQRYSRAYID 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F R EDV EF+E F GHVFVNEKG  YK  VEYAPSQRVPK+  +KD R+G+I+KD DYL
Sbjct: 60   FNRAEDVLEFAEFFDGHVFVNEKGVQYKTVVEYAPSQRVPKLSTRKDGRDGTIYKDPDYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFL+++AKP E+LPSA+IQLERKEAE+A +  KE  +VTPLM++VRQKR+ + G+Q +  
Sbjct: 120  EFLKLIAKPVEHLPSAEIQLERKEAEQAGA-PKEAPIVTPLMEYVRQKRSIETGAQGSLV 178

Query: 1149 SAKLGRRAGANSI--VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPD 1322
              K+ RR+GA S    G S                ++  S K+KS + VV R ++Q    
Sbjct: 179  VRKISRRSGAGSTRKPGSSSAKRASEKKKYILKEKTKNTSRKDKSTFTVVPRREDQ---- 234

Query: 1323 KTISHSSNVELAEETAQSSRTAVDGATMGYGNV-ETGXXXXXXXXXXXXE-PINAGMGRI 1496
              ++ S+  E  E    S   A++G+  G   + ++G            E P+  GM + 
Sbjct: 235  --LATSTGKETHETEIVS---AIEGSVSGIPVIADSGKKKFLLLKGKRPETPVPTGMLQQ 289

Query: 1497 TDTSMSSN 1520
             DTS  ++
Sbjct: 290  QDTSFGNS 297


>gb|EOY26875.1| Smg-4/UPF3 family protein, putative isoform 6 [Theobroma cacao]
          Length = 450

 Score =  254 bits (650), Expect = 6e-65
 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK+P + RTKVV+RHLPP ++QS L  Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI 
Sbjct: 1    MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK   KKD REG+IFKD DYL
Sbjct: 60   FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFL+++AKP +NLPSA+IQLERKE E  +   KE  V+TPLM FVRQKRAA+ G+Q   +
Sbjct: 120  EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178

Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319
              K+GR+AGA S     S               S +    K+KS + V S+ ++Q  P
Sbjct: 179  RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236


>gb|EOY26874.1| Smg-4/UPF3 family protein, putative isoform 5 [Theobroma cacao]
          Length = 492

 Score =  254 bits (650), Expect = 6e-65
 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK+P + RTKVV+RHLPP ++QS L  Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI 
Sbjct: 1    MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK   KKD REG+IFKD DYL
Sbjct: 60   FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFL+++AKP +NLPSA+IQLERKE E  +   KE  V+TPLM FVRQKRAA+ G+Q   +
Sbjct: 120  EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178

Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319
              K+GR+AGA S     S               S +    K+KS + V S+ ++Q  P
Sbjct: 179  RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236


>gb|EOY26871.1| Smg-4/UPF3 family protein, putative isoform 2 [Theobroma cacao]
          Length = 487

 Score =  254 bits (650), Expect = 6e-65
 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK+P + RTKVV+RHLPP ++QS L  Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI 
Sbjct: 1    MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK   KKD REG+IFKD DYL
Sbjct: 60   FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFL+++AKP +NLPSA+IQLERKE E  +   KE  V+TPLM FVRQKRAA+ G+Q   +
Sbjct: 120  EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178

Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319
              K+GR+AGA S     S               S +    K+KS + V S+ ++Q  P
Sbjct: 179  RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236


>gb|EOY26870.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
            gi|508779616|gb|EOY26872.1| Smg-4/UPF3 family protein,
            putative isoform 1 [Theobroma cacao]
            gi|508779617|gb|EOY26873.1| Smg-4/UPF3 family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 523

 Score =  254 bits (650), Expect = 6e-65
 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%)
 Frame = +3

Query: 609  MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788
            MK+P + RTKVV+RHLPP ++QS L  Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI 
Sbjct: 1    MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59

Query: 789  FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968
            F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK   KKD REG+IFKD DYL
Sbjct: 60   FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119

Query: 969  EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148
            EFL+++AKP +NLPSA+IQLERKE E  +   KE  V+TPLM FVRQKRAA+ G+Q   +
Sbjct: 120  EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178

Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319
              K+GR+AGA S     S               S +    K+KS + V S+ ++Q  P
Sbjct: 179  RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236


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