BLASTX nr result
ID: Ephedra25_contig00002418
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra25_contig00002418 (1675 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 278 4e-72 ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A... 272 3e-70 gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, pa... 271 5e-70 ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264... 268 7e-69 emb|CBI29694.3| unnamed protein product [Vitis vinifera] 266 2e-68 ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts... 265 3e-68 gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 265 4e-68 gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus pe... 265 4e-68 gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus pe... 261 5e-67 ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu... 259 2e-66 ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|5... 259 2e-66 ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 257 9e-66 ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 257 9e-66 ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296... 256 2e-65 ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu... 255 5e-65 gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis] 254 6e-65 gb|EOY26875.1| Smg-4/UPF3 family protein, putative isoform 6 [Th... 254 6e-65 gb|EOY26874.1| Smg-4/UPF3 family protein, putative isoform 5 [Th... 254 6e-65 gb|EOY26871.1| Smg-4/UPF3 family protein, putative isoform 2 [Th... 254 6e-65 gb|EOY26870.1| Smg-4/UPF3 family protein, putative isoform 1 [Th... 254 6e-65 >gb|EOX97031.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao] Length = 514 Score = 278 bits (712), Expect = 4e-72 Identities = 150/256 (58%), Positives = 187/256 (73%), Gaps = 10/256 (3%) Frame = +3 Query: 627 DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806 DRTKV++RHLPP ++++ L EQVD+ F+GRY+W FRPGK+S + Q YSRAYI+F+R ED Sbjct: 6 DRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDFKRSED 65 Query: 807 VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986 V EF+E F GHVFVNEKGT +K VEYAPSQRVPK +KKD REG+I KD +YLEFLE L Sbjct: 66 VLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLEFLECL 125 Query: 987 AKPTENLPSADIQLERKEAERAASGV-KENCVVTPLMDFVRQKRAAKGGSQRNASSAKLG 1163 KP ENLPSA+IQLERKEAERA GV K+ +VTPLMDFVRQKRAAKGGS+R+ S+ KL Sbjct: 126 GKPVENLPSAEIQLERKEAERA--GVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNGKLS 183 Query: 1164 RRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPD 1322 RRAG +S PS S + ASGK+KS Y++VS+ DEQ D Sbjct: 184 RRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQLSD 243 Query: 1323 KTISHSSNV--ELAEE 1364 K ++ +S++ E++EE Sbjct: 244 KHVALASSMGTEISEE 259 >ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda] gi|548862693|gb|ERN20051.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda] Length = 599 Score = 272 bits (696), Expect = 3e-70 Identities = 160/316 (50%), Positives = 200/316 (63%), Gaps = 11/316 (3%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MKDP DRTKVVVR LPP L+Q AL E++DSRF+GRY+W FRPGK S + Q +SR YI+ Sbjct: 1 MKDP-LDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYID 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDV EF+E F GHVFVNEKG+ +KA VEYAPSQRVPK +KKD REG+IFKD +YL Sbjct: 60 FKRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFLE LAKP ENLPSA+IQLER+EAERA + KE+ +VTPLMDFVRQKRAAK G+ R+++ Sbjct: 120 EFLEFLAKPAENLPSAEIQLERREAERAGAS-KESLIVTPLMDFVRQKRAAKSGTLRSSA 178 Query: 1149 SAKLGRRAGANSIVGPSVHXXXXXXXXXXXXXSSRI-------ASGKEKSAYVVVSRPDE 1307 + K RR+ S P + S + S K+KS Y +V R DE Sbjct: 179 NGKTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDE 238 Query: 1308 QAEPDKTISHSSNVELAEETAQSSRTA----VDGATMGYGNVETGXXXXXXXXXXXXEPI 1475 Q PD + + S+ LA A + V AT+G G +E+G E Sbjct: 239 QKLPDNSSAVSA---LAGPEALDDESVGVADVTAATVG-GTLESGKKKVLLLKGKDREAS 294 Query: 1476 NAGMGRITDTSMSSNI 1523 A + ++SS I Sbjct: 295 QASGSVVQQQTVSSPI 310 >gb|EOX97032.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma cacao] Length = 440 Score = 271 bits (694), Expect = 5e-70 Identities = 150/263 (57%), Positives = 187/263 (71%), Gaps = 17/263 (6%) Frame = +3 Query: 627 DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806 DRTKV++RHLPP ++++ L EQVD+ F+GRY+W FRPGK+S + Q YSRAYI+F+R ED Sbjct: 6 DRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDFKRSED 65 Query: 807 VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFK-------DSDY 965 V EF+E F GHVFVNEKGT +K VEYAPSQRVPK +KKD REG+I K D +Y Sbjct: 66 VLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKVFLDEHLDLEY 125 Query: 966 LEFLEMLAKPTENLPSADIQLERKEAERAASGV-KENCVVTPLMDFVRQKRAAKGGSQRN 1142 LEFLE L KP ENLPSA+IQLERKEAERA GV K+ +VTPLMDFVRQKRAAKGGS+R+ Sbjct: 126 LEFLECLGKPVENLPSAEIQLERKEAERA--GVPKDTPIVTPLMDFVRQKRAAKGGSRRS 183 Query: 1143 ASSAKLGRRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRP 1301 S+ KL RRAG +S PS S + ASGK+KS Y++VS+ Sbjct: 184 LSNGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKR 243 Query: 1302 DEQAEPDKTISHSSNV--ELAEE 1364 DEQ DK ++ +S++ E++EE Sbjct: 244 DEQQLSDKHVALASSMGTEISEE 266 >ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum lycopersicum] Length = 485 Score = 268 bits (684), Expect = 7e-69 Identities = 145/260 (55%), Positives = 179/260 (68%), Gaps = 8/260 (3%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK P DR+KVV+RHLPP +SQS L +QVDSRFAGRY+WFCF PGK+S + Q YSRAYIE Sbjct: 1 MKGP-LDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIE 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDV EF+E F GHVFVNEKGT +K VEYAPSQRVP+ +KKD REG+I KD +YL Sbjct: 60 FKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFLE ++KP ENLPSA+IQLERKEAERA S K+ +VTPLMD++RQKRAAK G++++ + Sbjct: 120 EFLEFISKPIENLPSAEIQLERKEAERAGS-AKDAPIVTPLMDYIRQKRAAKSGARKSIA 178 Query: 1149 SAKLGRRAGANSIVGP-------SVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307 + + RRA S P S SS+ SGK+K+ + R D+ Sbjct: 179 NGRPTRRASGTSAGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDKTYILAPKRDDQ 238 Query: 1308 Q-AEPDKTISHSSNVELAEE 1364 Q AE T + S EE Sbjct: 239 QRAEKSGTSAPGSVANAVEE 258 >emb|CBI29694.3| unnamed protein product [Vitis vinifera] Length = 519 Score = 266 bits (681), Expect = 2e-68 Identities = 140/249 (56%), Positives = 179/249 (71%), Gaps = 7/249 (2%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK P DRTKVVVRHLPP +S++A EQ+D+ F GRY FRPGK S +RQ YSRAY++ Sbjct: 1 MKGP-LDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLD 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDV EF+E F GHVFVNEKGT +K VEYAPSQR+PK KKD REG+IFKD +Y+ Sbjct: 60 FKRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYM 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EF+E+LAKP ENLPSA+IQLER+EAERA + VK+ +VTPLMDFVRQKRAAKG S+R+ S Sbjct: 120 EFVELLAKPVENLPSAEIQLERREAERAGA-VKDTPIVTPLMDFVRQKRAAKGVSRRSLS 178 Query: 1149 SAKLGRRAGANSIVGPSV-------HXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307 + KL RRA +S PS+ +++ S K+KS +++V + D+ Sbjct: 179 NGKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDD 238 Query: 1308 QAEPDKTIS 1334 Q DK+++ Sbjct: 239 QLLSDKSVN 247 >ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum tuberosum] Length = 483 Score = 265 bits (678), Expect = 3e-68 Identities = 144/260 (55%), Positives = 177/260 (68%), Gaps = 8/260 (3%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK P DR+KVV+RHLPP +SQS L +QVDSRFAGRY+WFCF PGK+S + Q YSRAYIE Sbjct: 1 MKGP-LDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIE 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+ PEDV EF+E F GHVFVNEKGT +K VEYAPSQRVPK +KKD REG+I KD +YL Sbjct: 60 FKMPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFLE ++KP ENLPSA+IQLERKEAERA S K+ +VTPLMD++RQKRAAK G++++ + Sbjct: 120 EFLEFISKPIENLPSAEIQLERKEAERAGS-AKDAPIVTPLMDYIRQKRAAKSGARKSIA 178 Query: 1149 SAKLGRRAGANSIVGP-------SVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307 + + RR S P S SS+ SGK+K+ + R D+ Sbjct: 179 NGRPTRRTSGTSTGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDKTYILAPKRDDQ 238 Query: 1308 Q-AEPDKTISHSSNVELAEE 1364 Q AE T + S EE Sbjct: 239 QRAEKSGTSAAGSVANAVEE 258 >gb|EMJ23015.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica] Length = 485 Score = 265 bits (677), Expect = 4e-68 Identities = 140/265 (52%), Positives = 183/265 (69%), Gaps = 10/265 (3%) Frame = +3 Query: 627 DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806 DRTKVV+RHLPP +SQ++L EQ+D F+GRY+W FRPGK S + YSRAYI+ +RPED Sbjct: 7 DRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDLKRPED 66 Query: 807 VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986 V EF+E F GH+FVNEKG+ +K VEYAPSQRVPK +KKD REG+IF+D +YLEFLE L Sbjct: 67 VIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLEFLEFL 126 Query: 987 AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166 AKP ENLPSA+IQLER+EAER+ +G K+ +VTPLMDFVRQKRA+K GS+R+ ++ K R Sbjct: 127 AKPAENLPSAEIQLERREAERSGAG-KDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSR 185 Query: 1167 RAGANSIVGPSV-------HXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPDK 1325 RAG S PS+ + + S K+KS Y++V + D+Q +K Sbjct: 186 RAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEK 245 Query: 1326 TISHSSNV---ELAEETAQSSRTAV 1391 +++ +S L EE+ S AV Sbjct: 246 SVTLASAAGTHVLEEESGVSGADAV 270 >gb|EMJ23014.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica] Length = 482 Score = 265 bits (677), Expect = 4e-68 Identities = 140/265 (52%), Positives = 183/265 (69%), Gaps = 10/265 (3%) Frame = +3 Query: 627 DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806 DRTKVV+RHLPP +SQ++L EQ+D F+GRY+W FRPGK S + YSRAYI+ +RPED Sbjct: 7 DRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDLKRPED 66 Query: 807 VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986 V EF+E F GH+FVNEKG+ +K VEYAPSQRVPK +KKD REG+IF+D +YLEFLE L Sbjct: 67 VIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLEFLEFL 126 Query: 987 AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166 AKP ENLPSA+IQLER+EAER+ +G K+ +VTPLMDFVRQKRA+K GS+R+ ++ K R Sbjct: 127 AKPAENLPSAEIQLERREAERSGAG-KDAPIVTPLMDFVRQKRASKAGSRRSLTNGKTSR 185 Query: 1167 RAGANSIVGPSV-------HXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPDK 1325 RAG S PS+ + + S K+KS Y++V + D+Q +K Sbjct: 186 RAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQPSEK 245 Query: 1326 TISHSSNV---ELAEETAQSSRTAV 1391 +++ +S L EE+ S AV Sbjct: 246 SVTLASAAGTHVLEEESGVSGADAV 270 >gb|EMJ27362.1| hypothetical protein PRUPE_ppa015218mg [Prunus persica] Length = 467 Score = 261 bits (668), Expect = 5e-67 Identities = 138/244 (56%), Positives = 175/244 (71%), Gaps = 2/244 (0%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MKDP RTKV+VRHLPP LS S L +Q+D + A RY+WFCFRPGK S + Q YSRAYI+ Sbjct: 1 MKDPLV-RTKVLVRHLPPSLSHSDLLQQIDHQLADRYNWFCFRPGKNSQKNQRYSRAYID 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDVFEF+E F GHVFVNEKG+ +KA VEYAPSQRVPK KKD REG+I+KD DYL Sbjct: 60 FKRPEDVFEFAEFFDGHVFVNEKGSQFKAIVEYAPSQRVPKPCTKKDGREGTIYKDPDYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFL+++AKP E+LPSA+IQLERKEAE+ A G KE ++TPLM++VRQKRA G+Q ++ Sbjct: 120 EFLKLIAKPVEHLPSAEIQLERKEAEQ-AGGAKEPPIITPLMEYVRQKRAIGSGTQVSSV 178 Query: 1149 SAKLGRRAGANSI--VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPD 1322 K+ RRAGA S+ G + S++ S K+KS + VV R ++Q Sbjct: 179 VRKVRRRAGAASLNKRGSTSTKRVSEKKKYILKDSAKHTSRKDKSTFTVVPRREDQLASS 238 Query: 1323 KTIS 1334 ++S Sbjct: 239 SSVS 242 >ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa] gi|550341819|gb|ERP62848.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa] Length = 520 Score = 259 bits (663), Expect = 2e-66 Identities = 136/252 (53%), Positives = 173/252 (68%), Gaps = 6/252 (2%) Frame = +3 Query: 627 DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806 D+TKVVVRHLPPG+SQ EQ+D F+GRY+W +RPG S + Q YSRAYI+F+RPED Sbjct: 8 DKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPED 67 Query: 807 VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986 V +F+E F GH+FVNEKGT +KA VEY+PSQRVPK +KKD REG+I KD +YLEFLE++ Sbjct: 68 VIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELI 127 Query: 987 AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166 AKP ENLPSA+IQLER+EAERA + K+ +VTPLMDFVRQKR AK G +R S+ KL R Sbjct: 128 AKPVENLPSAEIQLERREAERAGA-AKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSR 186 Query: 1167 RAG-----ANSIVGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYV-VVSRPDEQAEPDKT 1328 RAG ++S + +++ SGK+KS YV V R D+Q T Sbjct: 187 RAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVT 246 Query: 1329 ISHSSNVELAEE 1364 + S + E+ Sbjct: 247 LGSGSGTAVLED 258 >ref|XP_002328787.1| predicted protein [Populus trichocarpa] gi|566168252|ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocarpa] gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein [Populus trichocarpa] Length = 527 Score = 259 bits (663), Expect = 2e-66 Identities = 136/252 (53%), Positives = 173/252 (68%), Gaps = 6/252 (2%) Frame = +3 Query: 627 DRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIEFRRPED 806 D+TKVVVRHLPPG+SQ EQ+D F+GRY+W +RPG S + Q YSRAYI+F+RPED Sbjct: 8 DKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPED 67 Query: 807 VFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYLEFLEML 986 V +F+E F GH+FVNEKGT +KA VEY+PSQRVPK +KKD REG+I KD +YLEFLE++ Sbjct: 68 VIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLELI 127 Query: 987 AKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNASSAKLGR 1166 AKP ENLPSA+IQLER+EAERA + K+ +VTPLMDFVRQKR AK G +R S+ KL R Sbjct: 128 AKPVENLPSAEIQLERREAERAGA-AKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSR 186 Query: 1167 RAG-----ANSIVGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYV-VVSRPDEQAEPDKT 1328 RAG ++S + +++ SGK+KS YV V R D+Q T Sbjct: 187 RAGGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVT 246 Query: 1329 ISHSSNVELAEE 1364 + S + E+ Sbjct: 247 LGSGSGTAVLED 258 >ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus sinensis] Length = 514 Score = 257 bits (657), Expect = 9e-66 Identities = 137/252 (54%), Positives = 175/252 (69%), Gaps = 7/252 (2%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK P DRTKVVVR+LPP ++Q A EQ+D F GRY+W FR GKTS + Q +RAY++ Sbjct: 1 MKGP-LDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLD 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F++PEDV EF+E F GHVFVNEKG +K VEYAPSQRVPK +KKD REG++ KD +YL Sbjct: 60 FKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFLE ++KP ENLPSA+IQLER+EAERA + KE +VTPLMDFVRQKRAAK G +R S Sbjct: 120 EFLEFISKPVENLPSAEIQLERREAERAGA-AKEALIVTPLMDFVRQKRAAKAGPRRLLS 178 Query: 1149 SAKLGRRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307 + KL RRA +S P+ +++ +SGK+KS Y++V + D+ Sbjct: 179 NGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238 Query: 1308 QAEPDKTISHSS 1343 Q + DK +S SS Sbjct: 239 Q-DFDKPVSSSS 249 >ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina] gi|557533707|gb|ESR44825.1| hypothetical protein CICLE_v10000901mg [Citrus clementina] Length = 514 Score = 257 bits (657), Expect = 9e-66 Identities = 137/252 (54%), Positives = 175/252 (69%), Gaps = 7/252 (2%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK P DRTKVVVR+LPP ++Q A EQ+D F GRY+W FR GKTS + Q +RAY++ Sbjct: 1 MKGP-LDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLD 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F++PEDV EF+E F GHVFVNEKG +K VEYAPSQRVPK +KKD REG++ KD +YL Sbjct: 60 FKKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFLE ++KP ENLPSA+IQLER+EAERA + KE +VTPLMDFVRQKRAAK G +R S Sbjct: 120 EFLEFISKPVENLPSAEIQLERREAERAGA-AKEALIVTPLMDFVRQKRAAKAGPRRLLS 178 Query: 1149 SAKLGRRAGANSIVGPS-------VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDE 1307 + KL RRA +S P+ +++ +SGK+KS Y++V + D+ Sbjct: 179 NGKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDD 238 Query: 1308 QAEPDKTISHSS 1343 Q + DK +S SS Sbjct: 239 Q-DFDKPVSSSS 249 >ref|XP_004294505.1| PREDICTED: uncharacterized protein LOC101296641 [Fragaria vesca subsp. vesca] Length = 515 Score = 256 bits (655), Expect = 2e-65 Identities = 134/236 (56%), Positives = 171/236 (72%), Gaps = 2/236 (0%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MKDP RTKV+VRHLPP LSQS +Q+D F R++WFCFRPGK SH+ Q YSRAYIE Sbjct: 1 MKDPLV-RTKVLVRHLPPSLSQSDFFQQIDHLFGDRHNWFCFRPGKNSHKHQRYSRAYIE 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDVFEF+E F GHVFVNEKGT +K+ VEYAPSQRVPK NKKD REG+I+KD DYL Sbjct: 60 FKRPEDVFEFAEFFDGHVFVNEKGTQFKSIVEYAPSQRVPKPSNKKDGREGTIYKDPDYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFL+++AKP E+LPSA+IQLERKEAE+A + KE +VTPLM+++RQKRA G+Q ++ Sbjct: 120 EFLKLIAKPAEHLPSAEIQLERKEAEQAGA-AKEAPIVTPLMEYIRQKRAVGSGTQISSV 178 Query: 1149 SAKLGRRAGANSIV--GPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQ 1310 K+ RR GA S G + +++ S K++S + V+ R ++Q Sbjct: 179 VRKVRRRTGAASFSKRGSTSTKRVSEKKKYILKDTAKYTSRKDRSTFNVLPRREDQ 234 >ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa] gi|550312328|gb|ERP48419.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa] Length = 511 Score = 255 bits (651), Expect = 5e-65 Identities = 141/271 (52%), Positives = 175/271 (64%), Gaps = 6/271 (2%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK D+TKVVVRHLPPG+SQ EQ+D F+GRY+W +RPGK+S + Q SRAYI+ Sbjct: 1 MKVGQSDKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSYRPGKSSQKHQSCSRAYID 60 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RP+DV +F+E F GH+FVNEKGT +KA VEYAPSQ VPK +KKD REG+I KD +YL Sbjct: 61 FKRPDDVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYL 120 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFLE +AKP ENLPSA+IQLER+EAERA K+ +VTPLM+F+RQKRAAK G +R S Sbjct: 121 EFLEFIAKPVENLPSAEIQLERREAERAGV-AKDAPIVTPLMEFIRQKRAAKSGPRRILS 179 Query: 1149 SAKLGRRAGANSIVGPS-----VHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSR-PDEQ 1310 + K RRAG + S + + SGKEKS Y V + D Q Sbjct: 180 NGKPSRRAGGSGSPSSSSSKRGSEKKRASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQ 239 Query: 1311 AEPDKTISHSSNVELAEETAQSSRTAVDGAT 1403 T+ S E++EE TAV G T Sbjct: 240 LSKAVTLGSGSGTEVSEE-----ETAVSGIT 265 >gb|EXB88206.1| hypothetical protein L484_011635 [Morus notabilis] Length = 533 Score = 254 bits (650), Expect = 6e-65 Identities = 148/308 (48%), Positives = 194/308 (62%), Gaps = 4/308 (1%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MKDP RTK VVR LPP LSQS L +Q+D RF+GRY WFCFRPGK S + Q YSRAYI+ Sbjct: 1 MKDP-LSRTKAVVRRLPPSLSQSDLFQQIDDRFSGRYHWFCFRPGKNSQKHQRYSRAYID 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F R EDV EF+E F GHVFVNEKG YK VEYAPSQRVPK+ +KD R+G+I+KD DYL Sbjct: 60 FNRAEDVLEFAEFFDGHVFVNEKGVQYKTVVEYAPSQRVPKLSTRKDGRDGTIYKDPDYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFL+++AKP E+LPSA+IQLERKEAE+A + KE +VTPLM++VRQKR+ + G+Q + Sbjct: 120 EFLKLIAKPVEHLPSAEIQLERKEAEQAGA-PKEAPIVTPLMEYVRQKRSIETGAQGSLV 178 Query: 1149 SAKLGRRAGANSI--VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEPD 1322 K+ RR+GA S G S ++ S K+KS + VV R ++Q Sbjct: 179 VRKISRRSGAGSTRKPGSSSAKRASEKKKYILKEKTKNTSRKDKSTFTVVPRREDQ---- 234 Query: 1323 KTISHSSNVELAEETAQSSRTAVDGATMGYGNV-ETGXXXXXXXXXXXXE-PINAGMGRI 1496 ++ S+ E E S A++G+ G + ++G E P+ GM + Sbjct: 235 --LATSTGKETHETEIVS---AIEGSVSGIPVIADSGKKKFLLLKGKRPETPVPTGMLQQ 289 Query: 1497 TDTSMSSN 1520 DTS ++ Sbjct: 290 QDTSFGNS 297 >gb|EOY26875.1| Smg-4/UPF3 family protein, putative isoform 6 [Theobroma cacao] Length = 450 Score = 254 bits (650), Expect = 6e-65 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK+P + RTKVV+RHLPP ++QS L Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI Sbjct: 1 MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK KKD REG+IFKD DYL Sbjct: 60 FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFL+++AKP +NLPSA+IQLERKE E + KE V+TPLM FVRQKRAA+ G+Q + Sbjct: 120 EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178 Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319 K+GR+AGA S S S + K+KS + V S+ ++Q P Sbjct: 179 RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236 >gb|EOY26874.1| Smg-4/UPF3 family protein, putative isoform 5 [Theobroma cacao] Length = 492 Score = 254 bits (650), Expect = 6e-65 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK+P + RTKVV+RHLPP ++QS L Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI Sbjct: 1 MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK KKD REG+IFKD DYL Sbjct: 60 FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFL+++AKP +NLPSA+IQLERKE E + KE V+TPLM FVRQKRAA+ G+Q + Sbjct: 120 EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178 Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319 K+GR+AGA S S S + K+KS + V S+ ++Q P Sbjct: 179 RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236 >gb|EOY26871.1| Smg-4/UPF3 family protein, putative isoform 2 [Theobroma cacao] Length = 487 Score = 254 bits (650), Expect = 6e-65 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK+P + RTKVV+RHLPP ++QS L Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI Sbjct: 1 MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK KKD REG+IFKD DYL Sbjct: 60 FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFL+++AKP +NLPSA+IQLERKE E + KE V+TPLM FVRQKRAA+ G+Q + Sbjct: 120 EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178 Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319 K+GR+AGA S S S + K+KS + V S+ ++Q P Sbjct: 179 RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236 >gb|EOY26870.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao] gi|508779616|gb|EOY26872.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao] gi|508779617|gb|EOY26873.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao] Length = 523 Score = 254 bits (650), Expect = 6e-65 Identities = 136/238 (57%), Positives = 168/238 (70%), Gaps = 1/238 (0%) Frame = +3 Query: 609 MKDPNKDRTKVVVRHLPPGLSQSALKEQVDSRFAGRYDWFCFRPGKTSHRRQVYSRAYIE 788 MK+P + RTKVV+RHLPP ++QS L Q+D RF+ RY+WF FR GK+SH+ Q YSRAYI Sbjct: 1 MKEPLR-RTKVVIRHLPPSVTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSRAYIN 59 Query: 789 FRRPEDVFEFSEAFGGHVFVNEKGTHYKAQVEYAPSQRVPKILNKKDSREGSIFKDSDYL 968 F+RPEDVFEF+E F GHVFVNEKGT +KA VEYAPSQRVPK KKD REG+IFKD DYL Sbjct: 60 FKRPEDVFEFAEFFDGHVFVNEKGTQFKAIVEYAPSQRVPKPGTKKDGREGTIFKDPDYL 119 Query: 969 EFLEMLAKPTENLPSADIQLERKEAERAASGVKENCVVTPLMDFVRQKRAAKGGSQRNAS 1148 EFL+++AKP +NLPSA+IQLERKE E + KE V+TPLM FVRQKRAA+ G+Q + Sbjct: 120 EFLKLIAKPVDNLPSAEIQLERKEVE-LSGAPKETPVITPLMAFVRQKRAAESGTQGPVT 178 Query: 1149 SAKLGRRAGANSI-VGPSVHXXXXXXXXXXXXXSSRIASGKEKSAYVVVSRPDEQAEP 1319 K+GR+AGA S S S + K+KS + V S+ ++Q P Sbjct: 179 RRKIGRKAGAASTGKSGSSSKRGSEKKKYILKDSVKGTHHKDKSKFFVASKQEDQPVP 236