BLASTX nr result
ID: Ephedra25_contig00002380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00002380
(594 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [A... 148 9e-34
ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495... 120 4e-25
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777... 112 6e-23
ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Caps... 111 2e-22
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911... 108 1e-21
gb|AAM61481.1| unknown [Arabidopsis thaliana] 108 1e-21
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab... 104 2e-20
ref|XP_002330744.1| predicted protein [Populus trichocarpa] 102 8e-20
ref|XP_002327104.1| predicted protein [Populus trichocarpa] gi|5... 102 1e-19
ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Ch... 101 1e-19
ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutr... 97 3e-18
gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis] 97 4e-18
ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like ... 94 4e-17
ref|XP_002510278.1| conserved hypothetical protein [Ricinus comm... 90 4e-16
ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus c... 90 4e-16
ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arab... 90 5e-16
ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutr... 89 9e-16
ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidop... 89 9e-16
ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana] gi|75334520... 89 9e-16
dbj|BAC42861.1| unknown protein [Arabidopsis thaliana] 89 9e-16
>ref|XP_006845708.1| hypothetical protein AMTR_s00019p00240430 [Amborella trichopoda]
gi|548848280|gb|ERN07383.1| hypothetical protein
AMTR_s00019p00240430 [Amborella trichopoda]
Length = 500
Score = 148 bits (374), Expect = 9e-34
Identities = 73/171 (42%), Positives = 101/171 (59%), Gaps = 3/171 (1%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTRVAPMLNNLQDKREN---LWNNFFT 423
KW DNRK K THPDF HK T ++LW++ K ++ + D+R++ LW + F
Sbjct: 313 KWCDNRKVKTQPTHPDFKHKETGEALWLDGPKAEWVLSKLKTLEIDQRQDKGHLWEDLFA 372
Query: 422 DPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDASSASQTTEN 243
DPSKW DNRK+K HPDF HK+T +ALW+D + P WV+S L L+ D ++ + +
Sbjct: 373 DPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLSKLKTLEID-QRQNKDSND 430
Query: 242 LWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIPML 90
LWK A+ +W+D R K K PDF HKD K LW++ TP W + L
Sbjct: 431 LWKDLVANRDKWWDNRLSKVNPKAPDFKHKDSGKGLWLNG-STPDWALTNL 480
Score = 147 bits (372), Expect = 2e-33
Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 15/211 (7%)
Frame = -2
Query: 590 WFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTRVAPMLNNLQ--------DKRENL-- 441
W+DNR K++ +PDF +K++ ++LW+ D TP V L + + K E +
Sbjct: 240 WYDNRFDKRNPRYPDFRNKNSKEALWL-DKHTPDSVLSALESPEFCAKFANGQKIEKIRA 298
Query: 440 -----WNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKN 276
W + F DPSKW DNRK+K HPDF HK+T +ALW+D + WV+S L L+
Sbjct: 299 DIGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPK-AEWVLSKLKTLEI 357
Query: 275 DASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIP 96
D Q +LW+ FA PS+W D RK+K + HPDF HK+ +ALW+D ++ P WV+
Sbjct: 358 D---QRQDKGHLWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGIK-PEWVLS 413
Query: 95 MLNNLQVEAFSAPLSVETLWIAYFSDPSKWF 3
L L+++ S LW ++ KW+
Sbjct: 414 KLKTLEIDQRQNKDS-NDLWKDLVANRDKWW 443
Score = 108 bits (271), Expect = 8e-22
Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 8/156 (5%)
Frame = -2
Query: 449 ENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDA 270
E LW F P W+DNR K++ +PDF +K++ +ALW+D P V+S L+ + A
Sbjct: 227 EGLWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLDK-HTPDSVLSALESPEFCA 285
Query: 269 SSAS-QTTENL-------WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRT 114
A+ Q E + W+ FA PS+W D RK+K + HPDF HK+ +ALW+D +
Sbjct: 286 KFANGQKIEKIRADIGHRWEDLFADPSKWCDNRKVKTQPTHPDFKHKETGEALWLDGPKA 345
Query: 113 PAWVIPMLNNLQVEAFSAPLSVETLWIAYFSDPSKW 6
WV+ L L+++ LW F+DPSKW
Sbjct: 346 -EWVLSKLKTLEIDQRQ---DKGHLWEDLFADPSKW 377
Score = 63.2 bits (152), Expect = 5e-08
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Frame = -2
Query: 275 DASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDD--------- 123
D + E LWK FA P W+D R K+ ++PDF +K+ +ALW+D
Sbjct: 218 DKVQKAVAVEGLWKELFAKPYNWYDNRFDKRNPRYPDFRNKNSKEALWLDKHTPDSVLSA 277
Query: 122 LRTPAWVIPMLNNLQVEAFSAPLSVETLWIAYFSDPSKW 6
L +P + N ++E A + W F+DPSKW
Sbjct: 278 LESPEFCAKFANGQKIEKIRADIGHR--WEDLFADPSKW 314
>ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1|
Protein OSB3 [Medicago truncatula]
Length = 491
Score = 120 bits (300), Expect = 4e-25
Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 24/211 (11%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIE-------------DFKTPTRVAPMLNN 465
KW+D R +K++ + +PDF K + S+W++ +F TP V P
Sbjct: 287 KWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKSVLSRLKELEFDTPP-VKPKQTK 345
Query: 464 LQDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDK 285
K + WN+ +P+KW+DNR KK PDF HKDT LW+ + +P+WV S L +
Sbjct: 346 -DSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SPSWVSSRLKE 402
Query: 284 LKNDASSA-------SQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWID 126
L+ +++S S+ ++ W +P++W+D R KK K PDF HKD +ALW+
Sbjct: 403 LEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDKKNPKGPDFKHKDTGEALWLR 462
Query: 125 DLRTPAWVIPMLNNLQVEAFSAPLSVETLWI 33
+P+WV+P L L+ + SA ET W+
Sbjct: 463 G--SPSWVLPKLPPLKPKQQSA----ETSWM 487
Score = 84.7 bits (208), Expect = 2e-14
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Frame = -2
Query: 440 WNNFFTDPSKWFDNRKIKKSNN----HPDFVHKDTHDALWIDNTRNPTWVISMLDKLKND 273
W + DP KW+D R K++ + +PDF KD + ++W+D V+S L +L+ D
Sbjct: 278 WGDLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWLDKASKS--VLSRLKELEFD 335
Query: 272 A------SSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 111
+ + W +P++W+D R KK + PDF HKD LW+ D +P
Sbjct: 336 TPPVKPKQTKDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRD--SP 393
Query: 110 AWVIPMLNNLQVEAFSA-------PLSVETLWIAYFSDPSKWF 3
+WV L L+VE+ S + W +P+KW+
Sbjct: 394 SWVSSRLKELEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWW 436
>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
protein OSB3 [Arabidopsis thaliana]
Length = 442
Score = 112 bits (281), Expect = 6e-23
Identities = 71/211 (33%), Positives = 99/211 (46%), Gaps = 39/211 (18%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWI-----------EDFKTPTRVAP---MLN 468
+W D+R K + HPDF K SLW+ E+ K V LN
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLN 286
Query: 467 NLQDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLD 288
L+D E W + +P KW DNR K + +PDF HK+T +ALW+ T +P WV+S L
Sbjct: 287 QLKDIGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 344
Query: 287 KLKND------ASSASQ---------------TTENLWKAFFAHPSRWFDKRKIKKRDKH 171
LK + ++ SQ E +WK +PS+W+D R K+ K
Sbjct: 345 PLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKG 404
Query: 170 PDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 78
PDF HK+ +ALWI D +P W + L L+
Sbjct: 405 PDFKHKETGEALWIGD--SPTWALSKLPPLK 433
Score = 87.4 bits (215), Expect = 3e-15
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDF------KTP----TRVAPMLNNL------ 462
KW DNR K + +PDF HK T ++LW+ + K P + P ++N
Sbjct: 305 KWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQLEL 364
Query: 461 ----------QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNP 312
Q KRE +W N +PSKW+DNR K++ PDF HK+T +ALWI + +P
Sbjct: 365 DVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD--SP 422
Query: 311 TWVISMLDKLKND 273
TW +S L LK +
Sbjct: 423 TWALSKLPPLKKN 435
Score = 80.5 bits (197), Expect = 3e-13
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 34/200 (17%)
Frame = -2
Query: 500 KTPTRVAPMLNNLQDKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALW 333
K P R + + + ++ N W + +P +W D+R K + HPDF K +LW
Sbjct: 199 KKPAR-SKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 332 IDNTRNPTWVISMLDKLKNDA---------SSASQTTENLWKAFFAHPSRWFDKRKIKKR 180
+ P W + L++LK D + E WK +P +W D R K
Sbjct: 258 LSTA--PDWALLKLEELKFDVLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNRSDKTN 315
Query: 179 DKHPDFTHKDCNKALWIDDLRTPAWV---IPMLNNLQVEAFSA----------------- 60
K+PDF HK+ +ALW+ + +P WV +P L Q F +
Sbjct: 316 VKYPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNL 373
Query: 59 -PLSVETLWIAYFSDPSKWF 3
L E +W +PSKW+
Sbjct: 374 KQLKREEIWKNLVENPSKWW 393
>ref|XP_006280485.1| hypothetical protein CARUB_v10026422mg [Capsella rubella]
gi|482549189|gb|EOA13383.1| hypothetical protein
CARUB_v10026422mg [Capsella rubella]
Length = 437
Score = 111 bits (277), Expect = 2e-22
Identities = 68/197 (34%), Positives = 92/197 (46%), Gaps = 25/197 (12%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL------------ 462
+WFD+R K + HPDF K+ SLW+ P L+ L
Sbjct: 238 EWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLST--VPDWALLKLDELEFDVFVPNGDIK 295
Query: 461 --QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLD 288
Q K E W + +P KWFDNR K + PDF HK+T +ALW+ T +P WV+S L
Sbjct: 296 LKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEALWM--TDSPIWVLSKLP 353
Query: 287 KLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 129
LK + + E WK PS+W+D R K+ K PDF HK+ +ALWI
Sbjct: 354 PLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWI 413
Query: 128 DDLRTPAWVIPMLNNLQ 78
+P W + L L+
Sbjct: 414 SS--SPTWALSELPPLE 428
Score = 93.2 bits (230), Expect = 5e-17
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 12/119 (10%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDF------KTP----TRVAPMLNNLQD--KR 450
KWFDNR K + PDF HK T ++LW+ D K P + P+++N K+
Sbjct: 314 KWFDNRSEKTNVKAPDFKHKETGEALWMTDSPIWVLSKLPPLKKNQERPLMSNTVSLHKK 373
Query: 449 ENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKND 273
E W N DPSKW+DNR K++ PDF HK+T +ALWI + +PTW +S L L+ +
Sbjct: 374 EESWKNLVEDPSKWWDNRVDKRNPKGPDFKHKETGEALWISS--SPTWALSELPPLEKN 430
Score = 92.0 bits (227), Expect = 1e-16
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Frame = -2
Query: 464 LQDKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPTWVIS 297
+ ++ N W + +P +WFD+R K + HPDF K +LW+ P W +
Sbjct: 221 IDEETSNSWKHLIENPKEWFDHRGNKANGLVKPKHPDFKRKAGGLSLWLSTV--PDWALL 278
Query: 296 MLDKLK-------NDASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 138
LD+L+ D E WK +P +WFD R K K PDF HK+ +A
Sbjct: 279 KLDELEFDVFVPNGDIKLKQLKGEESWKDLVQNPDKWFDNRSEKTNVKAPDFKHKETGEA 338
Query: 137 LWIDDLRTPAWVI----PMLNNLQVEAFSAPLSV---ETLWIAYFSDPSKWF 3
LW+ D +P WV+ P+ N + S +S+ E W DPSKW+
Sbjct: 339 LWMTD--SPIWVLSKLPPLKKNQERPLMSNTVSLHKKEESWKNLVEDPSKWW 388
>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
OSB3, chloroplastic/mitochondrial; AltName:
Full=Organellar single-stranded DNA-binding protein 3;
Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
protein [Arabidopsis thaliana]
gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis
thaliana] gi|30102734|gb|AAP21285.1| At5g44785
[Arabidopsis thaliana] gi|110743279|dbj|BAE99530.1|
hypothetical protein [Arabidopsis thaliana]
gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
thaliana]
Length = 440
Score = 108 bits (269), Expect = 1e-21
Identities = 71/211 (33%), Positives = 98/211 (46%), Gaps = 39/211 (18%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWI-----------EDFKTPTRVAP---MLN 468
+W D+R K + HPDF K SLW+ E+ K V LN
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLN 286
Query: 467 NLQDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLD 288
L K E W + +P KW DNR K + +PDF HK+T +ALW+ T +P WV+S L
Sbjct: 287 QL--KGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 342
Query: 287 KLKND------ASSASQ---------------TTENLWKAFFAHPSRWFDKRKIKKRDKH 171
LK + ++ SQ E +WK +PS+W+D R K+ K
Sbjct: 343 PLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKG 402
Query: 170 PDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 78
PDF HK+ +ALWI D +P W + L L+
Sbjct: 403 PDFKHKETGEALWIGD--SPTWALSKLPPLK 431
Score = 87.4 bits (215), Expect = 3e-15
Identities = 49/133 (36%), Positives = 69/133 (51%), Gaps = 26/133 (19%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDF------KTP----TRVAPMLNNL------ 462
KW DNR K + +PDF HK T ++LW+ + K P + P ++N
Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQLEL 362
Query: 461 ----------QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNP 312
Q KRE +W N +PSKW+DNR K++ PDF HK+T +ALWI + +P
Sbjct: 363 DVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD--SP 420
Query: 311 TWVISMLDKLKND 273
TW +S L LK +
Sbjct: 421 TWALSKLPPLKKN 433
Score = 79.3 bits (194), Expect = 7e-13
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 32/198 (16%)
Frame = -2
Query: 500 KTPTRVAPMLNNLQDKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALW 333
K P R + + + ++ N W + +P +W D+R K + HPDF K +LW
Sbjct: 199 KKPAR-SKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 332 IDNTRNPTWVISMLDKLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDK 174
+ P W + L++LK D E WK +P +W D R K K
Sbjct: 258 LSTA--PDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVK 315
Query: 173 HPDFTHKDCNKALWIDDLRTPAWV---IPMLNNLQVEAFSA------------------P 57
+PDF HK+ +ALW+ + +P WV +P L Q F +
Sbjct: 316 YPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQ 373
Query: 56 LSVETLWIAYFSDPSKWF 3
L E +W +PSKW+
Sbjct: 374 LKREEIWKNLVENPSKWW 391
>gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 108 bits (269), Expect = 1e-21
Identities = 71/211 (33%), Positives = 98/211 (46%), Gaps = 39/211 (18%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWI-----------EDFKTPTRVAP---MLN 468
+W D+R K + HPDF K SLW+ E+ K V LN
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLN 286
Query: 467 NLQDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLD 288
L K E W + +P KW DNR K + +PDF HK+T +ALW+ T +P WV+S L
Sbjct: 287 QL--KGEESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 342
Query: 287 KLKND------ASSASQ---------------TTENLWKAFFAHPSRWFDKRKIKKRDKH 171
LK + ++ SQ E +WK +PS+W+D R K+ K
Sbjct: 343 PLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKG 402
Query: 170 PDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 78
PDF HK+ +ALWI D +P W + L L+
Sbjct: 403 PDFKHKETGEALWIGD--SPTWALSKLPPLK 431
Score = 88.2 bits (217), Expect = 1e-15
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 26/133 (19%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDF------KTP----TRVAPMLNNL------ 462
KW DNR K + +PDF HK T ++LW+ + K P + P+++N
Sbjct: 303 KWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPLMSNKVSQLEL 362
Query: 461 ----------QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNP 312
Q KRE +W N +PSKW+DNR K++ PDF HK+T +ALWI + +P
Sbjct: 363 DVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGD--SP 420
Query: 311 TWVISMLDKLKND 273
TW +S L LK +
Sbjct: 421 TWALSKLPPLKKN 433
Score = 80.1 bits (196), Expect = 4e-13
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 32/198 (16%)
Frame = -2
Query: 500 KTPTRVAPMLNNLQDKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALW 333
K P R + + + ++ N W + +P +W D+R K + HPDF K +LW
Sbjct: 199 KKPAR-SKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 332 IDNTRNPTWVISMLDKLKNDASSASQTT-------ENLWKAFFAHPSRWFDKRKIKKRDK 174
+ P W + L++LK D E WK +P +W D R K K
Sbjct: 258 LSTA--PDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSDKTNVK 315
Query: 173 HPDFTHKDCNKALWIDDLRTPAWVI------------PMLNN------LQVEAFSA---P 57
+PDF HK+ +ALW+ + +P WV+ P+++N L VE
Sbjct: 316 YPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNKVSQLELDVEVPKGNLKQ 373
Query: 56 LSVETLWIAYFSDPSKWF 3
L E +W +PSKW+
Sbjct: 374 LKREEIWKNLVENPSKWW 391
>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 104 bits (260), Expect = 2e-20
Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 39/211 (18%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL------------ 462
+W D+R K + HPDF K SLW+ P P L L
Sbjct: 227 EWLDHRGNKANGLVKPGHPDFKMKVGGLSLWLST--APDWALPKLKELEFDVLVPKGNIK 284
Query: 461 --QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLD 288
Q K E W + +P KW DNR K + +PDF HK+T +ALW+ T +P WV+S L
Sbjct: 285 LNQLKGEESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWM--TNSPIWVLSKLP 342
Query: 287 KLKNDASSASQTT---------------------ENLWKAFFAHPSRWFDKRKIKKRDKH 171
LK + + E WK +PS+W+D R K+ K
Sbjct: 343 PLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKA 402
Query: 170 PDFTHKDCNKALWIDDLRTPAWVIPMLNNLQ 78
PDF HK+ + LWI++ +P W + L L+
Sbjct: 403 PDFKHKETGEVLWINN-NSPTWALSKLPPLK 432
Score = 87.8 bits (216), Expect = 2e-15
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDF------------KTPTR------------ 486
KW DNR K + +PDF HK T ++LW+ + K R
Sbjct: 303 KWLDNRLDKTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPLMSNTVPQLEL 362
Query: 485 --VAPMLNNLQDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNP 312
V P N Q KRE W N +PSKW+DNR K++ PDF HK+T + LWI+N +P
Sbjct: 363 DVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKRNPKAPDFKHKETGEVLWINN-NSP 421
Query: 311 TWVISMLDKLKND 273
TW +S L LK +
Sbjct: 422 TWALSKLPPLKKN 434
Score = 74.3 bits (181), Expect = 2e-11
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 32/198 (16%)
Frame = -2
Query: 500 KTPTRVAPMLNNLQDKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALW 333
K P R + + + ++ N W + +P +W D+R K + HPDF K +LW
Sbjct: 199 KRPVR-SKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 332 IDNTRNPTWVISMLDKL-------KNDASSASQTTENLWKAFFAHPSRWFDKRKIKKRDK 174
+ P W + L +L K + E WK +P +W D R K K
Sbjct: 258 LSTA--PDWALPKLKELEFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRLDKTNVK 315
Query: 173 HPDFTHKDCNKALWIDDLRTPAWVI------------PMLNN----LQVEAF-----SAP 57
+PDF HK+ +ALW+ + +P WV+ P+++N L+++
Sbjct: 316 YPDFKHKETGEALWMTN--SPIWVLSKLPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQ 373
Query: 56 LSVETLWIAYFSDPSKWF 3
L E W +PSKW+
Sbjct: 374 LKREESWKNLVENPSKWW 391
>ref|XP_002330744.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 102 bits (254), Expect = 8e-20
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Frame = -2
Query: 446 NLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPTWVISMLDKLK 279
N W + +P++W+D R K+S HPDF HK+ + ++W+ T P+W+ S L+K+K
Sbjct: 206 NSWTDLLENPNQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWL--TGAPSWIFSGLEKVK 263
Query: 278 NDASSA------SQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLR 117
D +A Q E WK +P +W+D R KK K PDF HK+ + LW+D
Sbjct: 264 FDVKTALPTQTKQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLD--T 321
Query: 116 TPAWVIPML 90
+PAWV+P L
Sbjct: 322 SPAWVLPKL 330
Score = 82.4 bits (202), Expect = 8e-14
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWI-----------EDFKTPTRVAPMLNNLQ 459
+W+D R +K+S HPDF HK+ ++S+W+ E K + A Q
Sbjct: 217 QWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTGAPSWIFSGLEKVKFDVKTALPTQTKQ 276
Query: 458 DKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLK 279
K E W + +P KW+DNR KK+ PDF HK+T + LW+D +P WV+ L K
Sbjct: 277 QKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLDT--SPAWVLPKLPPTK 334
>ref|XP_002327104.1| predicted protein [Populus trichocarpa]
gi|566202259|ref|XP_006375003.1| hypothetical protein
POPTR_0014s03490g [Populus trichocarpa]
gi|550323317|gb|ERP52800.1| hypothetical protein
POPTR_0014s03490g [Populus trichocarpa]
Length = 371
Score = 102 bits (253), Expect = 1e-19
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Frame = -2
Query: 443 LWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDASS 264
LW FF+ P +W+DNRK KK++ PDF HK + DALW+ +P W+ + L L A
Sbjct: 224 LWKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWL-RPDDPLWIKTKLQLLDWKAGE 282
Query: 263 ASQTTEN-----LWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWV 102
+ + LW+ FFA P W+D RK KK PDF HKD +ALW+ P WV
Sbjct: 283 HCEEERHKNHLYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWLSP-NDPPWV 340
Score = 83.6 bits (205), Expect = 4e-14
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 15/117 (12%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL---------QDKREN- 444
+W+DNRK KK+S PDF HK + +LW+ P + L L +++ +N
Sbjct: 234 EWWDNRKFKKNSKLPDFKHKISGDALWLRP-DDPLWIKTKLQLLDWKAGEHCEEERHKNH 292
Query: 443 --LWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWV---ISMLD 288
LW FF P +W+DNRK KK++ PDF HKDT +ALW+ + +P WV I +LD
Sbjct: 293 LYLWQVFFASPHEWWDNRKNKKNSASPDFKHKDTGEALWL-SPNDPPWVKRQIQLLD 348
Score = 61.2 bits (147), Expect = 2e-07
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Frame = -2
Query: 242 LWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI--DDLRTPAWVIPMLNNLQVEA 69
LWKAFF+ P W+D RK KK K PDF HK ALW+ DD P W+ LQ+
Sbjct: 224 LWKAFFSSPHEWWDNRKFKKNSKLPDFKHKISGDALWLRPDD---PLWI---KTKLQLLD 277
Query: 68 FSAPLSVET--------LWIAYFSDPSKWF 3
+ A E LW +F+ P +W+
Sbjct: 278 WKAGEHCEEERHKNHLYLWQVFFASPHEWW 307
>ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii] gi|37545634|gb|AAM76787.1| RNA-binding
protein RB38 [Chlamydomonas reinhardtii]
gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein
[Chlamydomonas reinhardtii] gi|158270704|gb|EDO96540.1|
chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii]
Length = 382
Score = 101 bits (252), Expect = 1e-19
Identities = 73/277 (26%), Positives = 111/277 (40%), Gaps = 80/277 (28%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHK-SLWIEDFKTPTRVAPMLNNLQDKRENL-------- 441
+W+DNR K + PDFV K +LWI+ PT V +L++L ++ N
Sbjct: 56 EWYDNRTRKTNPKAPDFVRKDDRAVALWIDGRDVPTWVEELLHDLDSRQVNRRQQRDSES 115
Query: 440 -------------------------WNNFFTDPSKWFDNRKIKKSNNHPDFVHK-DTHDA 339
W ++P +W+DNR K S+ PDFV + D + A
Sbjct: 116 GDERGGRGERRSGPGGGRQAAEAANWEALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSA 175
Query: 338 LWIDNTRNPTWVISMLDKL----------------------KNDASSASQTTENL--WKA 231
LW+D+ P WV +L +L + + + E L W++
Sbjct: 176 LWLDSRGVPEWVDELLAELDERQAARREQRVAERAAGGGDERQEGGGGRRGAEELANWES 235
Query: 230 FFAHPSRWFDKRKIKKRDKHPDFTHKDCNK-ALWIDDLRTPAWVIPMLNNL--------- 81
A+P W+D R K D+ PDF +D + ALW+D P WV +L L
Sbjct: 236 LRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAELDAAAQARRQ 295
Query: 80 --QVEAFSAPLSVE---------TLWIAYFSDPSKWF 3
Q E +AP + E W + ++P WF
Sbjct: 296 QRQAERSAAPSTPELEAKRAAEAANWESLRANPEAWF 332
Score = 98.6 bits (244), Expect = 1e-18
Identities = 67/225 (29%), Positives = 97/225 (43%), Gaps = 54/225 (24%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKS-LWIEDFKTPTRVAPMLNNLQDKR----------- 450
+W+DNR K S PDFV + S LW++ P V +L L +++
Sbjct: 150 EWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELLAELDERQAARREQRVAER 209
Query: 449 ------------------ENL--WNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDA-LW 333
E L W + +P +W+DNR K S+ PDFV +D A LW
Sbjct: 210 AAGGGDERQEGGGGRRGAEELANWESLRANPIEWYDNRSRKTSDRQPDFVRRDDRRAALW 269
Query: 332 IDNTRNPTWVISMLDKLKNDAS----------SASQTTENL----------WKAFFAHPS 213
+D+ P WV +L +L A SA+ +T L W++ A+P
Sbjct: 270 LDSRGAPPWVGDLLAELDAAAQARRQQRQAERSAAPSTPELEAKRAAEAANWESLRANPE 329
Query: 212 RWFDKRKIKKRDKHPDFTHK-DCNKALWIDDLRTPAWVIPMLNNL 81
WFD R K+ K PDF K D +ALW+ P W+ +L+ L
Sbjct: 330 AWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLNELLSEL 374
>ref|XP_006393529.1| hypothetical protein EUTSA_v10011640mg [Eutrema salsugineum]
gi|557090107|gb|ESQ30815.1| hypothetical protein
EUTSA_v10011640mg [Eutrema salsugineum]
Length = 329
Score = 97.1 bits (240), Expect = 3e-18
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 6/146 (4%)
Frame = -2
Query: 500 KTPTRVAPMLNNLQDKREN---LWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWI 330
+TP + + +++ + + LWN FF +P +W+D R+ KK+ PDF HKDT++A W+
Sbjct: 175 QTPQKPKSETDGIEESKNDEIHLWNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWL 234
Query: 329 DNTRNPTWV---ISMLDKLKNDASSASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFT 159
+ P WV + + D+ + D FFA+P W+D R+ K + PDF
Sbjct: 235 -GSDTPVWVTRQLELFDQKRPD-------------VFFANPQEWWDNRRDKLNPRWPDFK 280
Query: 158 HKDCNKALWIDDLRTPAWVIPMLNNL 81
HKD +ALW+ TP WV L L
Sbjct: 281 HKDTGEALWLHS-DTPVWVSRQLELL 305
Score = 84.0 bits (206), Expect = 3e-14
Identities = 41/104 (39%), Positives = 61/104 (58%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTRVAPMLNNLQDKRENLWNNFFTDPS 414
+W+D R+ KK+ PDF HK T+++ W+ TP V L KR ++ FF +P
Sbjct: 207 EWWDKRRNKKNPKQPDFKHKDTNEAFWLGS-DTPVWVTRQLELFDQKRPDV---FFANPQ 262
Query: 413 KWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKL 282
+W+DNR+ K + PDF HKDT +ALW+ ++ P WV L+ L
Sbjct: 263 EWWDNRRDKLNPRWPDFKHKDTGEALWL-HSDTPVWVSRQLELL 305
Score = 68.6 bits (166), Expect = 1e-09
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = -2
Query: 287 KLKNDASSASQTTE-NLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 111
K + D S+ E +LW AFFA+P W+DKR+ KK K PDF HKD N+A W+ TP
Sbjct: 181 KSETDGIEESKNDEIHLWNAFFANPDEWWDKRRNKKNPKQPDFKHKDTNEAFWLGS-DTP 239
Query: 110 AWVIPMLNNLQVEAFSAPLSVETLWIAYFSDPSKWF 3
WV Q+E F + +F++P +W+
Sbjct: 240 VWV-----TRQLELFD-----QKRPDVFFANPQEWW 265
>gb|EXB42196.1| hypothetical protein L484_001276 [Morus notabilis]
Length = 380
Score = 96.7 bits (239), Expect = 4e-18
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 30/198 (15%)
Frame = -2
Query: 593 KWFDNRKTK----KSSTHPDFVHKSTHKSLWIE-----------------DFKTPTRVAP 477
+W+DNR K S +PDF+HK + +W+ K T V
Sbjct: 168 QWWDNRDKKCNRSVSQKYPDFIHKDDRRGVWLNRAPRSVLIELEGLQFDVQIKNSTEVEQ 227
Query: 476 MLNNLQDKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPT 309
+D W + + +W D R K + +PDF HKD ALW+ + P
Sbjct: 228 FKGAKKDGDSASWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSSA--PQ 285
Query: 308 WVISMLDKLKNDAS-----SASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCN 144
WV L+ LK D + + LWK HP +W+D R K ++ PDF HK+
Sbjct: 286 WVSLQLEGLKFDGGFKKPKAVKANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKETG 345
Query: 143 KALWIDDLRTPAWVIPML 90
+ LW+ +P WV+ L
Sbjct: 346 EGLWLRS--SPTWVLSKL 361
Score = 73.2 bits (178), Expect = 5e-11
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Frame = -2
Query: 548 DFVHKS--THKSLWIEDFKTPTRVAPMLNNLQDKRENLWNNFFTDPSKWFDNRKIK---- 387
+F+ +S T KS + + TR N + + W + +P +W+DNR K
Sbjct: 121 NFIDESVQTAKSSVLYKQEKATRNVSDRVNKDESDLSSWTDLLENPKQWWDNRDKKCNRS 180
Query: 386 KSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDASSASQT------------TEN 243
S +PDF+HKD +W++ R P V+ L+ L+ D + T
Sbjct: 181 VSQKYPDFIHKDDRRGVWLN--RAPRSVLIELEGLQFDVQIKNSTEVEQFKGAKKDGDSA 238
Query: 242 LWKAFFAHPSRWFDKRKIK----KRDKHPDFTHKDCNKALWIDDLRTPAWVIPMLNNLQV 75
W+ + +W D R K ++PDF HKD + ALW+ P WV L L+
Sbjct: 239 SWRDLIDNSEQWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSS--APQWVSLQLEGLKF 296
Query: 74 E-AFSAPLSV----ETLWIAYFSDPSKWF 3
+ F P +V + LW P KW+
Sbjct: 297 DGGFKKPKAVKANKDELWKDLVEHPEKWW 325
Score = 71.2 bits (173), Expect = 2e-10
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNLQ----------- 459
+W D R +K + +PDF HK +LW+ P V+ L L+
Sbjct: 249 QWKDYRNSKLNGLVNPRYPDFKHKDGSLALWLSS--APQWVSLQLEGLKFDGGFKKPKAV 306
Query: 458 -DKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISML--D 288
++ LW + P KW+DNR K N PDF HK+T + LW+ + +PTWV+S L
Sbjct: 307 KANKDELWKDLVEHPEKWWDNRLGKLKENSPDFKHKETGEGLWLRS--SPTWVLSKLPPP 364
Query: 287 KLKNDASSASQTT 249
K K D+S + T
Sbjct: 365 KSKQDSSFGKRDT 377
>ref|XP_004513105.1| PREDICTED: protein OSB2, chloroplastic-like [Cicer arietinum]
Length = 377
Score = 93.6 bits (231), Expect = 4e-17
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTRVAPMLNNLQDKRENLWNNFFTDPS 414
+W D + TK+S+ F K + + + D + W+N DP
Sbjct: 195 EWRDVQSTKESAESTAFERKPNGEI----QSEVKQSMTGGEKKYPDSLSSSWSNLLGDPK 250
Query: 413 KWFDNRKIKK----SNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDA------SS 264
+W+D R K+ S +PDF KD +WID R P WV+S L +L+ D +
Sbjct: 251 QWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKWVLSRLQELEFDIPVVKPKQA 308
Query: 263 ASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIPMLNN 84
+ W +P++W+D R KK ++ PDF HK+ + LW+ D +P+WV+P L
Sbjct: 309 KDGNGDQSWNDLVQNPAKWWDNRLNKKNERGPDFKHKETGEGLWLKD--SPSWVLPKLPP 366
Query: 83 LQ 78
LQ
Sbjct: 367 LQ 368
Score = 55.8 bits (133), Expect = 8e-06
Identities = 37/163 (22%), Positives = 64/163 (39%), Gaps = 13/163 (7%)
Frame = -2
Query: 452 RENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKND 273
+E W + +PS+W D + K+S F K N + +
Sbjct: 182 KEKFWKDVLNNPSEWRDVQSTKESAESTAFERKP-----------NGEIQSEVKQSMTGG 230
Query: 272 ASSASQTTENLWKAFFAHPSRWFDKRKIKKRD----KHPDFTHKDCNKALWIDDLRTPAW 105
+ + W P +W+D R K+++ ++PDF KD + +WID R P W
Sbjct: 231 EKKYPDSLSSSWSNLLGDPKQWWDYRDSKRKELVSPRYPDFKRKDGSAPIWID--RAPKW 288
Query: 104 VIPMLNNLQVEAFSAPL---------SVETLWIAYFSDPSKWF 3
V+ L L+ F P+ + + W +P+KW+
Sbjct: 289 VLSRLQELE---FDIPVVKPKQAKDGNGDQSWNDLVQNPAKWW 328
>ref|XP_002510278.1| conserved hypothetical protein [Ricinus communis]
gi|223550979|gb|EEF52465.1| conserved hypothetical
protein [Ricinus communis]
Length = 378
Score = 90.1 bits (222), Expect = 4e-16
Identities = 51/140 (36%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Frame = -2
Query: 470 NNLQD--KRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVIS 297
NN+++ R +LW FF P +W+D RK K++ PDF HK + LW+ +P WV
Sbjct: 210 NNMENYKNRLDLWQLFFCKPCEWWDKRKSKQNPELPDFKHKYNGENLWL-RPDDPPWVKR 268
Query: 296 MLDKLKNDASSASQTT-------------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTH 156
L L + + Q +LW+ FF++P W+D RK K + PDF H
Sbjct: 269 HLQLLDMEIAKQRQANGVGKSGMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKH 328
Query: 155 KDCNKALWI--DDLRTPAWV 102
KD +ALWI DD P WV
Sbjct: 329 KDTGEALWIMRDD---PPWV 345
Score = 75.9 bits (185), Expect = 8e-12
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 28/149 (18%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTP--TRVAPMLN---------------- 468
+W+D RK+K++ PDF HK ++LW+ P R +L+
Sbjct: 231 EWWDKRKSKQNPELPDFKHKYNGENLWLRPDDPPWVKRHLQLLDMEIAKQRQANGVGKSG 290
Query: 467 -NLQDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWV---I 300
R +LW FF++P +W+DNRK K + PDF HKDT +ALWI +P WV +
Sbjct: 291 MMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKHKDTGEALWIMRD-DPPWVKRQL 349
Query: 299 SMLDKL------KNDASSASQTTENLWKA 231
+LD + + S SQ +E ++ A
Sbjct: 350 KLLDFIMAEQCVREKVGSGSQLSEWIFDA 378
>ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
gi|223531010|gb|EEF32864.1| hypothetical protein
RCOM_1716690 [Ricinus communis]
Length = 281
Score = 90.1 bits (222), Expect = 4e-16
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 28/196 (14%)
Frame = -2
Query: 593 KWFDNRKTKKSSTHPDFVHKSTHKSLWIEDFKTPTRVAPMLNNLQ-DKRE---------- 447
+W+D R + F K + L+I D TP + L + DK+
Sbjct: 78 EWWDIRSQVDNPKGASFERKKNGELLYI-DHATPKWIQEKLEGMAFDKKTTVEGGKGSMI 136
Query: 446 -------NLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPTWVI 300
N W +DP +W+D R K + HPDF KD ALW++ P W++
Sbjct: 137 KNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLNKA--PRWIL 194
Query: 299 SMLDKLKNDAS--SASQTTENL----WKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKA 138
S L+KL+ D + Q ++ W HP++W+D R KK +++PDF HK+
Sbjct: 195 SELEKLEFDVQIPKSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVG 254
Query: 137 LWIDDLRTPAWVIPML 90
LW+ + +P WV+ L
Sbjct: 255 LWLSN--SPTWVLSEL 268
Score = 77.4 bits (189), Expect = 3e-12
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL------------ 462
+W+D R +K + HPDF K +LW+ K P + L L
Sbjct: 155 QWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLN--KAPRWILSELEKLEFDVQIPKSKQV 212
Query: 461 -QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDK 285
Q K + W + P+KW+DNR KK+ +PDF HK+T LW+ N +PTWV+S L
Sbjct: 213 KQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVGLWLSN--SPTWVLSELPP 270
Query: 284 LKNDASSAS 258
+K D ++A+
Sbjct: 271 MKGDKNAAT 279
Score = 67.0 bits (162), Expect = 4e-09
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Frame = -2
Query: 449 ENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDA 270
E W + T P +W+D R + F K + L+ID+ P W+ L+ + D
Sbjct: 66 EQSWKDLLTSPHEWWDIRSQVDNPKGASFERKKNGELLYIDHA-TPKWIQEKLEGMAFDK 124
Query: 269 SSA-----------SQTTENLWKAFFAHPSRWFDKRKIK----KRDKHPDFTHKDCNKAL 135
+ + N W+ + P +W+D R K KHPDF KD + AL
Sbjct: 125 KTTVEGGKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVAL 184
Query: 134 WIDDLRTPAWVIPMLNNLQVEAFSAPLSVETL-------WIAYFSDPSKWF 3
W++ + P W++ L L+ + P S + W P+KW+
Sbjct: 185 WLN--KAPRWILSELEKLEFDV-QIPKSKQVKQHKGDANWTDLVGHPNKWW 232
>ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata] gi|297315788|gb|EFH46211.1| hypothetical protein
ARALYDRAFT_492872 [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 89.7 bits (221), Expect = 5e-16
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Frame = -2
Query: 458 DKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPTWVISML 291
D+ + WN+ +P +W+D+R+ K + HPDF KD+ +LW++ P WV+ L
Sbjct: 226 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLNKA--PNWVLPKL 283
Query: 290 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 129
+ LK D E WK +P +W+D R K+ K PDF HK+ +ALW+
Sbjct: 284 EGLKFDVLVPKGRVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 343
Query: 128 DDLRTPAWVIPML 90
++ +P WV+P L
Sbjct: 344 NE--SPTWVLPKL 354
Score = 78.6 bits (192), Expect = 1e-12
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL------------ 462
+W+D+R+ K + HPDF K + SLW+ K P V P L L
Sbjct: 241 EWWDHRENKVNGLVKPRHPDFKSKDSSLSLWLN--KAPNWVLPKLEGLKFDVLVPKGRVV 298
Query: 461 -QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDK 285
Q K E W + +P KW+DNR K++ PDF HK+T +ALW++ +PTWV+ L
Sbjct: 299 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKLPP 356
Query: 284 LKNDASS 264
+K S
Sbjct: 357 VKKKQES 363
>ref|XP_006413910.1| hypothetical protein EUTSA_v10025547mg [Eutrema salsugineum]
gi|557115080|gb|ESQ55363.1| hypothetical protein
EUTSA_v10025547mg [Eutrema salsugineum]
Length = 360
Score = 89.0 bits (219), Expect = 9e-16
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 10/127 (7%)
Frame = -2
Query: 440 WNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKND 273
WN+ +P +W+D+R+ K + HPDF +KDT +LW++ P WV+ L+ L+ D
Sbjct: 225 WNHLIENPKEWWDHRENKANGLVKPRHPDFKNKDTSVSLWLNKA--PDWVLPKLEGLEFD 282
Query: 272 ASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTP 111
E WK +P +W+D R K+ K PDF HK+ +ALW+++ +P
Sbjct: 283 VLVPKSRGVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNE--SP 340
Query: 110 AWVIPML 90
WV+P L
Sbjct: 341 TWVLPKL 347
Score = 78.6 bits (192), Expect = 1e-12
Identities = 44/118 (37%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL------------ 462
+W+D+R+ K + HPDF +K T SLW+ K P V P L L
Sbjct: 234 EWWDHRENKANGLVKPRHPDFKNKDTSVSLWLN--KAPDWVLPKLEGLEFDVLVPKSRGV 291
Query: 461 -QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISML 291
Q K E W + +P KW+DNR K++ PDF HK+T +ALW++ +PTWV+ L
Sbjct: 292 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKL 347
>ref|NP_001031674.1| plastid transcriptionally active 9 [Arabidopsis thaliana]
gi|332658861|gb|AEE84261.1| plastid transcriptionally
active 9 [Arabidopsis thaliana]
Length = 371
Score = 89.0 bits (219), Expect = 9e-16
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Frame = -2
Query: 458 DKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPTWVISML 291
D+ + WN+ +P +W+D+R+ K + HPDF KD+ +LW++ P WV+ L
Sbjct: 231 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKL 288
Query: 290 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 129
+ L+ D E WK +P +W+D R K+ K PDF HK+ +ALW+
Sbjct: 289 EGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 348
Query: 128 DDLRTPAWVIPML 90
++ +P WV+P L
Sbjct: 349 NE--SPTWVLPKL 359
Score = 78.2 bits (191), Expect = 2e-12
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL------------ 462
+W+D+R+ K + HPDF K + SLW+ K P V P L L
Sbjct: 246 EWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLVPKARVV 303
Query: 461 -QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDK 285
Q K E W + +P KW+DNR K++ PDF HK+T +ALW++ +PTWV+ L
Sbjct: 304 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKLPP 361
Query: 284 LKNDASS 264
+K S
Sbjct: 362 VKKKQES 368
>ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana]
gi|75334520|sp|Q9FYJ2.1|OSB4_ARATH RecName: Full=Protein
OSB4, chloroplastic; AltName: Full=Organellar
single-stranded DNA-binding protein 4; Flags: Precursor
gi|9755375|gb|AAF98182.1|AC000107_5 F17F8.7 [Arabidopsis
thaliana] gi|332193185|gb|AEE31306.1| protein OSB4
[Arabidopsis thaliana]
Length = 360
Score = 89.0 bits (219), Expect = 9e-16
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
Frame = -2
Query: 560 STHPDFVHKSTHKSL-WIEDFKTPTRVAPMLN----------NLQDKRE---NLWNNFFT 423
S H F H+ + L +IE K +V P L+ ++Q RE NLW +
Sbjct: 170 SFHGSFSHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTNLWFDLVD 229
Query: 422 DPSKWFDNRKIKKSNN----HPDFVHKDTHDALWIDNTRNPTWVISMLDKLKNDA---SS 264
P++W D R++K++ + HPDF KD ALW++N PT ++S L +K D +
Sbjct: 230 KPNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWLNNA--PTEILSELKDVKFDIPKYAK 287
Query: 263 ASQTTENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWIDDLRTPAWVIPML 90
+ E WK + ++W+D R K+ K PDF HK+ LW+ D +P+WV+ L
Sbjct: 288 QPKAGEESWKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWLSD--SPSWVLEKL 343
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 14/123 (11%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNLQ----------D 456
+W D R+ K++ + HPDF K ++LW+ + PT + L +++
Sbjct: 233 EWCDYREMKQNGSVNPKHPDFKKKDGSQALWLNN--APTEILSELKDVKFDIPKYAKQPK 290
Query: 455 KRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDKLKN 276
E W + + +KW+DNR K++ PDF HK+T LW+ + +P+WV+ L K+
Sbjct: 291 AGEESWKDLVDNMNKWWDNRVDKRTPKSPDFKHKETGVGLWLSD--SPSWVLEKLPPPKS 348
Query: 275 DAS 267
S
Sbjct: 349 KTS 351
>dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 89.0 bits (219), Expect = 9e-16
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 10/133 (7%)
Frame = -2
Query: 458 DKRENLWNNFFTDPSKWFDNRKIKKSN----NHPDFVHKDTHDALWIDNTRNPTWVISML 291
D+ + WN+ +P +W+D+R+ K + HPDF KD+ +LW++ P WV+ L
Sbjct: 231 DEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLNKA--PNWVLPKL 288
Query: 290 DKLKNDASSASQTT------ENLWKAFFAHPSRWFDKRKIKKRDKHPDFTHKDCNKALWI 129
+ L+ D E WK +P +W+D R K+ K PDF HK+ +ALW+
Sbjct: 289 EGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWL 348
Query: 128 DDLRTPAWVIPML 90
++ +P WV+P L
Sbjct: 349 NE--SPTWVLPKL 359
Score = 78.2 bits (191), Expect = 2e-12
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Frame = -2
Query: 593 KWFDNRKTKKSST----HPDFVHKSTHKSLWIEDFKTPTRVAPMLNNL------------ 462
+W+D+R+ K + HPDF K + SLW+ K P V P L L
Sbjct: 246 EWWDHRENKVNGLVKPRHPDFKSKDSSFSLWLN--KAPNWVLPKLEGLEFDVLVPKARVV 303
Query: 461 -QDKRENLWNNFFTDPSKWFDNRKIKKSNNHPDFVHKDTHDALWIDNTRNPTWVISMLDK 285
Q K E W + +P KW+DNR K++ PDF HK+T +ALW++ +PTWV+ L
Sbjct: 304 KQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLN--ESPTWVLPKLPP 361
Query: 284 LKNDASS 264
+K S
Sbjct: 362 VKKKQES 368