BLASTX nr result
ID: Ephedra25_contig00002348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00002348
(1201 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK23906.1| unknown [Picea sitchensis] 123 4e-40
gb|EMJ10645.1| hypothetical protein PRUPE_ppa009692mg [Prunus pe... 122 9e-33
ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloro... 121 4e-32
sp|P82413.2|RK19_SPIOL RecName: Full=50S ribosomal protein L19, ... 119 6e-32
emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera] 121 6e-32
ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloro... 120 7e-32
ref|XP_006477103.1| PREDICTED: 50S ribosomal protein L19-1, chlo... 120 2e-31
ref|XP_006440191.1| hypothetical protein CICLE_v10021998mg [Citr... 120 2e-31
gb|EXC02074.1| 50S ribosomal protein L19-1 [Morus notabilis] 120 5e-31
gb|EOY24209.1| Ribosomal protein L19 family protein [Theobroma c... 117 8e-31
ref|XP_002326473.1| predicted protein [Populus trichocarpa] gi|5... 120 8e-31
ref|XP_006281041.1| hypothetical protein CARUB_v10027056mg [Caps... 122 8e-31
gb|AFK39551.1| unknown [Medicago truncatula] 120 1e-30
ref|XP_003611376.1| 50S ribosomal protein L19 [Medicago truncatu... 120 1e-30
ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycin... 120 1e-30
ref|XP_004300339.1| PREDICTED: 50S ribosomal protein L19, chloro... 120 1e-30
ref|XP_006284481.1| hypothetical protein CARUB_v10005667mg [Caps... 120 5e-30
gb|ABD65070.1| plastid ribosomal protein L19, putative [Brassica... 120 5e-30
ref|NP_001238523.1| uncharacterized protein LOC100305649 [Glycin... 120 6e-30
gb|AAM64533.1| contains similarity to plastid ribosomal protein ... 119 1e-29
>gb|ABK23906.1| unknown [Picea sitchensis]
Length = 234
Score = 123 bits (309), Expect(2) = 4e-40
Identities = 56/75 (74%), Positives = 70/75 (93%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRRF++YKG+VISRQNAGI TTIR+RRIIAGVG+EIVFP+YSP + E+ +++H+KVRRAR
Sbjct: 160 RRRFSVYKGIVISRQNAGIHTTIRIRRIIAGVGIEIVFPLYSPNLKEIKVVKHRKVRRAR 219
Query: 437 LYYLRDKLPKFSTVK 393
LYYLR+KLP+FST K
Sbjct: 220 LYYLREKLPRFSTFK 234
Score = 69.7 bits (169), Expect(2) = 4e-40
Identities = 52/146 (35%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSRSNQLASSKFALSFGYKAQSLKSYS------LSGYGFQ 877
MATN+LHQV FVP A+ SS+S S F+ + K + LK+ + +SG +
Sbjct: 1 MATNILHQVPGFVPSRGALLSSKSELALSFSFSSAMNLKGRPLKTCAPLTATVVSG-RWC 59
Query: 876 KTLYPNVARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALAR 697
N I A+S D +S E + E ES+L V + EQP++ +R
Sbjct: 60 TASSSTTRESNFIVHAQSVDA--VSESEEEGGTQNEVASSDESTLEVSE--EQPKLP-SR 114
Query: 696 TRRPKLNQLMGYLNKQAVDAVEEKRP 619
R KL Q+MG L+KQA++A E++RP
Sbjct: 115 KPRIKLGQIMGILHKQAIEATEKERP 140
>gb|EMJ10645.1| hypothetical protein PRUPE_ppa009692mg [Prunus persica]
Length = 281
Score = 122 bits (306), Expect(2) = 9e-33
Identities = 57/75 (76%), Positives = 68/75 (90%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+VISRQNAGI TTIR+RRIIAG+GVEIVFP+YSP I E+ +L H+KVRRAR
Sbjct: 207 KRRLSVYKGIVISRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKELKVLSHRKVRRAR 266
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+FST K
Sbjct: 267 LYYLRDKLPRFSTFK 281
Score = 46.2 bits (108), Expect(2) = 9e-33
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Frame = -2
Query: 945 FALSFGYKAQS----LKSYSLSGYGFQKTLYPNVARRNLIAFAESADT-TPAEDSAESTP 781
F+ SF ++ S + +S F + P VA + + F AD+ T E A +
Sbjct: 71 FSASFSRRSSSNSARVSLSRVSSSSFGSSFCPIVAAMSRLDFVVRADSSTEGEAEAVGSE 130
Query: 780 VEQESTQDTESSLVVQDVAEQPQVALARTRRP---KLNQLMGYLNKQAVDAVEEKRP 619
E+ + E+ VV+ E+P+ +T R KL +MG LNK+AV+A ++RP
Sbjct: 131 EASEAIVEAEAEPVVESEPEEPEPEEPKTPRKSRVKLGDIMGILNKRAVEAAVQERP 187
>ref|XP_002264869.2| PREDICTED: 50S ribosomal protein L19, chloroplastic [Vitis
vinifera] gi|296088907|emb|CBI38456.3| unnamed protein
product [Vitis vinifera]
Length = 231
Score = 121 bits (303), Expect(2) = 4e-32
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+VIS+QNAGI TTIRVRRIIAGVGVEIVFP+YSP I E+ ++ H+KVRRAR
Sbjct: 157 RRRLSIYKGIVISKQNAGIHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRAR 216
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 217 LYYLRDKLPRLSTFK 231
Score = 45.1 bits (105), Expect(2) = 4e-32
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSRSNQLASSKF----ALSFGYKAQSLKSYSLSGYGFQKT 871
MA+ VL Q + P + N +L S F + S S +S + + F
Sbjct: 1 MASKVLPQALFITP--RSSNQWPPKKLGLSTFPSPRSSSLNLNRLSTSRFSSNSFAFHFR 58
Query: 870 LYPNVARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESS--LVVQDVAEQPQVALAR 697
+R I AE+ + E A+ E+E+ +TES L +D A+ P R
Sbjct: 59 PIVVSPKRFFIVRAEADNE--GELGADENTEEEETVSETESEVKLDAEDEAKPP-----R 111
Query: 696 TRRPKLNQLMGYLNKQAVDAVEEKRP 619
R KL +MG LNK+A++A E++RP
Sbjct: 112 KPRVKLGDIMGILNKRAIEASEKERP 137
>sp|P82413.2|RK19_SPIOL RecName: Full=50S ribosomal protein L19, chloroplastic; AltName:
Full=CL19; Flags: Precursor gi|189096140|pdb|3BBO|R
Chain R, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|7582403|gb|AAF64312.1|AF250384_1
plastid ribosomal protein L19 precursor [Spinacia
oleracea]
Length = 233
Score = 119 bits (297), Expect(2) = 6e-32
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+VISRQNAGI TTIR+RRIIAGVGVEIVFP+YSP I E+ ++ H+KVR+AR
Sbjct: 159 KRRLSVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKAR 218
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 219 LYYLRDKLPRLSTFK 233
Score = 47.0 bits (110), Expect(2) = 6e-32
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 8/148 (5%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSR-SNQL-----ASSKFALSFGYKAQSLKSYSLSGYGFQ 877
MA+ VL Q +P H++ QL ++ +F+LS ++ + S + S
Sbjct: 1 MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60
Query: 876 K--TLYPNVARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVAL 703
+++ AR + + +E+ D++ A + + E+E ++E+ + E+P
Sbjct: 61 NFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEA-----EAEERPP--- 112
Query: 702 ARTRRPKLNQLMGYLNKQAVDAVEEKRP 619
R +R KL +MG LNK+AV A EE RP
Sbjct: 113 -RQQRVKLGDIMGILNKKAVHAAEELRP 139
>emb|CAN82787.1| hypothetical protein VITISV_037813 [Vitis vinifera]
Length = 231
Score = 121 bits (303), Expect(2) = 6e-32
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+VIS+QNAGI TTIRVRRIIAGVGVEIVFP+YSP I E+ ++ H+KVRRAR
Sbjct: 157 RRRLSIYKGIVISKQNAGIHTTIRVRRIIAGVGVEIVFPVYSPNIKEIKVVNHRKVRRAR 216
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 217 LYYLRDKLPRLSTFK 231
Score = 44.7 bits (104), Expect(2) = 6e-32
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSRSNQLASSKF----ALSFGYKAQSLKSYSLSGYGFQKT 871
MA+ VL Q + P + N +L S F + S S +S + + F
Sbjct: 1 MASKVLPQALFITP--RSSNQXPPKKLGLSTFPSPRSXSLNLNRLSTSRFSSNSFXFHFR 58
Query: 870 LYPNVARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESS--LVVQDVAEQPQVALAR 697
+R I AE+ + E + E+E+ +TES L +D A+ P R
Sbjct: 59 PIVVSPKRFFIVXAEADNE--GELGPDENTEEEETVSETESEVKLDAEDEAKPP-----R 111
Query: 696 TRRPKLNQLMGYLNKQAVDAVEEKRP 619
R KL +MG LNK+A++A E++RP
Sbjct: 112 KPRVKLGDIMGILNKRAIEASEKERP 137
>ref|XP_004147231.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
sativus] gi|449523724|ref|XP_004168873.1| PREDICTED: 50S
ribosomal protein L19, chloroplastic-like [Cucumis
sativus]
Length = 221
Score = 120 bits (301), Expect(2) = 7e-32
Identities = 57/83 (68%), Positives = 71/83 (85%)
Frame = -3
Query: 641 MPLKRKGXRRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILE 462
+ L+ + RRR ++Y+G+VIS+QNAGI TTIR+RRIIAGVGVEIVFP+YSP I E+ ++
Sbjct: 139 LKLEVQENRRRLSVYRGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIREIRVVS 198
Query: 461 HKKVRRARLYYLRDKLPKFSTVK 393
H+KVRRARLYYLRDKLPK ST K
Sbjct: 199 HRKVRRARLYYLRDKLPKLSTFK 221
Score = 45.1 bits (105), Expect(2) = 7e-32
Identities = 40/140 (28%), Positives = 56/140 (40%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSRSNQLASSKFALSFGYKAQSLKSYSLSGYGFQKTLYPN 859
MA+ +L Q +P NQ A + + +LS +
Sbjct: 1 MASKILPQAVISIP-------RNPNQCAPRRLGFCSAVSGTRVSFSTLSSSSIGSHFHHT 53
Query: 858 VARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALARTRRPKL 679
VA AF A+ P DSA E E ES Q E+P +R R KL
Sbjct: 54 VAAPLRRAFVVRAEANPEADSAAEEAPEAEVEAAVESD--AQPEEEKP----SRKPRVKL 107
Query: 678 NQLMGYLNKQAVDAVEEKRP 619
+MG LNK+A++A E++RP
Sbjct: 108 GDVMGILNKRAIEASEKERP 127
>ref|XP_006477103.1| PREDICTED: 50S ribosomal protein L19-1, chloroplastic-like [Citrus
sinensis]
Length = 236
Score = 120 bits (300), Expect(2) = 2e-31
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+V+SRQNAGI TTIR+RRIIAG+GVEIVFP+YSP I E+ ++ H+KVRRAR
Sbjct: 162 RRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRAR 221
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 222 LYYLRDKLPRLSTFK 236
Score = 43.9 bits (102), Expect(2) = 2e-31
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = -2
Query: 837 AFAESADTTPAEDSAESTPVEQESTQDTESSLVV------QDVAEQPQVALARTRRPKLN 676
+F A+ ++ ES EQ + +VV +D E+ +V R R KL
Sbjct: 64 SFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEEVKAPRKPRVKLG 123
Query: 675 QLMGYLNKQAVDAVEEKRP 619
+MG LNK+AV+A E +RP
Sbjct: 124 DIMGILNKRAVEASESERP 142
>ref|XP_006440191.1| hypothetical protein CICLE_v10021998mg [Citrus clementina]
gi|557542453|gb|ESR53431.1| hypothetical protein
CICLE_v10021998mg [Citrus clementina]
Length = 236
Score = 120 bits (300), Expect(2) = 2e-31
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+V+SRQNAGI TTIR+RRIIAG+GVEIVFP+YSP I E+ ++ H+KVRRAR
Sbjct: 162 RRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRAR 221
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 222 LYYLRDKLPRLSTFK 236
Score = 43.9 bits (102), Expect(2) = 2e-31
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = -2
Query: 837 AFAESADTTPAEDSAESTPVEQESTQDTESSLVV------QDVAEQPQVALARTRRPKLN 676
+F A++ ++ ES EQ + +VV +D E+ +V R R KL
Sbjct: 64 SFVVRAESNEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEEVKAPRKPRVKLG 123
Query: 675 QLMGYLNKQAVDAVEEKRP 619
+MG LNK+A++A E +RP
Sbjct: 124 DIMGILNKRAIEASESERP 142
>gb|EXC02074.1| 50S ribosomal protein L19-1 [Morus notabilis]
Length = 265
Score = 120 bits (302), Expect(2) = 5e-31
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+VISRQNAGI TTIR+RRIIAG+GVEIVFP+YSP I E+ ++ H+KVRRAR
Sbjct: 160 RRRLSVYKGIVISRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVNHRKVRRAR 219
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 220 LYYLRDKLPRLSTFK 234
Score = 42.0 bits (97), Expect(2) = 5e-31
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = -2
Query: 990 HAMNSSRSNQLASSKFALSFGYKAQSLKSYSLSGYGFQKTLYPNVARRNLIAFAES---A 820
+++ S RS+ + S+ + SFG S +G P A+R+ AES
Sbjct: 31 YSVISRRSSPMKSAGVSTSFGG----------SNFG------PLFAKRDFAVRAESNAEG 74
Query: 819 DTTPAEDSAESTPVE-QESTQDTESSLVVQDVAEQPQVALARTRRPKLNQLMGYLNKQAV 643
+ AE++AE E E TE + V+E + R R KL +MG LNK+AV
Sbjct: 75 EAVEAEENAEENVGEGSEVVAGTEGE--GEAVSESEEAKPPRKPRVKLGDIMGILNKRAV 132
Query: 642 DAVEEKRP 619
+A E +RP
Sbjct: 133 EASENERP 140
>gb|EOY24209.1| Ribosomal protein L19 family protein [Theobroma cacao]
Length = 242
Score = 117 bits (294), Expect(2) = 8e-31
Identities = 53/75 (70%), Positives = 68/75 (90%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+V+S+QNAGI TTIR+RRIIAG+GVEIVFP+YSP I E+ +++H+KVRRAR
Sbjct: 168 RRRLSVYKGIVMSKQNAGIHTTIRIRRIIAGIGVEIVFPVYSPNIKEIKVVKHRKVRRAR 227
Query: 437 LYYLRDKLPKFSTVK 393
LYYLR+KLP+ ST K
Sbjct: 228 LYYLREKLPRLSTFK 242
Score = 44.3 bits (103), Expect(2) = 8e-31
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSRSNQLASSKFALSFGYKAQSLKSYSLSGYGFQKTLYPN 859
MA+ VL Q +P + + S F LS G + S+SG+ + + +
Sbjct: 1 MASQVLPQALHMIPINQVQSFNPVKNFGFSAF-LSRGPSPLTTSKVSVSGFHLKIPVGSS 59
Query: 858 ---VARRNLIAFAES-------ADTTPAEDSAESTPVEQESTQDTESSLVVQD-VAEQPQ 712
ARR + AES + +E+ E + E+ ++ E+ +D V E+P+
Sbjct: 60 SSCFARREFVVRAESNPEGVGEVEAEASENDVEEAETKAEAEEEVEAGEDGEDKVEEKPK 119
Query: 711 VALARTRRP--KLNQLMGYLNKQAVDAVEEKRP 619
R+P KL +MG LNK+A++ E++RP
Sbjct: 120 ----ERRKPLVKLGDIMGILNKRAIEESEKQRP 148
>ref|XP_002326473.1| predicted protein [Populus trichocarpa]
gi|566149102|ref|XP_006368958.1| ribosomal protein L19
[Populus trichocarpa] gi|118483873|gb|ABK93827.1|
unknown [Populus trichocarpa]
gi|550347317|gb|ERP65527.1| ribosomal protein L19
[Populus trichocarpa]
Length = 241
Score = 120 bits (302), Expect(2) = 8e-31
Identities = 55/75 (73%), Positives = 68/75 (90%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+VIS+QNAGI TTIR+RRIIAG+GVEIVFP+YSP I E+ +++H+KVRRAR
Sbjct: 167 RRRLSIYKGIVISKQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVIKHRKVRRAR 226
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 227 LYYLRDKLPRLSTFK 241
Score = 41.2 bits (95), Expect(2) = 8e-31
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Frame = -2
Query: 981 NSSRSNQLASSKFALSFGYKAQSLKSYSLSGYGFQKTLYPNVARRNLIAFAESAD----- 817
+S SN +SS+F++S + S SLS + + + +R++ + AES
Sbjct: 35 SSYLSNSASSSRFSVS------RVSSTSLSSN--LEAFFKDFSRQSFVTRAESESGGGEV 86
Query: 816 TTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALARTRRPKLNQLMGYLNKQAVDA 637
E+ E VE ++ ++ V+ ++P R R KL ++G LNK+AV+
Sbjct: 87 VEETENVEEEVVVEGSEEEEVQAEAEVEGAVKEP-----RKPRVKLGDIIGILNKRAVET 141
Query: 636 VEEKRP 619
E +RP
Sbjct: 142 SEMERP 147
>ref|XP_006281041.1| hypothetical protein CARUB_v10027056mg [Capsella rubella]
gi|482549745|gb|EOA13939.1| hypothetical protein
CARUB_v10027056mg [Capsella rubella]
Length = 230
Score = 122 bits (305), Expect(2) = 8e-31
Identities = 57/75 (76%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+VISRQNAGI TTIR+RRIIAG+GVEIVFPIYSP I E+ ++ H+KVRRAR
Sbjct: 156 RRRLSIYKGIVISRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRAR 215
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 216 LYYLRDKLPRLSTFK 230
Score = 40.0 bits (92), Expect(2) = 8e-31
Identities = 32/98 (32%), Positives = 45/98 (45%)
Frame = -2
Query: 912 LKSYSLSGYGFQKTLYPNVARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESSLVVQ 733
L +YS S +GF + RR I AE + E E+ E E+ D E
Sbjct: 48 LLNYSGSNFGFP---IDSKKRREFIVKAEESTEGETEAVVENA-AETEAEGDGEGEASAV 103
Query: 732 DVAEQPQVALARTRRPKLNQLMGYLNKQAVDAVEEKRP 619
+ A+ P R R KL +MG LNK+A++ E+ RP
Sbjct: 104 EEAKPP-----RKTRVKLGDVMGILNKKAIEVSEKVRP 136
>gb|AFK39551.1| unknown [Medicago truncatula]
Length = 229
Score = 120 bits (300), Expect(2) = 1e-30
Identities = 56/75 (74%), Positives = 68/75 (90%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+VISRQNAGI TTIRVRRIIAG GVEIVFPIYSP I E+ +++H+KVR+AR
Sbjct: 155 KRRLSIYKGIVISRQNAGIHTTIRVRRIIAGTGVEIVFPIYSPNIKEIKVVKHRKVRQAR 214
Query: 437 LYYLRDKLPKFSTVK 393
LYYL+DKLP+FST K
Sbjct: 215 LYYLKDKLPRFSTFK 229
Score = 41.6 bits (96), Expect(2) = 1e-30
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = -2
Query: 954 SSKFALSFGYKAQSLKSYSLSGYGFQKTLYPNVARRNLIAFAES-ADTTPAEDSAESTPV 778
SS A +FG + L S S+S + P +A+ + + A+S +D A D+ + P
Sbjct: 25 SSCTASTFGSRNLPLISTSIS-----RRCSPLIAKPSFVVRADSNSDAVSASDNVDENPE 79
Query: 777 EQESTQD---TESSLVVQDVAEQPQVALARTRRPKLNQLMGYLNKQAVDAVEEKR 622
++ + TE ++ +E + R R KL +MG L+K+A+ A +E R
Sbjct: 80 ASDNVDEVPETEGEQILDSASEVDESKPPRQTRVKLGDVMGILHKRAIAASDEVR 134
>ref|XP_003611376.1| 50S ribosomal protein L19 [Medicago truncatula]
gi|217074044|gb|ACJ85382.1| unknown [Medicago
truncatula] gi|355512711|gb|AES94334.1| 50S ribosomal
protein L19 [Medicago truncatula]
gi|388520743|gb|AFK48433.1| unknown [Medicago
truncatula]
Length = 229
Score = 120 bits (300), Expect(2) = 1e-30
Identities = 56/75 (74%), Positives = 68/75 (90%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+VISRQNAGI TTIRVRRIIAG GVEIVFPIYSP I E+ +++H+KVR+AR
Sbjct: 155 KRRLSIYKGIVISRQNAGIHTTIRVRRIIAGTGVEIVFPIYSPNIKEIKVVKHRKVRQAR 214
Query: 437 LYYLRDKLPKFSTVK 393
LYYL+DKLP+FST K
Sbjct: 215 LYYLKDKLPRFSTFK 229
Score = 41.6 bits (96), Expect(2) = 1e-30
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = -2
Query: 954 SSKFALSFGYKAQSLKSYSLSGYGFQKTLYPNVARRNLIAFAES-ADTTPAEDSAESTPV 778
SS A +FG + L S S+S + P +A+ + + A+S +D A D+ + P
Sbjct: 25 SSCTASTFGSRNLPLISTSIS-----RRCSPLIAKPSFVVRADSNSDAVSASDNVDENPE 79
Query: 777 EQESTQD---TESSLVVQDVAEQPQVALARTRRPKLNQLMGYLNKQAVDAVEEKR 622
++ + TE ++ +E + R R KL +MG L+K+A+ A +E R
Sbjct: 80 ASDNVDEVPETEGEQILDSASEVEESKPPRQTRVKLGDVMGILHKRAIAASDEVR 134
>ref|NP_001236421.1| uncharacterized protein LOC100500328 [Glycine max]
gi|255630036|gb|ACU15370.1| unknown [Glycine max]
Length = 213
Score = 120 bits (301), Expect(2) = 1e-30
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+VIS+QNAGI TTIR+RRIIAG GVEIVFP+YSP I E+ ++ H+KVRRAR
Sbjct: 139 KRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPVYSPNIKEIKVVSHRKVRRAR 198
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+FST K
Sbjct: 199 LYYLRDKLPRFSTFK 213
Score = 41.2 bits (95), Expect(2) = 1e-30
Identities = 37/140 (26%), Positives = 63/140 (45%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSRSNQLASSKFALSFGYKAQSLKSYSLSGYGFQKTLYPN 859
MA+ VL Q + F P +SSR+ L S + ++ L K +
Sbjct: 1 MASQVLLQQALFAPKLSFPSSSRNVALISRVPSTPISWRCTPL---------IAKPSFVV 51
Query: 858 VARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALARTRRPKL 679
A NL E+ + P++++ + + E E D+E+ + P R R KL
Sbjct: 52 RADTNLDGGGEATEDVPSDNAEKVSEGEAEQVSDSEAP-------KSP-----RKPRVKL 99
Query: 678 NQLMGYLNKQAVDAVEEKRP 619
+MG LN++A++A E++RP
Sbjct: 100 GDIMGILNQRAIEASEKQRP 119
>ref|XP_004300339.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 233
Score = 120 bits (301), Expect(2) = 1e-30
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+VIS+QNAGI TT R+RRIIAGVGVEIVFP+YSP I E+ +L H+KVRRAR
Sbjct: 159 KRRLSIYKGIVISKQNAGIHTTFRIRRIIAGVGVEIVFPLYSPNIKELKVLSHRKVRRAR 218
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+FST K
Sbjct: 219 LYYLRDKLPRFSTFK 233
Score = 40.8 bits (94), Expect(2) = 1e-30
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -2
Query: 855 ARRNLIAFAESADTTPAEDSAEST-PVEQESTQDTESSLVVQDVAEQPQVALARTRRPKL 679
+RR+ AES A ++ E+ E+ D E+ ++ E + R R KL
Sbjct: 60 SRRDFAVRAESEGEVGATENEEAVGEPASEAVVDAEAGAALETEPEPEEKKPPRKPRIKL 119
Query: 678 NQLMGYLNKQAVDAVEEKRP 619
+MG LN +A+DA E++RP
Sbjct: 120 GDVMGILNSRAIDAAEKERP 139
>ref|XP_006284481.1| hypothetical protein CARUB_v10005667mg [Capsella rubella]
gi|482553186|gb|EOA17379.1| hypothetical protein
CARUB_v10005667mg [Capsella rubella]
Length = 227
Score = 120 bits (302), Expect(2) = 5e-30
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+V+SRQNAGI TTIR+RRIIAG+GVEIVFPIYSP I E+ ++ H+KVRRAR
Sbjct: 153 RRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRAR 212
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 213 LYYLRDKLPRLSTFK 227
Score = 38.5 bits (88), Expect(2) = 5e-30
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -2
Query: 807 AEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALARTRRPKLNQLMGYLNKQAVDAVEE 628
AED+AE+ EQ + ++ V +V E + R R KL +MG LNK+A++ E+
Sbjct: 72 AEDNAEAES-EQAVGEIADTEGNVDEVVESGEAKATRKPRIKLGDVMGILNKKAIEVSEK 130
Query: 627 KRP 619
RP
Sbjct: 131 VRP 133
>gb|ABD65070.1| plastid ribosomal protein L19, putative [Brassica oleracea]
Length = 224
Score = 120 bits (302), Expect(2) = 5e-30
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
RRR ++YKG+V+SRQNAGI TTIR+RRIIAG+GVEIVFPIYSP I E+ ++ H+KVRRAR
Sbjct: 150 RRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRAR 209
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 210 LYYLRDKLPRLSTFK 224
Score = 38.5 bits (88), Expect(2) = 5e-30
Identities = 38/131 (29%), Positives = 57/131 (43%)
Frame = -2
Query: 1011 SWFVPCTHAMNSSRSNQLASSKFALSFGYKAQSLKSYSLSGYGFQKTLYPNVARRNLIAF 832
S F C +MN +L S+ +L+ S S SG+ ARR ++
Sbjct: 29 SSFQSCAPSMNP----RLTVSRVSLNH--------SVSKSGFSLDAK-----ARREVLVR 71
Query: 831 AESADTTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALARTRRPKLNQLMGYLNK 652
AE A D+ DTE + V+DV E +V + R KL +MG LN+
Sbjct: 72 AEGEGEGEAVDA----------NADTEGN--VEDVVEAGEVKAPKKTRVKLGDVMGILNQ 119
Query: 651 QAVDAVEEKRP 619
+A++ E+ RP
Sbjct: 120 KAIEVSEKLRP 130
>ref|NP_001238523.1| uncharacterized protein LOC100305649 [Glycine max]
gi|255626193|gb|ACU13441.1| unknown [Glycine max]
Length = 213
Score = 120 bits (301), Expect(2) = 6e-30
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+VIS+QNAGI TTIR+RRIIAG GVEIVFP+YSP I E+ ++ H+KVRRAR
Sbjct: 139 KRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPVYSPNIKEIRVVSHRKVRRAR 198
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+FST K
Sbjct: 199 LYYLRDKLPRFSTFK 213
Score = 38.5 bits (88), Expect(2) = 6e-30
Identities = 37/140 (26%), Positives = 61/140 (43%)
Frame = -2
Query: 1038 MATNVLHQVSWFVPCTHAMNSSRSNQLASSKFALSFGYKAQSLKSYSLSGYGFQKTLYPN 859
MA+ VL Q + F P +SSR+ L S + ++ L K +
Sbjct: 1 MASQVLLQQALFAPKLSFPSSSRNVALISRVPSTPISWRCTPL---------IAKPSFAV 51
Query: 858 VARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALARTRRPKL 679
A N+ E+ + P+ + E + E E D+E+ + P R R KL
Sbjct: 52 RADSNVEGAGEATEDVPSYNVDEVSEGEGEQVSDSEAP-------KSP-----RKPRVKL 99
Query: 678 NQLMGYLNKQAVDAVEEKRP 619
+MG LN++A++A E++RP
Sbjct: 100 GDVMGILNQRAIEASEKQRP 119
>gb|AAM64533.1| contains similarity to plastid ribosomal protein L19 [Arabidopsis
thaliana]
Length = 229
Score = 119 bits (299), Expect(2) = 1e-29
Identities = 55/75 (73%), Positives = 67/75 (89%)
Frame = -3
Query: 617 RRRFALYKGVVISRQNAGIQTTIRVRRIIAGVGVEIVFPIYSPLITEVTILEHKKVRRAR 438
+RR ++YKG+V+SRQNAGI TTIR+RRIIAG+GVEIVFPIYSP I E+ ++ H+KVRRAR
Sbjct: 155 KRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRAR 214
Query: 437 LYYLRDKLPKFSTVK 393
LYYLRDKLP+ ST K
Sbjct: 215 LYYLRDKLPRLSTFK 229
Score = 38.1 bits (87), Expect(2) = 1e-29
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Frame = -2
Query: 1044 LSMATNVLHQVSWFVPCTHAMNSSR---SNQLASSKFALSFGYKAQSLKSYSLSGYGFQK 874
++ ++++L Q +P T + +S S+ L + S ++ ++S S +GF
Sbjct: 1 MATSSHLLPQALHMIPRTPSFSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFA- 59
Query: 873 TLYPNVARRNLIAFAESADTTPAEDSAESTPVEQESTQDTESSLVVQDVAEQPQVALART 694
+ RR IA AE + E E+ VE E+ + E+++ ++ A+ P
Sbjct: 60 --IDSKKRREFIAKAEESTEGETEAVVENA-VETEAEGEGEATVAAEE-AKPPWKT---- 111
Query: 693 RRPKLNQLMGYLNKQAVDAVEEKRP 619
R KL +MG LNK+A++ E RP
Sbjct: 112 -RVKLGDIMGLLNKKAIEVAETVRP 135