BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00002118
         (1963 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858609.1| hypothetical protein AMTR_s00071p00202370 [A...   243   2e-64
ref|XP_641568.1| SAP DNA-binding domain-containing protein [Dict...   117   2e-23
gb|EFA77474.1| SAP DNA-binding domain-containing protein [Polysp...   116   3e-23
ref|XP_003285236.1| hypothetical protein DICPUDRAFT_86618 [Dicty...   114   2e-22
ref|XP_004357361.1| SAP DNA-binding domain-containing protein [D...   105   5e-20
ref|XP_004353761.1| RNA recognition motif domain containing prot...    97   2e-17
ref|XP_005825174.1| hypothetical protein GUITHDRAFT_77389, parti...    78   1e-11
ref|XP_001638999.1| predicted protein [Nematostella vectensis] g...    75   1e-10
ref|XP_003387203.1| PREDICTED: ribonucleoprotein PTB-binding 1-l...    72   1e-09
ref|XP_004994149.1| hypothetical protein PTSG_12218 [Salpingoeca...    68   1e-08
ref|NP_001084988.1| ribonucleoprotein, PTB-binding 1 [Xenopus la...    65   8e-08

>ref|XP_006858609.1| hypothetical protein AMTR_s00071p00202370 [Amborella trichopoda]
            gi|548862718|gb|ERN20076.1| hypothetical protein
            AMTR_s00071p00202370 [Amborella trichopoda]
          Length = 986

 Score =  243 bits (619), Expect(2) = 2e-64
 Identities = 129/245 (52%), Positives = 160/245 (65%), Gaps = 9/245 (3%)
 Frame = +2

Query: 2    GQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQSESLLF 181
            G+VSSI F+NE++D  V+RF+S   + +     V+EKL NTQ G RTLL+E F+++SLLF
Sbjct: 299  GKVSSIAFENEKRDATVVRFDSAPGDNQ-LAATVQEKLHNTQLGVRTLLVEAFRADSLLF 357

Query: 182  IGNLTPDIDDNALRQMFEKHGHIERAFVLFNAXXXXXXXXXX---------AAKSAMGNI 334
            +GNLTPDIDD++LR MFE HG +ERAFVL NA                   AAK+ MG +
Sbjct: 358  VGNLTPDIDDSSLRTMFEPHGKVERAFVLRNAAGQSKGYGFIEYSLKSQAIAAKTTMGVV 417

Query: 335  SMDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGLGD 514
            +MDGRVLRVEWSDC+ + DMFS+VLFVDR+ K  PN E  +R+LF QYGKV+DC L +G 
Sbjct: 418  NMDGRVLRVEWSDCKNIEDMFSTVLFVDRISKHMPNPELALRSLFGQYGKVKDCFLPIGI 477

Query: 515  NNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKSPQSYKLRFGNSSQSN 694
            N   RG            DKAH  LDG+   G  IRVSFANP+KS QSYK R GN   + 
Sbjct: 478  NGNIRGFGFIDFFHSACADKAHIALDGHELGGLNIRVSFANPSKSAQSYKQRLGNQGPAQ 537

Query: 695  NFANM 709
             F  M
Sbjct: 538  AFGGM 542



 Score = 32.3 bits (72), Expect(2) = 2e-64
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +3

Query: 786  MQYGRGSHVGKPNNQGHAS--ASGMLVTNTGPTGMMGRPP-MNMLSRRANATG-GNMPPL 953
            M Y RG+ +G    + +     +G+L       G+MGRPP M  +S+R   +G GN+   
Sbjct: 583  MAYNRGTPMGPRILEQNVMDRGNGILSAGAPMAGVMGRPPFMGNISQRQGMSGLGNLASA 642

Query: 954  HPPSAQGHGPPNPPAIAQ 1007
                 QG  P N  A AQ
Sbjct: 643  QHFINQGTYPSNLAAAAQ 660


>ref|XP_641568.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
            AX4] gi|60469605|gb|EAL67594.1| SAP DNA-binding
            domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1009

 Score =  117 bits (292), Expect = 2e-23
 Identities = 76/232 (32%), Positives = 122/232 (52%), Gaps = 13/232 (5%)
 Frame = +2

Query: 2    GQVSSIVFDNERKDTAVIRF-NSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQ-SESL 175
            G+V +I ++  +KD A+++  N T++         KEKL N++    TL I     ++SL
Sbjct: 351  GKVHTITYEGSKKDFAIVQMENHTIA---------KEKLNNSKLKNCTLSITDIPLADSL 401

Query: 176  LFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA----------XXXXXXXXXXAAKSAM 325
            LF+GNL  D+    L++MFEKHG I+R  ++ N                      AKS++
Sbjct: 402  LFVGNLGNDVGKEQLKKMFEKHGTIDRIILIKNRRTGENKGYAFIDYRTKLQASTAKSSL 461

Query: 326  GNISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHL 502
            G+I  + R LRV+W++ C  +  M S  +FVDRLP+   +V   +R +FS +GK++DC++
Sbjct: 462  GSIVFNRRTLRVDWAENCNTMESMHSKTIFVDRLPRSFADVP-ILRKVFSPFGKIKDCNV 520

Query: 503  GLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKSPQS 658
                    RG            +KA  M++    +G+ IRV+FANP+K   S
Sbjct: 521  VPNYYGQPRGFAFIDYNNVEDAEKAQRMMNEKDLKGYKIRVNFANPSKPGHS 572


>gb|EFA77474.1| SAP DNA-binding domain-containing protein [Polysphondylium pallidum
           PN500]
          Length = 836

 Score =  116 bits (291), Expect = 3e-23
 Identities = 79/230 (34%), Positives = 122/230 (53%), Gaps = 15/230 (6%)
 Frame = +2

Query: 2   GQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQ-SESLL 178
           G+V +I FD  ++D AV+       E +     VKEKL  T+    TL I     S++LL
Sbjct: 332 GKVMNITFDGPKRDIAVV-----CMENQQAHNSVKEKLNGTKLKNCTLNISEMPISDTLL 386

Query: 179 FIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA----------XXXXXXXXXXAAKSAMG 328
           FIGNL P++    LR+MFEK+G ++RA V+ N                     AAKS++G
Sbjct: 387 FIGNLGPEVGREQLRKMFEKYGEVDRAIVMKNKRSGESKGYGFIDFRTKLQANAAKSSLG 446

Query: 329 NISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKD--DPNVEGNIRTLFSQYGKVRDCH 499
           +   +GR LRV+W+D C  +  M S  +F+DRL ++  D  +   +R LF+++GK+RDC+
Sbjct: 447 STKYNGRNLRVDWADSCSTLELMHSKTIFIDRLLRNFVDRTI---LRKLFTKFGKIRDCN 503

Query: 500 LGLGDN-NMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAK 646
           +    N    RG            +KA + ++    +G+ IRVSF NP++
Sbjct: 504 VFPNPNTGQPRGFAFIDYELVEDAEKAQKAMNDRDIQGYPIRVSFGNPSR 553


>ref|XP_003285236.1| hypothetical protein DICPUDRAFT_86618 [Dictyostelium purpureum]
            gi|325084778|gb|EGC38198.1| hypothetical protein
            DICPUDRAFT_86618 [Dictyostelium purpureum]
          Length = 1002

 Score =  114 bits (284), Expect = 2e-22
 Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 18/249 (7%)
 Frame = +2

Query: 2    GQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQ-SESLL 178
            G+V +  +++ +KD+A+++  +         +Q KEKL  T+    TL I     ++SLL
Sbjct: 359  GKVHTFTYESPKKDSAIVQMEN--------YQQAKEKLSGTKLKNCTLTITEIPLADSLL 410

Query: 179  FIGNLTPDIDDNALRQMFEKHGHIERAFVL----------FNAXXXXXXXXXXAAKSAMG 328
            F+GNL  +I    L+++FEK+G ++R  ++          +            +AK+++G
Sbjct: 411  FVGNLGFEITKEQLKKIFEKYGDVDRIIIMKSKRSGENKGYAFIDYRTKLQANSAKTSLG 470

Query: 329  NISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLG 505
            + S + R +RV+W++ C  +  + S  +FVDRLP+   ++   ++ LFS +GK++DC++ 
Sbjct: 471  SFSFNRRTIRVDWAENCNSLESLHSKTIFVDRLPRSFADIP-ILKKLFSPFGKIKDCNVV 529

Query: 506  LGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKS------PQSYKL 667
                   RG            +KA  +++    RG+ IRV+FANPAK+      PQ+   
Sbjct: 530  PNQYGQQRGFAFIDYTTVDEAEKAQRLMNDKDLRGYKIRVNFANPAKAGHILIKPQAQSR 589

Query: 668  RFGNSSQSN 694
                  QSN
Sbjct: 590  NEHKGVQSN 598


>ref|XP_004357361.1| SAP DNA-binding domain-containing protein [Dictyostelium
           fasciculatum] gi|328870525|gb|EGG18899.1| SAP
           DNA-binding domain-containing protein [Dictyostelium
           fasciculatum]
          Length = 927

 Score =  105 bits (263), Expect = 5e-20
 Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 12/227 (5%)
 Frame = +2

Query: 2   GQVSSIVFDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTL-LIEPFQSESLL 178
           G+V  + FD  ++D AV+     + E +   + VK+KL  T+    TL +I+    ++LL
Sbjct: 290 GKVLDLKFDGIKRDIAVV-----IMENQQTSQLVKDKLNGTKLKNCTLNIIDMPIQDTLL 344

Query: 179 FIGNLTPDIDDNALRQMFEKHGHIERAFVLFNA----------XXXXXXXXXXAAKSAMG 328
           F+GNL P++  ++LR+MFEK+G  +R  ++ N                     AAK+++G
Sbjct: 345 FVGNLGPEMTKDSLRKMFEKYGEPDRVILMKNRRTGESKGYGFVDYRTRLQANAAKASLG 404

Query: 329 NISMDGRVLRVEWSD-CRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLG 505
           + ++ GRVLRV+W++ C  +  M S  +FVD+L K   +V   +  LFS +GK+++C + 
Sbjct: 405 STTVSGRVLRVDWAETCSTLESMHSKTIFVDKLQKQYVDV-AILTKLFSPFGKIKECSIP 463

Query: 506 LGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAK 646
           L      +G            +KA + ++    + + IRVSF NP+K
Sbjct: 464 LAGQP--KGFAFIDYESVEDAEKAQKTMNDKELQEYKIRVSFGNPSK 508


>ref|XP_004353761.1| RNA recognition motif domain containing protein [Acanthamoeba
           castellanii str. Neff] gi|440803326|gb|ELR24233.1| RNA
           recognition motif domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 647

 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
 Frame = +2

Query: 2   GQVSSIVFDNERKDTAVIRFNSTVSEGEG--FLEQ-VKEKLQNTQFGERTLLIEPFQSES 172
           G+V  +V +  R+D  V+R     ++     F E  ++ K +  Q  + TL       E 
Sbjct: 176 GKVHGLVVEPSRRDVVVVRMPHDAAQKAKAHFAEHPLRVKDKELQASDATL-------EC 228

Query: 173 LLFIGNLTPDIDDNALRQMFEKHGHIERAFVL----------FNAXXXXXXXXXXAAKSA 322
            LF+GNL  D++   LR +F+ HG  ER  V+          +            AAK+ 
Sbjct: 229 FLFVGNLNEDVEPEHLRSLFQAHGEPERTIVMRSTATGRKKGYGFVEMRTKAQAGAAKAL 288

Query: 323 MGNISMDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHL 502
           +G  +  GR LR++W    K+ ++ S VLFVD+LP +  +  G +R LF ++G V++ ++
Sbjct: 289 LGATNFHGRSLRIDWCRLGKLEELHSPVLFVDKLPPNFTDYNG-LRQLFLKHGTVKNINV 347

Query: 503 GLGD-NNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKS 649
            +   N++ RG            +KA + L    FRG  IR+SF NPAK+
Sbjct: 348 PVNPMNSIPRGFAFVTLSSAEEAEKARDALHDTEFRGSHIRISFGNPAKA 397


>ref|XP_005825174.1| hypothetical protein GUITHDRAFT_77389, partial [Guillardia theta
           CCMP2712] gi|428169258|gb|EKX38194.1| hypothetical
           protein GUITHDRAFT_77389, partial [Guillardia theta
           CCMP2712]
          Length = 169

 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
 Frame = +2

Query: 176 LFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAXXXXXXXXXXAAKSA---------MG 328
           +F+GN+ PD  +  + ++F+K G  +R+ V+ +A              A         M 
Sbjct: 12  VFVGNIHPDTKEEEVIELFKKFGKPDRSIVMRSAEGISLGYGFLEFSDASQARKAVEGMN 71

Query: 329 NISMDGRVLRVEWSDCRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGL 508
            I    R LRV+++DCR  +  FS ++F+D+LP+   ++E  +R++FS  G + DCHL  
Sbjct: 72  LIVYKERQLRVDFADCRSKSSQFSPIVFIDQLPRTFVDLE-KLRSIFSPKGAMVDCHLAK 130

Query: 509 GDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRV 625
           G  N+ RG              A   L+GY   G  IRV
Sbjct: 131 GPGNVTRGFAFVEYETHDSAYSAFRELNGYKLEGQPIRV 169


>ref|XP_001638999.1| predicted protein [Nematostella vectensis]
           gi|156226124|gb|EDO46936.1| predicted protein
           [Nematostella vectensis]
          Length = 301

 Score = 75.1 bits (183), Expect = 1e-10
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
 Frame = +2

Query: 38  KDTAVIRFNSTVSEGEGFLEQVKEK---LQNTQFGERTLLIEPFQSESLLFIGNLTPDID 208
           KD  +    +T +   G +EQ +     L   ++ ++TL + P   ESLLF+GNL  +  
Sbjct: 66  KDLVIGHVKNTATVVFGGIEQARSVISFLNTCKYHDKTLNVSPAPPESLLFVGNLPFEFT 125

Query: 209 DNALRQMFEKHGHIERAFVL----------FNAXXXXXXXXXXAAKSAMGNIS---MDGR 349
           +     +   +G+IER F++          +             AK  + N +   + GR
Sbjct: 126 ETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQLLNTASKYIGGR 185

Query: 350 VLRVEWSDCRKV--ADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGLGD-NN 520
           +LRV +++   +  AD+ S  LFVDRLP+D  N  G I+ LFSQ G V    + +   N 
Sbjct: 186 ILRVAFAESNLLTYADVHSRTLFVDRLPRDFKN-GGLIKELFSQTGNVTFAQVAINPANG 244

Query: 521 MFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKSPQS 658
             RG            +K     +G    G  IRV++ +P ++  S
Sbjct: 245 GSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVAYGSPGRTGAS 290


>ref|XP_003387203.1| PREDICTED: ribonucleoprotein PTB-binding 1-like [Amphimedon
           queenslandica]
          Length = 454

 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
 Frame = +2

Query: 167 ESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVLFNAXXXXXXXXXXA----------AK 316
           +SLLFIGN+        LR++F   G + R  ++++                      AK
Sbjct: 112 DSLLFIGNIPLWFKKENLRELFSPLGTVLRCLIIYSMSRGLSKGYGFVEFSTRDEALLAK 171

Query: 317 SAMGNISMDGRVLRVEWSD--CRKVADMFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVR 490
             M   ++ GR LRV+++D   +  AD+ S  LFVDRLPK   N +  ++ +F  YG + 
Sbjct: 172 HIMATKAIGGRHLRVDFADNGMQTTADLHSKTLFVDRLPKTFKN-DLVLQKMFEVYGTIN 230

Query: 491 DCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAK 646
            C + +  N   R             ++A   L+GY F+G  IRVS+  P +
Sbjct: 231 FCQVAIAPNGCPRCFAFIDFNSSFSAEEAQFNLNGYSFQGQEIRVSYGMPCR 282


>ref|XP_004994149.1| hypothetical protein PTSG_12218 [Salpingoeca rosetta]
           gi|326427548|gb|EGD73118.1| hypothetical protein
           PTSG_12218 [Salpingoeca rosetta]
          Length = 758

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 12/198 (6%)
 Frame = +2

Query: 101 VKEKLQNTQFGERTLLIEPFQSESLLFIGNLTPDIDDNALRQMFEKHGHIERAFVL---- 268
           ++ +++   F +R +   P +++ LLF+GNL+  +    L ++    G I RAFV+    
Sbjct: 1   MRSRIEGAWFNDRHITTTPARTDGLLFLGNLSKRMTPARLIELGSPSGQICRAFVMVDEA 60

Query: 269 ------FNAXXXXXXXXXXAAKSAMGNISMDGRVLRVEWSD--CRKVADMFSSVLFVDRL 424
                 +             A++ + +  +D R +RV+        ++   S  LF+DRL
Sbjct: 61  TLEGQGYGFLEFVNKATAVKARADLASRVVDDRPIRVDLMKPVDNDISHFRSRTLFIDRL 120

Query: 425 PKDDPNVEGNIRTLFSQYGKVRDCHLGLGDNNMFRGXXXXXXXXXXXXDKAHEMLDGYCF 604
           PK   NV   +R +F   GKV  C L +  N + RG              A  + +G   
Sbjct: 121 PKTLTNV-NKLRAMFESAGKVDFCQLVM-SNGVCRGFAFVDMASYHDALSARRLFNGAVV 178

Query: 605 RGHTIRVSFANPAKSPQS 658
            G TIRVSF +P K+  S
Sbjct: 179 EGATIRVSFGHPQKTGAS 196


>ref|NP_001084988.1| ribonucleoprotein, PTB-binding 1 [Xenopus laevis]
           gi|47682299|gb|AAH70699.1| MGC83237 protein [Xenopus
           laevis]
          Length = 694

 Score = 65.5 bits (158), Expect = 8e-08
 Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 12/224 (5%)
 Frame = +2

Query: 23  FDNERKDTAVIRFNSTVSEGEGFLEQVKEKLQNTQFGERTLLIEPFQSESLLFIGNLTPD 202
           F ++ K TA +    T+  GE   E    +   T   +R + ++   +++LL I NL+P 
Sbjct: 94  FVDKYKGTAFV----TLLNGEQ-AESAIRRFHQTHIRDREISVQLQPTDALLCIANLSPT 148

Query: 203 IDDNALRQMFEKHGHIERAFVLFNAXXXXXXXXXXA----------AKSAMGNISMDGRV 352
                   +    G++ER F+++++                     AKS +    +  R 
Sbjct: 149 YTQQQFEDLVRPFGNLERCFLIYSSTTGRPKGYGFVEYMKKDSASRAKSDLLGRQLGSRT 208

Query: 353 LRVEWSDCRKVAD--MFSSVLFVDRLPKDDPNVEGNIRTLFSQYGKVRDCHLGLGDNNMF 526
           L V WSD  ++    + S  L V++L + D    G++R  FS+      C L  G +N++
Sbjct: 209 LYVHWSDVNQLTYELLHSHCLLVEQLQECDL---GDLREAFSKISAPSFCQLAYGQDNLY 265

Query: 527 RGXXXXXXXXXXXXDKAHEMLDGYCFRGHTIRVSFANPAKSPQS 658
           +G            +   + +DG    G  +RVSF  P  + +S
Sbjct: 266 KGFAVVEYESDTVTEMVQQQMDGSSVAGSRVRVSFCAPGPAGRS 309