BLASTX nr result
ID: Ephedra25_contig00002018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00002018
(598 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR18205.1| unknown [Picea sitchensis] 127 2e-27
gb|ABK21372.1| unknown [Picea sitchensis] 127 2e-27
gb|EOY13201.1| RNA-binding family protein [Theobroma cacao] 115 9e-24
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207... 114 3e-23
gb|ACN41154.1| unknown [Picea sitchensis] 112 6e-23
ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleop... 112 8e-23
gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus pe... 112 1e-22
gb|AFC89654.1| RBP42 [Elaeis guineensis] 112 1e-22
gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus... 111 1e-22
ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutr... 111 1e-22
ref|XP_004294103.1| PREDICTED: polyadenylate-binding protein 2-l... 111 1e-22
ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleop... 110 2e-22
ref|XP_002316830.2| hypothetical protein POPTR_0011s07480g [Popu... 110 3e-22
ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [A... 110 3e-22
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 110 3e-22
ref|XP_004304845.1| PREDICTED: ELAV-like protein 1-like [Fragari... 110 4e-22
gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris] 109 5e-22
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi... 109 6e-22
ref|XP_004293936.1| PREDICTED: heterogeneous nuclear ribonucleop... 109 6e-22
ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arab... 109 6e-22
>gb|ABR18205.1| unknown [Picea sitchensis]
Length = 382
Score = 127 bits (320), Expect = 2e-27
Identities = 66/117 (56%), Positives = 80/117 (68%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K+ + A++EPSKKID+R+TV + Q+ RKIYV GLP DVD L
Sbjct: 204 KSFAGVVAALKEPSKKIDDRMTVCNLSTGVSAPDS---QQVHGRKIYVGGLPNDVDSAKL 260
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
VKLFSQYGEIEEGPLGFDK++GK KGF FFIYK+ + A AL++P K FD TLTCK
Sbjct: 261 VKLFSQYGEIEEGPLGFDKKTGKSKGFAFFIYKSEKSANNALDEPMKTFDGATLTCK 317
Score = 63.5 bits (153), Expect = 4e-08
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK++V GL + L +FS YGE+E+ + D+ SGK KGF F +K+ G AL+
Sbjct: 155 RKLFVRGLGWHTKPETLNSVFSAYGEVEKADIVMDRNSGKSKGFGFVTFKSFAGVVAALK 214
Query: 310 QPSKKFDDFTLTC 348
+PSKK DD C
Sbjct: 215 EPSKKIDDRMTVC 227
>gb|ABK21372.1| unknown [Picea sitchensis]
Length = 265
Score = 127 bits (320), Expect = 2e-27
Identities = 66/117 (56%), Positives = 80/117 (68%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K+ + A++EPSKKID+R+TV + Q+ RKIYV GLP DVD L
Sbjct: 87 KSFAGVVAALKEPSKKIDDRMTVCNLSTGVSAPDS---QQVHGRKIYVGGLPNDVDSAKL 143
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
VKLFSQYGEIEEGPLGFDK++GK KGF FFIYK+ + A AL++P K FD TLTCK
Sbjct: 144 VKLFSQYGEIEEGPLGFDKKTGKSKGFAFFIYKSEKSANNALDEPMKTFDGATLTCK 200
Score = 63.5 bits (153), Expect = 4e-08
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK++V GL + L +FS YGE+E+ + D+ SGK KGF F +K+ G AL+
Sbjct: 38 RKLFVRGLGWHTKPETLNSVFSAYGEVEKADIVMDRNSGKSKGFGFVTFKSFAGVVAALK 97
Query: 310 QPSKKFDDFTLTC 348
+PSKK DD C
Sbjct: 98 EPSKKIDDRMTVC 110
>gb|EOY13201.1| RNA-binding family protein [Theobroma cacao]
Length = 429
Score = 115 bits (288), Expect = 9e-24
Identities = 58/117 (49%), Positives = 74/117 (63%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K + AL A++EPSKKID RVTV +RKIYVA +P D+ D L
Sbjct: 125 KHVDGALLALKEPSKKIDGRVTVTQLAAAGNSGTNNNPVDVHMRKIYVANVPYDMPADKL 184
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
+ F+QYGEIEEGPLGFDK++GK +GF F+YKTA+GA+ AL +P K D + CK
Sbjct: 185 LGHFAQYGEIEEGPLGFDKQTGKSRGFALFVYKTADGAQAALVEPVKNIDGRQMNCK 241
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D D L LFS YGE+EE + DK +GK KG+ F +K +GA AL+
Sbjct: 76 RKLFIRGLGWDTTTDGLRSLFSVYGELEEAVVILDKATGKSKGYGFVTFKHVDGALLALK 135
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 136 EPSKKID 142
>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
gi|449483196|ref|XP_004156519.1| PREDICTED:
uncharacterized protein LOC101231665 [Cucumis sativus]
Length = 434
Score = 114 bits (284), Expect = 3e-23
Identities = 58/118 (49%), Positives = 72/118 (61%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K + AL A++EPSK ID RVTV LRKIYVA +P D+ D L
Sbjct: 119 KHVDGALLALKEPSKTIDGRVTVTQLAAVGISGQNSNAADLSLRKIYVANVPMDMPADKL 178
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCKY 354
+ FS YGEIEEGPLGFDK++GKC+G+ F+YK EGA+ AL P K D L+CK+
Sbjct: 179 LAHFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKF 236
Score = 62.8 bits (151), Expect = 7e-08
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D + L LFS YGE+EE + DK +GK KG+ F +K +GA AL+
Sbjct: 70 RKLFIRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALK 129
Query: 310 QPSKKFD 330
+PSK D
Sbjct: 130 EPSKTID 136
>gb|ACN41154.1| unknown [Picea sitchensis]
Length = 446
Score = 112 bits (281), Expect = 6e-23
Identities = 57/117 (48%), Positives = 73/117 (62%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K + AL A++EPSKKID R+TV+ RKIYV +P D+ D L
Sbjct: 113 KHMDGALNALKEPSKKIDGRMTVSQLASAGSQPAQPAADVSA-RKIYVGNVPMDMAADRL 171
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
+ LFSQYGEIEEGPLGFDK+SGK +GF FI+K+ + K+ALE+P K D + CK
Sbjct: 172 LSLFSQYGEIEEGPLGFDKQSGKSRGFALFIFKSVDATKRALEEPMKTIDGHQMFCK 228
Score = 69.7 bits (169), Expect = 6e-10
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK++V GL D + + L LFSQ+GE+EEG + DK +GK KG+ F +K +GA AL+
Sbjct: 64 RKLFVRGLGWDTNTESLKALFSQFGELEEGVVIMDKNTGKSKGYGFVTFKHMDGALNALK 123
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 124 EPSKKID 130
>ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform X1
[Glycine max] gi|571493430|ref|XP_006592544.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein A3
isoform X2 [Glycine max]
gi|571493432|ref|XP_006592545.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 isoform X3
[Glycine max]
Length = 437
Score = 112 bits (280), Expect = 8e-23
Identities = 59/112 (52%), Positives = 70/112 (62%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHLVKLFS 195
AL A+REPSK+ID RVTV LRKIYVA +P D+ D L+ FS
Sbjct: 125 ALLALREPSKRIDGRVTVTQLAAAGNSALNANAVDVALRKIYVANVPPDLPADKLLAHFS 184
Query: 196 QYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
YGEIEEGPLGFDK++GK KGF F+YK+ EGAK AL P K + L+CK
Sbjct: 185 VYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAKAALIDPMKTVEGRQLSCK 236
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D D L LFS YG++EE + DK +GK KG+ F ++ +GA AL
Sbjct: 71 RKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALR 130
Query: 310 QPSKKFD 330
+PSK+ D
Sbjct: 131 EPSKRID 137
>gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus persica]
Length = 440
Score = 112 bits (279), Expect = 1e-22
Identities = 59/115 (51%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKK---ELRKIYVAGLPEDVDVDHLVK 186
AL A++EPSKKID R+TV LRKIYVA +P D+ D L+
Sbjct: 126 ALLALKEPSKKIDGRMTVTQLAAAGNSSSNVSSNNAADVSLRKIYVANVPYDMPADKLLA 185
Query: 187 LFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
FS YGEIEEGPLGFDK++GKCKG+ F+YKT EGA+ AL P K + LTCK
Sbjct: 186 HFSFYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPVKNIEGRQLTCK 240
Score = 60.8 bits (146), Expect = 3e-07
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D + L LFS YGE+EE + DK +GK +G+ F ++ +GA AL+
Sbjct: 72 RKLFIRGLGWDTTTEGLRALFSAYGELEEAIVILDKVTGKSRGYGFVTFRHVDGALLALK 131
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 132 EPSKKID 138
>gb|AFC89654.1| RBP42 [Elaeis guineensis]
Length = 413
Score = 112 bits (279), Expect = 1e-22
Identities = 57/115 (49%), Positives = 70/115 (60%)
Frame = +1
Query: 7 LGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHLVK 186
+ AL A++EPSKKID R+TV LRKIYV +P D+ D L+
Sbjct: 120 IDGALLALKEPSKKIDGRMTVTQLAAAGTTAAAPPAIDVSLRKIYVGNVPADMPSDRLLA 179
Query: 187 LFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
FS YGEIEEGPLGFDK++GK +GF F+YKTAEGA +L P+K D L CK
Sbjct: 180 HFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCK 234
Score = 62.0 bits (149), Expect = 1e-07
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL + + L LFS YGE+EE + DK +GK KG+ F ++ +GA AL+
Sbjct: 69 RKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGALLALK 128
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 129 EPSKKID 135
>gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus vulgaris]
Length = 438
Score = 111 bits (278), Expect = 1e-22
Identities = 58/112 (51%), Positives = 70/112 (62%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHLVKLFS 195
A+ A+REPSK+ID RVTV LRKIYVA +P D+ D L+ FS
Sbjct: 122 AILALREPSKRIDGRVTVTQLAAAGNSPSNANAADVALRKIYVANVPPDLPADKLLAHFS 181
Query: 196 QYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
YGEIEEGPLGFDK++GK KGF F+YKT EGA+ AL P K + L+CK
Sbjct: 182 VYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQAALLDPVKTVEGRQLSCK 233
Score = 62.8 bits (151), Expect = 7e-08
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK++V GL D D L LFS YGE+EE + DK +GK KG+ F ++ +GA AL
Sbjct: 68 RKLFVRGLGWDTTTDGLRSLFSAYGELEEAVVIVDKATGKSKGYGFVTFRHVDGAILALR 127
Query: 310 QPSKKFD 330
+PSK+ D
Sbjct: 128 EPSKRID 134
>ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutrema salsugineum]
gi|557089387|gb|ESQ30095.1| hypothetical protein
EUTSA_v10011518mg [Eutrema salsugineum]
Length = 421
Score = 111 bits (278), Expect = 1e-22
Identities = 58/117 (49%), Positives = 70/117 (59%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K + AL A++EPSKKID RVTV +RKIYVA +P D+ D L
Sbjct: 124 KHVDGALLALKEPSKKIDGRVTVTQLAAAGNQGATAHVSDISMRKIYVANVPFDMPADRL 183
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
+ F YG+IEEGPLGFDK +GK +GF F+YKTAEGA+ AL P K D L CK
Sbjct: 184 LNQFLAYGDIEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKNLQCK 240
Score = 60.1 bits (144), Expect = 4e-07
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL + + L LFS YG++EE + DK + K KG+ F +K +GA AL+
Sbjct: 75 RKLFIRGLAAETTTEGLRSLFSNYGDLEEAIVILDKVTAKSKGYGFVTFKHVDGALLALK 134
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 135 EPSKKID 141
>ref|XP_004294103.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 434
Score = 111 bits (278), Expect = 1e-22
Identities = 58/126 (46%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKK--------ELRKIYVAGLP 156
K + AA A++EPSKKID R+TV LRKIYVA +P
Sbjct: 121 KHVDAAYLALKEPSKKIDGRMTVTQLAAAGNQGGGGGGSTTASVNPVDVSLRKIYVANVP 180
Query: 157 EDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDF 336
++ D L+ F+QYGE+EEGPLGFDK++GKCKG+ F+YKT EGA+KAL P K +
Sbjct: 181 YEMAADKLLAHFAQYGEVEEGPLGFDKQTGKCKGYALFVYKTPEGAQKALVDPIKNIEGR 240
Query: 337 TLTCKY 354
L CK+
Sbjct: 241 QLNCKF 246
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D + L LFS YGE+EE + DK +GK KG+ F +K + A AL+
Sbjct: 72 RKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKNTGKSKGYGFVTFKHVDAAYLALK 131
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 132 EPSKKID 138
>ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X1 [Glycine max]
gi|571461885|ref|XP_006582134.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X2 [Glycine max]
Length = 444
Score = 110 bits (276), Expect = 2e-22
Identities = 58/112 (51%), Positives = 70/112 (62%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHLVKLFS 195
AL A+REPSK+ID RVTV LRKIYVA +P D+ D L+ FS
Sbjct: 125 ALLALREPSKRIDGRVTVTQLAAAGNSASNVNPADVALRKIYVANVPPDLPADKLLAHFS 184
Query: 196 QYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
YGEIEEGPLGFDK++GK KGF F+YK+ EGA+ AL P K + L+CK
Sbjct: 185 VYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCK 236
Score = 60.5 bits (145), Expect = 3e-07
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D D L LFS +G++EE + DK +GK KG+ F ++ +GA AL
Sbjct: 71 RKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALR 130
Query: 310 QPSKKFD 330
+PSK+ D
Sbjct: 131 EPSKRID 137
>ref|XP_002316830.2| hypothetical protein POPTR_0011s07480g [Populus trichocarpa]
gi|550327872|gb|EEE97442.2| hypothetical protein
POPTR_0011s07480g [Populus trichocarpa]
Length = 368
Score = 110 bits (275), Expect = 3e-22
Identities = 56/118 (47%), Positives = 70/118 (59%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K + AA+ ++REPSKKID R+TV LRK+YV +P +V + L
Sbjct: 124 KHVDAAMLSIREPSKKIDGRITVTQLASNNSSTTDV-----SLRKVYVGNVPFEVSSERL 178
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCKY 354
+ FS YGEIEEGPLGFDK +GK KGF F IYK EGAK A+ P K D + CK+
Sbjct: 179 LGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKNEEGAKAAIADPMKNIDGHQVVCKF 236
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +1
Query: 127 LRKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKAL 306
LRK+++ GL + + L LFS GE+EE + DK +GK KGF F +K + A ++
Sbjct: 74 LRKLFIRGLSSETTSETLRILFSSSGELEEAIVIHDKNTGKSKGFGFITFKHVDAAMLSI 133
Query: 307 EQPSKKFD 330
+PSKK D
Sbjct: 134 REPSKKID 141
>ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [Amborella trichopoda]
gi|548856064|gb|ERN13920.1| hypothetical protein
AMTR_s00021p00110500 [Amborella trichopoda]
Length = 409
Score = 110 bits (275), Expect = 3e-22
Identities = 56/117 (47%), Positives = 71/117 (60%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHL 180
K + AL A++EPSKKID R+TV RKI+V +P D+ D L
Sbjct: 111 KHIDGALNALKEPSKKIDGRMTVTQLAASGNQPSVPSVDVSA-RKIFVGNVPFDMPADRL 169
Query: 181 VKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
+ F QYGE+EEGPLGFDK++GK +GF F+YKT E AK ALE+P+K D L CK
Sbjct: 170 LHHFLQYGEVEEGPLGFDKQTGKSRGFALFVYKTVEAAKAALEEPNKSVDGHQLVCK 226
Score = 70.1 bits (170), Expect = 4e-10
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D + L LFSQYGEIEEG + DK +GK KG+ F +K +GA AL+
Sbjct: 62 RKLFIRGLGWDTTTESLRTLFSQYGEIEEGVVILDKATGKSKGYGFVTFKHIDGALNALK 121
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 122 EPSKKID 128
>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein
VITISV_017556 [Vitis vinifera]
Length = 449
Score = 110 bits (275), Expect = 3e-22
Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 2/119 (1%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKE--LRKIYVAGLPEDVDVD 174
K + AL A++EPSKKID R+TV + +RKIYVA +P D+ D
Sbjct: 120 KHVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVPVDMPAD 179
Query: 175 HLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
L+ FS YGEIEEGPLGFDK++GK +GF F+YKTAE A+ AL P+K D L CK
Sbjct: 180 RLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCK 238
Score = 62.0 bits (149), Expect = 1e-07
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D + L +LFS YGE+EE + DK + K KG+ F +K +GA AL+
Sbjct: 71 RKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGALLALK 130
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 131 EPSKKID 137
>ref|XP_004304845.1| PREDICTED: ELAV-like protein 1-like [Fragaria vesca subsp. vesca]
Length = 434
Score = 110 bits (274), Expect = 4e-22
Identities = 57/123 (46%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Frame = +1
Query: 1 KTLGAALKAVREPSKKIDNR------VTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPED 162
KT AALKA+REP K I NR +V + RKIYV+G+P +
Sbjct: 155 KTRRAALKALREPKKTIGNRCASCQLASVGPGTNTNTAAPSGQSESYSGRKIYVSGVPHE 214
Query: 163 VDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTL 342
D + L LF ++GEIE GP+GFD ++GKC+GF F+YKT EGAKKALE+P K F+ L
Sbjct: 215 ADAEKLRALFVKFGEIETGPMGFDSQTGKCRGFALFLYKTVEGAKKALEEPVKVFEGHQL 274
Query: 343 TCK 351
C+
Sbjct: 275 NCQ 277
Score = 60.5 bits (145), Expect = 3e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RKI+V GL D + LV F +GE+E+ L DK +GK KG+ F ++KT A KAL
Sbjct: 106 RKIFVHGLGWDTTREVLVSAFEPFGEVEDSNLVMDKLTGKAKGYGFVLFKTRRAALKALR 165
Query: 310 QPSKKFDDFTLTCK 351
+P K + +C+
Sbjct: 166 EPKKTIGNRCASCQ 179
>gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris]
Length = 438
Score = 109 bits (273), Expect = 5e-22
Identities = 57/112 (50%), Positives = 69/112 (61%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHLVKLFS 195
A+ A+REPSK+ID RVTV LRKIYVA +P D+ D L+ FS
Sbjct: 122 AILALREPSKRIDGRVTVTQLAAAGNSASNANAADVALRKIYVANVPPDLPADKLLAHFS 181
Query: 196 QYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
YGEIEEGPLGFDK++GK KGF F+YK EGA+ AL P K + L+CK
Sbjct: 182 VYGEIEEGPLGFDKQTGKSKGFALFVYKNPEGAQAALLDPVKTVEGRQLSCK 233
Score = 62.8 bits (151), Expect = 7e-08
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK++V GL D D L LFS YGE+EE + DK +GK KG+ F ++ +GA AL
Sbjct: 68 RKLFVRGLGWDTTTDGLRSLFSAYGELEEAVVIVDKATGKSKGYGFVTFRHVDGAILALR 127
Query: 310 QPSKKFD 330
+PSK+ D
Sbjct: 128 EPSKRID 134
>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42572443|ref|NP_974317.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|75335116|sp|Q9LKA4.1|UBA2C_ARATH RecName:
Full=UBP1-associated protein 2C
gi|8777484|dbj|BAA97064.1| unnamed protein product
[Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|20259621|gb|AAM14167.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
AT3G15010 [Arabidopsis thaliana]
gi|332642081|gb|AEE75602.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332642082|gb|AEE75603.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 109 bits (272), Expect = 6e-22
Identities = 56/112 (50%), Positives = 68/112 (60%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHLVKLFS 195
AL A++EPSKKID RVTV +RKIYVA +P D+ D L+ F
Sbjct: 129 ALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFM 188
Query: 196 QYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
YG++EEGPLGFDK +GK +GF F+YKTAEGA+ AL P K D L CK
Sbjct: 189 AYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D + L LFS YG++EE + DK +GK KG+ F + +GA AL+
Sbjct: 75 RKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALK 134
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 135 EPSKKID 141
>ref|XP_004293936.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
[Fragaria vesca subsp. vesca]
Length = 353
Score = 109 bits (272), Expect = 6e-22
Identities = 58/116 (50%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKEL----RKIYVAGLPEDVDVDHLV 183
AL A+REPSKKID RVTV RKIYV +P D+ + L+
Sbjct: 127 ALIALREPSKKIDGRVTVTQYAAAGHSAPFSSSSNGSADVSARKIYVGTVPFDISSERLL 186
Query: 184 KLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
FS +GEIEEGPLGFDK +GK KGF FF+YKT EGA+ AL +P K D +TCK
Sbjct: 187 AAFSAFGEIEEGPLGFDKATGKSKGFAFFVYKTEEGARAALAEPMKNIDGHQVTCK 242
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +1
Query: 127 LRKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKAL 306
LRK++V GL D D L +FS +G+++E + FDK +GK KG+ F +K A+ A AL
Sbjct: 72 LRKLFVRGLSADTTTDSLRSVFSSFGDLDEAIVIFDKATGKSKGYGFVTFKHADEALIAL 131
Query: 307 EQPSKKFDDFTLTCKY 354
+PSKK D +Y
Sbjct: 132 REPSKKIDGRVTVTQY 147
>ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
lyrata] gi|297328748|gb|EFH59167.1| hypothetical protein
ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 109 bits (272), Expect = 6e-22
Identities = 56/112 (50%), Positives = 68/112 (60%)
Frame = +1
Query: 16 ALKAVREPSKKIDNRVTVAHXXXXXXXXXXXXXQKKELRKIYVAGLPEDVDVDHLVKLFS 195
AL A++EPSKKID RVTV +RKIYVA +P D+ D L+ F
Sbjct: 129 ALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFM 188
Query: 196 QYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALEQPSKKFDDFTLTCK 351
YG++EEGPLGFDK +GK +GF F+YKTAEGA+ AL P K D L CK
Sbjct: 189 AYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQTALADPVKVIDGKHLNCK 240
Score = 63.2 bits (152), Expect = 5e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +1
Query: 130 RKIYVAGLPEDVDVDHLVKLFSQYGEIEEGPLGFDKESGKCKGFTFFIYKTAEGAKKALE 309
RK+++ GL D + L+ LFS YG++EE + DK +GK KG+ F + +GA AL+
Sbjct: 75 RKLFIRGLAADTTTEGLLSLFSNYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALK 134
Query: 310 QPSKKFD 330
+PSKK D
Sbjct: 135 EPSKKID 141