BLASTX nr result

ID: Ephedra25_contig00001964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001964
         (591 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315172.1| Eukaryotic translation initiation factor 3 s...    60   3e-07
ref|XP_006355662.1| PREDICTED: eukaryotic translation initiation...    58   2e-06
ref|XP_002526864.1| eukaryotic translation initiation factor 3f,...    58   2e-06
ref|XP_006842532.1| hypothetical protein AMTR_s00077p00121720 [A...    58   2e-06
ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation...    58   2e-06
gb|ABK26006.1| unknown [Picea sitchensis]                              58   2e-06
ref|XP_004239934.1| PREDICTED: eukaryotic translation initiation...    57   3e-06
gb|EXB58177.1| Eukaryotic translation initiation factor 3 subuni...    57   4e-06
ref|XP_006435688.1| hypothetical protein CICLE_v10032098mg [Citr...    56   6e-06
ref|XP_006435687.1| hypothetical protein CICLE_v10032098mg [Citr...    56   6e-06
ref|XP_006435686.1| hypothetical protein CICLE_v10032098mg [Citr...    56   6e-06
ref|NP_001275804.1| putative eukaryotic translation initiation f...    56   8e-06
gb|AAL15890.1|AF417302_1 26S proteasome regulatory subunit S12 i...    56   8e-06

>ref|XP_002315172.1| Eukaryotic translation initiation factor 3 subunit 5 family protein
           [Populus trichocarpa] gi|118484603|gb|ABK94175.1|
           unknown [Populus trichocarpa]
           gi|222864212|gb|EEF01343.1| Eukaryotic translation
           initiation factor 3 subunit 5 family protein [Populus
           trichocarpa]
          Length = 287

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 29/55 (52%), Positives = 38/55 (69%)
 Frame = +3

Query: 345 FDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           F  REV NPIH+T++T        IK Y+++ LS GDRPL AQF++VPLDL  +E
Sbjct: 120 FYSREVPNPIHLTVDTGFSNGEGTIKAYVSVNLSLGDRPLAAQFQEVPLDLRMVE 174


>ref|XP_006355662.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Solanum tuberosum]
          Length = 285

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = +3

Query: 339 QRFDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           Q F  RE  NPIH+T++T  Q     IK ++++ LS GD+PL AQF+++PLDL  +E
Sbjct: 116 QEFYSRETSNPIHLTVDTGFQNGEASIKGFVSVHLSLGDQPLAAQFQEIPLDLRMVE 172


>ref|XP_002526864.1| eukaryotic translation initiation factor 3f, eif3f, putative
           [Ricinus communis] gi|223533763|gb|EEF35495.1|
           eukaryotic translation initiation factor 3f, eif3f,
           putative [Ricinus communis]
          Length = 287

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/55 (49%), Positives = 38/55 (69%)
 Frame = +3

Query: 345 FDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           F  REV NP+H+T++T  +     IK Y+++ LS GDR L AQF+++PLDL  LE
Sbjct: 120 FYSREVPNPVHLTVDTGFRNGEGTIKAYVSVNLSLGDRQLAAQFQEIPLDLRMLE 174


>ref|XP_006842532.1| hypothetical protein AMTR_s00077p00121720 [Amborella trichopoda]
           gi|548844618|gb|ERN04207.1| hypothetical protein
           AMTR_s00077p00121720 [Amborella trichopoda]
          Length = 284

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = +3

Query: 345 FDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           F  REV NP+H+T++T   +    IK Y+ + LS GDR L AQF++VPLDL  LE
Sbjct: 117 FYSREVANPVHLTVDTGFSSGEASIKAYVGVNLSVGDRQLAAQFQEVPLDLRMLE 171


>ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Cucumis sativus]
           gi|449517876|ref|XP_004165970.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit F-like [Cucumis
           sativus]
          Length = 285

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +3

Query: 345 FDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           F  REV NPIH+T++T  +     IK YI++ LS GDR L AQF+++PLDL  +E
Sbjct: 118 FYSREVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVE 172


>gb|ABK26006.1| unknown [Picea sitchensis]
          Length = 284

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = +3

Query: 339 QRFDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           Q F  REV NP+H+T++TS   ++  IK Y++  +S GDR L AQF ++PLDL  +E
Sbjct: 115 QDFYAREVTNPVHLTVDTSFLNEQATIKAYVSTTISLGDRQLAAQFHEIPLDLRMVE 171


>ref|XP_004239934.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Solanum lycopersicum]
          Length = 285

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = +3

Query: 339 QRFDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           Q F  RE  NPIH+T++T  Q     IK ++++ LS GD+PL AQF+++PLDL  +E
Sbjct: 116 QEFYSRESSNPIHLTVDTGFQNGEASIKGFVSVHLSLGDQPLAAQFQEIPLDLRMVE 172


>gb|EXB58177.1| Eukaryotic translation initiation factor 3 subunit F [Morus
           notabilis]
          Length = 215

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = +3

Query: 330 QVEQRFDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           Q+   F  REV NP+H+T++T        IK Y+++ LS GDR + AQF+++PLDL  +E
Sbjct: 96  QLIHEFYSREVPNPVHLTVDTGFNNGEGTIKAYVSVNLSLGDRQIAAQFQEIPLDLRMVE 155


>ref|XP_006435688.1| hypothetical protein CICLE_v10032098mg [Citrus clementina]
           gi|567886334|ref|XP_006435689.1| hypothetical protein
           CICLE_v10032098mg [Citrus clementina]
           gi|557537884|gb|ESR48928.1| hypothetical protein
           CICLE_v10032098mg [Citrus clementina]
           gi|557537885|gb|ESR48929.1| hypothetical protein
           CICLE_v10032098mg [Citrus clementina]
          Length = 327

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 24/52 (46%), Positives = 37/52 (71%)
 Frame = +3

Query: 354 REV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           REV NP+H+T++T  +     +K Y+++ LS GDR L AQF+++PLDL  +E
Sbjct: 163 REVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIE 214


>ref|XP_006435687.1| hypothetical protein CICLE_v10032098mg [Citrus clementina]
           gi|557537883|gb|ESR48927.1| hypothetical protein
           CICLE_v10032098mg [Citrus clementina]
          Length = 262

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 24/52 (46%), Positives = 37/52 (71%)
 Frame = +3

Query: 354 REV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           REV NP+H+T++T  +     +K Y+++ LS GDR L AQF+++PLDL  +E
Sbjct: 163 REVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIE 214


>ref|XP_006435686.1| hypothetical protein CICLE_v10032098mg [Citrus clementina]
           gi|557537882|gb|ESR48926.1| hypothetical protein
           CICLE_v10032098mg [Citrus clementina]
          Length = 230

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 24/52 (46%), Positives = 37/52 (71%)
 Frame = +3

Query: 354 REV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           REV NP+H+T++T  +     +K Y+++ LS GDR L AQF+++PLDL  +E
Sbjct: 163 REVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIE 214


>ref|NP_001275804.1| putative eukaryotic translation initiation factor 1 [Citrus
           sinensis] gi|260586249|gb|ACX45995.1| putative
           eukaryotic translation initiation factor 1 [Citrus
           sinensis]
          Length = 288

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = +3

Query: 354 REV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           REV NP+H+T+ T  +     +K Y+++ LS GDR L AQF+++PLDL  +E
Sbjct: 124 REVPNPVHLTVGTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIE 175


>gb|AAL15890.1|AF417302_1 26S proteasome regulatory subunit S12 isolog-like protein [Castanea
           sativa]
          Length = 197

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 28/55 (50%), Positives = 36/55 (65%)
 Frame = +3

Query: 345 FDPREV*NPIHITLNTSLQTKRHPIKVYIAILLSFGDRPLLAQFKKVPLDL*FLE 509
           F  REV NPIH+T++T        IK Y++  LS GDR L AQF++VPLDL  +E
Sbjct: 42  FYSREVPNPIHLTVDTGFNNGEGTIKAYVSANLSLGDRQLAAQFQEVPLDLRMVE 96


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