BLASTX nr result

ID: Ephedra25_contig00001814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001814
         (1002 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22005.1| unknown [Picea sitchensis]                              73   2e-10
ref|XP_001777586.1| predicted protein [Physcomitrella patens] gi...    60   1e-06

>gb|ABK22005.1| unknown [Picea sitchensis]
          Length = 164

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
 Frame = +3

Query: 378 SDDPKLSGVGKEFQQMVAIATLADFEKQYNTQEMQGTISREVIREVMNTGPAANIHL-RG 554
           S  P LS +GKEF+ MVA ATL++ EK+YNT EM+G I+R+  +EVMN GP+      +G
Sbjct: 77  SSVPDLSKIGKEFETMVARATLSEREKEYNTVEMKGNITRDDFKEVMNIGPSRFAEEGKG 136

Query: 555 QSVIDLEAMLAE 590
           ++VIDL+AML E
Sbjct: 137 ETVIDLQAMLNE 148


>ref|XP_001777586.1| predicted protein [Physcomitrella patens]
           gi|162671071|gb|EDQ57629.1| predicted protein
           [Physcomitrella patens]
          Length = 575

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = +3

Query: 387 PKLSGVGKEFQQMVAIATLADFEKQYNTQEMQGTISREVIREVMNTGP 530
           P ++ VG EF+ MV+ AT+ +FEK+Y+T EMQGTI+R+V+ EVMN  P
Sbjct: 89  PGIANVGAEFENMVSRATMEEFEKEYDTGEMQGTITRDVVAEVMNEMP 136


Top