BLASTX nr result

ID: Ephedra25_contig00001813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001813
         (875 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22005.1| unknown [Picea sitchensis]                              65   4e-08
ref|XP_001777586.1| predicted protein [Physcomitrella patens] gi...    60   8e-07

>gb|ABK22005.1| unknown [Picea sitchensis]
          Length = 164

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -1

Query: 626 SDDPKLSGVGKEFQQMVAIATLADFEKQYNTQEMQGTISREVIREVMNTGPAANIHL-RG 450
           S  P LS +GKEF+ MVA ATL++ EK+YNT EM+G I+R+  +EVMN GP+      +G
Sbjct: 77  SSVPDLSKIGKEFETMVARATLSEREKEYNTVEMKGNITRDDFKEVMNIGPSRFAEEGKG 136

Query: 449 QSVID 435
           ++VID
Sbjct: 137 ETVID 141


>ref|XP_001777586.1| predicted protein [Physcomitrella patens]
           gi|162671071|gb|EDQ57629.1| predicted protein
           [Physcomitrella patens]
          Length = 575

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = -1

Query: 617 PKLSGVGKEFQQMVAIATLADFEKQYNTQEMQGTISREVIREVMNTGP 474
           P ++ VG EF+ MV+ AT+ +FEK+Y+T EMQGTI+R+V+ EVMN  P
Sbjct: 89  PGIANVGAEFENMVSRATMEEFEKEYDTGEMQGTITRDVVAEVMNEMP 136


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