BLASTX nr result
ID: Ephedra25_contig00001777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra25_contig00001777
(678 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABR17514.1| unknown [Picea sitchensis] 81 3e-13
ref|XP_001765228.1| predicted protein [Physcomitrella patens] gi... 67 5e-09
ref|XP_002960125.1| hypothetical protein SELMODRAFT_29371 [Selag... 64 6e-08
ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citr... 61 4e-07
ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloropl... 60 6e-07
ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec... 60 8e-07
gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlise... 59 1e-06
ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea ma... 59 1e-06
ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloropl... 59 2e-06
gb|EMJ00316.1| hypothetical protein PRUPE_ppa020853mg [Prunus pe... 59 2e-06
gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japo... 58 2e-06
ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea ma... 58 2e-06
ref|NP_001068076.1| Os11g0550800 [Oryza sativa Japonica Group] g... 58 2e-06
ref|XP_006852759.1| hypothetical protein AMTR_s00033p00126850 [A... 58 3e-06
ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Caps... 58 3e-06
ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [S... 58 3e-06
ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloropl... 57 4e-06
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab... 57 4e-06
ref|XP_002302374.1| plastid-specific ribosomal family protein [P... 57 4e-06
ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutr... 57 5e-06
>gb|ABR17514.1| unknown [Picea sitchensis]
Length = 137
Score = 81.3 bits (199), Expect = 3e-13
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -1
Query: 675 PTMAPTP---MGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTL 505
P + P P + + R+ I L +ECSSRP+KKATAHH K+RPKKHQPYDKNR+GPT
Sbjct: 27 PMITPMPTVSISIPRAPQRPKISLIIECSSRPRKKATAHHVKTRPKKHQPYDKNRKGPTK 86
Query: 504 YPDQIFPLRRAP 469
YP PL R P
Sbjct: 87 YP----PLPRPP 94
>ref|XP_001765228.1| predicted protein [Physcomitrella patens]
gi|162683547|gb|EDQ69956.1| predicted protein
[Physcomitrella patens]
Length = 315
Score = 67.0 bits (162), Expect = 5e-09
Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Frame = -1
Query: 678 IPTMAPTPMGMLRSTGST-----AIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQG 514
+ ++ TP+ S+ S+ A L++ECSS PQKK+TA H K+RPKK PYDKNRQG
Sbjct: 8 LASLTITPLSSAVSSRSSVSNNGASLLRIECSSHPQKKSTAGHNKTRPKKSNPYDKNRQG 67
Query: 513 PTLY 502
PT+Y
Sbjct: 68 PTVY 71
>ref|XP_002960125.1| hypothetical protein SELMODRAFT_29371 [Selaginella moellendorffii]
gi|302804528|ref|XP_002984016.1| hypothetical protein
SELMODRAFT_19387 [Selaginella moellendorffii]
gi|300148368|gb|EFJ15028.1| hypothetical protein
SELMODRAFT_19387 [Selaginella moellendorffii]
gi|300171064|gb|EFJ37664.1| hypothetical protein
SELMODRAFT_29371 [Selaginella moellendorffii]
Length = 50
Score = 63.5 bits (153), Expect = 6e-08
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -1
Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYPDQIFPLRRAPYLSMALMP 445
+ECSSRPQKKATAHH KSRPKK + YD+ R+GPT YP PL P + L P
Sbjct: 1 IECSSRPQKKATAHHIKSRPKK-KGYDRRRKGPTRYP----PLSERPAIWDILTP 50
>ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citrus clementina]
gi|557535820|gb|ESR46938.1| hypothetical protein
CICLE_v10002778mg [Citrus clementina]
Length = 149
Score = 60.8 bits (146), Expect = 4e-07
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = -1
Query: 678 IPTMAPTPMGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
+P ++ +G+ G + L +E SSRPQKKATAHH K+RP+K QP+D NR+ PT+YP
Sbjct: 52 VPNLSSKKLGV---EGKCNVGLVIENSSRPQKKATAHHMKTRPRKTQPWDVNRK-PTVYP 107
>ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Citrus
sinensis]
Length = 111
Score = 60.1 bits (144), Expect = 6e-07
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -1
Query: 678 IPTMAPTPMGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
+P ++ +GM + L +E SSRPQKKATAHH K+RP+K QP+D NR+ PT+YP
Sbjct: 14 VPNLSSKKLGMEEKCN---VGLVIENSSRPQKKATAHHMKTRPRKTQPWDVNRK-PTVYP 69
>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis]
Length = 126
Score = 59.7 bits (143), Expect = 8e-07
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = -1
Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
L +ECSSRP+KKATAHH K+RPKK QP+D R+ PT+YP
Sbjct: 43 LVIECSSRPKKKATAHHMKTRPKKSQPWDIRRK-PTVYP 80
>gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlisea aurea]
Length = 57
Score = 59.3 bits (142), Expect = 1e-06
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = -1
Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
L +ECSSRP+KKAT HH K+RP+K P D R+GPT YP
Sbjct: 7 LVIECSSRPEKKATKHHMKTRPRKTNPSDIRRRGPTAYP 45
>ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea mays]
gi|195615274|gb|ACG29467.1| plastid-specific ribosomal
protein 6 precursor [Zea mays]
gi|413925596|gb|AFW65528.1| plastid-specific ribosomal
protein 6 [Zea mays]
Length = 121
Score = 59.3 bits (142), Expect = 1e-06
Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Frame = -1
Query: 675 PTMAPTP--------MGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNR 520
P AP+P +G G L VECSSRPQKK T HH K+RPKK QP+D R
Sbjct: 15 PASAPSPARHARHYSVGFSPLHGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKR 74
Query: 519 QGPTLYP 499
+ PT YP
Sbjct: 75 R-PTQYP 80
>ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Setaria
italica]
Length = 117
Score = 58.5 bits (140), Expect = 2e-06
Identities = 36/73 (49%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Frame = -1
Query: 666 APTPMGMLRST-------GSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPT 508
AP P R T G L VECSSRPQKK T HH K+RPKK QP+D R+ PT
Sbjct: 16 APVPARPSRPTVGFPSLLGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR-PT 74
Query: 507 LYPDQIFPLRRAP 469
YP PL + P
Sbjct: 75 QYP----PLPQLP 83
>gb|EMJ00316.1| hypothetical protein PRUPE_ppa020853mg [Prunus persica]
Length = 74
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = -1
Query: 645 LRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
LR + L +ECSSRPQKKATAHH K+RP+K QP+D R+ PT+Y
Sbjct: 22 LRGSVGGGTGLMIECSSRPQKKATAHHRKTRPRKTQPWDVKRK-PTVY 68
>gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japonica Group]
Length = 127
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -1
Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
L VECSSRPQKKAT HH K+RPKK QP+D+ R+ PT Y
Sbjct: 39 LAVECSSRPQKKATKHHMKTRPKKSQPWDRKRR-PTQY 75
>ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea mays]
gi|195642604|gb|ACG40770.1| plastid-specific ribosomal
protein 6 precursor [Zea mays]
Length = 123
Score = 58.2 bits (139), Expect = 2e-06
Identities = 33/69 (47%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Frame = -1
Query: 675 PTMAPTP----------MGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDK 526
P AP P +G G L VECSSRPQKK T HH K+RPKK QP+D
Sbjct: 15 PASAPAPSPARHARHYSVGFSPLHGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDI 74
Query: 525 NRQGPTLYP 499
R+ PT YP
Sbjct: 75 KRR-PTQYP 82
>ref|NP_001068076.1| Os11g0550800 [Oryza sativa Japonica Group]
gi|108864492|gb|ABA94192.2| expressed protein [Oryza
sativa Japonica Group] gi|113645298|dbj|BAF28439.1|
Os11g0550800 [Oryza sativa Japonica Group]
gi|215694720|dbj|BAG89911.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740870|dbj|BAG97026.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 127
Score = 58.2 bits (139), Expect = 2e-06
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = -1
Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
L VECSSRPQKKAT HH K+RPKK QP+D+ R+ PT Y
Sbjct: 39 LAVECSSRPQKKATKHHMKTRPKKSQPWDRKRR-PTQY 75
>ref|XP_006852759.1| hypothetical protein AMTR_s00033p00126850 [Amborella trichopoda]
gi|548856373|gb|ERN14226.1| hypothetical protein
AMTR_s00033p00126850 [Amborella trichopoda]
Length = 97
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -1
Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
VECSSRPQKKAT+HH K+RP+K Q +D R GPT+YP
Sbjct: 33 VECSSRPQKKATSHHMKTRPRKRQAWDIKR-GPTVYP 68
>ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Capsella rubella]
gi|482557644|gb|EOA21836.1| hypothetical protein
CARUB_v10002303mg [Capsella rubella]
Length = 109
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -1
Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
+ECSSRPQKK+TAHH KSRPKK QP+D R+ PT+Y
Sbjct: 39 IECSSRPQKKSTAHHRKSRPKKSQPWDIKRK-PTVY 73
>ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [Sorghum bicolor]
gi|241928066|gb|EES01211.1| hypothetical protein
SORBIDRAFT_03g030290 [Sorghum bicolor]
Length = 123
Score = 57.8 bits (138), Expect = 3e-06
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -1
Query: 633 GSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
G+ L VECSSRPQKK T HH K+RPKK QP+D R+ PT YP
Sbjct: 37 GAGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR-PTQYP 80
>ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Cicer
arietinum]
Length = 103
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/38 (65%), Positives = 33/38 (86%)
Frame = -1
Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
L +ECSSRPQKK+TAHH ++RP+K QP D+NR+ PT+Y
Sbjct: 35 LLIECSSRPQKKSTAHHMQTRPRKSQPSDRNRK-PTVY 71
>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
Length = 108
Score = 57.4 bits (137), Expect = 4e-06
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -1
Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
+ECSSRPQKK+TAHH KSRPKK QP+D R+ PT+Y
Sbjct: 38 IECSSRPQKKSTAHHRKSRPKKTQPWDIKRK-PTVY 72
>ref|XP_002302374.1| plastid-specific ribosomal family protein [Populus trichocarpa]
gi|118486925|gb|ABK95296.1| unknown [Populus
trichocarpa] gi|222844100|gb|EEE81647.1|
plastid-specific ribosomal family protein [Populus
trichocarpa]
Length = 123
Score = 57.4 bits (137), Expect = 4e-06
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = -1
Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
+ +ECSSRPQKKATAHH K+RP+K QP+D R+ PT+Y
Sbjct: 44 MSIECSSRPQKKATAHHRKTRPRKSQPWDIKRK-PTVY 80
>ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum]
gi|557101420|gb|ESQ41783.1| hypothetical protein
EUTSA_v10015071mg [Eutrema salsugineum]
Length = 109
Score = 57.0 bits (136), Expect = 5e-06
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -1
Query: 642 RSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
+S + + +ECSSRPQKK+TAHH K+RPKK QP+D R+ PT+Y
Sbjct: 27 KSGNGGGLGMVIECSSRPQKKSTAHHRKTRPKKTQPWDIKRK-PTVY 72