BLASTX nr result

ID: Ephedra25_contig00001777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001777
         (678 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17514.1| unknown [Picea sitchensis]                              81   3e-13
ref|XP_001765228.1| predicted protein [Physcomitrella patens] gi...    67   5e-09
ref|XP_002960125.1| hypothetical protein SELMODRAFT_29371 [Selag...    64   6e-08
ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citr...    61   4e-07
ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloropl...    60   6e-07
ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec...    60   8e-07
gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlise...    59   1e-06
ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea ma...    59   1e-06
ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloropl...    59   2e-06
gb|EMJ00316.1| hypothetical protein PRUPE_ppa020853mg [Prunus pe...    59   2e-06
gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japo...    58   2e-06
ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea ma...    58   2e-06
ref|NP_001068076.1| Os11g0550800 [Oryza sativa Japonica Group] g...    58   2e-06
ref|XP_006852759.1| hypothetical protein AMTR_s00033p00126850 [A...    58   3e-06
ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Caps...    58   3e-06
ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [S...    58   3e-06
ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloropl...    57   4e-06
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab...    57   4e-06
ref|XP_002302374.1| plastid-specific ribosomal family protein [P...    57   4e-06
ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutr...    57   5e-06

>gb|ABR17514.1| unknown [Picea sitchensis]
          Length = 137

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = -1

Query: 675 PTMAPTP---MGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTL 505
           P + P P   + + R+     I L +ECSSRP+KKATAHH K+RPKKHQPYDKNR+GPT 
Sbjct: 27  PMITPMPTVSISIPRAPQRPKISLIIECSSRPRKKATAHHVKTRPKKHQPYDKNRKGPTK 86

Query: 504 YPDQIFPLRRAP 469
           YP    PL R P
Sbjct: 87  YP----PLPRPP 94


>ref|XP_001765228.1| predicted protein [Physcomitrella patens]
           gi|162683547|gb|EDQ69956.1| predicted protein
           [Physcomitrella patens]
          Length = 315

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 33/64 (51%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
 Frame = -1

Query: 678 IPTMAPTPMGMLRSTGST-----AIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQG 514
           + ++  TP+    S+ S+     A  L++ECSS PQKK+TA H K+RPKK  PYDKNRQG
Sbjct: 8   LASLTITPLSSAVSSRSSVSNNGASLLRIECSSHPQKKSTAGHNKTRPKKSNPYDKNRQG 67

Query: 513 PTLY 502
           PT+Y
Sbjct: 68  PTVY 71


>ref|XP_002960125.1| hypothetical protein SELMODRAFT_29371 [Selaginella moellendorffii]
           gi|302804528|ref|XP_002984016.1| hypothetical protein
           SELMODRAFT_19387 [Selaginella moellendorffii]
           gi|300148368|gb|EFJ15028.1| hypothetical protein
           SELMODRAFT_19387 [Selaginella moellendorffii]
           gi|300171064|gb|EFJ37664.1| hypothetical protein
           SELMODRAFT_29371 [Selaginella moellendorffii]
          Length = 50

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 33/55 (60%), Positives = 38/55 (69%)
 Frame = -1

Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYPDQIFPLRRAPYLSMALMP 445
           +ECSSRPQKKATAHH KSRPKK + YD+ R+GPT YP    PL   P +   L P
Sbjct: 1   IECSSRPQKKATAHHIKSRPKK-KGYDRRRKGPTRYP----PLSERPAIWDILTP 50


>ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citrus clementina]
           gi|557535820|gb|ESR46938.1| hypothetical protein
           CICLE_v10002778mg [Citrus clementina]
          Length = 149

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = -1

Query: 678 IPTMAPTPMGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
           +P ++   +G+    G   + L +E SSRPQKKATAHH K+RP+K QP+D NR+ PT+YP
Sbjct: 52  VPNLSSKKLGV---EGKCNVGLVIENSSRPQKKATAHHMKTRPRKTQPWDVNRK-PTVYP 107


>ref|XP_006472361.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Citrus
           sinensis]
          Length = 111

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = -1

Query: 678 IPTMAPTPMGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
           +P ++   +GM        + L +E SSRPQKKATAHH K+RP+K QP+D NR+ PT+YP
Sbjct: 14  VPNLSSKKLGMEEKCN---VGLVIENSSRPQKKATAHHMKTRPRKTQPWDVNRK-PTVYP 69


>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
           ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis]
          Length = 126

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = -1

Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
           L +ECSSRP+KKATAHH K+RPKK QP+D  R+ PT+YP
Sbjct: 43  LVIECSSRPKKKATAHHMKTRPKKSQPWDIRRK-PTVYP 80


>gb|EPS64597.1| hypothetical protein M569_10187, partial [Genlisea aurea]
          Length = 57

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
           L +ECSSRP+KKAT HH K+RP+K  P D  R+GPT YP
Sbjct: 7   LVIECSSRPEKKATKHHMKTRPRKTNPSDIRRRGPTAYP 45


>ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea mays]
           gi|195615274|gb|ACG29467.1| plastid-specific ribosomal
           protein 6 precursor [Zea mays]
           gi|413925596|gb|AFW65528.1| plastid-specific ribosomal
           protein 6 [Zea mays]
          Length = 121

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
 Frame = -1

Query: 675 PTMAPTP--------MGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNR 520
           P  AP+P        +G     G     L VECSSRPQKK T HH K+RPKK QP+D  R
Sbjct: 15  PASAPSPARHARHYSVGFSPLHGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKR 74

Query: 519 QGPTLYP 499
           + PT YP
Sbjct: 75  R-PTQYP 80


>ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Setaria
           italica]
          Length = 117

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 36/73 (49%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
 Frame = -1

Query: 666 APTPMGMLRST-------GSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPT 508
           AP P    R T       G     L VECSSRPQKK T HH K+RPKK QP+D  R+ PT
Sbjct: 16  APVPARPSRPTVGFPSLLGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR-PT 74

Query: 507 LYPDQIFPLRRAP 469
            YP    PL + P
Sbjct: 75  QYP----PLPQLP 83


>gb|EMJ00316.1| hypothetical protein PRUPE_ppa020853mg [Prunus persica]
          Length = 74

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = -1

Query: 645 LRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           LR +      L +ECSSRPQKKATAHH K+RP+K QP+D  R+ PT+Y
Sbjct: 22  LRGSVGGGTGLMIECSSRPQKKATAHHRKTRPRKTQPWDVKRK-PTVY 68


>gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japonica Group]
          Length = 127

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -1

Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           L VECSSRPQKKAT HH K+RPKK QP+D+ R+ PT Y
Sbjct: 39  LAVECSSRPQKKATKHHMKTRPKKSQPWDRKRR-PTQY 75


>ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea mays]
           gi|195642604|gb|ACG40770.1| plastid-specific ribosomal
           protein 6 precursor [Zea mays]
          Length = 123

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 33/69 (47%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
 Frame = -1

Query: 675 PTMAPTP----------MGMLRSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDK 526
           P  AP P          +G     G     L VECSSRPQKK T HH K+RPKK QP+D 
Sbjct: 15  PASAPAPSPARHARHYSVGFSPLHGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDI 74

Query: 525 NRQGPTLYP 499
            R+ PT YP
Sbjct: 75  KRR-PTQYP 82


>ref|NP_001068076.1| Os11g0550800 [Oryza sativa Japonica Group]
           gi|108864492|gb|ABA94192.2| expressed protein [Oryza
           sativa Japonica Group] gi|113645298|dbj|BAF28439.1|
           Os11g0550800 [Oryza sativa Japonica Group]
           gi|215694720|dbj|BAG89911.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740870|dbj|BAG97026.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 127

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -1

Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           L VECSSRPQKKAT HH K+RPKK QP+D+ R+ PT Y
Sbjct: 39  LAVECSSRPQKKATKHHMKTRPKKSQPWDRKRR-PTQY 75


>ref|XP_006852759.1| hypothetical protein AMTR_s00033p00126850 [Amborella trichopoda]
           gi|548856373|gb|ERN14226.1| hypothetical protein
           AMTR_s00033p00126850 [Amborella trichopoda]
          Length = 97

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -1

Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
           VECSSRPQKKAT+HH K+RP+K Q +D  R GPT+YP
Sbjct: 33  VECSSRPQKKATSHHMKTRPRKRQAWDIKR-GPTVYP 68


>ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Capsella rubella]
           gi|482557644|gb|EOA21836.1| hypothetical protein
           CARUB_v10002303mg [Capsella rubella]
          Length = 109

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -1

Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           +ECSSRPQKK+TAHH KSRPKK QP+D  R+ PT+Y
Sbjct: 39  IECSSRPQKKSTAHHRKSRPKKSQPWDIKRK-PTVY 73


>ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [Sorghum bicolor]
           gi|241928066|gb|EES01211.1| hypothetical protein
           SORBIDRAFT_03g030290 [Sorghum bicolor]
          Length = 123

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = -1

Query: 633 GSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLYP 499
           G+    L VECSSRPQKK T HH K+RPKK QP+D  R+ PT YP
Sbjct: 37  GAGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR-PTQYP 80


>ref|XP_004501081.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Cicer
           arietinum]
          Length = 103

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = -1

Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           L +ECSSRPQKK+TAHH ++RP+K QP D+NR+ PT+Y
Sbjct: 35  LLIECSSRPQKKSTAHHMQTRPRKSQPSDRNRK-PTVY 71


>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
           lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
           ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -1

Query: 609 VECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           +ECSSRPQKK+TAHH KSRPKK QP+D  R+ PT+Y
Sbjct: 38  IECSSRPQKKSTAHHRKSRPKKTQPWDIKRK-PTVY 72


>ref|XP_002302374.1| plastid-specific ribosomal family protein [Populus trichocarpa]
           gi|118486925|gb|ABK95296.1| unknown [Populus
           trichocarpa] gi|222844100|gb|EEE81647.1|
           plastid-specific ribosomal family protein [Populus
           trichocarpa]
          Length = 123

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = -1

Query: 615 LKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           + +ECSSRPQKKATAHH K+RP+K QP+D  R+ PT+Y
Sbjct: 44  MSIECSSRPQKKATAHHRKTRPRKSQPWDIKRK-PTVY 80


>ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum]
           gi|557101420|gb|ESQ41783.1| hypothetical protein
           EUTSA_v10015071mg [Eutrema salsugineum]
          Length = 109

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = -1

Query: 642 RSTGSTAIPLKVECSSRPQKKATAHHAKSRPKKHQPYDKNRQGPTLY 502
           +S     + + +ECSSRPQKK+TAHH K+RPKK QP+D  R+ PT+Y
Sbjct: 27  KSGNGGGLGMVIECSSRPQKKSTAHHRKTRPKKTQPWDIKRK-PTVY 72


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