BLASTX nr result

ID: Ephedra25_contig00001735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001735
         (674 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18099.1| unknown [Picea sitchensis]                             110   5e-22

>gb|ABR18099.1| unknown [Picea sitchensis]
          Length = 902

 Score =  110 bits (274), Expect = 5e-22
 Identities = 83/229 (36%), Positives = 108/229 (47%), Gaps = 36/229 (15%)
 Frame = +3

Query: 3    SKRPTALQLLEHPFIKNVSPLDSFEQI-----------MPHNKWDRNGSAHDGTAVSSPV 149
            ++RP A QLLEH F++N +  DS + +           + H+  ++N +  D T +S  +
Sbjct: 672  AQRPKASQLLEHLFVRNATQQDSSDLLASATSSIKCLSVVHSPREKNINTFDSTGMSPIL 731

Query: 150  Q----KQLHTQSENGHRQTDTSRRLHNPQLSPRSTLESFNSLSPPRSTIISTRGAASTNM 317
                 KQ    SEN   +     R  NPQLSPRSTLE F+SLSPPR   ++T GA     
Sbjct: 732  HSGNGKQHQPLSENCQPKIGIFSRYSNPQLSPRSTLEPFSSLSPPRPAGMATGGAFP--- 788

Query: 318  SNEFTAGGINEVRLTPPRSPNGRSTYGGT---------------RSPLIRTPEGSPRRHE 452
            +N F  G   E  L  PRSP GR   GG                 SP  RTPEGSPRR +
Sbjct: 789  NNGFLTGVTKEGPLPIPRSPRGRDGCGGVLNIASRSEFSSDHNRNSPFTRTPEGSPRRRD 848

Query: 453  SPLDFDIFHATVGNAH------HMRHQDHHYVSRDSAPQSPLRSSPRPA 581
               D D     VG         H R  D   V+R++  Q P+R+S  PA
Sbjct: 849  LMPDIDRKQTNVGRLSHEFEECHNRQHDLSGVARENVLQWPVRTSAYPA 897


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