BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001682
         (741 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein ...   132   2e-28
gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding p...   131   2e-28
sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding pro...   131   2e-28
prf||1615137B chlorophyll a/b binding protein P27                     130   4e-28
gb|ACN40194.1| unknown [Picea sitchensis]                             130   4e-28
gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK213...   130   4e-28
pir||A24039 chlorophyll a/b-binding protein 1A precursor - tomat...   130   5e-28
sp|P14275.1|CB2C_SOLLC RecName: Full=Chlorophyll a-b binding pro...   130   5e-28
emb|CAA27542.1| chlorophyll a/b binding protein (LHCP AB 180) [A...   130   5e-28
ref|NP_564339.1| chlorophyll A/B binding protein 3 [Arabidopsis ...   130   5e-28
ref|XP_004233094.1| PREDICTED: chlorophyll a-b binding protein 1...   130   5e-28
prf||1204205C protein 1C,chlorophyll binding                          130   5e-28
sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding pro...   130   5e-28
emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [So...   130   5e-28
sp|P14584.1|CB21_RAPSA RecName: Full=Chlorophyll a-b binding of ...   130   5e-28
ref|XP_006368026.1| PREDICTED: chlorophyll a-b binding protein 1...   130   5e-28
ref|XP_006365573.1| PREDICTED: chlorophyll a-b binding protein 1...   130   5e-28
ref|XP_006365560.1| PREDICTED: chlorophyll a-b binding protein 1...   130   5e-28
ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3...   130   5e-28
ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3...   130   5e-28

>gb|AAA60965.1| light-harvesting chlorophyll a/b binding protein of photosystem II
           [Ginkgo biloba]
          Length = 270

 Score =  132 bits (331), Expect = 2e-28
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DPDAFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWAFATNF
Sbjct: 207 DPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNF 266

Query: 561 VPGK 550
           VPGK
Sbjct: 267 VPGK 270


>gb|AAB19041.1| type 1 light-harvesting chlorophyll a/b-binding polypeptide,
           partial [Pinus palustris]
          Length = 95

 Score =  131 bits (330), Expect = 2e-28
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DPDAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWA+ATNF
Sbjct: 32  DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 91

Query: 561 VPGK 550
           VPGK
Sbjct: 92  VPGK 95


>sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
           chloroplastic; AltName: Full=Chlorophyll a-b binding
           protein type II 1A; Short=CAB; AltName: Full=LHCP;
           Flags: Precursor gi|20661|emb|CAA32657.1| unnamed
           protein product [Pinus sylvestris]
          Length = 278

 Score =  131 bits (330), Expect = 2e-28
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DPDAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWA+ATNF
Sbjct: 215 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 274

Query: 561 VPGK 550
           VPGK
Sbjct: 275 VPGK 278


>prf||1615137B chlorophyll a/b binding protein P27
          Length = 233

 Score =  130 bits (328), Expect = 4e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DPDAFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGPIENLADH+ADPVNNNAWA+ATNF
Sbjct: 170 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVNNNAWAYATNF 229

Query: 561 VPGK 550
           VPGK
Sbjct: 230 VPGK 233


>gb|ACN40194.1| unknown [Picea sitchensis]
          Length = 274

 Score =  130 bits (328), Expect = 4e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DPDAFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWA+ATNF
Sbjct: 211 DPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 270

Query: 561 VPGK 550
           VPGK
Sbjct: 271 VPGK 274


>gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK21395.1| unknown
           [Picea sitchensis] gi|116790882|gb|ABK25775.1| unknown
           [Picea sitchensis] gi|148908056|gb|ABR17147.1| unknown
           [Picea sitchensis] gi|148908517|gb|ABR17370.1| unknown
           [Picea sitchensis] gi|224284311|gb|ACN39891.1| unknown
           [Picea sitchensis] gi|224284945|gb|ACN40202.1| unknown
           [Picea sitchensis] gi|224285575|gb|ACN40506.1| unknown
           [Picea sitchensis] gi|224285579|gb|ACN40508.1| unknown
           [Picea sitchensis]
          Length = 274

 Score =  130 bits (328), Expect = 4e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DPDAFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWA+ATNF
Sbjct: 211 DPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 270

Query: 561 VPGK 550
           VPGK
Sbjct: 271 VPGK 274


>pir||A24039 chlorophyll a/b-binding protein 1A precursor - tomato  (fragments)
           gi|224926|prf||1204205A protein 1A,chlorophyll binding
          Length = 165

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 102 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 161

Query: 561 VPGK 550
           VPGK
Sbjct: 162 VPGK 165


>sp|P14275.1|CB2C_SOLLC RecName: Full=Chlorophyll a-b binding protein 1C, chloroplastic;
           AltName: Full=LHCII type I CAB-1C; Short=LHCP; Flags:
           Precursor
          Length = 265

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 561 VPGK 550
           VPGK
Sbjct: 262 VPGK 265


>emb|CAA27542.1| chlorophyll a/b binding protein (LHCP AB 180) [Arabidopsis
           thaliana]
          Length = 233

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWAFATNF
Sbjct: 170 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNF 229

Query: 561 VPGK 550
           VPGK
Sbjct: 230 VPGK 233


>ref|NP_564339.1| chlorophyll A/B binding protein 3 [Arabidopsis thaliana]
           gi|18397288|ref|NP_564340.1| chlorophyll A/B-binding
           protein 2 [Arabidopsis thaliana]
           gi|317374860|sp|P0CJ48.1|CB1A_ARATH RecName:
           Full=Chlorophyll a-b binding protein 2, chloroplastic;
           AltName: Full=Chlorophyll a-b protein 165;
           Short=CAB-165; AltName: Full=LHCII type I CAB-2; Flags:
           Precursor gi|317374942|sp|Q8VZ87.2|CB1B_ARATH RecName:
           Full=Chlorophyll a-b binding protein 3, chloroplastic;
           AltName: Full=Chlorophyll a-b protein 180;
           Short=CAB-180; AltName: Full=LHCII type I CAB-3; Flags:
           Precursor gi|9972354|gb|AAG10604.1|AC008030_4
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|9972355|gb|AAG10605.1|AC008030_5 chlorophyll
           a/b-binding protein [Arabidopsis thaliana]
           gi|16368|emb|CAA27540.1| chlorophyll a/b binding protein
           (LHCP AB 65) [Arabidopsis thaliana]
           gi|16372|emb|CAA27541.1| chlorophyll a/b binding protein
           (LHCP AB 180) [Arabidopsis thaliana]
           gi|15529226|gb|AAK97707.1| At1g29920/F1N18_80
           [Arabidopsis thaliana] gi|15809862|gb|AAL06859.1|
           At1g29920/F1N18_80 [Arabidopsis thaliana]
           gi|16974375|gb|AAL31113.1| At1g29920/F1N18_80
           [Arabidopsis thaliana] gi|17065476|gb|AAL32892.1|
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|20148487|gb|AAM10134.1| chlorophyll a/b-binding
           protein [Arabidopsis thaliana]
           gi|21555860|gb|AAM63949.1| photosystem II type I
           chlorophyll a /b binding protein, putative [Arabidopsis
           thaliana] gi|22135932|gb|AAM91548.1| photosystem II type
           I chlorophyll a/b binding protein, putative [Arabidopsis
           thaliana] gi|23397170|gb|AAN31868.1| putative
           photosystem II type I chlorophyll a /b binding protein
           [Arabidopsis thaliana] gi|332193028|gb|AEE31149.1|
           chlorophyll A/B binding protein 3 [Arabidopsis thaliana]
           gi|332193029|gb|AEE31150.1| chlorophyll A/B-binding
           protein 2 [Arabidopsis thaliana]
          Length = 267

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKE+KNGRLAMFSMFGFF QAIVTGKGPIENLADHLADPVNNNAWAFATNF
Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263

Query: 561 VPGK 550
           VPGK
Sbjct: 264 VPGK 267


>ref|XP_004233094.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           isoform 1 [Solanum lycopersicum]
           gi|460374594|ref|XP_004233095.1| PREDICTED: chlorophyll
           a-b binding protein 1B, chloroplastic-like isoform 2
           [Solanum lycopersicum] gi|460374596|ref|XP_004233096.1|
           PREDICTED: chlorophyll a-b binding protein 1B,
           chloroplastic-like isoform 1 [Solanum lycopersicum]
           gi|460374602|ref|XP_004233099.1| PREDICTED: chlorophyll
           a-b binding protein 1B, chloroplastic-like [Solanum
           lycopersicum] gi|460374604|ref|XP_004233100.1|
           PREDICTED: chlorophyll a-b binding protein 1B,
           chloroplastic-like [Solanum lycopersicum]
           gi|115819|sp|P07370.1|CB2B_SOLLC RecName:
           Full=Chlorophyll a-b binding protein 1B, chloroplastic;
           AltName: Full=LHCII type I CAB-1B; Short=LHCP; Flags:
           Precursor gi|170402|gb|AAA34147.1| chlorophyll
           a/b-binding protein Cab-1B [Solanum lycopersicum]
          Length = 265

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 561 VPGK 550
           VPGK
Sbjct: 262 VPGK 265


>prf||1204205C protein 1C,chlorophyll binding
          Length = 165

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 102 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 161

Query: 561 VPGK 550
           VPGK
Sbjct: 162 VPGK 165


>sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
           AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
           Precursor gi|21138|emb|CAA34459.1| unnamed protein
           product [Sinapis alba] gi|21140|emb|CAA33903.1|
           chlorophyll a/b-binding polypeptide [Sinapis alba]
          Length = 266

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 262

Query: 561 VPGK 550
           VPGK
Sbjct: 263 VPGK 266


>emb|CAA78379.1| chlorophyll a/b-binding protein PS II-Type I [Solanum tuberosum]
          Length = 267

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 263

Query: 561 VPGK 550
           VPGK
Sbjct: 264 VPGK 267


>sp|P14584.1|CB21_RAPSA RecName: Full=Chlorophyll a-b binding of LHCII type 1 protein;
           AltName: Full=Chlorophyll a-b binding of LHCII type I
           protein; Short=CAB; Short=LHCP gi|21100|emb|CAA34640.1|
           chlorophyll a/b binding protein (124 AA) [Raphanus
           sativus]
          Length = 124

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 61  DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 120

Query: 561 VPGK 550
           VPGK
Sbjct: 121 VPGK 124


>ref|XP_006368026.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 561 VPGK 550
           VPGK
Sbjct: 262 VPGK 265


>ref|XP_006365573.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           isoform X1 [Solanum tuberosum]
           gi|565400108|ref|XP_006365574.1| PREDICTED: chlorophyll
           a-b binding protein 1B, chloroplastic-like isoform X2
           [Solanum tuberosum]
          Length = 265

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 561 VPGK 550
           VPGK
Sbjct: 262 VPGK 265


>ref|XP_006365560.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 561 VPGK 550
           VPGK
Sbjct: 262 VPGK 265


>ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform X1 [Solanum tuberosum]
           gi|565391644|ref|XP_006361531.1| PREDICTED: chlorophyll
           a-b binding protein 3C, chloroplastic-like isoform X2
           [Solanum tuberosum]
          Length = 267

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 263

Query: 561 VPGK 550
           VPGK
Sbjct: 264 VPGK 267


>ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score =  130 bits (327), Expect = 5e-28
 Identities = 61/64 (95%), Positives = 63/64 (98%)
 Frame = -1

Query: 741 DPDAFAELKVKEIKNGRLAMFSMFGFFTQAIVTGKGPIENLADHLADPVNNNAWAFATNF 562
           DP+AFAELKVKEIKNGRLAMFSMFGFF QAIVTGKGP+ENLADHLADPVNNNAWAFATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 263

Query: 561 VPGK 550
           VPGK
Sbjct: 264 VPGK 267