BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001456
         (2546 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   480   e-132
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      472   e-130
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   450   e-123
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...   446   e-122
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         431   e-118
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]               417   e-114
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...   404   e-109
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   378   e-102
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   374   e-100
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   372   e-100
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   372   e-100
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   368   6e-99
gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   364   9e-98
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       361   1e-96
gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]     358   8e-96
emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcripta...   355   5e-95
emb|CDJ81935.1| RNA-directed DNA polymerase (reverse transcripta...   352   5e-94
emb|CCH50976.1| T4.15 [Malus x robusta]                               350   1e-93
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   339   3e-90
gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]                 337   1e-89

>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
            distachyon]
          Length = 567

 Score =  480 bits (1235), Expect = e-132
 Identities = 215/353 (60%), Positives = 287/353 (81%), Gaps = 1/353 (0%)
 Frame = -2

Query: 2416 DLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFP 2237
            DLHM+FIDLEKAYD++PR+++WW L K  V ++YI +IKDMYD  +T VRT+ G++ +FP
Sbjct: 215  DLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDGDTDDFP 274

Query: 2236 ITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWRE 2057
            I +GLHQGSALSPYLF L+MDE+TR IQ ++P CMLFADD+VLVD++++ VN KLE WR+
Sbjct: 275  IKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 334

Query: 2056 ALETRGFRISRTKTEYMECSFSSRR-STNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVS 1880
             LE++GFR+SRTKTEYM+C FS+       + V L+GQ +P++D FRYLGS+++KDGD+ 
Sbjct: 335  ILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDID 394

Query: 1879 DDVIHRIKAGWIKWRSATGVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKM 1700
            +DV HRIKAGW+KWR A+G+LCD+R+P KLKGKFYRTAIRPA+LYG+ECW TK+++VQ++
Sbjct: 395  EDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQL 454

Query: 1699 GVAEMRMLRWMCGKTRKDKVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRK 1520
            GVAEMRMLRWMCG TR+D+VRN+  R+ VGVAPI +KL ++RLRWFGH++RRPL APV  
Sbjct: 455  GVAEMRMLRWMCGHTRRDRVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPVHS 514

Query: 1519 SDLINIDGSARGRGRPKLTWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
              L       RGRGRP LTW + +++D+    +++E+A+NRA WK  IHV +P
Sbjct: 515  GRLKRAGNVKRGRGRPNLTWEESVKRDLKGWNITKELAMNRAAWKLAIHVPEP 567


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  472 bits (1215), Expect = e-130
 Identities = 226/377 (59%), Positives = 285/377 (75%)
 Frame = -2

Query: 2491 MPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYI 2312
            MPGRST EAI              +DLH+IFIDLEKAYDRVPR+++W  L KKGV   YI
Sbjct: 1    MPGRSTMEAIYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILWKALEKKGVRVAYI 60

Query: 2311 DVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCM 2132
              I+DMYD   T VRT  GES +FPIT+GLHQGS LSPYLF LI+D LT QIQ+  P+CM
Sbjct: 61   RAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCM 120

Query: 2131 LFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYMECSFSSRRSTNGDVVKLE 1952
            LFADDIVL+ E++ ++N +LETWR ALET GFR+SR+K+EYMEC F+ RR +N +V K+ 
Sbjct: 121  LFADDIVLLGESREELNERLETWRRALETHGFRLSRSKSEYMECQFNKRRVSNSEV-KIG 179

Query: 1951 GQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSATGVLCDRRIPVKLKGKFYR 1772
               IP+   F+YLGS+I+ DG++  DV HRI+AGW+KWR A+GVLCD ++P+KLKGKFYR
Sbjct: 180  DHIIPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRKASGVLCDAKVPIKLKGKFYR 239

Query: 1771 TAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKDKVRNEYFREIVGVAPIED 1592
            TA+RP +LYG+ECWA K Q+  K+GVAEMRMLRWMCGKTR+DK+RNE  RE VGVAPI +
Sbjct: 240  TAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVE 299

Query: 1591 KLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKLTWWDIIRKDMISCGLSEE 1412
            K+ ENRLRWFGHV+RRP+ + +R+ D +    + RGRGRPK T  ++I+KD+   GL   
Sbjct: 300  KMVENRLRWFGHVERRPVDSVLRRVDQMERRQTIRGRGRPKKTIREVIKKDLEINGLDRS 359

Query: 1411 IALNRAEWKNRIHVADP 1361
            + L+R  W+  IHVADP
Sbjct: 360  MVLDRTLWRKLIHVADP 376


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
            domestica]
          Length = 622

 Score =  450 bits (1157), Expect = e-123
 Identities = 229/395 (57%), Positives = 279/395 (70%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            IEHRLR ET VS+NQFGFMPGRST EAI              KDLHM+FIDLEKAYDRV 
Sbjct: 258  IEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVS 317

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            RD+IW +L KKGV   YI  IKDMY+GA T VRT  G++  FPITVGLHQGS+LSPYLFA
Sbjct: 318  RDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYLFA 377

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            L+MDELT  IQD++P CMLFA DIVL+DET+  VNAKL  WRE LE++G  +SR+KTEYM
Sbjct: 378  LVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLCLSRSKTEYM 437

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
            EC FS+  S N   V++  QEIPK D FRYLGSI++K+G++ +D+ HRI+AGW+KW+SA+
Sbjct: 438  ECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDEDLNHRIQAGWMKWKSAS 497

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            GVLCDRR+P+KLKGKFYRTAIRPAML                                KD
Sbjct: 498  GVLCDRRMPLKLKGKFYRTAIRPAML--------------------------------KD 525

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            K+RNE  R  VGVA IE K+REN LRWFGHV+RRP  AP+R+ D        +GRGRP+ 
Sbjct: 526  KIRNEDIRGKVGVAEIEGKMRENWLRWFGHVQRRPTDAPIRRCDYGTKVQGRKGRGRPRK 585

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
            T  + +RKD+    L E++  +RA+W+++IHVADP
Sbjct: 586  TLEETLRKDLEYLDLMEDMTQDRAQWRSKIHVADP 620


>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score =  446 bits (1147), Expect = e-122
 Identities = 201/340 (59%), Positives = 273/340 (80%)
 Frame = -2

Query: 2416 DLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFP 2237
            DLHM+FIDLEKAYD++PR+++WW L K  V ++YI +IKDMYD  +T VRT+  ++ +FP
Sbjct: 165  DLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDDFP 224

Query: 2236 ITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWRE 2057
            I +GLHQGSALSPYLFAL+MDE+TR IQ ++P CMLFADD+VLVD++++ VN KLE WR+
Sbjct: 225  IKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQ 284

Query: 2056 ALETRGFRISRTKTEYMECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSD 1877
             LE++GFR+SRTKTEYM C FS+ R    +V  L+GQ +P++D F YLGS++++DG + +
Sbjct: 285  TLESKGFRLSRTKTEYMMCGFSTTRCEEEEV-SLDGQVVPRKDTFWYLGSLLQEDGGIDE 343

Query: 1876 DVIHRIKAGWIKWRSATGVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMG 1697
            DV HRIKAGW+KWR A+G+LCD+R+P KLKGKFYRT +RPAMLYG+ECW TK+++VQ++ 
Sbjct: 344  DVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHVQQLD 403

Query: 1696 VAEMRMLRWMCGKTRKDKVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKS 1517
            VAEM MLR MCG TRKD+VRN+  R+ VGVAPIE+KL ++RLRWFGH++ RP  APV   
Sbjct: 404  VAEMCMLRCMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQHRPPEAPVHSG 463

Query: 1516 DLINIDGSARGRGRPKLTWWDIIRKDMISCGLSEEIALNR 1397
             L   +   RGRGRP LTW + +++D+    +++E+A++R
Sbjct: 464  RLKRAENVKRGRGRPNLTWEESVKRDLKDWSITKELAMDR 503


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  431 bits (1109), Expect = e-118
 Identities = 212/361 (58%), Positives = 264/361 (73%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            IE  LR ET V+ENQFGFM GRS TEAI              +DLHM+FIDLEKAYDRVP
Sbjct: 148  IERGLRKETQVTENQFGFMSGRSITEAIYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVP 207

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R+++W VL K  V   YI  IKDMYDGA T V+T  G + EFPI +GLHQGS+LSPYLF 
Sbjct: 208  REVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFT 267

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            ++++ LT  IQ+ VP C+LFADDIVL+ E +  +N KLE W+EALE  G RISR+KTEYM
Sbjct: 268  IVLEVLTEHIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEVYGLRISRSKTEYM 327

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
            EC FS RR      V++    + K  +F+YLG II+ +G++  DV HRI+AGW KWRSA+
Sbjct: 328  ECKFSLRRENTNIEVEIGENILRKVKSFKYLGCIIQDNGEIEQDVNHRIQAGWSKWRSAS 387

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            G +CD+++P+KLKGKFYRTAIRPAMLYG+EC A K ++  K+ VAE++MLRWM G TR D
Sbjct: 388  GFICDKKVPLKLKGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAEVKMLRWMSGHTRLD 447

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            K+RNE  RE VGVAPI +K+ E+RLRWFGHV+RRP+  PVR+ D +     A+GRGRPK 
Sbjct: 448  KIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRRPIEHPVRRVDEMEDGQRAKGRGRPKK 507

Query: 1465 T 1463
            T
Sbjct: 508  T 508


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score =  417 bits (1073), Expect = e-114
 Identities = 191/313 (61%), Positives = 243/313 (77%)
 Frame = -2

Query: 2302 KDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFA 2123
            KDMYDGA T VRT  G+S  FP+ +GLHQGS LSP+LFAL+MDELTR IQ+ VP CMLFA
Sbjct: 379  KDMYDGAKTRVRTVGGDSEHFPVEIGLHQGSVLSPFLFALVMDELTRSIQETVPWCMLFA 438

Query: 2122 DDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYMECSFSSRRSTNGDVVKLEGQE 1943
            DDIVL+DET+ +VNA+LE WR+ LE++GFR+SRTKTEY+ C FS         V+L  Q 
Sbjct: 439  DDIVLIDETRDRVNARLEVWRQTLESKGFRLSRTKTEYLGCKFSDGLDETDVEVRLAAQV 498

Query: 1942 IPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSATGVLCDRRIPVKLKGKFYRTAI 1763
            IPK+++FRYLG++I+  GD+ DDV HR+ A W+KWR A+GVLCD++I  KLKGKFYR  +
Sbjct: 499  IPKKESFRYLGAVIQGSGDIDDDVTHRVGAAWMKWRLASGVLCDKKISPKLKGKFYRVVV 558

Query: 1762 RPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKDKVRNEYFREIVGVAPIEDKLR 1583
            RPA+LYG+ECW  K  +V KM VAEMRMLRWMCG TR DK+RNE  RE VGVA + DKLR
Sbjct: 559  RPALLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLR 618

Query: 1582 ENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKLTWWDIIRKDMISCGLSEEIAL 1403
            E RLRWFGHVKRR   APVR+ +++ ++G+ RGRGRPK  W ++IR+D+    ++E++ L
Sbjct: 619  EARLRWFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTL 678

Query: 1402 NRAEWKNRIHVAD 1364
            +R EW++RI V D
Sbjct: 679  DRKEWRSRIKVED 691


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
            jockey-like [Brachypodium distachyon]
          Length = 307

 Score =  404 bits (1037), Expect = e-109
 Identities = 182/303 (60%), Positives = 243/303 (80%), Gaps = 1/303 (0%)
 Frame = -2

Query: 2266 TTAGESREFPITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETKSK 2087
            T+ G++ +FPI +GLHQGSALSP LF L+MDE+TR IQ ++P CMLFADD+VLVD++++ 
Sbjct: 5    TSDGDTDDFPIKIGLHQGSALSPCLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTG 64

Query: 2086 VNAKLETWREALETRGFRISRTKTEYMECSFSSRR-STNGDVVKLEGQEIPKRDNFRYLG 1910
            VN KLE WR+ LE++GFR+SRTKTEYM+C FS+       + V L+GQ +P++D FRYLG
Sbjct: 65   VNRKLELWRQTLESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLG 124

Query: 1909 SIIRKDGDVSDDVIHRIKAGWIKWRSATGVLCDRRIPVKLKGKFYRTAIRPAMLYGSECW 1730
            S+++KDGD+ +DV HRIKAGW+KWR A+G+LCD+R+P KLKGKFYRTAIRPA+LYG+ECW
Sbjct: 125  SMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAIRPAILYGAECW 184

Query: 1729 ATKKQNVQKMGVAEMRMLRWMCGKTRKDKVRNEYFREIVGVAPIEDKLRENRLRWFGHVK 1550
             TK+++VQ++GVAEMRMLRWMCG TR+D VRN+  R+ VGVAPI +KL ++RLRWFGH++
Sbjct: 185  PTKRRHVQQLGVAEMRMLRWMCGHTRRDHVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQ 244

Query: 1549 RRPLSAPVRKSDLINIDGSARGRGRPKLTWWDIIRKDMISCGLSEEIALNRAEWKNRIHV 1370
            RRPL APV    L       RGRGRP LTW + +++D+    +++E+A+NR  WK  IHV
Sbjct: 245  RRPLDAPVHSGRLKRAGNVKRGRGRPNLTWEESVKRDLKGWNITKELAMNRTAWKLAIHV 304

Query: 1369 ADP 1361
             +P
Sbjct: 305  TEP 307


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  378 bits (970), Expect = e-102
 Identities = 184/333 (55%), Positives = 239/333 (71%)
 Frame = -2

Query: 2395 DLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQ 2216
            ++EK   R     +W VL K+ V   YI  IKDMY+GA T V+T  G + EFPI +GLHQ
Sbjct: 1056 EVEKRDTRYQGRFLWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEFPIGIGLHQ 1115

Query: 2215 GSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGF 2036
            GS+LSPYLF L+++ LT  IQ+ VP CMLFADDIVL+ E++  +N KLE WREALE  G 
Sbjct: 1116 GSSLSPYLFTLVLEVLTEHIQEPVPWCMLFADDIVLMGESREDLNKKLELWREALEVYGL 1175

Query: 2035 RISRTKTEYMECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIK 1856
            RISR+KTEYMEC FS RR  +   VK+    + K  +F+YLG II+ +G++  DV HRI+
Sbjct: 1176 RISRSKTEYMECKFSLRRENSNIEVKIGENILRKVKSFKYLGCIIQDNGEIEQDVNHRIQ 1235

Query: 1855 AGWIKWRSATGVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRML 1676
            AGW KWRSA+G +CD+++P+KLKGKFYRTAIRPAMLYG+ECWA K ++  K+ VAEM+ML
Sbjct: 1236 AGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECWAAKGEHEHKLSVAEMKML 1295

Query: 1675 RWMCGKTRKDKVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDG 1496
            RWM G TR DK+RNE  RE VGVAPI +K+ E+RLRWFGHV RRP+   VR+ D +    
Sbjct: 1296 RWMSGHTRLDKIRNEDIRERVGVAPIVEKMVESRLRWFGHVGRRPIEHLVRRVDEMEDGQ 1355

Query: 1495 SARGRGRPKLTWWDIIRKDMISCGLSEEIALNR 1397
             A+GRGRPK T  +++++D+        I L++
Sbjct: 1356 KAKGRGRPKKTIHEVVKRDLHETEAIHSIVLHK 1388


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  374 bits (959), Expect = e-100
 Identities = 180/395 (45%), Positives = 252/395 (63%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            I+ RLR E  VSE+Q+GF PG  T +AI              + LH+ F+DL+KA+D VP
Sbjct: 597  IDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLMEAYREKRRALHVAFLDLQKAFDCVP 656

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R  IWW L  KG+   YI++I+ MY  + ++VRT  G++R FPITVG+HQGSALSP+LF 
Sbjct: 657  RQCIWWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRPFPITVGVHQGSALSPFLFN 716

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            +++D ++  IQD+ P  M++ADDI L+ E +  +  K+  W+  LE  G +++ +KTEYM
Sbjct: 717  VVLDTVSAHIQDQPPWLMMYADDIALIAENRLTLERKVNLWKGTLENGGLKLNVSKTEYM 776

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
             C      S +   + +  +   K + FRYLGS++ + G +  DV  RI A W KWR  T
Sbjct: 777  ACG-----SRDSSTILIGPEPAVKSEKFRYLGSVMHESGGIDHDVHGRISAAWAKWREVT 831

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            GV+CDRRIP KLKG  Y++ +RP +LYGSECW    ++ Q++ V EM+MLRWMCG TR D
Sbjct: 832  GVVCDRRIPPKLKGLIYKSIVRPVLLYGSECWPALSRHTQELHVTEMKMLRWMCGVTRSD 891

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            ++RN + R  +GV  + DKL+E RLRWFGHV RRP +   RK   I + G AR  GRP+ 
Sbjct: 892  RIRNTFIRGSLGVRDVADKLQERRLRWFGHVTRRPKNYVGRKCLAILVPG-ARPPGRPRK 950

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
             W D++ +DM + GL+ E A +RA+W      ADP
Sbjct: 951  RWLDVVMQDMRANGLTTEDAKDRAKWSRLSRKADP 985


>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 472

 Score =  372 bits (956), Expect = e-100
 Identities = 180/395 (45%), Positives = 258/395 (65%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            I+ RLR E  VSE Q+GF PG  T +AI              + LH+ F+DL+KA+D VP
Sbjct: 83   IDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVP 142

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R  IWW L  KG+   YID+I+DMY  ++++VRT  G+++ FPI+VGLHQGSALSP+LF 
Sbjct: 143  RQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFN 202

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            +++D ++  IQD+ P  M++ADDI L+DE++  +  ++  W+  LE  G +++ TKTEYM
Sbjct: 203  VVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYM 262

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
             C      S +   + +  +   K + FRYLGSI+ + G +  DV  RI A W KWR  T
Sbjct: 263  ACG-----SPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWRDVT 317

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            GV+CDRRIP KLKG  Y++ IRP +LYGSECW T  ++ Q++ V EM+MLRWMCG TR D
Sbjct: 318  GVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRAD 377

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            ++RN + R  +GV  + DKL+E+RLRW+GHV RRP +   +    +++ G AR  GRP+ 
Sbjct: 378  RIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRPRK 436

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
             W D +++DM + GL+   A +RA+W++    ADP
Sbjct: 437  RWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADP 471


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  372 bits (956), Expect = e-100
 Identities = 180/395 (45%), Positives = 258/395 (65%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            I+ RLR E  VSE Q+GF PG  T +AI              + LH+ F+DL+KA+D VP
Sbjct: 596  IDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVP 655

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R  IWW L  KG+   YID+I+DMY  ++++VRT  G+++ FPI+VGLHQGSALSP+LF 
Sbjct: 656  RQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFN 715

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            +++D ++  IQD+ P  M++ADDI L+DE++  +  ++  W+  LE  G +++ TKTEYM
Sbjct: 716  VVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYM 775

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
             C      S +   + +  +   K + FRYLGSI+ + G +  DV  RI A W KWR  T
Sbjct: 776  ACG-----SPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWREVT 830

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            GV+CDRRIP KLKG  Y++ IRP +LYGSECW T  ++ Q++ V EM+MLRWMCG TR D
Sbjct: 831  GVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRAD 890

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            ++RN + R  +GV  + DKL+E+RLRW+GHV RRP +   +    +++ G AR  GRP+ 
Sbjct: 891  RIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRPRK 949

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
             W D +++DM + GL+   A +RA+W++    ADP
Sbjct: 950  RWLDTVKQDMRANGLTTADAKDRAKWRSLSRKADP 984


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  368 bits (945), Expect = 6e-99
 Identities = 177/388 (45%), Positives = 255/388 (65%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            I+ RLR E  VSE Q+GF PG  T +AI              + LH+ F+DL+KA+D VP
Sbjct: 864  IDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVP 923

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R  IWW L  KG+   YID+I+DMY  ++++VRT  G+++ FPI+VGLHQGSALSP+LF 
Sbjct: 924  RQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFN 983

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            +++D ++  IQD+ P  M++ADDI L+DE++  +  ++  W+  LE  G +++ TKTEYM
Sbjct: 984  VVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYM 1043

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
             C      S +   + +  +   K + FRYLGSI+ + G +  DV  RI A W KWR  T
Sbjct: 1044 ACG-----SPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWRDVT 1098

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            GV+CDRRIP KLKG  Y++ IRP +LYGSECW T  ++ Q++ V EM+MLRWMCG TR D
Sbjct: 1099 GVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRAD 1158

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            ++RN + R  +GV  + DKL+E+RLRW+GHV RRP +   +    +++ G AR  GRP+ 
Sbjct: 1159 RIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRPRK 1217

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKN 1382
             W D +++DM + GL+   A +RA+W++
Sbjct: 1218 RWLDTVKQDMRANGLTTADAKDRAKWRS 1245


>gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 601

 Score =  364 bits (935), Expect = 9e-98
 Identities = 177/393 (45%), Positives = 256/393 (65%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            I+ RLR E  VSE Q+GF PG  T +AI              + LH+ F+DL+KA+D VP
Sbjct: 43   IDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKRRALHVAFLDLQKAFDCVP 102

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R  IWW L  KG+   YID+I+DMY  ++++VRT  G+++ FPI+VGLHQGSALSP+LF 
Sbjct: 103  RQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFN 162

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            +++D ++  IQD+ P  M++ADDI L+DE++  +  ++  W+  LE  G +++ TKTEYM
Sbjct: 163  VVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYM 222

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
             C      S +   + +  +   K + FRYLGSI+ + G +  DV  RI A W KWR  T
Sbjct: 223  ACG-----SPDSCTIHIGPEPAVKSEKFRYLGSILHESGGIDHDVQARISAAWAKWRDVT 277

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            GV+CDRRIP KLKG  Y++ IRP +LYGSECW T  ++ Q++ V EM+MLRWMCG TR D
Sbjct: 278  GVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVTEMKMLRWMCGVTRAD 337

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            ++RN + R  +GV  + DKL+E+RLRW+GHV RRP +   +    +++ G AR  GRP+ 
Sbjct: 338  RIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPENYVGKICLDMSVPG-ARPPGRPRK 396

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVA 1367
             W D +++DM + GL+   A +RA+++  +  A
Sbjct: 397  RWLDTVKQDMRANGLTTADAKDRAKYERLLRRA 429


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  361 bits (926), Expect = 1e-96
 Identities = 170/395 (43%), Positives = 255/395 (64%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            I+ RLR E ++S+N +GF+ G STT+ +              + L++ F+D+EKA+DRVP
Sbjct: 599  IDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIAEEYREKLRPLYVAFLDMEKAFDRVP 658

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            RD IWW L KK V   Y++VI DMY  A ++VRT  G+++   +  GLHQGS LSP+LF 
Sbjct: 659  RDTIWWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQTKPIAVAEGLHQGSVLSPFLFG 718

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            +++D LT   Q       ++ADD+ +  E+++K+   L  W++ L+  G  +S  KT YM
Sbjct: 719  MVIDSLTEVAQSSASWTFIYADDVAICTESRTKLREALLLWKQQLQAGGLILSVAKTHYM 778

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
              SF+     +   + ++GQ +   D ++YLG+++ + G++  ++ HRI A W+KWR  +
Sbjct: 779  --SFNDPDPGDNSPISIDGQLVNMCDQYKYLGTMMHRSGNLKCNIQHRIAAAWLKWREVS 836

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            GV CDRR+PVKLKG  Y+T IRP ++YGSE WA  K+NV  + VAEM+MLRWMCG TR D
Sbjct: 837  GVTCDRRMPVKLKGMIYKTIIRPVLMYGSETWAATKRNVHTIQVAEMKMLRWMCGVTRLD 896

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            K+RNEY R  +GV  I DK++E+RLRW+GHVKR+        + L+++ G  R RGRPK 
Sbjct: 897  KIRNEYVRGSLGVRDIADKMQESRLRWYGHVKRKQPDYVGNLALLLDLPG-RRPRGRPKT 955

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
             W D++ KD   C +++E   +RA+W++++  ADP
Sbjct: 956  RWRDVVLKDKRECNVADEDVEDRAKWRSKVRKADP 990


>gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]
          Length = 747

 Score =  358 bits (918), Expect = 8e-96
 Identities = 170/342 (49%), Positives = 233/342 (68%)
 Frame = -2

Query: 2416 DLHMIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFP 2237
            DLHM+FIDLEKAYD++P++ +WW L K  V ++YI +IKDMYD  +T VRT+  ++ +F 
Sbjct: 20   DLHMVFIDLEKAYDKIPQNGMWWALEKHKVPTKYITLIKDMYDNVLTSVRTSDVDTDDFL 79

Query: 2236 ITVGLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWRE 2057
            I      G              +TR I +++P CMLF DD+VLVD++++ VN KLE WR+
Sbjct: 80   IKDRTASG--------------VTRDIHEDIPWCMLFVDDVVLVDDSRTGVNRKLELWRQ 125

Query: 2056 ALETRGFRISRTKTEYMECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSD 1877
             LE++GFR+SRTKTEYM C FS+ R                            +DG + +
Sbjct: 126  TLESKGFRLSRTKTEYMMCGFSTTRCEE------------------------EEDGGIDE 161

Query: 1876 DVIHRIKAGWIKWRSATGVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMG 1697
            DV HRIKAGW+KWR A G+LCD+R+P KLKGKFYR  +RPAMLYG+ECW TK+++VQ++G
Sbjct: 162  DVNHRIKAGWMKWRQAFGILCDKRVPQKLKGKFYRMTVRPAMLYGAECWLTKRRHVQQLG 221

Query: 1696 VAEMRMLRWMCGKTRKDKVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKS 1517
            VAEMR+LRWMCG TRKD+VRN+  R+ VGVAPI +KL  +RLRWFGH++RRPL AP    
Sbjct: 222  VAEMRVLRWMCGHTRKDRVRNDDIRDRVGVAPIAEKLCPHRLRWFGHIQRRPLEAPGHSG 281

Query: 1516 DLINIDGSARGRGRPKLTWWDIIRKDMISCGLSEEIALNRAE 1391
             L + +   RGRGRP LTW + + +D+    +++E+A++R +
Sbjct: 282  RLKHAENVKRGRGRPNLTWEEAVNRDLKDWSITKELAMDRVK 323


>emb|CDJ92648.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 479

 Score =  355 bits (911), Expect = 5e-95
 Identities = 180/395 (45%), Positives = 247/395 (62%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            ++ RLR    +S+ QFGFMP RSTT+AI              +  ++ F+DLEKA+DR+P
Sbjct: 86   VDSRLRELVPISQKQFGFMPERSTTDAIFIARQVMEKYREKRRPCYIAFLDLEKAFDRLP 145

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R ++W  L K+ V    I ++KDMYDG+ T +RT  G++    +TVG+HQGSALSP+LF 
Sbjct: 146  RQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQGSALSPFLFL 205

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            L MD +T ++ D   + +L+ADDI L+ E+K ++  KL+ W+  L   G R++  KT+++
Sbjct: 206  LTMDVITEELMDGPLKTILYADDIALIAESKDELQDKLQNWQRVLAESGLRLNVKKTKFL 265

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
                SS   T   +V   G+ I K  +FRYLGS +  DG V   V  RI A W+KWR +T
Sbjct: 266  ----SSEEGTES-IVDGRGEAIEKVQDFRYLGSDLAADGSVDQAVKSRINAAWMKWREST 320

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            G+LCDRR    LKGK YRT +RP MLYGSECW   K +  ++  AEMRMLRW CG TR D
Sbjct: 321  GILCDRRCSRTLKGKVYRTVVRPTMLYGSECWPVSKSHEGQLHSAEMRMLRWACGWTRLD 380

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            +VRNE  R  +  API+ K+RE RLRWFGHV RRP S P+R++      G  R RG PK 
Sbjct: 381  RVRNEDVRTAMQTAPIQLKMREQRLRWFGHVLRRPQSHPIREAMEFEAQGK-RPRGAPKK 439

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
             W D+I+KD+    ++ E A++R +W+     ADP
Sbjct: 440  RWRDVIKKDLAETKVTAEDAVDRMKWRRLTRTADP 474


>emb|CDJ81935.1| RNA-directed DNA polymerase (reverse transcriptase) domain containing
            protein [Haemonchus contortus]
          Length = 401

 Score =  352 bits (903), Expect = 5e-94
 Identities = 179/395 (45%), Positives = 246/395 (62%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            ++ RLR    +S+ QFGFMP RSTT+AI              +  ++ F+DLEKA+DR+P
Sbjct: 8    VDSRLRELVPISQKQFGFMPERSTTDAIFIARQVMEKYREKRRPCYIAFLDLEKAFDRLP 67

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R ++W  L K+ V    I ++KDMYDG+ T +RT  G++    +TVG+HQGSALSP+LF 
Sbjct: 68   RQVLWRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQGSALSPFLFL 127

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            L MD +T ++ D   + +L+ADDI L+ E+K ++  KL+ W+  L   G R++  KT+++
Sbjct: 128  LTMDVITEELMDGPLKTILYADDIALIAESKDELQDKLQNWQRVLAESGLRLNVKKTKFL 187

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
                SS   T   +V   G+ I K  +FRYLGS +  DG V   V  RI A W+KWR +T
Sbjct: 188  ----SSEEGTES-IVDGRGEAIEKVQDFRYLGSDLAADGSVDQAVKSRINAAWMKWREST 242

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKD 1646
            G+LCDRR    LKGK YR  +RP MLYGSECW   K +  ++  AEMRMLRW CG TR D
Sbjct: 243  GILCDRRCSRTLKGKVYRAVVRPTMLYGSECWPVSKFHEGQLHSAEMRMLRWACGWTRLD 302

Query: 1645 KVRNEYFREIVGVAPIEDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKL 1466
            +VRNE  R  +  API+ K+RE RLRWFGHV RRP S P+R++      G  R RG PK 
Sbjct: 303  RVRNEDVRTAMQTAPIQLKMREQRLRWFGHVLRRPQSHPIREAMEFEAQGK-RPRGAPKK 361

Query: 1465 TWWDIIRKDMISCGLSEEIALNRAEWKNRIHVADP 1361
             W D+I+KD+    ++ E A++R +W+     ADP
Sbjct: 362  RWRDVIKKDLAETKVTAEDAVDRMKWRRLTRTADP 396


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  350 bits (899), Expect = 1e-93
 Identities = 163/259 (62%), Positives = 207/259 (79%)
 Frame = -2

Query: 2137 CMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYMECSFSSRRSTNGDVVK 1958
            CMLFADDIVL+DET+  VNAKL  WRE LE++G R+SR+KTEYMEC FS+    N   V+
Sbjct: 726  CMLFADDIVLIDETQEGVNAKLNLWREVLESKGLRLSRSKTEYMECKFSANGGQNELGVR 785

Query: 1957 LEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSATGVLCDRRIPVKLKGKF 1778
            +  QEIPK D FRYLGSI++K+G++  D+ HRI+AGW+KW+SA+GVLCDRR+P+KLKGKF
Sbjct: 786  IGDQEIPKSDRFRYLGSILQKNGELDGDLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKF 845

Query: 1777 YRTAIRPAMLYGSECWATKKQNVQKMGVAEMRMLRWMCGKTRKDKVRNEYFREIVGVAPI 1598
            YRTAIRPAMLYG+ECWA K Q+V KMGVAEMRMLRWMCG TRKDK+RNE  R  VGVA I
Sbjct: 846  YRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEI 905

Query: 1597 EDKLRENRLRWFGHVKRRPLSAPVRKSDLINIDGSARGRGRPKLTWWDIIRKDMISCGLS 1418
            + K+REN+LRWFGHV+RRP  AP+R+ D        RGRGRP+ T  + +RKD+    L+
Sbjct: 906  QGKMRENQLRWFGHVQRRPTDAPIRRCDYGTEVQGRRGRGRPRKTLEETLRKDLEYLDLT 965

Query: 1417 EEIALNRAEWKNRIHVADP 1361
            +++  +RA+W+++IH+ADP
Sbjct: 966  KDMTQDRAQWRSKIHIADP 984



 Score = 98.6 bits (244), Expect = 1e-17
 Identities = 48/72 (66%), Positives = 53/72 (73%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            IEHRLR ET VS+NQFGFMPGRST EAI              KDLHM+FIDLEKAYDRVP
Sbjct: 654  IEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVP 713

Query: 2365 RDLIWWVLNKKG 2330
            RD++W +L KKG
Sbjct: 714  RDILWRILEKKG 725


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 517

 Score =  339 bits (870), Expect = 3e-90
 Identities = 160/278 (57%), Positives = 207/278 (74%)
 Frame = -2

Query: 2545 IEHRLRMETNVSENQFGFMPGRSTTEAIXXXXXXXXXXXXXXKDLHMIFIDLEKAYDRVP 2366
            I+ RLR ET V++NQFGFM GRST EAI              KDLH++F DLEK YDRVP
Sbjct: 236  IKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVP 295

Query: 2365 RDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITVGLHQGSALSPYLFA 2186
            R+++W  L KK V   YI  IKDMY+ A T V+T  G + +FPIT+GLHQGS L+PYLF 
Sbjct: 296  REILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLHQGSTLTPYLFT 355

Query: 2185 LIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALETRGFRISRTKTEYM 2006
            L++D LT  IQ+  P+CMLFADD+VLV E++ +VN +LETWR+ALE  GFR+SR+KT+YM
Sbjct: 356  LVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETWRQALEAYGFRLSRSKTKYM 415

Query: 2005 ECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVIHRIKAGWIKWRSAT 1826
            EC+FS RRS +   VK+    IP+   F+YLGS ++ DG++  DV HRI+AGW+KWR A+
Sbjct: 416  ECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEIEADVSHRIQAGWLKWRRAS 475

Query: 1825 GVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQN 1712
             VLCD+++P+KL GKFYRTA+RPA+LYG+ECWA K Q+
Sbjct: 476  SVLCDKKVPLKLTGKFYRTAVRPALLYGTECWAVKSQH 513


>gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]
          Length = 1059

 Score =  337 bits (865), Expect = 1e-89
 Identities = 164/273 (60%), Positives = 200/273 (73%)
 Frame = -2

Query: 2407 MIFIDLEKAYDRVPRDLIWWVLNKKGVTSRYIDVIKDMYDGAMTIVRTTAGESREFPITV 2228
            M+FIDLEKAYDR           K+GV  RYI VIKDMYDGA+  VR   G   EFPI +
Sbjct: 1    MVFIDLEKAYDRA---------EKRGVHMRYIKVIKDMYDGAVASVRIIGGYMEEFPIRI 51

Query: 2227 GLHQGSALSPYLFALIMDELTRQIQDEVPQCMLFADDIVLVDETKSKVNAKLETWREALE 2048
            GLHQGSALS YLF +++DELTR+IQD +P CMLFADDIVLVDE    +N KLE WR+ LE
Sbjct: 52   GLHQGSALSLYLFTIVIDELTREIQDGIPWCMLFADDIVLVDEHWEGINRKLERWRQTLE 111

Query: 2047 TRGFRISRTKTEYMECSFSSRRSTNGDVVKLEGQEIPKRDNFRYLGSIIRKDGDVSDDVI 1868
             +GF++SR K EYM C F + R  + D + L+G  I     FRYLGSI++ +GD+ +D+ 
Sbjct: 112  AQGFKLSRIKIEYMHCRFGNLRDQS-DGISLDGVVIGASRKFRYLGSIVQCEGDIDEDIG 170

Query: 1867 HRIKAGWIKWRSATGVLCDRRIPVKLKGKFYRTAIRPAMLYGSECWATKKQNVQKMGVAE 1688
            H+I  GW+KW++ TG LCD ++P+KLKGKFYRTAIRP+MLYGSECWA K+Q + KM VAE
Sbjct: 171  HKINTGWVKWKNVTGGLCDNKMPIKLKGKFYRTAIRPSMLYGSECWAIKRQQIYKMSVAE 230

Query: 1687 MRMLRWMCGKTRKDKVRNEYFREIVGVAPIEDK 1589
            MRMLRWM G  R D++RNE  R  VGVAPIEDK
Sbjct: 231  MRMLRWMNGYMRMDRIRNEVIRSKVGVAPIEDK 263