BLASTX nr result

ID: Ephedra25_contig00001202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra25_contig00001202
         (823 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18463.1| unknown [Picea sitchensis]                             136   8e-30
gb|ABK21940.1| unknown [Picea sitchensis]                             106   1e-20

>gb|ABR18463.1| unknown [Picea sitchensis]
          Length = 407

 Score =  136 bits (343), Expect = 8e-30
 Identities = 97/231 (41%), Positives = 113/231 (48%), Gaps = 33/231 (14%)
 Frame = +1

Query: 229 ARGPRVRPDWEAFPPV----------------------DCPATAFTHAVSGFS------R 324
           ARGPR  PDW+A   +                      D PA AF +AVSG+S       
Sbjct: 182 ARGPRAMPDWDALVKISAAAANENSSHCNGTGGAAVVTDDPAAAFCNAVSGWSSQQHHHH 241

Query: 325 YPFLSAPASPAPHGHGRDQSSRPPVLDLSGAAMDNTKGRWIGGVRVPA-----MGPSSPT 489
           YPFLSAP SPAPH H R    R P LDLS A +DNTKGRW+GGVRV A     MGPSSPT
Sbjct: 242 YPFLSAPPSPAPHSHSR----REP-LDLSNATVDNTKGRWLGGVRVSASASASMGPSSPT 296

Query: 490 FSLLTPAAQLEHTAAAAYRERDRSPNXXXXXXXXXXXXXXXPGSPMWTXXXXXXXXXXXX 669
           FSLL+PAAQLEH+        +RS                   SP  T            
Sbjct: 297 FSLLSPAAQLEHSLGG-----ERSHFFVPADSRLWTPVGSAMSSPCRTPATGG------- 344

Query: 670 XXXXXXXXXXLAIPPVASGSANVIDDFRFELGNANVKPWEGERIHEECAGE 822
                      A+  VA+      D+F+FE G  +VKPW+GERIHEEC G+
Sbjct: 345 -----------AVVRVAAA-----DEFQFECG--SVKPWQGERIHEECGGD 377


>gb|ABK21940.1| unknown [Picea sitchensis]
          Length = 367

 Score =  106 bits (264), Expect = 1e-20
 Identities = 76/208 (36%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
 Frame = +1

Query: 232 RGPRVRPDWEAFPPV------DCPATAFTHAVSGFSRYPFL--SAPASPAPHGHGRDQSS 387
           RG R + DW+A          DCP + F+  VS +S YPF+  S PASP  H     Q  
Sbjct: 170 RGARAKLDWDAMVKAVANESNDCPNSGFSTPVSPWSNYPFVASSTPASPGRHAEMATQ-- 227

Query: 388 RPPVLDLSGAAMDNTKGRWIGGVRV---PAMGPSSPTFSLLTPAAQLEHTAAAAYRERDR 558
                 LS A +D  KGRW+GG+R+   P+ GPSSPTF+LLTPAAQL+H  A        
Sbjct: 228 ------LSNAVVD--KGRWMGGIRMMAFPSAGPSSPTFNLLTPAAQLQHGLAT------- 272

Query: 559 SPNXXXXXXXXXXXXXXXPGSPMWTXXXXXXXXXXXXXXXXXXXXXXLAIPPVASGSANV 738
                              G  +WT                        +PP   G  + 
Sbjct: 273 ------------------EGGRLWTPGQSGVSSPCNNRAGEEER----LLPPFQEG-MDA 309

Query: 739 IDDFRFELGNANVKPWEGERIHEECAGE 822
            D+F F  G+  VKPW+GERIHEEC GE
Sbjct: 310 SDEFAF--GSVAVKPWQGERIHEECGGE 335


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